BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00016495
         (2102 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278886.1| PREDICTED: pentatricopeptide repeat-containi...   611   e-172
ref|XP_006431260.1| hypothetical protein CICLE_v10011308mg [Citr...   593   e-166
ref|XP_002305377.2| hypothetical protein POPTR_0004s12430g [Popu...   590   e-165
ref|XP_006482717.1| PREDICTED: pentatricopeptide repeat-containi...   587   e-165
gb|EOY03563.1| Tetratricopeptide repeat (TPR)-like superfamily p...   578   e-162
gb|EMJ18478.1| hypothetical protein PRUPE_ppa017633mg [Prunus pe...   577   e-162
ref|XP_002532904.1| pentatricopeptide repeat-containing protein,...   568   e-159
gb|EXB38041.1| hypothetical protein L484_020960 [Morus notabilis]     567   e-159
ref|XP_006338411.1| PREDICTED: pentatricopeptide repeat-containi...   561   e-157
ref|XP_004134328.1| PREDICTED: pentatricopeptide repeat-containi...   559   e-156
ref|XP_004232191.1| PREDICTED: pentatricopeptide repeat-containi...   557   e-156
ref|XP_004306116.1| PREDICTED: pentatricopeptide repeat-containi...   553   e-155
ref|XP_003530418.1| PREDICTED: pentatricopeptide repeat-containi...   545   e-152
ref|XP_003552546.1| PREDICTED: pentatricopeptide repeat-containi...   540   e-151
gb|ESW11550.1| hypothetical protein PHAVU_008G039700g [Phaseolus...   538   e-150
ref|XP_006290777.1| hypothetical protein CARUB_v10016882mg [Caps...   534   e-149
ref|XP_006395295.1| hypothetical protein EUTSA_v10003866mg [Eutr...   532   e-148
ref|XP_002875497.1| pentatricopeptide repeat-containing protein ...   530   e-148
ref|NP_189568.1| pentatricopeptide repeat-containing protein [Ar...   529   e-147
ref|XP_003621319.1| Pentatricopeptide repeat-containing protein ...   518   e-144

>ref|XP_002278886.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230
            [Vitis vinifera]
          Length = 594

 Score =  611 bits (1575), Expect = e-172
 Identities = 282/464 (60%), Positives = 362/464 (78%)
 Frame = +3

Query: 3    ACSDQSWFKVVTLINTHLIKYGLFDDVLILNSLVNSYLNCGLMGFCLAEKLFSIMVDRDA 182
            ACS + W +VV +I+  + K G   D+ + NSL++SY  CGL G   A K+F +M +RD 
Sbjct: 124  ACSGKVWVRVVEMIHAQVEKMGFCLDIFVPNSLIDSYFKCGLDGVAAARKVFEVMAERDT 183

Query: 183  VTYNCMLSGLVKVGKLDEALKLFDEMPERDTVSWNIVLDGYVRSGDLNLAIELFEKMPSR 362
            V++N M+ GLVKVG+L EA +LFDEMPERDTVSWN +LDGYV++G++N A ELFEKMP+R
Sbjct: 184  VSWNSMIGGLVKVGELGEARRLFDEMPERDTVSWNTILDGYVKAGEMNAAFELFEKMPAR 243

Query: 363  DSVSWCTLISGYSKSGDLKTARILFEKMPAKNLVAWTTIIAAYAAKGIVKEAIALYDQMQ 542
            + VSW T++ GYSK+GD+  ARILF+KMP KNLV WT +I+ YA KG+ K+AI LY+QM+
Sbjct: 244  NVVSWSTMVLGYSKAGDMDMARILFDKMPVKNLVPWTIMISGYAEKGLAKDAINLYNQME 303

Query: 543  VASMKPDEGTIIGILAACAASGVLGLGERIHYSLNKSGYRCSTRVLNTLIDMYAKCGSLN 722
             A +K D+GT+I IL+ACA SG+LGLG+R+H S+ ++ ++CST V N LIDMYAKCGSL 
Sbjct: 304  EAGLKFDDGTVISILSACAVSGLLGLGKRVHASIERTRFKCSTPVSNALIDMYAKCGSLE 363

Query: 723  GALTIFNGMEKKDITSWSTMIHASAIHGHGEMALHLFSKMKQEGFAPDRVTFIGILSACN 902
             AL+IF+GM +KD+ SW+ +I   A+HGHGE AL LFS+MK EGF PD+VTF+G+L AC 
Sbjct: 364  NALSIFHGMVRKDVVSWNAIIQGLAMHGHGEKALQLFSRMKGEGFVPDKVTFVGVLCACT 423

Query: 903  HTGLVDEGIHLFYTMEKDYGVVPEIVHYGCMIDLLGRGGRLKEAFRLVQNMPFEPNNKIW 1082
            H G VDEG+H F+ ME+DYGV PE+ HYGCM+DLLGRGGRLKEAFRLV +MP EPN  IW
Sbjct: 424  HAGFVDEGLHYFHAMERDYGVPPEVEHYGCMVDLLGRGGRLKEAFRLVHSMPLEPNAIIW 483

Query: 1083 GALIGACRKHYAVALAEEELKHLLQLDFTDSGSLSMLSSIYAISGDWNNFANARLRMRNI 1262
            G L+GACR H A  LAEE    L++ + +DSG+LSMLS+IYA +GDW+NFAN RLRM++ 
Sbjct: 484  GTLLGACRMHSATGLAEEVFDRLVKSELSDSGNLSMLSNIYAAAGDWDNFANIRLRMKST 543

Query: 1263 GCGKPSGASSVEVDNEFHEFTAMDQSHPKCDMVYEMIDGLTQHI 1394
               KPSG SS+EVD+E HEFT  D+SHPK D +Y+ IDGL QHI
Sbjct: 544  SIQKPSGGSSIEVDDEVHEFTVFDRSHPKSDRIYKTIDGLGQHI 587



 Score = 72.4 bits (176), Expect = 7e-10
 Identities = 88/373 (23%), Positives = 154/373 (41%), Gaps = 17/373 (4%)
 Frame = +3

Query: 360  RDSVSWCTLISGYSKSGDLKTARILFEKMPAKNLVAWTTIIAAYAAKGIVKEAIALYDQM 539
            R+S     LI+ +S    +  A  +F ++   +++ + T+I A+        A +++ +M
Sbjct: 47   RESFVGQKLIAAFSLCRQMTLAVNVFNQIQDPDVLLYNTLIRAHVRNSEPLLAFSVFFEM 106

Query: 540  QVASMKPDEGTIIGILAACAASGVLGLGERIHYSLNKSGYRCSTRVLNTLIDMYAKCG-- 713
            Q + +  D  T   +L AC+    + + E IH  + K G+     V N+LID Y KCG  
Sbjct: 107  QDSGVCADNFTYPFLLKACSGKVWVRVVEMIHAQVEKMGFCLDIFVPNSLIDSYFKCGLD 166

Query: 714  SLNGALTIFNGMEKKDITSWSTMIHASAIHGHGEMALHLFSKMKQEGFAPDRVTFIGILS 893
             +  A  +F  M ++D  SW++MI      G    A  LF +M +     D V++  IL 
Sbjct: 167  GVAAARKVFEVMAERDTVSWNSMIGGLVKVGELGEARRLFDEMPER----DTVSWNTILD 222

Query: 894  ACNHTGLVDEGIHLFYTMEKDYGVVPEIVHYGCMIDLLGRGGRLKEAFRLVQNMPFEPNN 1073
                 G ++    LF  M         +V +  M+    + G +  A  L   MP + N 
Sbjct: 223  GYVKAGEMNAAFELFEKMP-----ARNVVSWSTMVLGYSKAGDMDMARILFDKMPVK-NL 276

Query: 1074 KIWGALIGACRKHYAVALAEEELKHLLQLDFT----DSGSLSMLSSIYAISG--DWNNFA 1235
              W  +I     +    LA++ +    Q++      D G++  + S  A+SG        
Sbjct: 277  VPWTIMISG---YAEKGLAKDAINLYNQMEEAGLKFDDGTVISILSACAVSGLLGLGKRV 333

Query: 1236 NARLRMRNIGCGKPSGASSVE-------VDNEFHEFTAMDQSHPKCDMV--YEMIDGLTQ 1388
            +A +      C  P   + ++       ++N    F  M +     D+V    +I GL  
Sbjct: 334  HASIERTRFKCSTPVSNALIDMYAKCGSLENALSIFHGMVRK----DVVSWNAIIQGLAM 389

Query: 1389 HIKMRAAGHGAEA 1427
            H      GHG +A
Sbjct: 390  H------GHGEKA 396


>ref|XP_006431260.1| hypothetical protein CICLE_v10011308mg [Citrus clementina]
            gi|557533317|gb|ESR44500.1| hypothetical protein
            CICLE_v10011308mg [Citrus clementina]
          Length = 614

 Score =  593 bits (1528), Expect = e-166
 Identities = 272/474 (57%), Positives = 365/474 (77%)
 Frame = +3

Query: 3    ACSDQSWFKVVTLINTHLIKYGLFDDVLILNSLVNSYLNCGLMGFCLAEKLFSIMVDRDA 182
            AC+ ++WF +V +I+  + K G F D+ + NSL++SY  CG++G  LA+KLF  M +RD 
Sbjct: 133  ACNGKNWFHLVQMIHALIYKCGYFGDIFVPNSLIDSYSKCGVVGVSLAKKLFMSMGERDI 192

Query: 183  VTYNCMLSGLVKVGKLDEALKLFDEMPERDTVSWNIVLDGYVRSGDLNLAIELFEKMPSR 362
            V++N M++GLVK G+L EA +LFDEMPERD VSWN +LDGY ++G++NLA ELFEK+P R
Sbjct: 193  VSWNSMIAGLVKGGELSEARRLFDEMPERDAVSWNTILDGYAKAGEMNLAFELFEKIPHR 252

Query: 363  DSVSWCTLISGYSKSGDLKTARILFEKMPAKNLVAWTTIIAAYAAKGIVKEAIALYDQMQ 542
            + VSW T++ GYSK GD++ A++LF++MPAK LV WT II+ YA KG+ KEA  LYDQM+
Sbjct: 253  NIVSWSTMVWGYSKDGDMEMAKLLFDRMPAKTLVPWTIIISGYAEKGMAKEAARLYDQME 312

Query: 543  VASMKPDEGTIIGILAACAASGVLGLGERIHYSLNKSGYRCSTRVLNTLIDMYAKCGSLN 722
             A +KPD+GT+I ILAAC  SG+LGLG ++H S+NK  ++C+T V N L+DMYAKCGSL+
Sbjct: 313  EAGLKPDDGTLISILAACTESGLLGLGMKVHASINKYRFKCNTNVCNALVDMYAKCGSLD 372

Query: 723  GALTIFNGMEKKDITSWSTMIHASAIHGHGEMALHLFSKMKQEGFAPDRVTFIGILSACN 902
             A+++FNGM KKD+ SW+ M++  A+HG GE AL LFS+MK EGF PD+ TF+G+L AC 
Sbjct: 373  NAMSVFNGMTKKDLVSWNAMLYGLAMHGQGEKALGLFSRMKDEGFGPDKYTFVGVLCACT 432

Query: 903  HTGLVDEGIHLFYTMEKDYGVVPEIVHYGCMIDLLGRGGRLKEAFRLVQNMPFEPNNKIW 1082
            H G +D+G+  FY+ME+DYG++P++ HYGCMIDLLGR GRLKEA RLVQ+MP EPN  IW
Sbjct: 433  HAGFIDKGVQYFYSMERDYGILPQVEHYGCMIDLLGRSGRLKEALRLVQSMPVEPNAIIW 492

Query: 1083 GALIGACRKHYAVALAEEELKHLLQLDFTDSGSLSMLSSIYAISGDWNNFANARLRMRNI 1262
            G L+GACRKH AV LA+E L  L++L  +D G+ +MLS+I+A +GDWN  AN RL+M+  
Sbjct: 493  GTLLGACRKHNAVELADEVLDCLIRLKGSDPGNYTMLSNIFAATGDWNKVANVRLQMKKT 552

Query: 1263 GCGKPSGASSVEVDNEFHEFTAMDQSHPKCDMVYEMIDGLTQHIKMRAAGHGAE 1424
            G  KPSGASSVEVDNE HEF+  DQ HPK + +Y+MI+ L + +K    GH A+
Sbjct: 553  GAQKPSGASSVEVDNEVHEFSVCDQLHPKSEQIYQMINTLGKDLK--PVGHAAK 604



 Score = 66.6 bits (161), Expect = 4e-08
 Identities = 66/253 (26%), Positives = 107/253 (42%), Gaps = 6/253 (2%)
 Frame = +3

Query: 318  DLNLAIELFEKMPS----RDSVSWCTLISGYSKSGDLKTARILFEKMPAKNLVAWTTIIA 485
            +LN   +LF ++      RD      LIS  +    +  A  +F  +   ++  + T+I 
Sbjct: 38   NLNQTKQLFAQIIKLDLQRDPYIAPKLISSLALCRQMGLAIKVFNDIQDPDVHLYNTLIR 97

