BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00016875
         (1416 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY16376.1| ATPase family associated with various cellular ac...   574   e-161
ref|XP_004250308.1| PREDICTED: replication factor C subunit 4-li...   574   e-161
ref|XP_006351139.1| PREDICTED: replication factor C subunit 2-li...   573   e-161
ref|XP_002307456.1| replication factor C 37 kDa family protein [...   565   e-158
ref|XP_002285874.1| PREDICTED: replication factor C subunit 4 is...   565   e-158
emb|CAN83520.1| hypothetical protein VITISV_019805 [Vitis vinifera]   563   e-158
ref|XP_006472822.1| PREDICTED: replication factor C subunit 4-li...   562   e-157
ref|XP_002520330.1| replication factor C / DNA polymerase III ga...   562   e-157
ref|XP_006434256.1| hypothetical protein CICLE_v10001485mg [Citr...   559   e-156
ref|XP_004290901.1| PREDICTED: replication factor C subunit 4-li...   555   e-155
ref|XP_006416276.1| hypothetical protein EUTSA_v10008129mg [Eutr...   550   e-154
ref|XP_004142636.1| PREDICTED: replication factor C subunit 4-li...   549   e-154
ref|XP_003523427.1| PREDICTED: replication factor C subunit 4-li...   545   e-152
ref|XP_002890453.1| EMB1968 [Arabidopsis lyrata subsp. lyrata] g...   545   e-152
ref|XP_003634411.1| PREDICTED: replication factor C subunit 4 [V...   544   e-152
ref|XP_004502518.1| PREDICTED: replication factor C subunit 4-li...   543   e-152
ref|NP_564148.1| replication factor C subunit 4 [Arabidopsis tha...   543   e-152
gb|EMT17871.1| Replication factor C subunit 4 [Aegilops tauschii]     541   e-151
ref|XP_003602047.1| Replication factor C subunit [Medicago trunc...   541   e-151
gb|AFK40832.1| unknown [Lotus japonicus]                              540   e-151

>gb|EOY16376.1| ATPase family associated with various cellular activities (AAA)
            [Theobroma cacao]
          Length = 345

 Score =  574 bits (1480), Expect = e-161
 Identities = 294/345 (85%), Positives = 314/345 (91%), Gaps = 4/345 (1%)
 Frame = -1

Query: 1305 MAPLLQSSQPWVEKYRPKQVKHVAHQDEVVRVLTNTLETANCPHMLFYGPPGTGKTTTAL 1126
            MAP+LQSSQPWVEKYRPKQVK VAHQDEVVRVLTNTLET+NCPHMLFYGPPGTGKTTTAL
Sbjct: 1    MAPVLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSNCPHMLFYGPPGTGKTTTAL 60

Query: 1125 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSA-RQGGYPCPPFKIII 949
            AIAHQLFGPELYKSRVLELNASD+RGINVVRTKIKDFAAVAVGS  RQGGYPCPPFKIII
Sbjct: 61   AIAHQLFGPELYKSRVLELNASDERGINVVRTKIKDFAAVAVGSGQRQGGYPCPPFKIII 120

Query: 948  LDEADSMTEEAQ---NALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLPED 778
            LDEADSMTE+AQ   NALRRTMET+SKVTRFFFICNYISRIIEPLASRCAKFRFK L E+
Sbjct: 121  LDEADSMTEDAQACLNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKALSEE 180

Query: 777  IMSNRILHICQEEGLNLNSEALSTLSSISQGDLRRAITYLQSAARLYGXXXXXXXXXXXS 598
            IMSNR+LHIC EEGL+L+SEALSTLSSISQGDLRRAITYLQ AARL+G           S
Sbjct: 181  IMSNRVLHICNEEGLHLDSEALSTLSSISQGDLRRAITYLQGAARLFGSTISSKDLLSVS 240

Query: 597  GVIPEEVVNTLLAACRSGNFDLADKEVNNVIAEGYPVAQILSQLFDLVAEADDISDEQKA 418
            GVIP+EVV  L AAC+SGNFDLA+KEVNNVIAEG+PV+Q+LSQLFD+V EADDI DEQKA
Sbjct: 241  GVIPQEVVEALYAACKSGNFDLANKEVNNVIAEGFPVSQMLSQLFDVVVEADDIPDEQKA 300

Query: 417  RICKKLAEADKRLVDGADEYLQLLDVTSNTMRALSNTPEEFSYDS 283
            RICK LAEADKRLVDGADEYLQLLDV SNTMRAL N P+EF ++S
Sbjct: 301  RICKSLAEADKRLVDGADEYLQLLDVASNTMRALCNMPQEFCFES 345


>ref|XP_004250308.1| PREDICTED: replication factor C subunit 4-like [Solanum lycopersicum]
          Length = 339

 Score =  574 bits (1479), Expect = e-161
 Identities = 286/339 (84%), Positives = 314/339 (92%)
 Frame = -1

Query: 1305 MAPLLQSSQPWVEKYRPKQVKHVAHQDEVVRVLTNTLETANCPHMLFYGPPGTGKTTTAL 1126
            MAP++QSSQPWVEKYRPKQVK VAHQDEVVRVLTNTLET+NCPHMLFYGPPGTGKTTTAL
Sbjct: 1    MAPVMQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSNCPHMLFYGPPGTGKTTTAL 60

Query: 1125 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSARQGGYPCPPFKIIIL 946
            AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIK+FAAVAVGS RQ GYPCPPFKIIIL
Sbjct: 61   AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKNFAAVAVGSNRQSGYPCPPFKIIIL 120

Query: 945  DEADSMTEEAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLPEDIMSN 766
            DEADSMT++AQNALRRTMET+SKVTRFFFICNYISRIIEPLASRCAKFRFKPLPE+IM +
Sbjct: 121  DEADSMTQDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLPEEIMGS 180

Query: 765  RILHICQEEGLNLNSEALSTLSSISQGDLRRAITYLQSAARLYGXXXXXXXXXXXSGVIP 586
            RILHIC+EEGLNL+SEALSTLSSISQGDLRRAITYLQSAARL+G           SGVIP
Sbjct: 181  RILHICKEEGLNLDSEALSTLSSISQGDLRRAITYLQSAARLFGSSISAKELISVSGVIP 240

Query: 585  EEVVNTLLAACRSGNFDLADKEVNNVIAEGYPVAQILSQLFDLVAEADDISDEQKARICK 406
             EVV  + +ACRSGNFDLA+KEVNNVIAEGYPV+Q+LSQL+D++ +ADDISDEQKARICK
Sbjct: 241  NEVVQAIFSACRSGNFDLANKEVNNVIAEGYPVSQMLSQLYDILVDADDISDEQKARICK 300

