BLASTX nr result
ID: Catharanthus23_contig00016646
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00016646
(869 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMJ28511.1| hypothetical protein PRUPE_ppa016553mg [Prunus pe... 54 3e-12
gb|EEE69154.1| hypothetical protein OsJ_28290 [Oryza sativa Japo... 57 5e-11
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga... 64 3e-10
gb|EMJ27906.1| hypothetical protein PRUPE_ppa020120mg [Prunus pe... 50 5e-10
gb|EMJ04651.1| hypothetical protein PRUPE_ppa022115mg [Prunus pe... 52 8e-10
gb|EMJ18520.1| hypothetical protein PRUPE_ppa019733mg [Prunus pe... 52 8e-10
gb|EMJ26294.1| hypothetical protein PRUPE_ppa016563mg, partial [... 52 2e-09
gb|ADK92871.1| retrotransposon protein [Hypericum perforatum] 54 2e-09
gb|EEE50691.1| hypothetical protein OsJ_30951 [Oryza sativa Japo... 47 2e-09
gb|EEC66671.1| hypothetical protein OsI_32959 [Oryza sativa Indi... 47 2e-09
gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japo... 45 4e-09
emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulga... 54 4e-09
gb|ABA98491.1| retrotransposon protein, putative, unclassified [... 45 5e-09
ref|XP_004305156.1| PREDICTED: putative ribonuclease H protein A... 47 5e-09
gb|ABN08038.1| RNA-directed DNA polymerase (Reverse transcriptas... 45 5e-09
ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621... 43 8e-09
gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza ... 44 1e-08
gb|AAP53315.2| retrotransposon protein, putative, unclassified [... 44 1e-08
ref|XP_004296207.1| PREDICTED: uncharacterized protein LOC101297... 46 1e-08
ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib... 50 1e-08
>gb|EMJ28511.1| hypothetical protein PRUPE_ppa016553mg [Prunus persica]
Length = 992
Score = 54.3 bits (129), Expect(2) = 3e-12
Identities = 27/68 (39%), Positives = 38/68 (55%)
Frame = +1
Query: 40 SFHRIHGKSEKKLSSWKQRRLSQAGRVILINSVVQSISRLLMQCFLLPKSIFHKIGAATR 219
SF+ + + KKL +WK + LS AG+ ILI V Q+I M CFLLPK + +
Sbjct: 409 SFNHLKERLWKKLQTWKGKLLSGAGKEILIKVVAQAIPIYTMSCFLLPKYVCEDLNKLVA 468
Query: 220 DFFWTVAT 243
F+W +T
Sbjct: 469 QFWWNSST 476
Score = 44.3 bits (103), Expect(2) = 3e-12
Identities = 36/120 (30%), Positives = 53/120 (44%), Gaps = 5/120 (4%)
Frame = +3
Query: 246 LYLKSWDRICR*K-----GKRVGWAFGLALK**AFISKLGWQLYKEPSRP*VKLIRYKYL 410
++ +WDR+C K G R AF LAL ++K GW+L + P K+++ KY
Sbjct: 481 IHWMAWDRLCAPKEEGGLGFRNLHAFNLAL-----LAKQGWRLLQNPDSLVTKVLKAKYF 535
Query: 411 RGRRFLDNQAHNLPLRSGVGFWLAEISYRLD*GWTMQKTGA*FYSIWDDPWLPGLPNFPL 590
R FL+ P S V L + + G Q IW+D WLP +F +
Sbjct: 536 PTRSFLETTVS--PYASVVWKSLCDARTVIIQGSRWQVGSGDTIGIWEDRWLPQPNSFQI 593
>gb|EEE69154.1| hypothetical protein OsJ_28290 [Oryza sativa Japonica Group]
Length = 615
Score = 56.6 bits (135), Expect(3) = 5e-11
Identities = 27/65 (41%), Positives = 42/65 (64%)