Query: 486  AYAAKGIVKEAIALYDQMQVASMKPDEGTIIGILAACAASGVLGLGERIHYSLNKSGYRC 665
            A     +  +A  ++  MQ   +  D  T   +L AC       L + IH  + K GY  
Sbjct: 98   ACVQNSLNAQAFRVFLDMQEKGVFTDNFTYPFLLKACNGKNWFHLVQMIHALIYKCGYFG 157

Query: 666  STRVLNTLIDMYAKCGSLNGALT--IFNGMEKKDITSWSTMIHASAIHGHGEMALHLFSK 839
               V N+LID Y+KCG +  +L   +F  M ++DI SW++MI      G    A  LF +
Sbjct: 158  DIFVPNSLIDSYSKCGVVGVSLAKKLFMSMGERDIVSWNSMIAGLVKGGELSEARRLFDE 217

Query: 840  MKQEGFAPDRVTFIGILSACNHTGLVDEGIHLFYTMEKDYGVVPEIVHYGCMIDLLGRGG 1019
            M +     D V++  IL      G ++    LF  +         IV +  M+    + G
Sbjct: 218  MPER----DAVSWNTILDGYAKAGEMNLAFELFEKIPH-----RNIVSWSTMVWGYSKDG 268

Query: 1020 RLKEAFRLVQNMP 1058
             ++ A  L   MP
Sbjct: 269  DMEMAKLLFDRMP 281


>ref|XP_002305377.2| hypothetical protein POPTR_0004s12430g [Populus trichocarpa]
            gi|550340897|gb|EEE85888.2| hypothetical protein
            POPTR_0004s12430g [Populus trichocarpa]
          Length = 604

 Score =  590 bits (1520), Expect = e-165
 Identities = 271/465 (58%), Positives = 357/465 (76%)
 Frame = +3

Query: 3    ACSDQSWFKVVTLINTHLIKYGLFDDVLILNSLVNSYLNCGLMGFCLAEKLFSIMVDRDA 182
            AC  QSW  +V +I+ HL KYG F D+ + NSL++SY  CGL+G   A +LF +M +RD 
Sbjct: 130  ACDGQSWLPLVKMIHNHLEKYGFFQDLFVPNSLIDSYCKCGLLGVKSAMRLFKVMDERDV 189

Query: 183  VTYNCMLSGLVKVGKLDEALKLFDEMPERDTVSWNIVLDGYVRSGDLNLAIELFEKMPSR 362
            V++N M+ GL+KVG+L EA KLFDEMP +D VSWN +LDGYV++G++N A  LFE MP R
Sbjct: 190  VSWNSMIRGLLKVGELSEACKLFDEMPMKDAVSWNTILDGYVKAGEMNKAFGLFESMPER 249

Query: 363  DSVSWCTLISGYSKSGDLKTARILFEKMPAKNLVAWTTIIAAYAAKGIVKEAIALYDQMQ 542
            + VSW T++SGY K+GD++ AR+LF++MP KNLV+WT I++ YA KG+ K+AI  ++QM+
Sbjct: 250  NVVSWSTMVSGYCKAGDMEMARMLFDRMPVKNLVSWTIIVSGYAVKGLAKDAIRSFEQME 309

Query: 543  VASMKPDEGTIIGILAACAASGVLGLGERIHYSLNKSGYRCSTRVLNTLIDMYAKCGSLN 722
             A +KPD+GTII ILA+CA SG+LGLG+R+H S+ +  Y+CS  V N L+DMYAKCG ++
Sbjct: 310  EAGLKPDDGTIISILASCAESGLLGLGKRVHTSIERIRYKCSVNVSNALVDMYAKCGQVD 369

Query: 723  GALTIFNGMEKKDITSWSTMIHASAIHGHGEMALHLFSKMKQEGFAPDRVTFIGILSACN 902
             AL++FNGM KKD+ SW+ M+   A+HGHGE AL LFS M+QEGF PD+VT + +L AC 
Sbjct: 370  RALSVFNGMSKKDLVSWNCMLQGLAMHGHGEKALQLFSIMRQEGFRPDKVTLVAVLCACV 429

Query: 903  HTGLVDEGIHLFYTMEKDYGVVPEIVHYGCMIDLLGRGGRLKEAFRLVQNMPFEPNNKIW 1082
            H G VDEGI  F  ME+DYG+VP I HYGCM+DLLGRGGRLKEA+RLVQ+MP EPN  IW
Sbjct: 430  HAGFVDEGIRYFNNMERDYGIVPHIEHYGCMVDLLGRGGRLKEAYRLVQSMPVEPNVVIW 489

Query: 1083 GALIGACRKHYAVALAEEELKHLLQLDFTDSGSLSMLSSIYAISGDWNNFANARLRMRNI 1262
            G L+GACR H AV LAEE L  L +L+ +D G+ S+LS+I+A +GDW++ AN RL+M+N 
Sbjct: 490  GTLLGACRMHNAVGLAEEVLDCLFKLEPSDPGNYSLLSNIFASAGDWSSVANVRLQMKNF 549

Query: 1263 GCGKPSGASSVEVDNEFHEFTAMDQSHPKCDMVYEMIDGLTQHIK 1397
            G  KPSGASS+EVD+E HEFT  D+SHPK D +Y+MI+ L   +K
Sbjct: 550  GIQKPSGASSIEVDDEVHEFTVFDKSHPKSDKIYQMINRLGLDLK 594



 Score = 84.7 bits (208), Expect = 1e-13
 Identities = 78/285 (27%), Positives = 130/285 (45%), Gaps = 7/285 (2%)
 Frame = +3

Query: 384  LISGYSKSGDLKTARILFEKMPAKNLVAWTTIIAAYAAKGIVKEAIALYDQMQVASMKPD 563
            LIS +S S ++  A  +F+++P  N+  + T I A         A   + +MQ   +  D
Sbjct: 61   LISAFSLSQEMTLAINVFKQIPDPNVHLYNTFIRACVQNSHSLLAFETFFEMQRNGLFAD 120

Query: 564  EGTIIGILAACAASGVLGLGERIHYSLNKSGYRCSTRVLNTLIDMYAKCGSL--NGALTI 737
              T   +L AC     L L + IH  L K G+     V N+LID Y KCG L    A+ +
Sbjct: 121  NFTYPFLLKACDGQSWLPLVKMIHNHLEKYGFFQDLFVPNSLIDSYCKCGLLGVKSAMRL 180

Query: 738  FNGMEKKDITSWSTMIHASAIHGHGEMALHLFSKMKQEGFAPDRVTFIGILSACNHTGLV 917
            F  M+++D+ SW++MI      G    A  LF +M  +    D V++  IL      G +
Sbjct: 181  FKVMDERDVVSWNSMIRGLLKVGELSEACKLFDEMPMK----DAVSWNTILDGYVKAGEM 236

Query: 918  DEGIHLFYTMEKDYGVVPEIVHYGCMIDLLGRGGRLKEAFRLVQNMPFEPNNKIWGALIG 1097
            ++   LF +M +       +V +  M+    + G ++ A  L   MP + N   W  ++ 
Sbjct: 237  NKAFGLFESMPE-----RNVVSWSTMVSGYCKAGDMEMARMLFDRMPVK-NLVSWTIIVS 290

Query: 1098 ACRKHYAV-ALAEEELKHLLQLDFT----DSGSLSMLSSIYAISG 1217
                 YAV  LA++ ++   Q++      D G++  + +  A SG
Sbjct: 291  G----YAVKGLAKDAIRSFEQMEEAGLKPDDGTIISILASCAESG 331


>ref|XP_006482717.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230-like
            [Citrus sinensis]
          Length = 614

 Score =  587 bits (1512), Expect = e-165
 Identities = 272/474 (57%), Positives = 362/474 (76%)
 Frame = +3

Query: 3    ACSDQSWFKVVTLINTHLIKYGLFDDVLILNSLVNSYLNCGLMGFCLAEKLFSIMVDRDA 182
            AC+ ++WF +V +I+  + K G F D+ + NSL++SY  CG +G  LA+KLF  M +RD 
Sbjct: 133  ACNGKNWFHLVQMIHALIYKCGYFGDIFVPNSLIDSYSKCGAVGVSLAKKLFMSMGERDI 192

Query: 183  VTYNCMLSGLVKVGKLDEALKLFDEMPERDTVSWNIVLDGYVRSGDLNLAIELFEKMPSR 362
            V++N M++GLVK  +L EA +LFDEMPERD VSWN +LDGY ++G++NLA ELFEK+P R
Sbjct: 193  VSWNSMIAGLVKGEELSEARRLFDEMPERDAVSWNTILDGYAKAGEMNLAFELFEKIPHR 252

Query: 363  DSVSWCTLISGYSKSGDLKTARILFEKMPAKNLVAWTTIIAAYAAKGIVKEAIALYDQMQ 542
            + VSW T+I GYSK  D++ A++LF++MPAK LV WT II+ YA KG+ KEA  LYDQM+
Sbjct: 253  NIVSWSTMIWGYSKDADMEMAKLLFDRMPAKTLVPWTIIISGYAEKGMAKEAARLYDQME 312

Query: 543  VASMKPDEGTIIGILAACAASGVLGLGERIHYSLNKSGYRCSTRVLNTLIDMYAKCGSLN 722
             A +KPD+GT+I ILAACA SG+LGLG ++H S+NK  ++C+T V N L+DMYAKCGSL+
Sbjct: 313  EAGLKPDDGTLISILAACAESGLLGLGMKVHASINKYRFKCNTNVCNALVDMYAKCGSLD 372

Query: 723  GALTIFNGMEKKDITSWSTMIHASAIHGHGEMALHLFSKMKQEGFAPDRVTFIGILSACN 902
             A+++FNGM KKD+ SW+ M++  A+HG GE AL LFS+MK EGF PD+ TF+G+L AC 
Sbjct: 373  NAMSVFNGMTKKDLVSWNAMLYGLAMHGQGEKALGLFSRMKDEGFGPDKYTFVGVLCACT 432

Query: 903  HTGLVDEGIHLFYTMEKDYGVVPEIVHYGCMIDLLGRGGRLKEAFRLVQNMPFEPNNKIW 1082
            H G +D+G+  FY+ME+DYG++P++ HYGCMIDLLGR GRLKEA RLVQ+MP EPN  IW
Sbjct: 433  HAGFIDKGVQYFYSMERDYGILPQVEHYGCMIDLLGRSGRLKEALRLVQSMPVEPNAIIW 492

Query: 1083 GALIGACRKHYAVALAEEELKHLLQLDFTDSGSLSMLSSIYAISGDWNNFANARLRMRNI 1262
            G L+GACRKH AV LAEE L  L++L  +D G+ +MLS+I+A +GDWN  AN RL+M+  
Sbjct: 493  GTLLGACRKHNAVELAEEVLDCLIRLKGSDPGNYTMLSNIFAATGDWNKVANVRLQMKKT 552

Query: 1263 GCGKPSGASSVEVDNEFHEFTAMDQSHPKCDMVYEMIDGLTQHIKMRAAGHGAE 1424
               KPSGASSVEVDNE HEF+  DQ HPK + +Y+MI+ L + +K    GH A+
Sbjct: 553  RAQKPSGASSVEVDNEVHEFSVCDQLHPKSEQIYQMINTLGKDLK--PVGHAAK 604



 Score = 63.2 bits (152), Expect = 4e-07
 Identities = 51/187 (27%), Positives = 83/187 (44%), Gaps = 2/187 (1%)
 Frame = +3

Query: 384 LISGYSKSGDLKTARILFEKMPAKNLVAWTTIIAAYAAKGIVKEAIALYDQMQVASMKPD 563
           LIS  +    +  A  +F  +   N+  + ++I A     +  +A  ++  MQ   +  D
Sbjct: 64  LISSLALCRQMGLAIKVFNDIQDPNIHLYNSLIRACVQNSLNAQAFRVFLDMQEKGVFTD 123

Query: 564 EGTIIGILAACAASGVLGLGERIHYSLNKSGYRCSTRVLNTLIDMYAKCGSLNGALT--I 737
             T   +L AC       L + IH  + K GY     V N+LID Y+KCG++  +L   +
Sbjct: 124 NFTYPFLLKACNGKNWFHLVQMIHALIYKCGYFGDIFVPNSLIDSYSKCGAVGVSLAKKL 183

Query: 738 FNGMEKKDITSWSTMIHASAIHGHGEMALHLFSKMKQEGFAPDRVTFIGILSACNHTGLV 917
           F  M ++DI SW++MI           A  LF +M +     D V++  IL      G +
Sbjct: 184 FMSMGERDIVSWNSMIAGLVKGEELSEARRLFDEMPER----DAVSWNTILDGYAKAGEM 239

Query: 918 DEGIHLF 938
           +    LF
Sbjct: 240 NLAFELF 246


>gb|EOY03563.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
            [Theobroma cacao]
          Length = 672

 Score =  578 bits (1490), Expect = e-162
 Identities = 271/485 (55%), Positives = 364/485 (75%)
 Frame = +3