Query: 405  KLAEADKRLVDGADEYLQLLDVTSNTMRALSNTPEEFSY 289
            K AEADK LVDGADEYLQLL+V S+TM+ALSN P++ ++
Sbjct: 301  KFAEADKCLVDGADEYLQLLNVASSTMQALSNMPQDMTF 339


>ref|XP_006351139.1| PREDICTED: replication factor C subunit 2-like [Solanum tuberosum]
          Length = 339

 Score =  573 bits (1477), Expect = e-161
 Identities = 285/339 (84%), Positives = 314/339 (92%)
 Frame = -1

Query: 1305 MAPLLQSSQPWVEKYRPKQVKHVAHQDEVVRVLTNTLETANCPHMLFYGPPGTGKTTTAL 1126
            MAP++QSSQPWVEKYRPK+VK VAHQDEVVRVLTNTLET+NCPHMLFYGPPGTGKTTTAL
Sbjct: 1    MAPVMQSSQPWVEKYRPKKVKDVAHQDEVVRVLTNTLETSNCPHMLFYGPPGTGKTTTAL 60

Query: 1125 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSARQGGYPCPPFKIIIL 946
            AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIK+FAAVAVGS RQ GYPCPPFKIIIL
Sbjct: 61   AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKNFAAVAVGSNRQSGYPCPPFKIIIL 120

Query: 945  DEADSMTEEAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLPEDIMSN 766
            DEADSMT++AQNALRRTMET+SKVTRFFFICNYISRIIEPLASRCAKFRFKPLPE++M +
Sbjct: 121  DEADSMTQDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLPEEVMGS 180

Query: 765  RILHICQEEGLNLNSEALSTLSSISQGDLRRAITYLQSAARLYGXXXXXXXXXXXSGVIP 586
            RILHIC+EEGLNL+SEALSTLSSISQGDLRRAITYLQSAARL+G           SGVIP
Sbjct: 181  RILHICKEEGLNLDSEALSTLSSISQGDLRRAITYLQSAARLFGSSISAKELISVSGVIP 240

Query: 585  EEVVNTLLAACRSGNFDLADKEVNNVIAEGYPVAQILSQLFDLVAEADDISDEQKARICK 406
             EVV  + +ACRSGNFDLA+KEVNNVIAEGYPV+Q+LSQL+D+V +ADDISDEQKARICK
Sbjct: 241  NEVVQAMFSACRSGNFDLANKEVNNVIAEGYPVSQMLSQLYDIVVDADDISDEQKARICK 300

Query: 405  KLAEADKRLVDGADEYLQLLDVTSNTMRALSNTPEEFSY 289
            K AEADK LVDGADEYLQLL+V S+TM+ALSN P++ ++
Sbjct: 301  KFAEADKCLVDGADEYLQLLNVVSSTMQALSNMPQDMAF 339


>ref|XP_002307456.1| replication factor C 37 kDa family protein [Populus trichocarpa]
            gi|222856905|gb|EEE94452.1| replication factor C 37 kDa
            family protein [Populus trichocarpa]
          Length = 342

 Score =  565 bits (1457), Expect = e-158
 Identities = 285/341 (83%), Positives = 308/341 (90%), Gaps = 1/341 (0%)
 Frame = -1

Query: 1305 MAPLLQSSQPWVEKYRPKQVKHVAHQDEVVRVLTNTLETANCPHMLFYGPPGTGKTTTAL 1126
            MAPLLQSSQ WVEKYRPKQ+K VAHQDEVVRVLTNTLETANCPHMLFYGPPGTGKTTTAL
Sbjct: 1    MAPLLQSSQQWVEKYRPKQIKDVAHQDEVVRVLTNTLETANCPHMLFYGPPGTGKTTTAL 60

Query: 1125 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSA-RQGGYPCPPFKIII 949
            AIAHQL+GPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGS  RQG YPCPP+KIII
Sbjct: 61   AIAHQLYGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSGQRQGVYPCPPYKIII 120

Query: 948  LDEADSMTEEAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLPEDIMS 769
            LDEADSMTE+AQNALRRTMET+SKVTRFFFICNYISRIIEPLASRCAKFRFKPLPE+IMS
Sbjct: 121  LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLPEEIMS 180

Query: 768  NRILHICQEEGLNLNSEALSTLSSISQGDLRRAITYLQSAARLYGXXXXXXXXXXXSGVI 589
            NRILHIC EEGL L++EALSTLSS+SQGDLRRAITYLQ AARL+G           SG I
Sbjct: 181  NRILHICNEEGLTLDTEALSTLSSVSQGDLRRAITYLQGAARLFGSSISSKDLISVSGAI 240

Query: 588  PEEVVNTLLAACRSGNFDLADKEVNNVIAEGYPVAQILSQLFDLVAEADDISDEQKARIC 409
            P EV   + AAC++G+FDLA+KEVN+VIAEGYPV+Q+L+QLF++V E DDISDEQKARIC
Sbjct: 241  PREVTEAIYAACKNGDFDLANKEVNDVIAEGYPVSQMLAQLFEVVVEVDDISDEQKARIC 300

Query: 408  KKLAEADKRLVDGADEYLQLLDVTSNTMRALSNTPEEFSYD 286
            K LA ADK LVDGADEYLQLLDV SNTMR+L N P+EFSYD
Sbjct: 301  KSLATADKCLVDGADEYLQLLDVVSNTMRSLCNMPQEFSYD 341


>ref|XP_002285874.1| PREDICTED: replication factor C subunit 4 isoform 1 [Vitis vinifera]
            gi|302141781|emb|CBI18984.3| unnamed protein product
            [Vitis vinifera]
          Length = 341

 Score =  565 bits (1456), Expect = e-158
 Identities = 290/342 (84%), Positives = 310/342 (90%), Gaps = 1/342 (0%)
 Frame = -1

Query: 1305 MAPLLQSSQPWVEKYRPKQVKHVAHQDEVVRVLTNTLETANCPHMLFYGPPGTGKTTTAL 1126
            MAP+LQSSQPWVEKYRPKQVK VAHQDEVVRVLTNTLET NCPHMLFYGPPGTGKTTTAL
Sbjct: 1    MAPVLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETTNCPHMLFYGPPGTGKTTTAL 60

Query: 1125 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSA-RQGGYPCPPFKIII 949
            AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGS  RQGGYPCPP+KIII
Sbjct: 61   AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSGHRQGGYPCPPYKIII 120

Query: 948  LDEADSMTEEAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLPEDIMS 769
            LDEADSMTE+AQNALRRTMET+SKVTRFFFICNYISRIIEPLASRCAKFRFKPL E+IMS
Sbjct: 121  LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEIMS 180