Frame = +1
Query: 37 ESFHRIHGKSEKKLSSWKQRRLSQAGRVILINSVVQSISRLLMQCFLLPKSIFHKIGAAT 216
++F + + K+L WK+R LS+AG+ ILI SVVQSI M CF L K++ +++G+
Sbjct: 219 QTFSYLKDRVWKRLQGWKERLLSKAGKEILIKSVVQSIPTYAMSCFDLTKTLCNELGSLV 278
Query: 217 RDFFW 231
F+W
Sbjct: 279 CRFWW 283
Score = 32.0 bits (71), Expect(3) = 5e-11
Identities = 32/120 (26%), Positives = 51/120 (42%), Gaps = 9/120 (7%)
Frame = +3
Query: 258 SWDRICR*K-----GKRVGWAFGLALK**AFISKLGWQLYKEPSRP*VKLIRYKYLRGRR 422
SW+ +CR K G R F LA+ +++ GW+L EP +++R KY
Sbjct: 296 SWELLCRRKEQGGIGYRDLHLFNLAM-----LARQGWRLIMEPMSLCAQVLRAKY----- 345
Query: 423 FLDNQAHNLPLRSGVGF-WLAEIS--YRLD*GWTMQKTGA*FYSIWDDPWLP-GLPNFPL 590
F + + G+ + W + + L G + IW DPWLP G+ P+
Sbjct: 346 FPTGDLMAVREKPGISYSWRSIVRGIQALKKGLIWRVGDGTNIDIWHDPWLPSGITRRPI 405
Score = 25.4 bits (54), Expect(3) = 5e-11
Identities = 18/56 (32%), Positives = 23/56 (41%)
Frame = +2
Query: 644 PNTNKWDTGIINHTFPPGVAAAILKMKIPYHEEEPMPWFGHPLRQGISRFKFAYRV 811
P KWD +I F IL + I E+ + W H +GI K AY V
Sbjct: 422 PTIGKWDKELIEGLFWEEDVKQILTIPIRAGVEDGLAW--HFDNRGIFSVKSAYHV 475
>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1369
Score = 63.9 bits (154), Expect(2) = 3e-10
Identities = 31/63 (49%), Positives = 39/63 (61%)
Frame = +1
Query: 43 FHRIHGKSEKKLSSWKQRRLSQAGRVILINSVVQSISRLLMQCFLLPKSIFHKIGAATRD 222
F I + KKL WK + LSQAGR +LI +V Q+I MQCF++PKSI I R+
Sbjct: 774 FQAIQDRVWKKLKGWKGKYLSQAGREVLIKAVAQAIPTYAMQCFVIPKSIIDGIEKMCRN 833
Query: 223 FFW 231
FFW
Sbjct: 834 FFW 836
Score = 27.7 bits (60), Expect(2) = 3e-10
Identities = 20/87 (22%), Positives = 35/87 (40%)
Frame = +3
Query: 330 AFISKLGWQLYKEPSRP*VKLIRYKYLRGRRFLDNQAHNLPLRSGVGFWLAEISYRLD*G 509
A ++K W++ +P ++I+ KY FL +A P S + + G
Sbjct: 873 ALLAKQAWRILTKPDSLMARVIKGKYFPRSNFL--EARVSPNMSFTCKSILSARAVIQKG 930
Query: 510 WTMQKTGA*FYSIWDDPWLPGLPNFPL 590
+IW DPW+P L + +
Sbjct: 931 MCRVIGDGRDTTIWGDPWVPSLERYSI 957
>gb|EMJ27906.1| hypothetical protein PRUPE_ppa020120mg [Prunus persica]
Length = 1011
Score = 50.1 bits (118), Expect(2) = 5e-10
Identities = 26/68 (38%), Positives = 37/68 (54%)
Frame = +1
Query: 40 SFHRIHGKSEKKLSSWKQRRLSQAGRVILINSVVQSISRLLMQCFLLPKSIFHKIGAATR 219
SF+ + + KKL +WK + LS AG+ ILI V Q+I M FLLPK + +
Sbjct: 657 SFNHLKERLWKKLQTWKGKLLSGAGKEILIKVVAQAIPIYTMSYFLLPKYVCEDLNKLVA 716
Query: 220 DFFWTVAT 243
F+W +T
Sbjct: 717 QFWWNSST 724
Score = 41.2 bits (95), Expect(2) = 5e-10
Identities = 36/115 (31%), Positives = 52/115 (45%), Gaps = 7/115 (6%)
Frame = +3
Query: 246 LYLKSWDRICR*K-----GKRVGWAFGLALK**AFISKLGWQLYKEPSRP*VKLIRYKYL 410
++ +WDR+C K G R AF LAL ++K GW+L + P K+++ KY
Sbjct: 729 IHWMAWDRLCAPKEEGGLGFRNLHAFNLAL-----LAKQGWRLLQNPDSLITKVLKAKYF 783
Query: 411 RGRRFLDNQAHNLPLRSGVGFW--LAEISYRLD*GWTMQKTGA*FYSIWDDPWLP 569
R FL+ + L + V W L E + G Q IW+D WLP
Sbjct: 784 PTRSFLETA---VSLHASV-VWKSLYEARTVIIQGSRWQVGSGDTIGIWEDRWLP 834