Query: 3    ACSDQSWFKVVTLINTHLIKYGLFDDVLILNSLVNSYLNCGLMGFCLAEKLFSIMVDRDA 182
            AC+D    K+V +I+T + K G   D+ + N+L++SY   G +G   A KLF +M DRD 
Sbjct: 192  ACTD---LKMVEMIHTQIEKNGFLSDIFVPNALIDSYSKFGELGIKAALKLFMVMEDRDV 248

Query: 183  VTYNCMLSGLVKVGKLDEALKLFDEMPERDTVSWNIVLDGYVRSGDLNLAIELFEKMPSR 362
            V++N M+ GL+KVG+L EA KLFDEMP+RD VSWN +LDGYV++G++  A ELF+K+P R
Sbjct: 249  VSWNSMIGGLLKVGELREARKLFDEMPQRDMVSWNTILDGYVKAGEMEKAFELFQKIPQR 308

Query: 363  DSVSWCTLISGYSKSGDLKTARILFEKMPAKNLVAWTTIIAAYAAKGIVKEAIALYDQMQ 542
            + VSW T++SGYSK+GD+  AR+LF++MP K LV WT II+ YA KG+ KEAI LYD+M+
Sbjct: 309  NVVSWSTMVSGYSKAGDMDMARVLFDRMPVKTLVPWTIIISGYAEKGLAKEAIELYDRME 368

Query: 543  VASMKPDEGTIIGILAACAASGVLGLGERIHYSLNKSGYRCSTRVLNTLIDMYAKCGSLN 722
               ++ D+GT+IGILAACA SG+L +G ++H S+ +  +RCS  V N L+DMYAKCGSL+
Sbjct: 369  QDGLELDDGTVIGILAACAESGLLAVGVKVHNSIERLRFRCSIAVCNALVDMYAKCGSLD 428

Query: 723  GALTIFNGMEKKDITSWSTMIHASAIHGHGEMALHLFSKMKQEGFAPDRVTFIGILSACN 902
             A ++FNGM K+D+ SW+ M+   A+HGHG+ AL +FS++K+EGF PDRVTF+GIL AC 
Sbjct: 429  KAWSVFNGMPKRDVVSWNAMLQGFAMHGHGKEALQVFSRLKKEGFQPDRVTFVGILCACT 488

Query: 903  HTGLVDEGIHLFYTMEKDYGVVPEIVHYGCMIDLLGRGGRLKEAFRLVQNMPFEPNNKIW 1082
            H G +DEG+  FY MEKDYG+VP+I HYGCM+DLLGRGGRL EAFRLVQ MPFEPN  IW
Sbjct: 489  HAGFIDEGVEYFYVMEKDYGIVPQIEHYGCMVDLLGRGGRLNEAFRLVQIMPFEPNAIIW 548

Query: 1083 GALIGACRKHYAVALAEEELKHLLQLDFTDSGSLSMLSSIYAISGDWNNFANARLRMRNI 1262
            G L+ ACR H AV LAE+ + HLL+LD +D G+ SML++I+A SGDW+N A+ RLRM++I
Sbjct: 549  GTLLAACRLHNAVKLAEKVIDHLLKLDPSDPGNYSMLANIFAASGDWDNVASLRLRMKSI 608

Query: 1263 GCGKPSGASSVEVDNEFHEFTAMDQSHPKCDMVYEMIDGLTQHIKMRAAGHGAEAQFNLP 1442
            G  KPSG+SS+E+DNE H+FT  D+SHPK D +Y+MI+ L + +K      G      LP
Sbjct: 609  GVQKPSGSSSIEIDNEVHDFTVFDKSHPKFDGIYQMIERLREDLKQVVHPEGT----TLP 664

Query: 1443 VPVDD 1457
            + V +
Sbjct: 665  IEVGE 669


>gb|EMJ18478.1| hypothetical protein PRUPE_ppa017633mg [Prunus persica]
          Length = 603

 Score =  577 bits (1488), Expect = e-162
 Identities = 267/465 (57%), Positives = 353/465 (75%)
 Frame = +3

Query: 3    ACSDQSWFKVVTLINTHLIKYGLFDDVLILNSLVNSYLNCGLMGFCLAEKLFSIMVDRDA 182
            ACS + WF VV +I+T + K+G   D+ + NSL+++Y  CGL+G   A+K+F +M +RD 
Sbjct: 124  ACSGRPWFPVVQMIHTSIEKFGFCLDIFVPNSLIDTYSKCGLLGVSEAKKMFMLMGERDI 183

Query: 183  VTYNCMLSGLVKVGKLDEALKLFDEMPERDTVSWNIVLDGYVRSGDLNLAIELFEKMPSR 362
            V++N M+ GL K G+L EA +LFDEMP++D VSWN +LDGY ++G +N A ELFE+MP R
Sbjct: 184  VSWNSMIGGLAKTGELGEARRLFDEMPDKDAVSWNTILDGYAKAGQMNEAFELFERMPQR 243

Query: 363  DSVSWCTLISGYSKSGDLKTARILFEKMPAKNLVAWTTIIAAYAAKGIVKEAIALYDQMQ 542
            + VSW TL+SGYSK+GD+  AR++F+KMP +NLV WT II+ YA KG+ KEAI LYDQM+
Sbjct: 244  NVVSWSTLVSGYSKAGDMGMARMMFDKMPFRNLVPWTIIISGYAEKGLAKEAIMLYDQME 303

Query: 543  VASMKPDEGTIIGILAACAASGVLGLGERIHYSLNKSGYRCSTRVLNTLIDMYAKCGSLN 722
             A +KPD G II ILAACA SG++GLG ++H S+ ++ ++CST V N L+DMYAKCG L+
Sbjct: 304  EAGLKPDNGAIISILAACAESGLIGLGRKVHASIERTRFKCSTPVSNALLDMYAKCGMLD 363

Query: 723  GALTIFNGMEKKDITSWSTMIHASAIHGHGEMALHLFSKMKQEGFAPDRVTFIGILSACN 902
             A  +F+G+ KKD+ SW+ M+   A+HGHG+ AL LFS+M + GF PD+VTFIG+L AC 
Sbjct: 364  EASRVFHGIAKKDLVSWNAMLQGLAMHGHGDKALQLFSRMVKAGFLPDKVTFIGVLCACT 423

Query: 903  HTGLVDEGIHLFYTMEKDYGVVPEIVHYGCMIDLLGRGGRLKEAFRLVQNMPFEPNNKIW 1082
            H G V+EG+  F+TME++YG+VPEI HYGCMIDLLGRGG L+EAFRLV +MP EPN  IW
Sbjct: 424  HAGFVEEGLQAFHTMEREYGIVPEIEHYGCMIDLLGRGGCLREAFRLVHSMPMEPNVVIW 483

Query: 1083 GALIGACRKHYAVALAEEELKHLLQLDFTDSGSLSMLSSIYAISGDWNNFANARLRMRNI 1262
            G L+GACR H    LA+E L HL++LD +D+G+ SMLS+IYA +GDW N AN RL+MRN 
Sbjct: 484  GTLLGACRMHNDPELAQEVLDHLVKLDPSDAGNFSMLSNIYAAAGDWANVANVRLQMRNT 543

Query: 1263 GCGKPSGASSVEVDNEFHEFTAMDQSHPKCDMVYEMIDGLTQHIK 1397
            G  KPSGASS+EV +E HEFT  D+ HPK   +Y+MI+ L Q  K
Sbjct: 544  GVQKPSGASSIEVGDEVHEFTVFDKLHPKSGEIYQMIERLRQDFK 588



 Score = 85.9 bits (211), Expect = 6e-14
 Identities = 91/361 (25%), Positives = 156/361 (43%), Gaps = 13/361 (3%)
 Frame = +3

Query: 384  LISGYSKSGDLKTARILFEKMPAKNLVAWTTIIAAYAAKGIVKEAIALYDQMQVASMKPD 563
            LI+ +S    +  A  +F ++   N+  + T+I A+       +A A +  MQ+  + PD
Sbjct: 55   LIAAFSLCRQMALAVNVFNQVQDPNVHLYNTLIRAHIQNSQTTQAFATFFDMQLNGVYPD 114

Query: 564  EGTIIGILAACAASGVLGLGERIHYSLNKSGYRCSTRVLNTLIDMYAKCGSL--NGALTI 737
              T   +L AC+      + + IH S+ K G+     V N+LID Y+KCG L  + A  +
Sbjct: 115  NFTYPFLLKACSGRPWFPVVQMIHTSIEKFGFCLDIFVPNSLIDTYSKCGLLGVSEAKKM 174

Query: 738  FNGMEKKDITSWSTMIHASAIHGHGEMALHLFSKMKQEGFAPDRVTFIGILSACNHTGLV 917
            F  M ++DI SW++MI   A  G    A  LF +M  +    D V++  IL      G +
Sbjct: 175  FMLMGERDIVSWNSMIGGLAKTGELGEARRLFDEMPDK----DAVSWNTILDGYAKAGQM 230

Query: 918  DEGIHLFYTMEKDYGVVPEIVHYGCMIDLLGRGGRLKEAFRLVQNMPFEPNNKIWGALIG 1097
            +E   LF  M +       +V +  ++    + G +  A  +   MPF  N   W  +I 
Sbjct: 231  NEAFELFERMPQ-----RNVVSWSTLVSGYSKAGDMGMARMMFDKMPFR-NLVPWTIIIS 284

Query: 1098 ACRKHYAVALAEEELKHLLQLDFT----DSGSLSMLSSIYAISG--DWNNFANARLRMRN 1259
                +    LA+E +    Q++      D+G++  + +  A SG        +A +    
Sbjct: 285  G---YAEKGLAKEAIMLYDQMEEAGLKPDNGAIISILAACAESGLIGLGRKVHASIERTR 341

Query: 1260 IGCGKPSGASSVEVDNE---FHEFTAMDQSHPKCDMV--YEMIDGLTQHIKMRAAGHGAE 1424
              C  P   + +++  +     E + +     K D+V    M+ GL  H      GHG +
Sbjct: 342  FKCSTPVSNALLDMYAKCGMLDEASRVFHGIAKKDLVSWNAMLQGLAMH------GHGDK 395

Query: 1425 A 1427
            A
Sbjct: 396  A 396


>ref|XP_002532904.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223527338|gb|EEF29484.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 604

 Score =  568 bits (1463), Expect = e-159
 Identities = 265/468 (56%), Positives = 352/468 (75%)
 Frame = +3

Query: 3    ACSDQSWFKVVTLINTHLIKYGLFDDVLILNSLVNSYLNCGLMGFCLAEKLFSIMVDRDA 182
            AC+ + W   V +I+ H+ KYG F D+ + NSL++SY  CGL+G   A KLF  M ++D 
Sbjct: 130  ACNGKGWLPTVQMIHCHVEKYGFFGDLFVPNSLIDSYSKCGLLGVNYAMKLFMEMGEKDL 189

Query: 183  VTYNCMLSGLVKVGKLDEALKLFDEMPERDTVSWNIVLDGYVRSGDLNLAIELFEKMPSR 362
            V++N M+ GLVK G L  A KLFDEM ERD VSWN +LDGYV++G+++ A  LFEKMP R
Sbjct: 190  VSWNSMIGGLVKAGDLGRARKLFDEMAERDAVSWNTILDGYVKAGEMSQAFNLFEKMPER 249

Query: 363  DSVSWCTLISGYSKSGDLKTARILFEKMPAKNLVAWTTIIAAYAAKGIVKEAIALYDQMQ 542
            + VSW T++SGY K+GD++ AR+LF+KMP KNLV WT II+ +A KG+ KEA  LY+QM+
Sbjct: 250  NVVSWSTMVSGYCKTGDMEMARMLFDKMPFKNLVTWTIIISGFAEKGLAKEATTLYNQME 309

Query: 543  VASMKPDEGTIIGILAACAASGVLGLGERIHYSLNKSGYRCSTRVLNTLIDMYAKCGSLN 722
             A +KPD+GT+I ILAACA SG+L LG+++H S+ K   +CS  V N L+DMYAKCG ++
Sbjct: 310  AAGLKPDDGTLISILAACAESGLLVLGKKVHASIKKIRIKCSVNVSNALVDMYAKCGRVD 369

Query: 723  GALTIFNGMEKKDITSWSTMIHASAIHGHGEMALHLFSKMKQEGFAPDRVTFIGILSACN 902
             AL+IFN M  +D+ SW+ M+   A+HGHGE A+ LFSKM+QEGF PD+VT I IL AC 
Sbjct: 370  KALSIFNEMSMRDLVSWNCMLQGLAMHGHGEKAIQLFSKMQQEGFKPDKVTLIAILCACT 429

Query: 903  HTGLVDEGIHLFYTMEKDYGVVPEIVHYGCMIDLLGRGGRLKEAFRLVQNMPFEPNNKIW 1082
            H G VD+G+  F +ME+D+G+VP I HYGCMIDLLGRGGRL+EAFRLVQ+MP EPN+ IW
Sbjct: 430  HAGFVDQGLSYFNSMERDHGIVPHIEHYGCMIDLLGRGGRLEEAFRLVQSMPMEPNDVIW 489