Query: 768  NRILHICQEEGLNLNSEALSTLSSISQGDLRRAITYLQSAARLYGXXXXXXXXXXXSGVI 589
            +RILHIC+EE LNL+SEALSTLSSISQGDLRRAITYLQ AARL+G           SGV+
Sbjct: 181  SRILHICKEEELNLDSEALSTLSSISQGDLRRAITYLQGAARLFGSIISSKDLISVSGVV 240

Query: 588  PEEVVNTLLAACRSGNFDLADKEVNNVIAEGYPVAQILSQLFDLVAEADDISDEQKARIC 409
            P+ VV  L AAC+SG+FD A+KEVNNVIAEGYPV+Q+L QLFD+V EA DISDEQKARIC
Sbjct: 241  PQHVVQALFAACKSGDFDSANKEVNNVIAEGYPVSQMLYQLFDVVVEA-DISDEQKARIC 299

Query: 408  KKLAEADKRLVDGADEYLQLLDVTSNTMRALSNTPEEFSYDS 283
            K+LAEADK LVDGADEYLQLLDV SN MRAL N PEEF ++S
Sbjct: 300  KRLAEADKCLVDGADEYLQLLDVASNAMRALCNMPEEFPHES 341


>emb|CAN83520.1| hypothetical protein VITISV_019805 [Vitis vinifera]
          Length = 341

 Score =  563 bits (1451), Expect = e-158
 Identities = 289/342 (84%), Positives = 309/342 (90%), Gaps = 1/342 (0%)
 Frame = -1

Query: 1305 MAPLLQSSQPWVEKYRPKQVKHVAHQDEVVRVLTNTLETANCPHMLFYGPPGTGKTTTAL 1126
            MAP+LQSSQPWVEKYRPKQVK VAHQDEVVRVLTNTLET NCPHMLFYGPPGTGKTTTAL
Sbjct: 1    MAPVLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETTNCPHMLFYGPPGTGKTTTAL 60

Query: 1125 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSA-RQGGYPCPPFKIII 949
            AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFA VAVGS  RQGGYPCPP+KIII
Sbjct: 61   AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAXVAVGSGHRQGGYPCPPYKIII 120

Query: 948  LDEADSMTEEAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLPEDIMS 769
            LDEADSMTE+AQNALRRTMET+SKVTRFFFICNYISRIIEPLASRCAKFRFKPL E+IMS
Sbjct: 121  LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEIMS 180

Query: 768  NRILHICQEEGLNLNSEALSTLSSISQGDLRRAITYLQSAARLYGXXXXXXXXXXXSGVI 589
            +RILHIC+EE LNL+SEALSTLSSISQGDLRRAITYLQ AARL+G           SGV+
Sbjct: 181  SRILHICKEEELNLDSEALSTLSSISQGDLRRAITYLQGAARLFGSIISSKDLISVSGVV 240

Query: 588  PEEVVNTLLAACRSGNFDLADKEVNNVIAEGYPVAQILSQLFDLVAEADDISDEQKARIC 409
            P+ VV  L AAC+SG+FD A+KEVNNVIAEGYPV+Q+L QLFD+V EA DISDEQKARIC
Sbjct: 241  PQHVVQALFAACKSGDFDSANKEVNNVIAEGYPVSQMLYQLFDVVVEA-DISDEQKARIC 299

Query: 408  KKLAEADKRLVDGADEYLQLLDVTSNTMRALSNTPEEFSYDS 283
            K+LAEADK LVDGADEYLQLLDV SN MRAL N PEEF ++S
Sbjct: 300  KRLAEADKCLVDGADEYLQLLDVASNAMRALCNMPEEFPHES 341


>ref|XP_006472822.1| PREDICTED: replication factor C subunit 4-like isoform X1 [Citrus
            sinensis]
          Length = 342

 Score =  562 bits (1448), Expect = e-157
 Identities = 284/341 (83%), Positives = 306/341 (89%), Gaps = 1/341 (0%)
 Frame = -1

Query: 1305 MAPLLQSSQPWVEKYRPKQVKHVAHQDEVVRVLTNTLETANCPHMLFYGPPGTGKTTTAL 1126
            MAP+LQSSQPWVEKYRPKQVK VAHQ+EVVRVLTNTLETANCPHMLFYGPPGTGKTTTAL
Sbjct: 1    MAPVLQSSQPWVEKYRPKQVKDVAHQEEVVRVLTNTLETANCPHMLFYGPPGTGKTTTAL 60

Query: 1125 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSA-RQGGYPCPPFKIII 949
            AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIK FAAVAVGS  R+GGYPCPP+KIII
Sbjct: 61   AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKTFAAVAVGSGQRRGGYPCPPYKIII 120

Query: 948  LDEADSMTEEAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLPEDIMS 769
            LDEADSMTE+AQNALRRTMET+SKVTRFFFICNYISRIIEPLASRCAKFRFKPL E++MS
Sbjct: 121  LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180

Query: 768  NRILHICQEEGLNLNSEALSTLSSISQGDLRRAITYLQSAARLYGXXXXXXXXXXXSGVI 589
            +R+LHIC EEGLNL++EALSTLSSISQGDLRRAITYLQ AARL+G           SGVI
Sbjct: 181  SRVLHICNEEGLNLDAEALSTLSSISQGDLRRAITYLQGAARLFGSSITSKDLISVSGVI 240

Query: 588  PEEVVNTLLAACRSGNFDLADKEVNNVIAEGYPVAQILSQLFDLVAEADDISDEQKARIC 409
            P EVV  L A CRSG+FDLA+KEVNN+IAEGYP + +LSQLFD+V E +DISDEQKARIC
Sbjct: 241  PPEVVEGLFAVCRSGDFDLANKEVNNIIAEGYPASLLLSQLFDVVVETEDISDEQKARIC 300

Query: 408  KKLAEADKRLVDGADEYLQLLDVTSNTMRALSNTPEEFSYD 286
            K LAE DK LVDGADEYLQLLDV SN +RA+ N PEEF YD
Sbjct: 301  KCLAEVDKCLVDGADEYLQLLDVASNVIRAVCNMPEEFQYD 341


>ref|XP_002520330.1| replication factor C / DNA polymerase III gamma-tau subunit, putative
            [Ricinus communis] gi|223540549|gb|EEF42116.1|
            replication factor C / DNA polymerase III gamma-tau
            subunit, putative [Ricinus communis]
          Length = 342

 Score =  562 bits (1448), Expect = e-157
 Identities = 282/342 (82%), Positives = 309/342 (90%), Gaps = 1/342 (0%)
 Frame = -1