>gb|EMJ04651.1| hypothetical protein PRUPE_ppa022115mg [Prunus persica]
Length = 1755
Score = 52.4 bits (124), Expect(2) = 8e-10
Identities = 23/54 (42%), Positives = 34/54 (62%)
Frame = +1
Query: 70 KKLSSWKQRRLSQAGRVILINSVVQSISRLLMQCFLLPKSIFHKIGAATRDFFW 231
KKL W+++ LS AG+ +L+ V QSI +M CFLLP+ + H+I F+W
Sbjct: 1192 KKLQGWREQTLSIAGKEVLLKVVAQSIPLYVMSCFLLPQGLCHEIEQMMARFWW 1245
Score = 38.1 bits (87), Expect(2) = 8e-10
Identities = 32/118 (27%), Positives = 48/118 (40%), Gaps = 5/118 (4%)
Frame = +3
Query: 261 WDRICR*K-----GKRVGWAFGLALK**AFISKLGWQLYKEPSRP*VKLIRYKYLRGRRF 425
W+R+C+ K G R AF +A+ ++K GW+L P +L++ KY F
Sbjct: 1259 WERLCKAKTEGGMGFRCLQAFNMAM-----LAKQGWRLVHNPHSLASRLLKAKYFPQTNF 1313
Query: 426 LDNQAHNLPLRSGVGFWLAEISYRLD*GWTMQKTGA*FYSIWDDPWLPGLPNFPLILS 599
+ + P W A L+ G Q IW D W+P F +I S
Sbjct: 1314 WEATLGSRPSCVWKSIWTAR--KVLEMGSRFQIGDGKSVRIWGDKWVPRPATFAVITS 1369
>gb|EMJ18520.1| hypothetical protein PRUPE_ppa019733mg [Prunus persica]
Length = 1275
Score = 52.4 bits (124), Expect(2) = 8e-10
Identities = 23/54 (42%), Positives = 34/54 (62%)
Frame = +1
Query: 70 KKLSSWKQRRLSQAGRVILINSVVQSISRLLMQCFLLPKSIFHKIGAATRDFFW 231
KKL W+++ LS AG+ +L+ V QSI +M CFLLP+ + H+I F+W
Sbjct: 712 KKLQGWREQTLSIAGKEVLLKVVAQSIPLYVMSCFLLPQGLCHEIEQMMARFWW 765
Score = 38.1 bits (87), Expect(2) = 8e-10
Identities = 32/118 (27%), Positives = 48/118 (40%), Gaps = 5/118 (4%)
Frame = +3
Query: 261 WDRICR*K-----GKRVGWAFGLALK**AFISKLGWQLYKEPSRP*VKLIRYKYLRGRRF 425
W+R+C+ K G R AF +A+ ++K GW+L P +L++ KY F
Sbjct: 779 WERLCKAKTEGGMGFRCLQAFNMAM-----LAKQGWRLVHNPHSLASRLLKAKYFPQTNF 833
Query: 426 LDNQAHNLPLRSGVGFWLAEISYRLD*GWTMQKTGA*FYSIWDDPWLPGLPNFPLILS 599
+ + P W A L+ G Q IW D W+P F +I S
Sbjct: 834 WEATLGSRPSCVWKSIWTAR--KVLEMGSRFQIGDGKSVRIWGDKWVPRPATFAVITS 889
>gb|EMJ26294.1| hypothetical protein PRUPE_ppa016563mg, partial [Prunus persica]
Length = 925
Score = 52.4 bits (124), Expect(2) = 2e-09
Identities = 23/54 (42%), Positives = 34/54 (62%)
Frame = +1
Query: 70 KKLSSWKQRRLSQAGRVILINSVVQSISRLLMQCFLLPKSIFHKIGAATRDFFW 231
KKL W+++ LS AG+ +L+ V QSI +M CFLLP+ + H+I F+W
Sbjct: 343 KKLQGWREQTLSIAGKEVLLKVVAQSIPLYVMNCFLLPQGLCHEIEQMMARFWW 396
Score = 37.0 bits (84), Expect(2) = 2e-09
Identities = 32/118 (27%), Positives = 48/118 (40%), Gaps = 5/118 (4%)
Frame = +3
Query: 261 WDRICR*K-----GKRVGWAFGLALK**AFISKLGWQLYKEPSRP*VKLIRYKYLRGRRF 425
W+R+C+ K G R AF +A+ ++K GW+L P +L++ KY F
Sbjct: 410 WERLCKAKTEGGMGFRCLQAFNMAM-----LAKQGWRLVHNPHSLASRLLKAKYFPHTNF 464
Query: 426 LDNQAHNLPLRSGVGFWLAEISYRLD*GWTMQKTGA*FYSIWDDPWLPGLPNFPLILS 599
+ + P W A L+ G Q IW D W+P F +I S
Sbjct: 465 WEATLGSRPSCVWKSIWTAR--KVLEMGSRFQIGDGKSVRIWGDKWVPRPAAFVVITS 520
>gb|ADK92871.1| retrotransposon protein [Hypericum perforatum]
Length = 593
Score = 53.5 bits (127), Expect(2) = 2e-09