Query: 1083 GALIGACRKHYAVALAEEELKHLLQLDFTDSGSLSMLSSIYAISGDWNNFANARLRMRNI 1262
            G L+GACR H AV LAE+ L  L+ L+ +D G+ SMLS+I+A +GDWN+ AN RL+M++ 
Sbjct: 490  GTLLGACRVHNAVPLAEKVLDRLITLEQSDPGNYSMLSNIFAAAGDWNSVANMRLQMKST 549

Query: 1263 GCGKPSGASSVEVDNEFHEFTAMDQSHPKCDMVYEMIDGLTQHIKMRA 1406
            G  KPSGASS+E+D+E HEFT  D+SHP+ D +Y+++  L Q +K  A
Sbjct: 550  GVQKPSGASSIELDDEVHEFTVFDKSHPETDKIYQILVKLGQDLKQVA 597



 Score = 84.7 bits (208), Expect = 1e-13
 Identities = 99/372 (26%), Positives = 154/372 (41%), Gaps = 24/372 (6%)
 Frame = +3

Query: 384  LISGYSKSGDLKTARILFEKMPAKNLVAWTTIIAAYAAKGIVKEAIALYDQMQVASMKPD 563
            LIS +S    +  A  +F ++   N+  + T+I A+       +A A +  MQ   +  D
Sbjct: 61   LISAFSLCHQMNLAVNVFNQIQDPNVHLYNTLIRAHVQNSQSLKAFATFFDMQKNGLFAD 120

Query: 564  EGTIIGILAACAASGVLGLGERIHYSLNKSGYRCSTRVLNTLIDMYAKCGSL--NGALTI 737
              T   +L AC   G L   + IH  + K G+     V N+LID Y+KCG L  N A+ +
Sbjct: 121  NFTYPFLLKACNGKGWLPTVQMIHCHVEKYGFFGDLFVPNSLIDSYSKCGLLGVNYAMKL 180

Query: 738  FNGMEKKDITSWSTMIHASAIHGHGEMALHLFSKMKQEGFAPDRVTFIGILSACNHTGLV 917
            F  M +KD+ SW++MI      G    A  LF +M +     D V++  IL      G +
Sbjct: 181  FMEMGEKDLVSWNSMIGGLVKAGDLGRARKLFDEMAER----DAVSWNTILDGYVKAGEM 236

Query: 918  DEGIHLFYTMEKDYGVVPEIVHYGCMIDLLGRGGRLKEAFRLVQNMPFEPNNKIWGALIG 1097
             +  +LF  M +       +V +  M+    + G ++ A  L   MPF+ N   W  +I 
Sbjct: 237  SQAFNLFEKMPE-----RNVVSWSTMVSGYCKTGDMEMARMLFDKMPFK-NLVTWTIIIS 290

Query: 1098 ACRKHYAVALAEEELKHLLQLDFT----DSGSLSMLSSIYAISG---------------- 1217
               +     LA+E      Q++      D G+L  + +  A SG                
Sbjct: 291  GFAEK---GLAKEATTLYNQMEAAGLKPDDGTLISILAACAESGLLVLGKKVHASIKKIR 347

Query: 1218 --DWNNFANARLRMRNIGCGKPSGASSVEVDNEFHEFTAMDQSHPKCDMVYEMIDGLTQH 1391
                 N +NA + M    CG+   A S+     F+E +  D     C     M+ GL  H
Sbjct: 348  IKCSVNVSNALVDM-YAKCGRVDKALSI-----FNEMSMRDLVSWNC-----MLQGLAMH 396

Query: 1392 IKMRAAGHGAEA 1427
                  GHG +A
Sbjct: 397  ------GHGEKA 402


>gb|EXB38041.1| hypothetical protein L484_020960 [Morus notabilis]
          Length = 599

 Score =  567 bits (1461), Expect = e-159
 Identities = 265/465 (56%), Positives = 350/465 (75%)
 Frame = +3

Query: 3    ACSDQSWFKVVTLINTHLIKYGLFDDVLILNSLVNSYLNCGLMGFCLAEKLFSIMVDRDA 182
            ACS ++W  VV +++TH+ K G   D+ + N+L++SY  CG +G   A+KLF  M  RD 
Sbjct: 126  ACSGKAWLSVVQMVHTHIEKCGFCSDIFVPNALIDSYSKCGPVGVFAAKKLFLAMGVRDV 185

Query: 183  VTYNCMLSGLVKVGKLDEALKLFDEMPERDTVSWNIVLDGYVRSGDLNLAIELFEKMPSR 362
            V++N M+ GLVKVG+L EA +LFDEMPERD V+WN +LDGYV++G ++ A E F++MP R
Sbjct: 186  VSWNSMVGGLVKVGELGEARQLFDEMPERDLVTWNTMLDGYVKAGQMSEAFEFFQRMPER 245

Query: 363  DSVSWCTLISGYSKSGDLKTARILFEKMPAKNLVAWTTIIAAYAAKGIVKEAIALYDQMQ 542
            + VSW T++SGYS++GD+  ARILF+KMP KNLV WT I++ YAAKGI  EA +LYDQM+
Sbjct: 246  NVVSWSTIVSGYSRAGDMDMARILFDKMPVKNLVTWTIIVSGYAAKGIANEANSLYDQME 305

Query: 543  VASMKPDEGTIIGILAACAASGVLGLGERIHYSLNKSGYRCSTRVLNTLIDMYAKCGSLN 722
             A +K D+GTII +LAACA SG+LGLGE++H S+++  YRC T V N L+DMYAKCGSL+
Sbjct: 306  DAGLKFDDGTIISVLAACAESGLLGLGEKVHASMDRIRYRCCTPVSNALVDMYAKCGSLD 365

Query: 723  GALTIFNGMEKKDITSWSTMIHASAIHGHGEMALHLFSKMKQEGFAPDRVTFIGILSACN 902
             A  +FNG+  KD+ SW+ MIH  AIHGHGE AL LF +MK+E F+PD VTF+GIL  C 
Sbjct: 366  KAYKVFNGIGNKDLVSWNAMIHGLAIHGHGEKALWLFGRMKKESFSPDAVTFVGILCGCA 425

Query: 903  HTGLVDEGIHLFYTMEKDYGVVPEIVHYGCMIDLLGRGGRLKEAFRLVQNMPFEPNNKIW 1082
            H G V EG++ F++ME+DYGVVP++ HYGC++DLLGRGGRL+EAFRLV +MP EPN  IW
Sbjct: 426  HAGFVKEGLYYFHSMERDYGVVPQVEHYGCVVDLLGRGGRLEEAFRLVNSMPVEPNPVIW 485

Query: 1083 GALIGACRKHYAVALAEEELKHLLQLDFTDSGSLSMLSSIYAISGDWNNFANARLRMRNI 1262
              L+GACR H AV LA E L HL +L+ +D G+ SMLS+IYA +GDW + A  R+RMR+ 
Sbjct: 486  STLLGACRVHNAVDLAAEVLDHLAKLESSDPGNFSMLSNIYAAAGDWESVATMRVRMRST 545

Query: 1263 GCGKPSGASSVEVDNEFHEFTAMDQSHPKCDMVYEMIDGLTQHIK 1397
            G  K SGASS+EV++E HEF    +SHP+ D +Y+ I  L Q +K
Sbjct: 546  GIQKASGASSIEVNDEVHEFKVFHKSHPQSDKIYQTIGKLNQDLK 590



 Score = 81.3 bits (199), Expect = 2e-12
 Identities = 70/280 (25%), Positives = 117/280 (41%), Gaps = 8/280 (2%)
 Frame = +3

Query: 384  LISGYSKSGDLKTARILFEKMPAKNLVAWTTIIAAYAAKGIVKEAIALYDQMQVASMKPD 563
            LI+ +S    +  A  +F+++P  N+  +  +I A+       +A A +  MQ   + PD
Sbjct: 57   LIAAFSLCRQIALAVNVFDQIPEPNVHVFNAMIRAHTQNSQGPQAFAAFFNMQSNGVSPD 116

Query: 564  EGTIIGILAACAASGVLGLGERIHYSLNKSGYRCSTRVLNTLIDMYAKCGSLN--GALTI 737
              T   +L AC+    L + + +H  + K G+     V N LID Y+KCG +    A  +
Sbjct: 117  NYTYSFLLKACSGKAWLSVVQMVHTHIEKCGFCSDIFVPNALIDSYSKCGPVGVFAAKKL 176

Query: 738  FNGMEKKDITSWSTMIHASAIHGHGEMALHLFSKMKQEGFAPDRVTFIGILSACNHTGLV 917
            F  M  +D+ SW++M+      G    A  LF +M +     D VT+  +L      G +
Sbjct: 177  FLAMGVRDVVSWNSMVGGLVKVGELGEARQLFDEMPER----DLVTWNTMLDGYVKAGQM 232

Query: 918  DEGIHLFYTMEKDYGVVPEIVHYGCMIDLLGRGGRLKEAFRLVQNMPFEPNNKIWGALIG 1097
             E    F  M +       +V +  ++    R G +  A  L   MP + N   W  ++ 
Sbjct: 233  SEAFEFFQRMPE-----RNVVSWSTIVSGYSRAGDMDMARILFDKMPVK-NLVTWTIIVS 286

Query: 1098 ACRKHYAVALAEEELKHLLQ------LDFTDSGSLSMLSS 1199
                 YA      E   L        L F D   +S+L++
Sbjct: 287  G----YAAKGIANEANSLYDQMEDAGLKFDDGTIISVLAA 322


>ref|XP_006338411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230-like
            [Solanum tuberosum]
          Length = 602

 Score =  561 bits (1445), Expect = e-157
 Identities = 261/465 (56%), Positives = 354/465 (76%)
 Frame = +3

Query: 6    CSDQSWFKVVTLINTHLIKYGLFDDVLILNSLVNSYLNCGLMGFCLAEKLFSIMVDRDAV 185
            CS + W  VV++I+TH++K+G  DD+ + NSL+++Y  CGL+G  +A +LF  M +RD V
Sbjct: 127  CSGKCWLSVVSMIHTHVVKWGFEDDIYVPNSLIDAYSKCGLVGVRIAGQLFWGMKERDVV 186

Query: 186  TYNCMLSGLVKVGKLDEALKLFDEMPERDTVSWNIVLDGYVRSGDLNLAIELFEKMPSRD 365
            ++N M+S L+KVG L EA KLFDEMP+RD VSWN +LDGY ++  +++A ELF+ MP RD
Sbjct: 187  SWNSMISALLKVGDLSEARKLFDEMPQRDRVSWNTMLDGYTKAEQMSVAFELFKTMPQRD 246

Query: 366  SVSWCTLISGYSKSGDLKTARILFEKMPAKNLVAWTTIIAAYAAKGIVKEAIALYDQMQV 545
             VSW T++SGY K+GDL+ AR+LF+KMP+KNLV+WT +I+ YA KG+V EAI L+ QM+ 
Sbjct: 247  VVSWSTMVSGYCKAGDLEMARMLFDKMPSKNLVSWTIMISGYAEKGLVNEAIQLFMQMEE 306

Query: 546  ASMKPDEGTIIGILAACAASGVLGLGERIHYSLNKSGYRCSTRVLNTLIDMYAKCGSLNG 725
              ++ D    + ILAACA SG+L LG+++H S+ +S Y+C+T V N LIDMYAKCG L+ 
Sbjct: 307  TGLRLDVAAFVSILAACAESGMLSLGKKVHDSVERSTYKCNTLVCNALIDMYAKCGCLHK 366

Query: 726  ALTIFNGMEKKDITSWSTMIHASAIHGHGEMALHLFSKMKQEGFAPDRVTFIGILSACNH 905
            A  +FNG+EK+D+ SW+ MIH  A+HG G+ AL LF +MKQEGF PD+VT +GIL ACNH
Sbjct: 367  AYKVFNGLEKRDLVSWNAMIHGLAMHGRGKKALELFFRMKQEGFVPDKVTLVGILCACNH 426

Query: 906  TGLVDEGIHLFYTMEKDYGVVPEIVHYGCMIDLLGRGGRLKEAFRLVQNMPFEPNNKIWG 1085
            TGLVDEGI  FY+MEKDYGV PE+ HYGC+IDLLGRGG ++EAF L + MP EPN KIWG
Sbjct: 427  TGLVDEGILFFYSMEKDYGVKPEVEHYGCLIDLLGRGGYVREAFELARKMPLEPNVKIWG 486

Query: 1086 ALIGACRKHYAVALAEEELKHLLQLDFTDSGSLSMLSSIYAISGDWNNFANARLRMRNIG 1265
            +L+GACR H  V LA++    L++L+  ++G LS LS+IYA +GDW+N AN RL M+NIG
Sbjct: 487  SLLGACRMHKDVELADDVRSLLVKLEPKNAGKLSALSNIYASAGDWDNVANIRLMMKNIG 546