Query: 1305 MAPLLQSSQPWVEKYRPKQVKHVAHQDEVVRVLTNTLETANCPHMLFYGPPGTGKTTTAL 1126
            MAP+LQSSQPWVEKYRPKQVK VAHQ+EVVRVLTNTLET+NCPHMLFYGPPGTGKTTTAL
Sbjct: 1    MAPILQSSQPWVEKYRPKQVKDVAHQEEVVRVLTNTLETSNCPHMLFYGPPGTGKTTTAL 60

Query: 1125 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSA-RQGGYPCPPFKIII 949
            AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIK+FAAVAVGS  R GGYPCPP+KIII
Sbjct: 61   AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKNFAAVAVGSGQRAGGYPCPPYKIII 120

Query: 948  LDEADSMTEEAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLPEDIMS 769
            LDEADSMTE+AQNALRRTMET+SKVTRFFF+CNYISRIIEPLASRCAKFRFKPL E+IMS
Sbjct: 121  LDEADSMTEDAQNALRRTMETYSKVTRFFFLCNYISRIIEPLASRCAKFRFKPLSEEIMS 180

Query: 768  NRILHICQEEGLNLNSEALSTLSSISQGDLRRAITYLQSAARLYGXXXXXXXXXXXSGVI 589
            +R+LHIC+EEGLNL++EALSTLS +SQGDLRRAITYLQ AARLYG           SGVI
Sbjct: 181  SRVLHICREEGLNLDAEALSTLSYVSQGDLRRAITYLQGAARLYGSTISSKDLISVSGVI 240

Query: 588  PEEVVNTLLAACRSGNFDLADKEVNNVIAEGYPVAQILSQLFDLVAEADDISDEQKARIC 409
            P+E V  L AACRSG+FD+A+KEVNN+IAEGYPV+Q+L QL ++V EADDISDEQKA+IC
Sbjct: 241  PQEAVGALYAACRSGDFDMANKEVNNIIAEGYPVSQMLVQLLEVVVEADDISDEQKAQIC 300

Query: 408  KKLAEADKRLVDGADEYLQLLDVTSNTMRALSNTPEEFSYDS 283
            K L  ADK LVDGADEYLQLLDV SNTMRAL N P+EF Y+S
Sbjct: 301  KSLGAADKCLVDGADEYLQLLDVASNTMRALCNMPQEFPYES 342


>ref|XP_006434256.1| hypothetical protein CICLE_v10001485mg [Citrus clementina]
            gi|557536378|gb|ESR47496.1| hypothetical protein
            CICLE_v10001485mg [Citrus clementina]
          Length = 382

 Score =  559 bits (1440), Expect = e-156
 Identities = 283/348 (81%), Positives = 308/348 (88%), Gaps = 1/348 (0%)
 Frame = -1

Query: 1326 EKYLYRAMAPLLQSSQPWVEKYRPKQVKHVAHQDEVVRVLTNTLETANCPHMLFYGPPGT 1147
            E  + R MAP+LQSSQPWVEKYRPKQVK VAHQ+EVVRVLTNTLETANCPHMLFYGPPGT
Sbjct: 34   EDEVKRKMAPVLQSSQPWVEKYRPKQVKDVAHQEEVVRVLTNTLETANCPHMLFYGPPGT 93

Query: 1146 GKTTTALAIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSA-RQGGYPC 970
            GKTTTALAIAHQLFGPELYKSRVLELNASDDRGINVVRTKIK FAAVAVGS  R+GGYPC
Sbjct: 94   GKTTTALAIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKTFAAVAVGSGQRRGGYPC 153

Query: 969  PPFKIIILDEADSMTEEAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKP 790
            PP+KIIILDEADSMTE+AQNALRRTMET+SKVTRFFFICNYISRIIEPLASRCAKFRFKP
Sbjct: 154  PPYKIIILDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKP 213

Query: 789  LPEDIMSNRILHICQEEGLNLNSEALSTLSSISQGDLRRAITYLQSAARLYGXXXXXXXX 610
            L E++MS+R+LHIC EEGLNL++EALSTLSSIS GDLRRAITYLQ AARL+G        
Sbjct: 214  LSEEVMSSRVLHICNEEGLNLDAEALSTLSSISHGDLRRAITYLQGAARLFGSSITSKDL 273

Query: 609  XXXSGVIPEEVVNTLLAACRSGNFDLADKEVNNVIAEGYPVAQILSQLFDLVAEADDISD 430
               SGVIP EVV  L A CRSG+FDLA+KEVNN+IAEGYP + +LSQLFD+V E +DISD
Sbjct: 274  ISVSGVIPPEVVEGLFAVCRSGDFDLANKEVNNIIAEGYPASLLLSQLFDVVVETEDISD 333

Query: 429  EQKARICKKLAEADKRLVDGADEYLQLLDVTSNTMRALSNTPEEFSYD 286
            EQ+ARICK LA+ DK LVDGADEYLQLLDV SN +RA+ N PEEF YD
Sbjct: 334  EQQARICKCLAKVDKCLVDGADEYLQLLDVASNVIRAVCNMPEEFQYD 381


>ref|XP_004290901.1| PREDICTED: replication factor C subunit 4-like [Fragaria vesca subsp.
            vesca]
          Length = 339

 Score =  555 bits (1430), Expect = e-155
 Identities = 282/339 (83%), Positives = 305/339 (89%), Gaps = 1/339 (0%)
 Frame = -1

Query: 1305 MAPLLQSSQPWVEKYRPKQVKHVAHQDEVVRVLTNTLETANCPHMLFYGPPGTGKTTTAL 1126
            MAPL+ SSQPWVEKYRPKQVK VA QDEVVRVLTNTLET+NCPHMLFYGPPGTGKTTTAL
Sbjct: 1    MAPLVPSSQPWVEKYRPKQVKDVAQQDEVVRVLTNTLETSNCPHMLFYGPPGTGKTTTAL 60

Query: 1125 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSAR-QGGYPCPPFKIII 949
            AIA QLFGPELYKSRVLELNASDDRGIN+VRTKIKDFAAVAV S + QGGYPCPPFKIII
Sbjct: 61   AIARQLFGPELYKSRVLELNASDDRGINIVRTKIKDFAAVAVKSCKGQGGYPCPPFKIII 120

Query: 948  LDEADSMTEEAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLPEDIMS 769
            LDEADSMTE+AQNALRRTMET+S+ +RFFF+CNYISRIIEPLASRCAKFRFKPL EDIM 
Sbjct: 121  LDEADSMTEDAQNALRRTMETYSRGSRFFFLCNYISRIIEPLASRCAKFRFKPLSEDIMI 180

Query: 768  NRILHICQEEGLNLNSEALSTLSSISQGDLRRAITYLQSAARLYGXXXXXXXXXXXSGVI 589
             R+LHICQEEGL+L  EALSTLSSISQGDLRRAITYLQSAARL+G           SGVI
Sbjct: 181  TRVLHICQEEGLDLEPEALSTLSSISQGDLRRAITYLQSAARLFGSSITSKDLISVSGVI 240