Identities = 26/53 (49%), Positives = 34/53 (64%)
Frame = +1
Query: 73 KLSSWKQRRLSQAGRVILINSVVQSISRLLMQCFLLPKSIFHKIGAATRDFFW 231
K SWK R LS+AGR I+I SV+QSIS +M CF LP+ +I +F+W
Sbjct: 15 KFGSWKVRTLSRAGREIMIKSVLQSISTYIMGCFELPEGTCDRIEKMMCNFYW 67
Score = 35.8 bits (81), Expect(2) = 2e-09
Identities = 31/121 (25%), Positives = 53/121 (43%), Gaps = 8/121 (6%)
Frame = +3
Query: 234 SGHHLYLKSWDRICR*KGKRVGWAFGLALK**--AFISKLGWQLYKEPSRP*VKLIRYKY 407
+G ++ +SW+++CR KR G LK A ++K GW+L P+ ++R KY
Sbjct: 72 NGSKMHWRSWEKLCR--SKRNGGLGFRRLKNFNRAMLAKQGWRLLTLPNSLAATILRAKY 129
Query: 408 LRGRRFLDNQAHNLP------LRSGVGFWLAEISYRLD*GWTMQKTGA*FYSIWDDPWLP 569
+ L+ + + G I +R+ G T++ W DPW+P
Sbjct: 130 YPRKSPLEISSSPYSSYTWRSILKGSQLLQKGIEWRIGQGNTVRT--------WSDPWIP 181
Query: 570 G 572
G
Sbjct: 182 G 182
>gb|EEE50691.1| hypothetical protein OsJ_30951 [Oryza sativa Japonica Group]
Length = 697
Score = 46.6 bits (109), Expect(3) = 2e-09
Identities = 22/65 (33%), Positives = 38/65 (58%)
Frame = +1
Query: 37 ESFHRIHGKSEKKLSSWKQRRLSQAGRVILINSVVQSISRLLMQCFLLPKSIFHKIGAAT 216
++F + K + + WK++ LS+AG+ ILI +V Q+I M CF L KS+ ++ +
Sbjct: 284 KTFEYLKEKIWRCIQGWKEKFLSKAGKEILIKAVAQAIPTYAMSCFYLTKSLCDELTSMI 343
Query: 217 RDFFW 231
F+W
Sbjct: 344 LRFWW 348
Score = 32.3 bits (72), Expect(3) = 2e-09
Identities = 21/86 (24%), Positives = 37/86 (43%), Gaps = 6/86 (6%)
Frame = +3
Query: 330 AFISKLGWQLYKEPSRP*VKLIRYKYLRGRRFLDNQAHN------LPLRSGVGFWLAEIS 491
A +++ GW+L + P +L++ KY LD Q+ + G+ +
Sbjct: 385 AMLARQGWRLIQNPDSLCSRLLKAKYFPNCNVLDAQSRKQMSYSWRSILKGIQLLRKGVI 444
Query: 492 YRLD*GWTMQKTGA*FYSIWDDPWLP 569
+R+ G + +IW DPWLP
Sbjct: 445 WRVGNGEHI--------NIWSDPWLP 462
Score = 29.6 bits (65), Expect(3) = 2e-09
Identities = 16/59 (27%), Positives = 28/59 (47%)
Frame = +2
Query: 644 PNTNKWDTGIINHTFPPGVAAAILKMKIPYHEEEPMPWFGHPLRQGISRFKFAYRVQNQ 820
P T +WD +I F A I ++ + +E+ + W P +GI K AY++ +
Sbjct: 486 PTTGQWDIELIQQIFNENDAKIITRIPLREGQEDFIAW--QPDTKGIFSVKSAYKLHEK 542
>gb|EEC66671.1| hypothetical protein OsI_32959 [Oryza sativa Indica Group]
Length = 697
Score = 46.6 bits (109), Expect(3) = 2e-09
Identities = 22/65 (33%), Positives = 38/65 (58%)
Frame = +1
Query: 37 ESFHRIHGKSEKKLSSWKQRRLSQAGRVILINSVVQSISRLLMQCFLLPKSIFHKIGAAT 216
++F + K + + WK++ LS+AG+ ILI +V Q+I M CF L KS+ ++ +
Sbjct: 284 KTFEYLKEKIWRCIQGWKEKFLSKAGKEILIKAVAQAIPTYAMSCFYLTKSLCDELTSMI 343
Query: 217 RDFFW 231
F+W
Sbjct: 344 LRFWW 348
Score = 32.3 bits (72), Expect(3) = 2e-09
Identities = 21/86 (24%), Positives = 37/86 (43%), Gaps = 6/86 (6%)
Frame = +3
Query: 330 AFISKLGWQLYKEPSRP*VKLIRYKYLRGRRFLDNQAHN------LPLRSGVGFWLAEIS 491
A +++ GW+L + P +L++ KY LD Q+ + G+ +
Sbjct: 385 AMLARQGWRLIQNPDSLCSRLLKAKYFPNCNVLDAQSRKQMSYSWRSILKGIQLLRKGVI 444
Query: 492 YRLD*GWTMQKTGA*FYSIWDDPWLP 569
+R+ G + +IW DPWLP
Sbjct: 445 WRVGNGEHI--------NIWSDPWLP 462