Query: 1266 CGKPSGASSVEVDNEFHEFTAMDQSHPKCDMVYEMIDGLTQHIKM 1400
                SGAS + +++E+ EFT MD+SH K D +Y+M+D L QH+K+
Sbjct: 547  RPNQSGASLLLLNDEYREFTVMDKSHVKSDKIYQMVDRLGQHLKL 591



 Score = 80.5 bits (197), Expect = 3e-12
 Identities = 67/264 (25%), Positives = 118/264 (44%), Gaps = 2/264 (0%)
 Frame = +3

Query: 384  LISGYSKSGDLKTARILFEKMPAKNLVAWTTIIAAYAAKGIVKEAIALYDQMQVASMKPD 563
            LI+ +S    + +   +F+++   N+  +  +I A+       +A   +  MQ + + PD
Sbjct: 57   LIAAFSNCRQMGSVLKVFDQVRDPNVHLYNALIRAHIYNSQPSQAFDTFFDMQSSGIFPD 116

Query: 564  EGTIIGILAACAASGVLGLGERIHYSLNKSGYRCSTRVLNTLIDMYAKCGSLNGALT--I 737
              T   +L  C+    L +   IH  + K G+     V N+LID Y+KCG +   +   +
Sbjct: 117  NFTFSFLLKGCSGKCWLSVVSMIHTHVVKWGFEDDIYVPNSLIDAYSKCGLVGVRIAGQL 176

Query: 738  FNGMEKKDITSWSTMIHASAIHGHGEMALHLFSKMKQEGFAPDRVTFIGILSACNHTGLV 917
            F GM+++D+ SW++MI A    G    A  LF +M Q     DRV++  +L        +
Sbjct: 177  FWGMKERDVVSWNSMISALLKVGDLSEARKLFDEMPQR----DRVSWNTMLDGYTKAEQM 232

Query: 918  DEGIHLFYTMEKDYGVVPEIVHYGCMIDLLGRGGRLKEAFRLVQNMPFEPNNKIWGALIG 1097
                 LF TM +      ++V +  M+    + G L+ A  L   MP   N   W  +I 
Sbjct: 233  SVAFELFKTMPQ-----RDVVSWSTMVSGYCKAGDLEMARMLFDKMP-SKNLVSWTIMIS 286

Query: 1098 ACRKHYAVALAEEELKHLLQLDFT 1169
                +    L  E ++  +Q++ T
Sbjct: 287  G---YAEKGLVNEAIQLFMQMEET 307


>ref|XP_004134328.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230-like
            [Cucumis sativus]
          Length = 601

 Score =  559 bits (1440), Expect = e-156
 Identities = 257/465 (55%), Positives = 349/465 (75%), Gaps = 1/465 (0%)
 Frame = +3

Query: 6    CSDQSWFKVVTLINTHLIKYGLFDDVLILNSLVNSYLNCGLMGFCLAEKLF-SIMVDRDA 182
            C+   W  V+  ++  + K+G   DV + NSL++SY  CG  G   A+KLF S+   RD 
Sbjct: 128  CTGNVWLPVIESVHAQIEKFGFMSDVFVPNSLIDSYSKCGSCGISAAKKLFVSMGARRDV 187

Query: 183  VTYNCMLSGLVKVGKLDEALKLFDEMPERDTVSWNIVLDGYVRSGDLNLAIELFEKMPSR 362
            V++N M+SGL K G  +EA K+FDEMPE+D +SWN +LDGYV+ G ++ A +LF++MP R
Sbjct: 188  VSWNSMISGLAKGGLYEEARKVFDEMPEKDGISWNTMLDGYVKVGKMDDAFKLFDEMPER 247

Query: 363  DSVSWCTLISGYSKSGDLKTARILFEKMPAKNLVAWTTIIAAYAAKGIVKEAIALYDQMQ 542
            + VSW T++ GY K+GD++ AR+LF+KMP KNLV+WT I++ +A KG+ +EAI+L+DQM+
Sbjct: 248  NVVSWSTMVLGYCKAGDMEMARMLFDKMPVKNLVSWTIIVSGFAEKGLAREAISLFDQME 307

Query: 543  VASMKPDEGTIIGILAACAASGVLGLGERIHYSLNKSGYRCSTRVLNTLIDMYAKCGSLN 722
             A +K D GT++ ILAACA SG+LGLGE+IH S+  + ++C+T + N L+DMYAKCG LN
Sbjct: 308  KACLKLDNGTVMSILAACAESGLLGLGEKIHASIKNNNFKCTTEISNALVDMYAKCGRLN 367

Query: 723  GALTIFNGMEKKDITSWSTMIHASAIHGHGEMALHLFSKMKQEGFAPDRVTFIGILSACN 902
             A  +FN ++ KD+ SW+ M+   A+HGHG  AL LF +MK+EGF+P++VT IG+L AC 
Sbjct: 368  IAYDVFNDIKNKDVVSWNAMLQGLAMHGHGVKALELFKRMKEEGFSPNKVTMIGVLCACT 427

Query: 903  HTGLVDEGIHLFYTMEKDYGVVPEIVHYGCMIDLLGRGGRLKEAFRLVQNMPFEPNNKIW 1082
            H GL+D+GI  F TME+DY +VPE+ HYGCM+DLLGR GRL+EA RL++NMP  PN  IW
Sbjct: 428  HAGLIDDGIRYFSTMERDYTLVPEVEHYGCMVDLLGRKGRLEEAIRLIRNMPMAPNAIIW 487

Query: 1083 GALIGACRKHYAVALAEEELKHLLQLDFTDSGSLSMLSSIYAISGDWNNFANARLRMRNI 1262
            G L+GACR H AV LA E L HL++L+ TDSG+ SMLS+IYA +GDWN  AN RLRMR+I
Sbjct: 488  GTLLGACRMHNAVELAREVLDHLVELEPTDSGNFSMLSNIYAAAGDWNCVANTRLRMRSI 547

Query: 1263 GCGKPSGASSVEVDNEFHEFTAMDQSHPKCDMVYEMIDGLTQHIK 1397
            G  KPSGASS+EV+NE HEFT  D+SHPK D +Y++I+GL   +K
Sbjct: 548  GTKKPSGASSIEVNNEVHEFTVFDRSHPKSDNIYQVINGLRHELK 592



 Score = 79.0 bits (193), Expect = 8e-12
 Identities = 94/371 (25%), Positives = 160/371 (43%), Gaps = 23/371 (6%)
 Frame = +3

Query: 384  LISGYSKSGDLKTARILFEKMPAKNLVAWTTIIAAYAAKGIVKEAIALYDQMQVASMKPD 563
            LIS +S    +  A   F ++   N+  + T+I A++      +A A +  MQ      D
Sbjct: 58   LISAFSLCRQMLLATNAFNQVQYPNVHLYNTMIRAHSHNSQPSQAFATFFAMQRDGHYAD 117

Query: 564  EGTIIGILAACAASGVLGLGERIHYSLNKSGYRCSTRVLNTLIDMYAKCGS--LNGALTI 737
              T   +L  C  +  L + E +H  + K G+     V N+LID Y+KCGS  ++ A  +
Sbjct: 118  NFTFPFLLKVCTGNVWLPVIESVHAQIEKFGFMSDVFVPNSLIDSYSKCGSCGISAAKKL 177

Query: 738  FNGM-EKKDITSWSTMIHASAIHGHGEMALHLFSKMKQEGFAPDRVTFIGILSACNHTGL 914
            F  M  ++D+ SW++MI   A  G  E A  +F +M ++    D +++  +L      G 
Sbjct: 178  FVSMGARRDVVSWNSMISGLAKGGLYEEARKVFDEMPEK----DGISWNTMLDGYVKVGK 233

Query: 915  VDEGIHLFYTMEKDYGVVPEIVHYGCMIDLLGRGGRLKEAFRLVQNMPFEPNNKIWGALI 1094
            +D+   LF  M +       +V +  M+    + G ++ A  L   MP + N   W  ++
Sbjct: 234  MDDAFKLFDEMPE-----RNVVSWSTMVLGYCKAGDMEMARMLFDKMPVK-NLVSWTIIV 287

Query: 1095 GACRK----HYAVALAEEELKHLLQLD----------FTDSGSLSMLSSIYAISGDWNNF 1232
                +      A++L ++  K  L+LD            +SG L +   I+A S   NNF
Sbjct: 288  SGFAEKGLAREAISLFDQMEKACLKLDNGTVMSILAACAESGLLGLGEKIHA-SIKNNNF 346

Query: 1233 ------ANARLRMRNIGCGKPSGASSVEVDNEFHEFTAMDQSHPKCDMVYEMIDGLTQHI 1394
                  +NA + M    CG+ + A  V  D +  +  + +           M+ GL  H 
Sbjct: 347  KCTTEISNALVDM-YAKCGRLNIAYDVFNDIKNKDVVSWN----------AMLQGLAMH- 394

Query: 1395 KMRAAGHGAEA 1427
                 GHG +A
Sbjct: 395  -----GHGVKA 400


>ref|XP_004232191.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230-like
            [Solanum lycopersicum]
          Length = 602

 Score =  557 bits (1436), Expect = e-156
 Identities = 259/465 (55%), Positives = 353/465 (75%)
 Frame = +3

Query: 6    CSDQSWFKVVTLINTHLIKYGLFDDVLILNSLVNSYLNCGLMGFCLAEKLFSIMVDRDAV 185
            CS + W  VV++I+TH++K+G  DD+ + NSL+++Y  CGL+G  +A +LF  M +RD V
Sbjct: 127  CSGKCWLSVVSMIHTHVVKWGFEDDIYVPNSLIDAYSKCGLVGVRIAGQLFWGMKERDVV 186

Query: 186  TYNCMLSGLVKVGKLDEALKLFDEMPERDTVSWNIVLDGYVRSGDLNLAIELFEKMPSRD 365
            ++N M+S L+KVG L EA KLFDEMP+RD VSWN +LDGY ++  +++A ELF+ MP RD
Sbjct: 187  SWNSMISALLKVGDLSEARKLFDEMPQRDRVSWNTMLDGYTKAEQMSVAFELFKTMPQRD 246

Query: 366  SVSWCTLISGYSKSGDLKTARILFEKMPAKNLVAWTTIIAAYAAKGIVKEAIALYDQMQV 545
             VSW T++SGY K+GDL+ AR+LF+KMP+KNLV+WT +I+ YA KG++ EAI L+ QM+ 
Sbjct: 247  VVSWSTMVSGYCKAGDLEMARMLFDKMPSKNLVSWTIMISGYAEKGLINEAILLFMQMEE 306

Query: 546  ASMKPDEGTIIGILAACAASGVLGLGERIHYSLNKSGYRCSTRVLNTLIDMYAKCGSLNG 725
              ++ D    + ILAACA SG+L LG+++H S+ +S Y+C+T V N LIDMYAKCG L+ 
Sbjct: 307  TGLRLDVAAFVSILAACAESGMLSLGKKVHDSVERSMYKCNTLVCNALIDMYAKCGCLHK 366

Query: 726  ALTIFNGMEKKDITSWSTMIHASAIHGHGEMALHLFSKMKQEGFAPDRVTFIGILSACNH 905
            A  +FNG++K+D+ SW+ MIH  A+HG G+ AL LF +MKQEGF PD+VT +GIL ACNH
Sbjct: 367  AYKVFNGLKKRDLVSWNAMIHGLAMHGRGKKALELFIRMKQEGFVPDKVTLVGILCACNH 426

Query: 906  TGLVDEGIHLFYTMEKDYGVVPEIVHYGCMIDLLGRGGRLKEAFRLVQNMPFEPNNKIWG 1085
            TGLVDEGI  FY+MEKDYGV PE+ HYGC+IDLLGRGG ++EAF L + MP EPN KIWG
Sbjct: 427  TGLVDEGILFFYSMEKDYGVKPEVEHYGCLIDLLGRGGYVREAFELARKMPLEPNIKIWG 486

Query: 1086 ALIGACRKHYAVALAEEELKHLLQLDFTDSGSLSMLSSIYAISGDWNNFANARLRMRNIG 1265
            +L+GACR H  V LA++    L++L+  ++G LS LS+IYA +GDW+N AN RL M+NIG
Sbjct: 487  SLLGACRMHKDVELADDVRSLLVKLEPKNAGKLSALSNIYASAGDWDNVANIRLMMKNIG 546

Query: 1266 CGKPSGASSVEVDNEFHEFTAMDQSHPKCDMVYEMIDGLTQHIKM 1400
                SG S + +++E+ EFT MD+SH K D +Y+MID L QH+K+
Sbjct: 547  RPNQSGGSLLLLNDEYREFTVMDKSHVKSDKIYQMIDRLGQHLKL 591



 Score = 78.2 bits (191), Expect = 1e-11
 Identities = 60/227 (26%), Positives = 104/227 (45%), Gaps = 2/227 (0%)
 Frame = +3

Query: 384  LISGYSKSGDLKTARILFEKMPAKNLVAWTTIIAAYAAKGIVKEAIALYDQMQVASMKPD 563
            LI+ +S    + +   +F+++   N+  +  +I A+       +A   +  MQ + + PD
Sbjct: 57   LIAAFSNCRQMGSVLKIFDQVRDPNVHLYNALIRAHIYNFQPSQAFDTFFDMQSSGIFPD 116