Query: 588  PEEVVNTLLAACRSGNFDLADKEVNNVIAEGYPVAQILSQLFDLVAEADDISDEQKARIC 409
            P+EVV++  AACRSGNFDLA+KEVNNVIAEGYPV+Q+ SQLFD+V EADDISDEQ ARIC
Sbjct: 241  PQEVVDSFFAACRSGNFDLANKEVNNVIAEGYPVSQMFSQLFDIVVEADDISDEQIARIC 300

Query: 408  KKLAEADKRLVDGADEYLQLLDVTSNTMRALSNTPEEFS 292
            KKL EADKRLVDG+DEYLQLLDV S+TMRA+ N  E+FS
Sbjct: 301  KKLGEADKRLVDGSDEYLQLLDVASSTMRAICNMQEDFS 339


>ref|XP_006416276.1| hypothetical protein EUTSA_v10008129mg [Eutrema salsugineum]
            gi|557094047|gb|ESQ34629.1| hypothetical protein
            EUTSA_v10008129mg [Eutrema salsugineum]
          Length = 339

 Score =  550 bits (1417), Expect = e-154
 Identities = 279/339 (82%), Positives = 306/339 (90%), Gaps = 2/339 (0%)
 Frame = -1

Query: 1305 MAPLLQSSQPWVEKYRPKQVKHVAHQDEVVRVLTNTLETANCPHMLFYGPPGTGKTTTAL 1126
            MAP+LQSSQPWVEKYRPKQVK VAHQ+EVVRVLTNTLETANCPHMLFYGPPGTGKTTTAL
Sbjct: 1    MAPVLQSSQPWVEKYRPKQVKDVAHQEEVVRVLTNTLETANCPHMLFYGPPGTGKTTTAL 60

Query: 1125 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSA-RQGGYPCPPFKIII 949
            AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGS  RQGGYPCP FKIII
Sbjct: 61   AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSNNRQGGYPCPSFKIII 120

Query: 948  LDEADSMTEEAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLPEDIMS 769
            LDEADSMTE+AQNALRRTMET+SKVTRFFFICNYISRIIEPLASRCAKFRFKPL E++M+
Sbjct: 121  LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMT 180

Query: 768  NRILHICQEEGLNLNSEALSTLSSISQGDLRRAITYLQSAARLYGXXXXXXXXXXXSGVI 589
            NRILHIC EEGLNL  EALSTLSSISQGDLRRAITYLQSAARL+G           SGV+
Sbjct: 181  NRILHICNEEGLNLGGEALSTLSSISQGDLRRAITYLQSAARLFGSTITSTDLLDVSGVV 240

Query: 588  PEEVVNTLLAACRSGNFDLADKEVNNVIAEGYPVAQILSQLFDLVAEA-DDISDEQKARI 412
            P EVV  L  AC+SG+FD+A+KEV++++AEGYP +QI++QLFD+V EA DDI+D+QKA+I
Sbjct: 241  PLEVVKRLFTACKSGDFDIANKEVDDIVAEGYPASQIINQLFDIVVEAGDDITDKQKAQI 300

Query: 411  CKKLAEADKRLVDGADEYLQLLDVTSNTMRALSNTPEEF 295
            CK LAE DKRLVDGADEYLQLLDV SNT+RALS   ++F
Sbjct: 301  CKCLAETDKRLVDGADEYLQLLDVASNTIRALSEMAQDF 339


>ref|XP_004142636.1| PREDICTED: replication factor C subunit 4-like [Cucumis sativus]
          Length = 336

 Score =  549 bits (1415), Expect = e-154
 Identities = 279/331 (84%), Positives = 299/331 (90%), Gaps = 1/331 (0%)
 Frame = -1

Query: 1305 MAPLLQSSQPWVEKYRPKQVKHVAHQDEVVRVLTNTLETANCPHMLFYGPPGTGKTTTAL 1126
            MAPLLQSSQPWVEKYRPKQVK VAHQDEVVRVLTNTLETANCPHMLFYGPPGTGKTTTAL
Sbjct: 1    MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETANCPHMLFYGPPGTGKTTTAL 60

Query: 1125 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSA-RQGGYPCPPFKIII 949
            AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFA VAV S  RQGGYPCPPFKIII
Sbjct: 61   AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII 120

Query: 948  LDEADSMTEEAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLPEDIMS 769
            LDEADSMTE+AQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPL E++MS
Sbjct: 121  LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180

Query: 768  NRILHICQEEGLNLNSEALSTLSSISQGDLRRAITYLQSAARLYGXXXXXXXXXXXSGVI 589
             RILHI  EEGL+L+ EALSTLSSISQGDLRRAITYLQSAARL+G           SG+I
Sbjct: 181  KRILHIGNEEGLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLVNVSGII 240

Query: 588  PEEVVNTLLAACRSGNFDLADKEVNNVIAEGYPVAQILSQLFDLVAEADDISDEQKARIC 409
            P+EVV+ L  AC+SGNFD A+K+VNNV+AEGYPVAQ+LSQ+F++V E +D+ DEQKARIC
Sbjct: 241  PQEVVDALFVACKSGNFDTANKKVNNVLAEGYPVAQMLSQIFEVVIEDNDLQDEQKARIC 300

Query: 408  KKLAEADKRLVDGADEYLQLLDVTSNTMRAL 316
            KKLAEADK LVDGADEYLQLLDV S TM+ L
Sbjct: 301  KKLAEADKCLVDGADEYLQLLDVVSQTMQVL 331


>ref|XP_003523427.1| PREDICTED: replication factor C subunit 4-like isoformX1 [Glycine
            max] gi|571452162|ref|XP_006578961.1| PREDICTED:
            replication factor C subunit 4-like isoform X2 [Glycine
            max] gi|571452164|ref|XP_006578962.1| PREDICTED:
            replication factor C subunit 4-like isoform X3 [Glycine
            max]
          Length = 342

 Score =  545 bits (1404), Expect = e-152
 Identities = 276/340 (81%), Positives = 304/340 (89%), Gaps = 1/340 (0%)
 Frame = -1

Query: 1305 MAPLLQSSQPWVEKYRPKQVKHVAHQDEVVRVLTNTLETANCPHMLFYGPPGTGKTTTAL 1126
            MAP+LQS+QPWVEKYRPKQVK VAHQDEVVRVLTNTLET +CPHMLFYGPPGTGKTTTAL
Sbjct: 1    MAPILQSTQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETGSCPHMLFYGPPGTGKTTTAL 60

Query: 1125 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGS-ARQGGYPCPPFKIII 949
            AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVG+  R+ GYPCPPFKII+
Sbjct: 61   AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTNQRKSGYPCPPFKIIV 120

Query: 948  LDEADSMTEEAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLPEDIMS 769
            LDEADSMTE+AQNALRRTMET+SKVTRFFFICNY+SRIIEPLASRCAKFRFKPL E+IMS
Sbjct: 121  LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYVSRIIEPLASRCAKFRFKPLSEEIMS 180

Query: 768  NRILHICQEEGLNLNSEALSTLSSISQGDLRRAITYLQSAARLYGXXXXXXXXXXXSGVI 589
            +RIL+I QEEGL L++EALSTLSSIS GDLRRAITYLQSAARL+G           SGV+
Sbjct: 181  SRILYISQEEGLCLDAEALSTLSSISHGDLRRAITYLQSAARLFGSSISSENLISVSGVV 240

Query: 588  PEEVVNTLLAACRSGNFDLADKEVNNVIAEGYPVAQILSQLFDLVAEADDISDEQKARIC 409
            P +VV  LL AC+SGNFDLA+KEVNN IAEGYP +Q+L+QLF+ + E +D+SDEQKARI 
Sbjct: 241  PAKVVEELLKACKSGNFDLANKEVNNFIAEGYPASQMLTQLFESIVEDNDLSDEQKARIS 300

Query: 408  KKLAEADKRLVDGADEYLQLLDVTSNTMRALSNTPEEFSY 289
            KKL EADK LVDGADEYLQLLDV SNTM+A SN PE F+Y
Sbjct: 301  KKLGEADKCLVDGADEYLQLLDVVSNTMKAFSNMPETFAY 340


>ref|XP_002890453.1| EMB1968 [Arabidopsis lyrata subsp. lyrata]
            gi|297336295|gb|EFH66712.1| EMB1968 [Arabidopsis lyrata
            subsp. lyrata]
          Length = 339

 Score =  545 bits (1403), Expect = e-152
 Identities = 277/339 (81%), Positives = 304/339 (89%), Gaps = 2/339 (0%)
 Frame = -1

Query: 1305 MAPLLQSSQPWVEKYRPKQVKHVAHQDEVVRVLTNTLETANCPHMLFYGPPGTGKTTTAL 1126
            MAP+LQSSQPWVEKYRPKQVK VAHQ+EVVRVLTNTL+TA+CPHMLFYGPPGTGKTTTAL
Sbjct: 1    MAPVLQSSQPWVEKYRPKQVKDVAHQEEVVRVLTNTLQTADCPHMLFYGPPGTGKTTTAL 60

Query: 1125 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSA-RQGGYPCPPFKIII 949
            AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGS  RQ GYPCP FKIII
Sbjct: 61   AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSNHRQSGYPCPSFKIII 120

Query: 948  LDEADSMTEEAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLPEDIMS 769
            LDEADSMTE+AQNALRRTMET+SKVTRFFFICNYISRIIEPLASRCAKFRFKPL E++MS
Sbjct: 121  LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180

Query: 768  NRILHICQEEGLNLNSEALSTLSSISQGDLRRAITYLQSAARLYGXXXXXXXXXXXSGVI 589
            NRILHIC EEGL+L  EALSTLSSISQGDLRRAITYLQSA RL+G           SGV+
Sbjct: 181  NRILHICNEEGLSLGGEALSTLSSISQGDLRRAITYLQSATRLFGSTITSTDLLDVSGVV 240

Query: 588  PEEVVNTLLAACRSGNFDLADKEVNNVIAEGYPVAQILSQLFDLVAEAD-DISDEQKARI 412
            P EVVN L  AC+SG+FD+A+KEV+N++AEGYP +QI++QLFD+VAEAD DI+D QKA+I
Sbjct: 241  PLEVVNKLFTACKSGDFDIANKEVDNIVAEGYPASQIINQLFDIVAEADSDITDMQKAKI 300

Query: 411  CKKLAEADKRLVDGADEYLQLLDVTSNTMRALSNTPEEF 295
            CK LAE DKRLVDGADEYLQLLDV SNT+ ALS   ++F
Sbjct: 301  CKCLAETDKRLVDGADEYLQLLDVASNTILALSEMAQDF 339


>ref|XP_003634411.1| PREDICTED: replication factor C subunit 4 [Vitis vinifera]
          Length = 334

 Score =  544 bits (1401), Expect = e-152
 Identities = 283/342 (82%), Positives = 303/342 (88%), Gaps = 1/342 (0%)
 Frame = -1

Query: 1305 MAPLLQSSQPWVEKYRPKQVKHVAHQDEVVRVLTNTLETANCPHMLFYGPPGTGKTTTAL 1126
            MAP+LQSSQPWVEKYRPKQVK VAHQDEVVRVLTNTLET NCPHMLFYGPPGTGKTTTAL
Sbjct: 1    MAPVLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETTNCPHMLFYGPPGTGKTTTAL 60

Query: 1125 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSA-RQGGYPCPPFKIII 949
            AIAHQLFG       VLELNASDDRGINVVRTKIKDFAAVAVGS  RQGGYPCPP+KIII
Sbjct: 61   AIAHQLFG-------VLELNASDDRGINVVRTKIKDFAAVAVGSGHRQGGYPCPPYKIII 113

Query: 948  LDEADSMTEEAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLPEDIMS 769
            LDEADSMTE+AQNALRRTMET+SKVTRFFFICNYISRIIEPLASRCAKFRFKPL E+IMS
Sbjct: 114  LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEIMS 173

Query: 768  NRILHICQEEGLNLNSEALSTLSSISQGDLRRAITYLQSAARLYGXXXXXXXXXXXSGVI 589
            +RILHIC+EE LNL+SEALSTLSSISQGDLRRAITYLQ AARL+G           SGV+
Sbjct: 174  SRILHICKEEELNLDSEALSTLSSISQGDLRRAITYLQGAARLFGSIISSKDLISVSGVV 233

Query: 588  PEEVVNTLLAACRSGNFDLADKEVNNVIAEGYPVAQILSQLFDLVAEADDISDEQKARIC 409
            P+ VV  L AAC+SG+FD A+KEVNNVIAEGYPV+Q+L QLFD+V EA DISDEQKARIC
Sbjct: 234  PQHVVQALFAACKSGDFDSANKEVNNVIAEGYPVSQMLYQLFDVVVEA-DISDEQKARIC 292

Query: 408  KKLAEADKRLVDGADEYLQLLDVTSNTMRALSNTPEEFSYDS 283
            K+LAEADK LVDGADEYLQLLDV SN MRAL N PEEF ++S
Sbjct: 293  KRLAEADKCLVDGADEYLQLLDVASNAMRALCNMPEEFPHES 334