Score = 29.6 bits (65), Expect(3) = 2e-09
Identities = 16/59 (27%), Positives = 28/59 (47%)
Frame = +2
Query: 644 PNTNKWDTGIINHTFPPGVAAAILKMKIPYHEEEPMPWFGHPLRQGISRFKFAYRVQNQ 820
P T +WD +I F A I ++ + +E+ + W P +GI K AY++ +
Sbjct: 486 PTTGQWDIELIQQIFNENDAKIITRIPLREGQEDFIAW--QPDTKGIFSVKSAYKLHEK 542
>gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japonica Group]
Length = 1594
Score = 44.7 bits (104), Expect(3) = 4e-09
Identities = 19/55 (34%), Positives = 33/55 (60%)
Frame = +1
Query: 70 KKLSSWKQRRLSQAGRVILINSVVQSISRLLMQCFLLPKSIFHKIGAATRDFFWT 234
+++ WK++ LS+AG+ ILI +V Q+I M CF L K + +I ++W+
Sbjct: 1003 QRIQGWKEKLLSRAGKEILIKAVAQAIPTFAMGCFELTKDLCDQISKMIAKYWWS 1057
Score = 31.6 bits (70), Expect(3) = 4e-09
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = +2
Query: 644 PNTNKWDTGIINHTFPPGVAAAILKMKIPYHEEEPMPWFGHPLRQGISRFKFAYRVQNQ 820
P T WD +++ TF AAI + + E+ + W H +G K AY+VQ +
Sbjct: 1195 PYTGTWDEDLLSQTFWEEDVAAIKSIPVHVEMEDVLAW--HFDARGCFTVKSAYKVQRE 1251
Score = 31.2 bits (69), Expect(3) = 4e-09
Identities = 29/124 (23%), Positives = 56/124 (45%), Gaps = 11/124 (8%)
Frame = +3
Query: 231 DSGHHLYLKSWDRICR*K-----GKRVGWAFGLALK**AFISKLGWQLYKEPSRP*VKLI 395
+ + ++ SW+++ K G R + F LA+ ++K GW+L ++P +++
Sbjct: 1060 EKDNKMHWLSWNKLTLPKNMGGLGFRDIYIFNLAM-----LAKQGWRLIQDPDSLCSRVL 1114
Query: 396 RYKYL-RGRRFLDNQAHNL-----PLRSGVGFWLAEISYRLD*GWTMQKTGA*FYSIWDD 557
R KY G F Q N+ ++ G+ + +R+ G + +IW D
Sbjct: 1115 RAKYFPLGDCFRPKQTSNVSYTWRSIQKGLRVLQNGMIWRMGDGSKI--------NIWAD 1166
Query: 558 PWLP 569
PW+P
Sbjct: 1167 PWIP 1170
>emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1355
Score = 53.9 bits (128), Expect(2) = 4e-09
Identities = 26/54 (48%), Positives = 36/54 (66%)
Frame = +1
Query: 70 KKLSSWKQRRLSQAGRVILINSVVQSISRLLMQCFLLPKSIFHKIGAATRDFFW 231
KKL WK++ LS+AG+ IL+ SV+Q+I LM + LP SI KI +A F+W
Sbjct: 778 KKLQGWKEKLLSRAGKEILLKSVIQAIPTYLMGVYKLPCSIIQKIHSAMARFWW 831
Score = 34.3 bits (77), Expect(2) = 4e-09
Identities = 28/117 (23%), Positives = 47/117 (40%), Gaps = 5/117 (4%)
Frame = +3
Query: 231 DSGHHLYLKSWDRICR*K-----GKRVGWAFGLALK**AFISKLGWQLYKEPSRP*VKLI 395
D+ ++ K+WD +C K G R F AL + + W+L +EP +++
Sbjct: 835 DTQRRIHWKNWDSLCTLKCFGGMGFRDLRVFNDAL-----LGRQAWRLVREPHSLLARVM 889
Query: 396 RYKYLRGRRFLDNQAHNLPLRSGVGFWLAEISYRLD*GWTMQKTGA*FYSIWDDPWL 566
+ KY FLD S W ++ + W + IW+DPW+
Sbjct: 890 KAKYYSNHDFLDAPLGVSTSYSWRSIWSSKALLKEGMVWRIGNGTN--VRIWEDPWV 944
>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1621
Score = 44.7 bits (104), Expect(3) = 5e-09
Identities = 19/55 (34%), Positives = 33/55 (60%)
Frame = +1
Query: 70 KKLSSWKQRRLSQAGRVILINSVVQSISRLLMQCFLLPKSIFHKIGAATRDFFWT 234
+++ WK++ LS+AG+ ILI +V Q+I M CF L K + +I ++W+
Sbjct: 1030 QRIQGWKEKLLSRAGKEILIKAVAQAIPTFAMGCFELTKDLCDQISKMIAKYWWS 1084
Score = 31.6 bits (70), Expect(3) = 5e-09