Query: 564  EGTIIGILAACAASGVLGLGERIHYSLNKSGYRCSTRVLNTLIDMYAKCGSLNGALT--I 737
              T   +L  C+    L +   IH  + K G+     V N+LID Y+KCG +   +   +
Sbjct: 117  NFTFSFLLKGCSGKCWLSVVSMIHTHVVKWGFEDDIYVPNSLIDAYSKCGLVGVRIAGQL 176

Query: 738  FNGMEKKDITSWSTMIHASAIHGHGEMALHLFSKMKQEGFAPDRVTFIGILSACNHTGLV 917
            F GM+++D+ SW++MI A    G    A  LF +M Q     DRV++  +L        +
Sbjct: 177  FWGMKERDVVSWNSMISALLKVGDLSEARKLFDEMPQR----DRVSWNTMLDGYTKAEQM 232

Query: 918  DEGIHLFYTMEKDYGVVPEIVHYGCMIDLLGRGGRLKEAFRLVQNMP 1058
                 LF TM +      ++V +  M+    + G L+ A  L   MP
Sbjct: 233  SVAFELFKTMPQ-----RDVVSWSTMVSGYCKAGDLEMARMLFDKMP 274


>ref|XP_004306116.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230-like
            [Fragaria vesca subsp. vesca]
          Length = 605

 Score =  553 bits (1426), Expect = e-155
 Identities = 255/465 (54%), Positives = 349/465 (75%)
 Frame = +3

Query: 3    ACSDQSWFKVVTLINTHLIKYGLFDDVLILNSLVNSYLNCGLMGFCLAEKLFSIMVDRDA 182
            ACS + +  VV +I+  + K+G   D+ + NSL+++Y  CGL G   A KLF +M ++D 
Sbjct: 126  ACSGKGYLHVVLMIHAQIEKFGFCGDIFVPNSLIDTYSKCGLEGVGAARKLFRVMEEKDI 185

Query: 183  VTYNCMLSGLVKVGKLDEALKLFDEMPERDTVSWNIVLDGYVRSGDLNLAIELFEKMPSR 362
            V++N M+ GL + G+L +A +LFDEMPERD VSWN +LDGY ++G ++ A ELFE+MP R
Sbjct: 186  VSWNSMIGGLARAGELSDARQLFDEMPERDAVSWNSILDGYAKAGKMDEAFELFERMPQR 245

Query: 363  DSVSWCTLISGYSKSGDLKTARILFEKMPAKNLVAWTTIIAAYAAKGIVKEAIALYDQMQ 542
            + VSW TL+SGYSK GD+  AR++F++MP KNLV WT II+ YA KG+ KEAI LYDQM+
Sbjct: 246  NVVSWSTLVSGYSKVGDMGMARMMFDRMPFKNLVPWTIIISGYAQKGLAKEAIMLYDQME 305

Query: 543  VASMKPDEGTIIGILAACAASGVLGLGERIHYSLNKSGYRCSTRVLNTLIDMYAKCGSLN 722
               +K D G II ILAACA SG++ LG+++H S+ ++ ++CST VLN L+DMYAKCG L 
Sbjct: 306  GDGLKLDNGAIISILAACAESGLIALGKKVHESIERNRFKCSTPVLNALLDMYAKCGGLE 365

Query: 723  GALTIFNGMEKKDITSWSTMIHASAIHGHGEMALHLFSKMKQEGFAPDRVTFIGILSACN 902
             A  +F+G+ +KD+ SW++M+   A+HGHGE AL LFS+M++ GF PD+VTFIG+L AC 
Sbjct: 366  EAYRVFDGIARKDLVSWNSMLQGLAMHGHGEKALQLFSRMEKAGFRPDKVTFIGVLCACT 425

Query: 903  HTGLVDEGIHLFYTMEKDYGVVPEIVHYGCMIDLLGRGGRLKEAFRLVQNMPFEPNNKIW 1082
            H+G V+EG+ +F+ MEK+YG+VPE+ HYGCMIDLLGRGGRL+EAFRLV +MP EPN  IW
Sbjct: 426  HSGFVEEGLDVFHRMEKEYGIVPEVEHYGCMIDLLGRGGRLREAFRLVYSMPMEPNAVIW 485

Query: 1083 GALIGACRKHYAVALAEEELKHLLQLDFTDSGSLSMLSSIYAISGDWNNFANARLRMRNI 1262
            G L+GACR H  + LAE+ L  L++LD +D G+ S++S++YA +GDW N AN RL+MR+I
Sbjct: 486  GTLLGACRMHNDIELAEKALDQLVKLDPSDPGNFSIVSNMYAAAGDWENMANMRLQMRSI 545

Query: 1263 GCGKPSGASSVEVDNEFHEFTAMDQSHPKCDMVYEMIDGLTQHIK 1397
            G  K SGASS+EVD+E HEFT  D+ HP    +Y MI+ L + +K
Sbjct: 546  GVQKTSGASSIEVDDEVHEFTVFDRVHPYSSDIYGMINRLGEDLK 590



 Score = 92.0 bits (227), Expect = 9e-16
 Identities = 79/284 (27%), Positives = 129/284 (45%), Gaps = 6/284 (2%)
 Frame = +3

Query: 384  LISGYSKSGDLKTARILFEKMPAKNLVAWTTIIAAYAAKGIVKEAIALYDQMQVASMKPD 563
            LI+ +S    +  A  +F ++   N+  + T+I A+       +A A +  MQ   + PD
Sbjct: 57   LIAAFSLCRHMALAVNVFNQVHHPNVHLYNTLIRAHIHNNQPSQAFAAFFDMQAHGVYPD 116

Query: 564  EGTIIGILAACAASGVLGLGERIHYSLNKSGYRCSTRVLNTLIDMYAKCG--SLNGALTI 737
              T   +L AC+  G L +   IH  + K G+     V N+LID Y+KCG   +  A  +
Sbjct: 117  NFTFPFLLKACSGKGYLHVVLMIHAQIEKFGFCGDIFVPNSLIDTYSKCGLEGVGAARKL 176

Query: 738  FNGMEKKDITSWSTMIHASAIHGHGEMALHLFSKMKQEGFAPDRVTFIGILSACNHTGLV 917
            F  ME+KDI SW++MI   A  G    A  LF +M +     D V++  IL      G +
Sbjct: 177  FRVMEEKDIVSWNSMIGGLARAGELSDARQLFDEMPER----DAVSWNSILDGYAKAGKM 232

Query: 918  DEGIHLFYTMEKDYGVVPEIVHYGCMIDLLGRGGRLKEAFRLVQNMPFEPNNKIWGALIG 1097
            DE   LF  M +       +V +  ++    + G +  A  +   MPF+ N   W  +I 
Sbjct: 233  DEAFELFERMPQ-----RNVVSWSTLVSGYSKVGDMGMARMMFDRMPFK-NLVPWTIIIS 286

Query: 1098 ACRKHYAVALAEEELKHLLQLD----FTDSGSLSMLSSIYAISG 1217
                +    LA+E +    Q++      D+G++  + +  A SG
Sbjct: 287  G---YAQKGLAKEAIMLYDQMEGDGLKLDNGAIISILAACAESG 327


>ref|XP_003530418.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230-like
            [Glycine max]
          Length = 604

 Score =  545 bits (1404), Expect = e-152
 Identities = 260/466 (55%), Positives = 340/466 (72%), Gaps = 1/466 (0%)
 Frame = +3

Query: 3    ACSDQSWFKVVTLINTHLIKYGLFDDVLILNSLVNSYLNCGLMGFCLAEKLFSIMVDRDA 182
            AC+  S   +V +I+ H+ K+G + D+ + NSL++SY  CG  G   A  LF  M +RD 
Sbjct: 129  ACTGPSSLPLVRMIHAHVEKFGFYGDIFVPNSLIDSYSRCGSAGLDGAMSLFLAMKERDV 188

Query: 183  VTYNCMLSGLVKVGKLDEALKLFDEMPERDTVSWNIVLDGYVRSGDLNLAIELFEKMPSR 362
            VT+N M+ GLV+ G+L+ A KLFDEMPERD VSWN +LDGY ++G+++ A ELFE+MP R
Sbjct: 189  VTWNSMIGGLVRCGELEGACKLFDEMPERDMVSWNTMLDGYAKAGEMDRAFELFERMPQR 248

Query: 363  DSVSWCTLISGYSKSGDLKTARILFEKMPAKNLVAWTTIIAAYAAKGIVKEAIALYDQMQ 542
            + VSW T++ GYSK GD+  AR+LF++ PAKN+V WTTIIA YA KG V+EA  LY +M+
Sbjct: 249  NIVSWSTMVCGYSKGGDMDMARVLFDRCPAKNVVLWTTIIAGYAEKGFVREATELYGKME 308

Query: 543  VASMKPDEGTIIGILAACAASGVLGLGERIHYSLNKSGYRCSTRVLNTLIDMYAKCGSLN 722
             A ++PD+G +I ILAACA SG+LGLG+RIH S+ +  +RC T+VLN  IDMYAKCG L+
Sbjct: 309  EAGLRPDDGFLISILAACAESGMLGLGKRIHASMRRWRFRCGTKVLNAFIDMYAKCGCLD 368

Query: 723  GALTIFNG-MEKKDITSWSTMIHASAIHGHGEMALHLFSKMKQEGFAPDRVTFIGILSAC 899
             A  +F+G M KKD+ SW++MI   A+HGHGE AL LFS+M  EGF PD  TF+G+L AC
Sbjct: 369  AAFDVFSGMMAKKDVVSWNSMIQGFAMHGHGEKALELFSRMVPEGFEPDTYTFVGLLCAC 428

Query: 900  NHTGLVDEGIHLFYTMEKDYGVVPEIVHYGCMIDLLGRGGRLKEAFRLVQNMPFEPNNKI 1079
             H GLV+EG   FY+MEK YG+VP++ HYGCM+DLLGRGG LKEAF L+++MP EPN  I
Sbjct: 429  THAGLVNEGRKYFYSMEKVYGIVPQVEHYGCMMDLLGRGGHLKEAFTLLRSMPMEPNAII 488

Query: 1080 WGALIGACRKHYAVALAEEELKHLLQLDFTDSGSLSMLSSIYAISGDWNNFANARLRMRN 1259
             G L+ ACR H  V  A    + L +++ TD G+ S+LS+IYA +GDW N AN RL+M N
Sbjct: 489  LGTLLNACRMHNDVDFARAVCEQLFKVEPTDPGNYSLLSNIYAQAGDWMNVANVRLQMMN 548

Query: 1260 IGCGKPSGASSVEVDNEFHEFTAMDQSHPKCDMVYEMIDGLTQHIK 1397
             G  KPSGASS+EV+ E HEFT  DQSHPK D +Y+MID L Q ++
Sbjct: 549  TGGQKPSGASSIEVEEEVHEFTVFDQSHPKSDDIYKMIDRLVQDLR 594



 Score = 86.7 bits (213), Expect = 4e-14
 Identities = 98/363 (26%), Positives = 154/363 (42%), Gaps = 15/363 (4%)
 Frame = +3

Query: 384  LISGYSKSGDLKTARILFEKMPAKNLVAWTTIIAAYAAKGIVKEA-IALYDQMQVASMKP 560
            LI+ +S    L +A  +F  +P  N+  + +II A+A            + QMQ   + P
Sbjct: 59   LIAAFSLCRHLASAVNVFNHVPHPNVHLYNSIIRAHAHNTSHPSLPFNAFFQMQKNGLFP 118

Query: 561  DEGTIIGILAACAASGVLGLGERIHYSLNKSGYRCSTRVLNTLIDMYAKCGS--LNGALT 734
            D  T   +L AC     L L   IH  + K G+     V N+LID Y++CGS  L+GA++
Sbjct: 119  DNFTYPFLLKACTGPSSLPLVRMIHAHVEKFGFYGDIFVPNSLIDSYSRCGSAGLDGAMS 178

Query: 735  IFNGMEKKDITSWSTMIHASAIHGHGEMALHLFSKMKQEGFAPDRVTFIGILSACNHTGL 914
            +F  M+++D+ +W++MI      G  E A  LF +M +     D V++  +L      G 
Sbjct: 179  LFLAMKERDVVTWNSMIGGLVRCGELEGACKLFDEMPER----DMVSWNTMLDGYAKAGE 234

Query: 915  VDEGIHLFYTMEKDYGVVPEIVHYGCMIDLLGRGGRLKEAFRLVQNMPFEPNNKIWGALI 1094
            +D    LF  M +       IV +  M+    +GG +  A  L    P + N  +W  +I
Sbjct: 235  MDRAFELFERMPQ-----RNIVSWSTMVCGYSKGGDMDMARVLFDRCPAK-NVVLWTTII 288

Query: 1095 GACRKHYAVALAEEELKHLLQLDF-TDSGSLSMLSSIYAISG--DWNNFANARLRMRNIG 1265
                +   V  A E    + +     D G L  + +  A SG        +A +R     
Sbjct: 289  AGYAEKGFVREATELYGKMEEAGLRPDDGFLISILAACAESGMLGLGKRIHASMRRWRFR 348