>ref|XP_004502518.1| PREDICTED: replication factor C subunit 4-like [Cicer arietinum]
          Length = 341

 Score =  543 bits (1398), Expect = e-152
 Identities = 274/341 (80%), Positives = 304/341 (89%), Gaps = 1/341 (0%)
 Frame = -1

Query: 1305 MAPLLQSSQPWVEKYRPKQVKHVAHQDEVVRVLTNTLETANCPHMLFYGPPGTGKTTTAL 1126
            MAP++ SSQPWVEKYRPKQVK VAHQ+EV+RVLTNTLET +CPHMLFYGPPGTGKTTTAL
Sbjct: 1    MAPIIPSSQPWVEKYRPKQVKDVAHQEEVIRVLTNTLETGSCPHMLFYGPPGTGKTTTAL 60

Query: 1125 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGS-ARQGGYPCPPFKIII 949
            AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVG+  R+ GYPCPP+KII+
Sbjct: 61   AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTNQRKNGYPCPPYKIIV 120

Query: 948  LDEADSMTEEAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLPEDIMS 769
            LDEADSMTE+AQNALRRTMET+SKVTRFFFICNYISRIIEPLASRCAKFRFKPL E+IMS
Sbjct: 121  LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLTEEIMS 180

Query: 768  NRILHICQEEGLNLNSEALSTLSSISQGDLRRAITYLQSAARLYGXXXXXXXXXXXSGVI 589
            +RIL+IC+EEGL L++E LS LSSISQGDLRRAITYLQSAARL+G           SGV+
Sbjct: 181  SRILYICKEEGLYLDAEGLSALSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGVV 240

Query: 588  PEEVVNTLLAACRSGNFDLADKEVNNVIAEGYPVAQILSQLFDLVAEADDISDEQKARIC 409
            P EVV  LL AC+SGNFDLA+KEVNN IAEGYPV+QIL+QLF+ + E +DISDEQKARI 
Sbjct: 241  PAEVVEALLKACKSGNFDLANKEVNNFIAEGYPVSQILTQLFEAIVEENDISDEQKARIS 300

Query: 408  KKLAEADKRLVDGADEYLQLLDVTSNTMRALSNTPEEFSYD 286
            KKL EADK LVDGADEYLQLL V SNT++AL N PE F+Y+
Sbjct: 301  KKLGEADKCLVDGADEYLQLLAVVSNTIQALCNLPEGFAYE 341


>ref|NP_564148.1| replication factor C subunit 4 [Arabidopsis thaliana]
            gi|75163839|sp|Q93ZX1.1|RFC4_ARATH RecName:
            Full=Replication factor C subunit 4; Short=AtRFC4;
            AltName: Full=Activator 1 subunit 4; AltName:
            Full=Protein EMBRYO DEFECTIVE 1968
            gi|15810343|gb|AAL07059.1| putative replication factor
            [Arabidopsis thaliana] gi|17065122|gb|AAL32715.1| Similar
            replication factor C, 37-kDa subunit [Arabidopsis
            thaliana] gi|21536935|gb|AAM61276.1| putative replication
            factor [Arabidopsis thaliana] gi|34098857|gb|AAQ56811.1|
            At1g21690 [Arabidopsis thaliana]
            gi|332192018|gb|AEE30139.1| protein embryo defective 1968
            [Arabidopsis thaliana]
          Length = 339

 Score =  543 bits (1398), Expect = e-152
 Identities = 276/339 (81%), Positives = 305/339 (89%), Gaps = 2/339 (0%)
 Frame = -1

Query: 1305 MAPLLQSSQPWVEKYRPKQVKHVAHQDEVVRVLTNTLETANCPHMLFYGPPGTGKTTTAL 1126
            MAP+LQSSQPWVEKYRPKQVK VAHQ+EVVRVLTNTL+TA+CPHMLFYGPPGTGKTTTAL
Sbjct: 1    MAPVLQSSQPWVEKYRPKQVKDVAHQEEVVRVLTNTLQTADCPHMLFYGPPGTGKTTTAL 60

Query: 1125 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSA-RQGGYPCPPFKIII 949
            AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGS  RQ GYPCP FKIII
Sbjct: 61   AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSNHRQSGYPCPSFKIII 120

Query: 948  LDEADSMTEEAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLPEDIMS 769
            LDEADSMTE+AQNALRRTMET+SKVTRFFFICNYISRIIEPLASRCAKFRFKPL E++MS
Sbjct: 121  LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180

Query: 768  NRILHICQEEGLNLNSEALSTLSSISQGDLRRAITYLQSAARLYGXXXXXXXXXXXSGVI 589
            NRILHIC EEGL+L+ EALSTLSSISQGDLRRAITYLQSA RL+G           SGV+
Sbjct: 181  NRILHICNEEGLSLDGEALSTLSSISQGDLRRAITYLQSATRLFGSTITSTDLLNVSGVV 240

Query: 588  PEEVVNTLLAACRSGNFDLADKEVNNVIAEGYPVAQILSQLFDLVAEAD-DISDEQKARI 412
            P EVVN L  AC+SG+FD+A+KEV+N++AEGYP +QI++QLFD+VAEAD DI+D QKA+I
Sbjct: 241  PLEVVNKLFTACKSGDFDIANKEVDNIVAEGYPASQIINQLFDIVAEADSDITDMQKAKI 300

Query: 411  CKKLAEADKRLVDGADEYLQLLDVTSNTMRALSNTPEEF 295
            CK LAE DKRLVDGADEYLQLLDV S+T+ ALS   ++F
Sbjct: 301  CKCLAETDKRLVDGADEYLQLLDVASSTICALSEMAQDF 339


>gb|EMT17871.1| Replication factor C subunit 4 [Aegilops tauschii]
          Length = 339

 Score =  541 bits (1395), Expect = e-151
 Identities = 268/335 (80%), Positives = 302/335 (90%)
 Frame = -1

Query: 1305 MAPLLQSSQPWVEKYRPKQVKHVAHQDEVVRVLTNTLETANCPHMLFYGPPGTGKTTTAL 1126
            MAPL+ SSQPWVEKYRP+QVK VAHQ+EVVRVLTNTLETA+ PHMLFYGPPGTGKTTTAL
Sbjct: 1    MAPLVPSSQPWVEKYRPRQVKDVAHQEEVVRVLTNTLETADLPHMLFYGPPGTGKTTTAL 60

Query: 1125 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSARQGGYPCPPFKIIIL 946
            AIA+QL+GPELYKSRVLELNASD+RGINVVRTKIKDFAAVAVGSAR+GGYPCPP+KIIIL
Sbjct: 61   AIAYQLYGPELYKSRVLELNASDERGINVVRTKIKDFAAVAVGSARKGGYPCPPYKIIIL 120