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = +2
Query: 644 PNTNKWDTGIINHTFPPGVAAAILKMKIPYHEEEPMPWFGHPLRQGISRFKFAYRVQNQ 820
P T WD +++ TF AAI + + E+ + W H +G K AY+VQ +
Sbjct: 1222 PYTGTWDEDLLSQTFWEEDVAAIKSIPVHVEMEDVLAW--HFDARGCFTVKSAYKVQRE 1278
Score = 30.8 bits (68), Expect(3) = 5e-09
Identities = 29/124 (23%), Positives = 56/124 (45%), Gaps = 11/124 (8%)
Frame = +3
Query: 231 DSGHHLYLKSWDRICR*K-----GKRVGWAFGLALK**AFISKLGWQLYKEPSRP*VKLI 395
+ + ++ SW+++ K G R + F LA+ ++K GW+L ++P +++
Sbjct: 1087 EKDNKMHWLSWNKLTLPKNMGGLGFRDIYIFNLAM-----LAKQGWRLIQDPDSLCSRVL 1141
Query: 396 RYKYL-RGRRFLDNQAHNL-----PLRSGVGFWLAEISYRLD*GWTMQKTGA*FYSIWDD 557
R KY G F Q N+ ++ G+ + +R+ G + +IW D
Sbjct: 1142 RAKYFPLGDCFRPKQTSNVSYTWRSIQKGLRVLQNGMIWRVGDGSKI--------NIWAD 1193
Query: 558 PWLP 569
PW+P
Sbjct: 1194 PWIP 1197
>ref|XP_004305156.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 813
Score = 47.4 bits (111), Expect(2) = 5e-09
Identities = 24/53 (45%), Positives = 32/53 (60%)
Frame = +1
Query: 37 ESFHRIHGKSEKKLSSWKQRRLSQAGRVILINSVVQSISRLLMQCFLLPKSIF 195
E+F I + KKL W+ + LS AG+ ILI V Q++ M CFLLPKS +
Sbjct: 264 ETFAFIKERLSKKLEGWQGKLLSGAGKGILIRVVAQALPSYSMSCFLLPKSFY 316
Score = 40.4 bits (93), Expect(2) = 5e-09
Identities = 33/107 (30%), Positives = 47/107 (43%), Gaps = 3/107 (2%)
Frame = +3
Query: 258 SWDRICR*KGKRVGWAF-GLALK**AFISKLGWQLYKEPSRP*VKLIRYKYLRGRRFLDN 434
SW+++CR K +R G F L A ++K GW++ + P +L R +Y F
Sbjct: 341 SWEKLCRPK-ERGGMGFRDLYAHNIAMLAKQGWRILQFPDSLVARLFRARYFPSSSFWSA 399
Query: 435 QAHNLPLRSGVGFW--LAEISYRLD*GWTMQKTGA*FYSIWDDPWLP 569
A + G W +AE L G Q IW+DPWLP
Sbjct: 400 TATD-----GSACWKGIAEARSVLARGMRWQVGDGTRVCIWEDPWLP 441
>gb|ABN08038.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
truncatula]
Length = 573
Score = 45.4 bits (106), Expect(3) = 5e-09
Identities = 21/54 (38%), Positives = 30/54 (55%)
Frame = +1
Query: 70 KKLSSWKQRRLSQAGRVILINSVVQSISRLLMQCFLLPKSIFHKIGAATRDFFW 231
KK SW R LS+A + +LI SV Q+I M FL+P S+ ++ F+W
Sbjct: 305 KKCQSWSVRSLSRADKEVLIKSVAQAIPSYCMGAFLIPASLCEELERMMNSFYW 358
Score = 33.5 bits (75), Expect(3) = 5e-09
Identities = 19/82 (23%), Positives = 34/82 (41%)
Frame = +3
Query: 330 AFISKLGWQLYKEPSRP*VKLIRYKYLRGRRFLDNQAHNLPLRSGVGFWLAEISYRLD*G 509
+ + K GW+L + S ++++ KY R FLD + P + W + L
Sbjct: 396 SMLGKQGWKLLSDSSSLFTRILKAKYFPRRDFLDATLGHNPSYTWRSLWSTQSLLTLGHR 455
Query: 510 WTMQKTGA*FYSIWDDPWLPGL 575
W + ++W PW+ L
Sbjct: 456 WKIGDGSK--INVWSMPWIRNL 475
Score = 28.1 bits (61), Expect(3) = 5e-09
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +2
Query: 590 NPKLYSEDSPLPLRNIMLPNTNKWDTGIINHTFPPGVAAAIL 715
+P L+ D L + +++ + N WDT ++ F AAAIL
Sbjct: 483 SPPLHQHD--LTVNSLLSADFNSWDTTLVQSLFNDAEAAAIL 522
>ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621413 [Citrus sinensis]
Length = 2303
Score = 42.7 bits (99), Expect(3) = 8e-09