Query: 1266 CGKPSGASSVE-------VDNEFHEFTAMDQSHPKCDMV--YEMIDGLTQHIKMRAAGHG 1418
            CG     + ++       +D  F  F+ M     K D+V    MI G   H      GHG
Sbjct: 349  CGTKVLNAFIDMYAKCGCLDAAFDVFSGM---MAKKDVVSWNSMIQGFAMH------GHG 399

Query: 1419 AEA 1427
             +A
Sbjct: 400  EKA 402


>ref|XP_003552546.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230-like
            [Glycine max]
          Length = 604

 Score =  540 bits (1391), Expect = e-151
 Identities = 259/466 (55%), Positives = 338/466 (72%), Gaps = 1/466 (0%)
 Frame = +3

Query: 3    ACSDQSWFKVVTLINTHLIKYGLFDDVLILNSLVNSYLNCGLMGFCLAEKLFSIMVDRDA 182
            ACS  S   +V +I+ H+ K G + D+ + NSL++SY  CG  G   A  LF  M +RD 
Sbjct: 129  ACSGPSSLPLVRMIHAHVEKIGFYGDIFVPNSLIDSYSRCGNAGLDGAMSLFLAMEERDV 188

Query: 183  VTYNCMLSGLVKVGKLDEALKLFDEMPERDTVSWNIVLDGYVRSGDLNLAIELFEKMPSR 362
            VT+N M+ GLV+ G+L  A KLFDEMP+RD VSWN +LDGY ++G+++ A ELFE+MP R
Sbjct: 189  VTWNSMIGGLVRCGELQGACKLFDEMPDRDMVSWNTMLDGYAKAGEMDTAFELFERMPWR 248

Query: 363  DSVSWCTLISGYSKSGDLKTARILFEKMPAKNLVAWTTIIAAYAAKGIVKEAIALYDQMQ 542
            + VSW T++ GYSK GD+  AR+LF++ P KN+V WTTIIA YA KG+ +EA  LY +M+
Sbjct: 249  NIVSWSTMVCGYSKGGDMDMARMLFDRCPVKNVVLWTTIIAGYAEKGLAREATELYGKME 308

Query: 543  VASMKPDEGTIIGILAACAASGVLGLGERIHYSLNKSGYRCSTRVLNTLIDMYAKCGSLN 722
             A M+PD+G ++ ILAACA SG+LGLG+RIH S+ +  +RC  +VLN  IDMYAKCG L+
Sbjct: 309  EAGMRPDDGFLLSILAACAESGMLGLGKRIHASMRRWRFRCGAKVLNAFIDMYAKCGCLD 368

Query: 723  GALTIFNG-MEKKDITSWSTMIHASAIHGHGEMALHLFSKMKQEGFAPDRVTFIGILSAC 899
             A  +F+G M KKD+ SW++MI   A+HGHGE AL LFS M QEGF PD  TF+G+L AC
Sbjct: 369  AAFDVFSGMMAKKDVVSWNSMIQGFAMHGHGEKALELFSWMVQEGFEPDTYTFVGLLCAC 428

Query: 900  NHTGLVDEGIHLFYTMEKDYGVVPEIVHYGCMIDLLGRGGRLKEAFRLVQNMPFEPNNKI 1079
             H GLV+EG   FY+MEK YG+VP++ HYGCM+DLLGRGG LKEAF L+++MP EPN  I
Sbjct: 429  THAGLVNEGRKYFYSMEKVYGIVPQVEHYGCMMDLLGRGGHLKEAFMLLRSMPMEPNAII 488

Query: 1080 WGALIGACRKHYAVALAEEELKHLLQLDFTDSGSLSMLSSIYAISGDWNNFANARLRMRN 1259
             G L+ ACR H  V LA    + L +L+ +D G+ S+LS+IYA +GDW N AN RL+M+N
Sbjct: 489  LGTLLNACRMHNDVDLARAVCEQLFKLEPSDPGNYSLLSNIYAQAGDWMNVANVRLQMKN 548

Query: 1260 IGCGKPSGASSVEVDNEFHEFTAMDQSHPKCDMVYEMIDGLTQHIK 1397
             G  KPSGASS+EV+ E HEFT  DQSHPK D +Y+MID L Q ++
Sbjct: 549  TGGEKPSGASSIEVEEEVHEFTVFDQSHPKSDDIYQMIDRLVQDLR 594



 Score = 85.5 bits (210), Expect = 8e-14
 Identities = 96/363 (26%), Positives = 153/363 (42%), Gaps = 15/363 (4%)
 Frame = +3

Query: 384  LISGYSKSGDLKTARILFEKMPAKNLVAWTTIIAAYAAKGIVKEA-IALYDQMQVASMKP 560
            LI+ +S    L +A  +F  +P  N+  + +II A+A     +      + QMQ   + P
Sbjct: 59   LIAAFSLCRHLASAVNVFNHVPHPNVHLYNSIIRAHAHNSSHRSLPFNAFFQMQKNGLFP 118

Query: 561  DEGTIIGILAACAASGVLGLGERIHYSLNKSGYRCSTRVLNTLIDMYAKCGS--LNGALT 734
            D  T   +L AC+    L L   IH  + K G+     V N+LID Y++CG+  L+GA++
Sbjct: 119  DNFTYPFLLKACSGPSSLPLVRMIHAHVEKIGFYGDIFVPNSLIDSYSRCGNAGLDGAMS 178

Query: 735  IFNGMEKKDITSWSTMIHASAIHGHGEMALHLFSKMKQEGFAPDRVTFIGILSACNHTGL 914
            +F  ME++D+ +W++MI      G  + A  LF +M       D V++  +L      G 
Sbjct: 179  LFLAMEERDVVTWNSMIGGLVRCGELQGACKLFDEMPDR----DMVSWNTMLDGYAKAGE 234

Query: 915  VDEGIHLFYTMEKDYGVVPEIVHYGCMIDLLGRGGRLKEAFRLVQNMPFEPNNKIWGALI 1094
            +D    LF  M         IV +  M+    +GG +  A  L    P + N  +W  +I
Sbjct: 235  MDTAFELFERMP-----WRNIVSWSTMVCGYSKGGDMDMARMLFDRCPVK-NVVLWTTII 288

Query: 1095 GACRKHYAVALAEEELKHLLQLDF-TDSGSLSMLSSIYAISG--DWNNFANARLRMRNIG 1265
                +      A E    + +     D G L  + +  A SG        +A +R     
Sbjct: 289  AGYAEKGLAREATELYGKMEEAGMRPDDGFLLSILAACAESGMLGLGKRIHASMRRWRFR 348

Query: 1266 CGKPSGASSVE-------VDNEFHEFTAMDQSHPKCDMV--YEMIDGLTQHIKMRAAGHG 1418
            CG     + ++       +D  F  F+ M     K D+V    MI G   H      GHG
Sbjct: 349  CGAKVLNAFIDMYAKCGCLDAAFDVFSGM---MAKKDVVSWNSMIQGFAMH------GHG 399

Query: 1419 AEA 1427
             +A
Sbjct: 400  EKA 402


>gb|ESW11550.1| hypothetical protein PHAVU_008G039700g [Phaseolus vulgaris]
          Length = 604

 Score =  538 bits (1385), Expect = e-150
 Identities = 258/466 (55%), Positives = 339/466 (72%), Gaps = 1/466 (0%)
 Frame = +3

Query: 3    ACSDQSWFKVVTLINTHLIKYGLFDDVLILNSLVNSYLNCGLMGFCLAEKLFSIMVDRDA 182
            AC+D S   +V +I+ H+ K+GL+ D+ + NSL++SY  CG  G   A  LF  M +RD 
Sbjct: 129  ACTDSSSLPLVRMIHAHVEKFGLYADIFVPNSLIDSYSRCGSSGLDGAMSLFLAMEERDV 188

Query: 183  VTYNCMLSGLVKVGKLDEALKLFDEMPERDTVSWNIVLDGYVRSGDLNLAIELFEKMPSR 362
            VT+N M+ GLV+ G+L+ A KLFDEMPERD VSWN +LDGY ++G+++ A +LFEK+P R
Sbjct: 189  VTWNSMIGGLVRCGELERARKLFDEMPERDMVSWNTMLDGYTKAGEMDKAFDLFEKIPER 248

Query: 363  DSVSWCTLISGYSKSGDLKTARILFEKMPAKNLVAWTTIIAAYAAKGIVKEAIALYDQMQ 542
            + VSW T++ GYSK+GD+  AR+LF+K P KN+V WTTIIA YA KG  +EA  LY +M+
Sbjct: 249  NIVSWSTMVCGYSKAGDIDMARMLFDKCPGKNVVLWTTIIAGYAEKGNAREATELYGKME 308

Query: 543  VASMKPDEGTIIGILAACAASGVLGLGERIHYSLNKSGYRCSTRVLNTLIDMYAKCGSLN 722
             A ++PD+G +  ILAACA SG+L LG R+H S+ K  +RC T+VLN  IDMYAKCG L+
Sbjct: 309  EAGLRPDDGFLFSILAACAKSGMLELGRRVHASVKKLRFRCGTKVLNAFIDMYAKCGCLD 368

Query: 723  GALTIFNG-MEKKDITSWSTMIHASAIHGHGEMALHLFSKMKQEGFAPDRVTFIGILSAC 899
             A  +F+G M KKD+ SW++MI A A+HGHG+ AL LFS+M  EGF PDR TF+G+L AC
Sbjct: 369  AASDVFSGMMAKKDVVSWNSMIQAFAMHGHGKKALELFSRMVDEGFEPDRCTFVGLLCAC 428

Query: 900  NHTGLVDEGIHLFYTMEKDYGVVPEIVHYGCMIDLLGRGGRLKEAFRLVQNMPFEPNNKI 1079
             H GLV+EG   FY+MEK +G+VPEI HYGCM+DLLGRGG L+EAF L++ MP EPN  I
Sbjct: 429  THAGLVNEGRKCFYSMEKVFGIVPEIDHYGCMVDLLGRGGHLEEAFMLLRRMPMEPNAII 488

Query: 1080 WGALIGACRKHYAVALAEEELKHLLQLDFTDSGSLSMLSSIYAISGDWNNFANARLRMRN 1259
             G L+ ACR H  V L     + L +L+ +D+G+ S+LS+IYA +GDW N AN RL+M+N
Sbjct: 489  LGTLLNACRMHNDVDLGRAVCEQLFKLEPSDAGNYSLLSNIYAQAGDWMNVANIRLQMKN 548

Query: 1260 IGCGKPSGASSVEVDNEFHEFTAMDQSHPKCDMVYEMIDGLTQHIK 1397
                KPSGASS+EV+ E HEFT  DQSHPK D +Y MID L Q ++
Sbjct: 549  TVRQKPSGASSIEVEEEVHEFTVFDQSHPKSDDIYRMIDRLVQDLQ 594



 Score = 86.3 bits (212), Expect = 5e-14
 Identities = 73/242 (30%), Positives = 116/242 (47%), Gaps = 5/242 (2%)
 Frame = +3

Query: 384  LISGYSKSGDLKTARILFEKMPAKNLVAWTTIIAAYAAKGIVKEA-IALYDQMQVASMKP 560
            LI+ +S    L +A  +F ++P  N+  + +II A+A            + QM  + + P
Sbjct: 59   LIAAFSLCRHLASAVNVFNQLPHPNVHLYNSIIRAHAHNHSHPSLPFNTFLQMLKSGLFP 118

Query: 561  DEGTIIGILAACAASGVLGLGERIHYSLNKSGYRCSTRVLNTLIDMYAKCGS--LNGALT 734
            D  T   +L AC  S  L L   IH  + K G      V N+LID Y++CGS  L+GA++
Sbjct: 119  DNFTYPSLLKACTDSSSLPLVRMIHAHVEKFGLYADIFVPNSLIDSYSRCGSSGLDGAMS 178

Query: 735  IFNGMEKKDITSWSTMIHASAIHGHGEMALHLFSKMKQEGFAPDRVTFIGILSACNHTGL 914
            +F  ME++D+ +W++MI      G  E A  LF +M +     D V++  +L      G 
Sbjct: 179  LFLAMEERDVVTWNSMIGGLVRCGELERARKLFDEMPER----DMVSWNTMLDGYTKAGE 234

Query: 915  VDEGIHLFYTMEKDYGVVPE--IVHYGCMIDLLGRGGRLKEAFRLVQNMPFEPNNKIWGA 1088
            +D+   LF   EK    +PE  IV +  M+    + G +  A  L    P + N  +W  
Sbjct: 235  MDKAFDLF---EK----IPERNIVSWSTMVCGYSKAGDIDMARMLFDKCPGK-NVVLWTT 286

Query: 1089 LI 1094
            +I
Sbjct: 287  II 288


>ref|XP_006290777.1| hypothetical protein CARUB_v10016882mg [Capsella rubella]
            gi|482559484|gb|EOA23675.1| hypothetical protein
            CARUB_v10016882mg [Capsella rubella]
          Length = 601