Query: 945  DEADSMTEEAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLPEDIMSN 766
            DEADSMTE+AQNALRRTMET+SKVTRFFFICNYISRIIEPLASRCAKFRFKPL ED+MSN
Sbjct: 121  DEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEDVMSN 180

Query: 765  RILHICQEEGLNLNSEALSTLSSISQGDLRRAITYLQSAARLYGXXXXXXXXXXXSGVIP 586
            RILHIC EEGL L+++ALSTLS+ISQGDLRRAITYLQSAARL+G           SG IP
Sbjct: 181  RILHICNEEGLTLDAQALSTLSAISQGDLRRAITYLQSAARLFGSSISASDLISVSGAIP 240

Query: 585  EEVVNTLLAACRSGNFDLADKEVNNVIAEGYPVAQILSQLFDLVAEADDISDEQKARICK 406
            E++V +LL AC+SG FD+A+KEV+N+IA+GYPV+Q+LSQ  D++  ADDI DE KARIC+
Sbjct: 241  EDIVKSLLVACKSGEFDVANKEVSNIIADGYPVSQLLSQFLDVIVNADDIPDEHKARICR 300

Query: 405  KLAEADKRLVDGADEYLQLLDVTSNTMRALSNTPE 301
            KL EADK LVDGADEYLQLLD+ S T+RAL N P+
Sbjct: 301  KLGEADKCLVDGADEYLQLLDMASETIRALFNIPQ 335


>ref|XP_003602047.1| Replication factor C subunit [Medicago truncatula]
            gi|357520353|ref|XP_003630465.1| Replication factor C
            subunit [Medicago truncatula] gi|217073528|gb|ACJ85124.1|
            unknown [Medicago truncatula] gi|355491095|gb|AES72298.1|
            Replication factor C subunit [Medicago truncatula]
            gi|355524487|gb|AET04941.1| Replication factor C subunit
            [Medicago truncatula] gi|388492316|gb|AFK34224.1| unknown
            [Medicago truncatula]
          Length = 339

 Score =  541 bits (1393), Expect = e-151
 Identities = 271/339 (79%), Positives = 305/339 (89%), Gaps = 1/339 (0%)
 Frame = -1

Query: 1305 MAPLLQSSQPWVEKYRPKQVKHVAHQDEVVRVLTNTLETANCPHMLFYGPPGTGKTTTAL 1126
            MAP++QS+QPWVEKYRPKQVK VAHQ+EVVRVLTNTLET +CPHMLFYGPPGTGKTTTAL
Sbjct: 1    MAPIIQSTQPWVEKYRPKQVKDVAHQEEVVRVLTNTLETGSCPHMLFYGPPGTGKTTTAL 60

Query: 1125 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSAR-QGGYPCPPFKIII 949
            AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVG+ + + GYPCPP+KII+
Sbjct: 61   AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTNKPKNGYPCPPYKIIV 120

Query: 948  LDEADSMTEEAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLPEDIMS 769
            LDEADSMTE+AQNALRRTMET+SKVTRFFFICNYISRIIEPLASRCAKFRFKPL E+IMS
Sbjct: 121  LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLTEEIMS 180

Query: 768  NRILHICQEEGLNLNSEALSTLSSISQGDLRRAITYLQSAARLYGXXXXXXXXXXXSGVI 589
            +RI++IC+EEG+ L++E LSTLS+ISQGDLRRAITYLQSAARL+G           SG++
Sbjct: 181  SRIVYICKEEGIYLDAEGLSTLSNISQGDLRRAITYLQSAARLFGSSISSKDLISVSGIV 240

Query: 588  PEEVVNTLLAACRSGNFDLADKEVNNVIAEGYPVAQILSQLFDLVAEADDISDEQKARIC 409
            P EVV  LL ACRSGNFDLA+KEVNN IAEGYPV+Q+L+QLF+ + E +DISDEQKARI 
Sbjct: 241  PAEVVEALLKACRSGNFDLANKEVNNFIAEGYPVSQMLTQLFEAIVEENDISDEQKARIS 300

Query: 408  KKLAEADKRLVDGADEYLQLLDVTSNTMRALSNTPEEFS 292
            KKL EADK LVDGADEYLQLLDV SNT++AL N PE F+
Sbjct: 301  KKLGEADKCLVDGADEYLQLLDVVSNTIQALCNMPEGFA 339


>gb|AFK40832.1| unknown [Lotus japonicus]
          Length = 342

 Score =  540 bits (1392), Expect = e-151
 Identities = 271/341 (79%), Positives = 302/341 (88%), Gaps = 1/341 (0%)
 Frame = -1

Query: 1305 MAPLLQSSQPWVEKYRPKQVKHVAHQDEVVRVLTNTLETANCPHMLFYGPPGTGKTTTAL 1126
            MAP++QSSQPWVEKYRPKQVK VA+QDEVVRVLTNTLET +CPHMLFYGPPGTGKTTTAL
Sbjct: 1    MAPIVQSSQPWVEKYRPKQVKDVAYQDEVVRVLTNTLETGSCPHMLFYGPPGTGKTTTAL 60

Query: 1125 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGS-ARQGGYPCPPFKIII 949
            AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVG+  ++GGYPCPP+KII+
Sbjct: 61   AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTNPKKGGYPCPPYKIIV 120

Query: 948  LDEADSMTEEAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLPEDIMS 769
            LDEADSMTE+AQNALRRTMET+SKVTRFFFICNYISRIIEPLASRCAKFRFKPL E+IMS
Sbjct: 121  LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEIMS 180

Query: 768  NRILHICQEEGLNLNSEALSTLSSISQGDLRRAITYLQSAARLYGXXXXXXXXXXXSGVI 589
            +RIL+IC EEGL+L++E LSTLSSISQGDLRRAITYLQS+ARL+G           SGV+
Sbjct: 181  SRILYICNEEGLHLDAEGLSTLSSISQGDLRRAITYLQSSARLFGSHISSKDLISVSGVV 240

Query: 588  PEEVVNTLLAACRSGNFDLADKEVNNVIAEGYPVAQILSQLFDLVAEADDISDEQKARIC 409
            PE VV  +L AC+SGNFDLA+KEVNN IAEGYP +Q+L+QLFD + E    SD+QKARIC
Sbjct: 241  PENVVEAILKACKSGNFDLANKEVNNFIAEGYPASQLLTQLFDAIVEEKGTSDKQKARIC 300

Query: 408  KKLAEADKRLVDGADEYLQLLDVTSNTMRALSNTPEEFSYD 286
            KKL EADK LVDGADEYLQLLDV SNT +A  + PE  SY+
Sbjct: 301  KKLGEADKCLVDGADEYLQLLDVISNTTKAFCDMPEGLSYE 341