Identities = 23/86 (26%), Positives = 39/86 (45%)
Frame = +1
Query: 43 FHRIHGKSEKKLSSWKQRRLSQAGRVILINSVVQSISRLLMQCFLLPKSIFHKIGAATRD 222
F + + K+++W+ + S G+ ILI +V Q++ M F LPK + +I +
Sbjct: 742 FREVKLRVLSKINNWQHKMFSSGGKEILIKAVAQAVPAYAMSVFKLPKGLCEEIQSEIAK 801
Query: 223 FFWTVATIFT*NLGIEFVDKKGSGWA 300
F+W DK+G WA
Sbjct: 802 FWWGSKK-----------DKRGIHWA 816
Score = 34.7 bits (78), Expect(3) = 8e-09
Identities = 30/124 (24%), Positives = 51/124 (41%), Gaps = 6/124 (4%)
Frame = +2
Query: 458 VWSGILASRDIIQAGLRLDYAKDWGLIL*YLG*SMATWAPKFPPNPKLYSEDSP--LPLR 631
+W IL R +IQ G R G ++ + + P P + SP LP+
Sbjct: 884 IWRSILWGRQVIQKGARWRIGN---------GSNILVYKDNWIPRPDTFKPISPPTLPID 934
Query: 632 NI---MLPNTNKWDTGIINHTFPPGVAAAILKMKIPYHEE-EPMPWFGHPLRQGISRFKF 799
++ + N W+ +N F AILK+ +P ++ + M W H + G K
Sbjct: 935 TTVGELMDDENNWNVAKLNQHFMQEDTEAILKIPLPRSQKVDEMMW--HYDKHGEYSVKS 992
Query: 800 AYRV 811
Y++
Sbjct: 993 GYQI 996
Score = 28.9 bits (63), Expect(3) = 8e-09
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +3
Query: 330 AFISKLGWQLYKEPSRP*VKLIRYKYLRGRRFLDNQAHNLP 452
A ++K GW+L + P+ K++R +Y + FLD + + P
Sbjct: 841 AMVAKQGWRLIQFPNSLVSKVLRARYFKSCSFLDAKPGSNP 881
>gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza sativa Japonica Group]
Length = 1509
Score = 43.5 bits (101), Expect(3) = 1e-08
Identities = 19/55 (34%), Positives = 32/55 (58%)
Frame = +1
Query: 70 KKLSSWKQRRLSQAGRVILINSVVQSISRLLMQCFLLPKSIFHKIGAATRDFFWT 234
+++ WK++ LS+AG+ ILI +V Q I M CF L K + +I ++W+
Sbjct: 975 QRIQGWKEKLLSRAGKEILIKAVAQVIPTFAMGCFELTKDLCDQISKMIAKYWWS 1029
Score = 31.6 bits (70), Expect(3) = 1e-08
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = +2
Query: 644 PNTNKWDTGIINHTFPPGVAAAILKMKIPYHEEEPMPWFGHPLRQGISRFKFAYRVQNQ 820
P T WD +++ TF AAI + + E+ + W H +G K AY+VQ +
Sbjct: 1167 PYTGTWDEDLLSQTFWEEDVAAIKSIPVHVEMEDVLAW--HFDARGCFTVKSAYKVQRE 1223
Score = 30.8 bits (68), Expect(3) = 1e-08
Identities = 29/124 (23%), Positives = 56/124 (45%), Gaps = 11/124 (8%)
Frame = +3
Query: 231 DSGHHLYLKSWDRICR*K-----GKRVGWAFGLALK**AFISKLGWQLYKEPSRP*VKLI 395
+ + ++ SW+++ K G R + F LA+ ++K GW+L ++P +++
Sbjct: 1032 EKDNKMHWLSWNKLTLPKNMGGLGFRDIYIFNLAM-----LAKQGWRLIQDPDSLCSRVL 1086
Query: 396 RYKYL-RGRRFLDNQAHNL-----PLRSGVGFWLAEISYRLD*GWTMQKTGA*FYSIWDD 557
R KY G F Q N+ ++ G+ + +R+ G + +IW D
Sbjct: 1087 RAKYFPLGDCFRPKQTSNVSYTWRSIQKGLRVLQNGMIWRVGDGSKI--------NIWAD 1138
Query: 558 PWLP 569
PW+P
Sbjct: 1139 PWIP 1142
>gb|AAP53315.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1505
Score = 43.5 bits (101), Expect(3) = 1e-08
Identities = 19/55 (34%), Positives = 32/55 (58%)
Frame = +1
Query: 70 KKLSSWKQRRLSQAGRVILINSVVQSISRLLMQCFLLPKSIFHKIGAATRDFFWT 234
+++ WK++ LS+AG+ ILI +V Q I M CF L K + +I ++W+
Sbjct: 971 QRIQGWKEKLLSRAGKEILIKAVAQVIPTFAMGCFELTKDLCDQISKMIAKYWWS 1025
Score = 31.6 bits (70), Expect(3) = 1e-08
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = +2
Query: 644 PNTNKWDTGIINHTFPPGVAAAILKMKIPYHEEEPMPWFGHPLRQGISRFKFAYRVQNQ 820
P T WD +++ TF AAI + + E+ + W H +G K AY+VQ +
Sbjct: 1163 PYTGTWDEDLLSQTFWEEDVAAIKSIPVHVEMEDVLAW--HFDARGCFTVKSAYKVQRE 1219
Score = 30.8 bits (68), Expect(3) = 1e-08
Identities = 29/124 (23%), Positives = 56/124 (45%), Gaps = 11/124 (8%)
Frame = +3
Query: 231 DSGHHLYLKSWDRICR*K-----GKRVGWAFGLALK**AFISKLGWQLYKEPSRP*VKLI 395
+ + ++ SW+++ K G R + F LA+ ++K GW+L ++P +++
Sbjct: 1028 EKDNKMHWLSWNKLTLPKNMGGLGFRDIYIFNLAM-----LAKQGWRLIQDPDSLCSRVL 1082
Query: 396 RYKYL-RGRRFLDNQAHNL-----PLRSGVGFWLAEISYRLD*GWTMQKTGA*FYSIWDD 557
R KY G F Q N+ ++ G+ + +R+ G + +IW D
Sbjct: 1083 RAKYFPLGDCFRPKQTSNVSYTWRSIQKGLRVLQNGMIWRVGDGSKI--------NIWAD 1134
Query: 558 PWLP 569
PW+P
Sbjct: 1135 PWIP 1138
>ref|XP_004296207.1| PREDICTED: uncharacterized protein LOC101297422 [Fragaria vesca
subsp. vesca]
Length = 1096
Score = 45.8 bits (107), Expect(2) = 1e-08
Identities = 21/66 (31%), Positives = 37/66 (56%)
Frame = +1
Query: 34 DESFHRIHGKSEKKLSSWKQRRLSQAGRVILINSVVQSISRLLMQCFLLPKSIFHKIGAA 213
+++F + + K+ W+ + L+ AG+ +LI +VVQSI +M CF LPK + +
Sbjct: 527 EKAFSFLCERIRKRTQGWRDKTLTIAGKEVLIKAVVQSIPTYIMSCFELPKHMCSAMQRL 586
Query: 214 TRDFFW 231
F+W
Sbjct: 587 MARFWW 592
Score = 40.8 bits (94), Expect(2) = 1e-08
Identities = 26/107 (24%), Positives = 51/107 (47%), Gaps = 3/107 (2%)
Frame = +3
Query: 258 SWDRICR*KGKRVGWAFGLALK**AFISKLGWQLYKEPSRP*VKLIRYKYLRGRRFLDNQ 437
+W+++C K + + L A ++K GW+L ++P+ ++++ +Y F++ +
Sbjct: 605 AWEKLCTTKAEGGLGFRDMRLFNMALLAKQGWRLIRQPNSLLAQVLKARYFPSESFMEAE 664
Query: 438 AHNLPLRSGVGF-WLAEISYR--LD*GWTMQKTGA*FYSIWDDPWLP 569
+ G F W + + R L G Q S+WDDPW+P
Sbjct: 665 -----VAKGCSFTWRSILKGRDLLKKGLRFQVGNGESISVWDDPWIP 706
>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
At1g65750-like [Vitis vinifera]
Length = 820
Score = 50.4 bits (119), Expect(2) = 1e-08
Identities = 24/63 (38%), Positives = 35/63 (55%)
Frame = +1
Query: 43 FHRIHGKSEKKLSSWKQRRLSQAGRVILINSVVQSISRLLMQCFLLPKSIFHKIGAATRD 222
F + K ++ +W RRLS+AG+ I + +V QSI +MQ LLPK + I +
Sbjct: 233 FEFVRRKVWNRIQNWNGRRLSRAGKEICLKTVAQSIPTYVMQLLLLPKDLCRDIESMMNG 292
Query: 223 FFW 231
FFW
Sbjct: 293 FFW 295
Score = 36.2 bits (82), Expect(2) = 1e-08
Identities = 31/130 (23%), Positives = 52/130 (40%), Gaps = 8/130 (6%)
Frame = +3
Query: 216 SGFLLDSG---HHLYLKSWDRICR*K-----GKRVGWAFGLALK**AFISKLGWQLYKEP 371
+GF DS + SW ++C+ K G R F LAL ++K GW+ + P
Sbjct: 291 NGFFWDSNPQCRSIRWMSWGKMCKQKKDGGLGFRKLXDFNLAL-----LAKQGWRFLRNP 345
Query: 372 SRP*VKLIRYKYLRGRRFLDNQAHNLPLRSGVGFWLAEISYRLD*GWTMQKTGA*FYSIW 551
++ + +Y R FL+ + + P A+ + W++ +W
Sbjct: 346 DSLVTRIFQARYFRNSSFLNAELGSNPSYMWRSILAAQGLLKRGCYWSIASGTK--VQVW 403
Query: 552 DDPWLPGLPN 581
D WLP N
Sbjct: 404 GDSWLPDSSN 413