 Score =  534 bits (1375), Expect = e-149
 Identities = 249/464 (53%), Positives = 341/464 (73%), Gaps = 2/464 (0%)
 Frame = +3

Query: 3    ACSDQSWFKVVTLINTHLIKYGLFDDVLILNSLVNSYLNCGLMGFCLAEKLFSIMVDRDA 182
            ACS QSW  VV +I+ H+ K GL  D+ + N+L++ Y  CG +G   A KLF  M +RD 
Sbjct: 127  ACSGQSWLPVVKMIHNHIEKLGLSSDIYVPNALIDCYCRCGGLGVREAMKLFEKMGERDT 186

Query: 183  VTYNCMLSGLVKVGKLDEALKLFDEMPERDTVSWNIVLDGYVRSGDLNLAIELFEKMPSR 362
            V++N ML GLVK G+L +A +LFDEMP+RD +SWN +LDGY R  +++ A ELFEKMP R
Sbjct: 187  VSWNSMLGGLVKAGELRDARQLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPER 246

Query: 363  DSVSWCTLISGYSKSGDLKTARILFEKMP--AKNLVAWTTIIAAYAAKGIVKEAIALYDQ 536
             +VSW T++ GYSK+GD++ A+I+F+KMP  AKN+V WT IIA YA KG++KEA  L DQ
Sbjct: 247  STVSWSTMVMGYSKAGDMEMAKIMFDKMPLPAKNVVTWTIIIAGYAEKGLMKEADRLVDQ 306

Query: 537  MQVASMKPDEGTIIGILAACAASGVLGLGERIHYSLNKSGYRCSTRVLNTLIDMYAKCGS 716
            M  + ++ D    I ILAACA SG+LGLG R+H  + ++    +  VLN L+DMYAKCGS
Sbjct: 307  MVASGLRFDAAAAISILAACAESGLLGLGMRVHSIIKRTNLNSNASVLNALLDMYAKCGS 366

Query: 717  LNGALTIFNGMEKKDITSWSTMIHASAIHGHGEMALHLFSKMKQEGFAPDRVTFIGILSA 896
            +  A  +FN M KKD+ SW++M+H   +HGHG+ A+ LF +M++EG  PD+VTFI +L +
Sbjct: 367  VEKAFDVFNNMPKKDLVSWNSMLHGLGVHGHGKEAIELFLRMRKEGIQPDKVTFIAVLCS 426

Query: 897  CNHTGLVDEGIHLFYTMEKDYGVVPEIVHYGCMIDLLGRGGRLKEAFRLVQNMPFEPNNK 1076
            CNH GL+DEGI  FY+MEK Y +VP+I HYGC++DLLGRGGRLKEA ++VQ MP +PN  
Sbjct: 427  CNHAGLIDEGIDYFYSMEKVYDLVPQIEHYGCLVDLLGRGGRLKEAIKVVQTMPMQPNVV 486

Query: 1077 IWGALIGACRKHYAVALAEEELKHLLQLDFTDSGSLSMLSSIYAISGDWNNFANARLRMR 1256
            IWGAL+GACR H  V +A+E L HL++LD +D G+ ++LS+IYA + DW   A+ R +M+
Sbjct: 487  IWGALLGACRMHNKVDIAKEVLDHLVKLDPSDPGNYTLLSNIYAAAEDWAGVADIRSKMK 546

Query: 1257 NIGCGKPSGASSVEVDNEFHEFTAMDQSHPKCDMVYEMIDGLTQ 1388
            ++G  KPSGASSVE+++  HEFTA+D+SHPK D +Y+M+  L +
Sbjct: 547  SMGVEKPSGASSVELEDGIHEFTALDKSHPKSDQIYQMLGSLNE 590



 Score = 71.6 bits (174), Expect = 1e-09
 Identities = 88/367 (23%), Positives = 146/367 (39%), Gaps = 19/367 (5%)
 Frame = +3

Query: 384  LISGYSKSGDLKTARILFEKMPAKNLVAWTTIIAAYAAKGIVKEAIALYDQMQVASMKPD 563
            LIS  S       A  +F ++   N+    ++I A+A      +A  ++ +MQ   +  D
Sbjct: 58   LISALSLCRQTNLALRVFNQVQEPNVHLCNSLIRAHALNSQPYQAFFVFSEMQRFGLFAD 117

Query: 564  EGTIIGILAACAASGVLGLGERIHYSLNKSGYRCSTRVLNTLIDMYAKCGSL--NGALTI 737
              T   +L AC+    L + + IH  + K G      V N LID Y +CG L    A+ +
Sbjct: 118  NFTYPFLLKACSGQSWLPVVKMIHNHIEKLGLSSDIYVPNALIDCYCRCGGLGVREAMKL 177

Query: 738  FNGMEKKDITSWSTMIHASAIHGHGEMALHLFSKMKQEGFAPDRVTFIGILSACNHTGLV 917
            F  M ++D  SW++M+      G    A  LF +M Q     D +++  +L        +
Sbjct: 178  FEKMGERDTVSWNSMLGGLVKAGELRDARQLFDEMPQR----DLISWNTMLDGYARCREM 233

Query: 918  DEGIHLFYTMEKDYGVVPEIVHYGCMIDLLGRGGRLKEAFRLVQNMPFEPNNKI-WGALI 1094
             +   LF  M +        V +  M+    + G ++ A  +   MP    N + W  +I
Sbjct: 234  SKAFELFEKMPE-----RSTVSWSTMVMGYSKAGDMEMAKIMFDKMPLPAKNVVTWTIII 288

Query: 1095 GACRK----HYAVALAEEELKHLLQLD----------FTDSGSLSMLSSIYAISGDWNNF 1232
                +      A  L ++ +   L+ D            +SG L +   +++I    N  
Sbjct: 289  AGYAEKGLMKEADRLVDQMVASGLRFDAAAAISILAACAESGLLGLGMRVHSIIKRTNLN 348

Query: 1233 ANARLRMRNIGCGKPSGASSVEVDNEFHEFTAMDQSHPKCDMV--YEMIDGLTQHIKMRA 1406
            +NA +    +      G+    V+  F  F  M    PK D+V    M+ GL  H     
Sbjct: 349  SNASVLNALLDMYAKCGS----VEKAFDVFNNM----PKKDLVSWNSMLHGLGVH----- 395

Query: 1407 AGHGAEA 1427
             GHG EA
Sbjct: 396  -GHGKEA 401


>ref|XP_006395295.1| hypothetical protein EUTSA_v10003866mg [Eutrema salsugineum]
            gi|557091934|gb|ESQ32581.1| hypothetical protein
            EUTSA_v10003866mg [Eutrema salsugineum]
          Length = 598

 Score =  532 bits (1371), Expect = e-148
 Identities = 250/462 (54%), Positives = 333/462 (72%)
 Frame = +3

Query: 3    ACSDQSWFKVVTLINTHLIKYGLFDDVLILNSLVNSYLNCGLMGFCLAEKLFSIMVDRDA 182
            ACS QSW  VV +++ H+ K GL  D+ + N+L++ Y  CG MG   A KLF  M +RD 
Sbjct: 126  ACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGAMGVKAAMKLFVKMGERDT 185

Query: 183  VTYNCMLSGLVKVGKLDEALKLFDEMPERDTVSWNIVLDGYVRSGDLNLAIELFEKMPSR 362
            V++N ML GLVK G+L +A +LFDEMP RD +SWN +LDGY R  D+  A +LFE+MP R
Sbjct: 186  VSWNSMLGGLVKAGELRDARQLFDEMPHRDLISWNTMLDGYARCRDMTRAFQLFEQMPER 245

Query: 363  DSVSWCTLISGYSKSGDLKTARILFEKMPAKNLVAWTTIIAAYAAKGIVKEAIALYDQMQ 542
            ++VSW T++ GYSK+GD++ ARI+F+KMPAKN+V WT IIA YA KG+VKEA  L DQM 
Sbjct: 246  NTVSWSTMVMGYSKAGDMEMARIMFDKMPAKNVVTWTIIIAGYAEKGLVKEADRLVDQMV 305

Query: 543  VASMKPDEGTIIGILAACAASGVLGLGERIHYSLNKSGYRCSTRVLNTLIDMYAKCGSLN 722
             A +K D    I ILAACA SG+L LG R+H ++ +S    +  VLN L+DMYAKCG L 
Sbjct: 306  NAGLKFDAAAAISILAACAESGLLSLGMRVHSTIKRSNLGSNAYVLNALLDMYAKCGCLE 365

Query: 723  GALTIFNGMEKKDITSWSTMIHASAIHGHGEMALHLFSKMKQEGFAPDRVTFIGILSACN 902
             A  +FN M KKD+ SW+TM+    +HGHG+ A+ LFS+M++EG  PD+VTFI +L +CN
Sbjct: 366  RAFDVFNNMPKKDLVSWNTMLQGLGVHGHGKKAIELFSRMRREGVRPDKVTFIAVLCSCN 425

Query: 903  HTGLVDEGIHLFYTMEKDYGVVPEIVHYGCMIDLLGRGGRLKEAFRLVQNMPFEPNNKIW 1082
            H GLVDEGI  FY+MEK+Y +VP++ HYGC++DLLGRGGR+KEA  +VQ MP EPN  I 
Sbjct: 426  HAGLVDEGIDYFYSMEKEYDLVPQVEHYGCLVDLLGRGGRIKEAIEVVQTMPMEPNVVIL 485

Query: 1083 GALIGACRKHYAVALAEEELKHLLQLDFTDSGSLSMLSSIYAISGDWNNFANARLRMRNI 1262
            GAL+GACR H  V +A+E L HL++LD +D G+ S+LS+IYA + DW   AN R +M+++
Sbjct: 486  GALLGACRMHNEVDIAKEVLDHLVRLDPSDPGNYSLLSNIYAAAEDWEGVANIRSKMKSM 545

Query: 1263 GCGKPSGASSVEVDNEFHEFTAMDQSHPKCDMVYEMIDGLTQ 1388
            G  KPSGASS+ +++  HEFT  D+SHP  D +Y M+  L +
Sbjct: 546  GVEKPSGASSIALEDGIHEFTVFDKSHPNSDQIYHMLGSLIE 587



 Score = 64.3 bits (155), Expect = 2e-07
 Identities = 61/276 (22%), Positives = 119/276 (43%), Gaps = 4/276 (1%)
 Frame = +3

Query: 384  LISGYSKSGDLKTARILFEKMPAKNLVAWTTIIAAYAAKGIVKEAIALYDQMQVASMKPD 563
            LI+  S    +  A  +F ++   N+    ++I A+A      +A +++ +MQ   +  D
Sbjct: 57   LITALSLCRQMTLAVGVFNQVQQPNVHLCNSLIRAHAQNSQPYQAFSVFSEMQRIGLFAD 116

Query: 564  EGTIIGILAACAASGVLGLGERIHYSLNKSGYRCSTRVLNTLIDMYAKCGSL--NGALTI 737
              T   +L AC+    L + + +H  + K G      V N LID Y++CG++    A+ +
Sbjct: 117  NFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGAMGVKAAMKL 176

Query: 738  FNGMEKKDITSWSTMIHASAIHGHGEMALHLFSKMKQEGFAPDRVTFIGILSACNHTGLV 917
            F  M ++D  SW++M+      G    A  LF +M       D +++  +L        +
Sbjct: 177  FVKMGERDTVSWNSMLGGLVKAGELRDARQLFDEMPHR----DLISWNTMLDGYARCRDM 232

Query: 918  DEGIHLFYTMEKDYGVVPEIVHYGCMIDLLGRGGRLKEAFRLVQNMPFEPNNKIWGALIG 1097
                 LF  M +        V +  M+    + G ++ A  +   MP + N   W  +I 
Sbjct: 233  TRAFQLFEQMPE-----RNTVSWSTMVMGYSKAGDMEMARIMFDKMPAK-NVVTWTIIIA 286

Query: 1098 ACRKHYAVALAEEELKHLLQ--LDFTDSGSLSMLSS 1199
               +   V  A+  +  ++   L F  + ++S+L++
Sbjct: 287  GYAEKGLVKEADRLVDQMVNAGLKFDAAAAISILAA 322


>ref|XP_002875497.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297321335|gb|EFH51756.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 629

 Score =  530 bits (1366), Expect = e-148
 Identities = 250/464 (53%), Positives = 338/464 (72%), Gaps = 2/464 (0%)
 Frame = +3

Query: 3    ACSDQSWFKVVTLINTHLIKYGLFDDVLILNSLVNSYLNCGLMGFCLAEKLFSIMVDRDA 182
            ACS  SW  VV +++ H+ K GL  D+ + N+L++ Y  CG +G   A KLF  M +RD 
Sbjct: 126  ACSGLSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDT 185

Query: 183  VTYNCMLSGLVKVGKLDEALKLFDEMPERDTVSWNIVLDGYVRSGDLNLAIELFEKMPSR 362
            V++N ML GLVK G+L +A KLFDEMP+RD +SWN +LDGY R  +++ A ELFEKMP R
Sbjct: 186  VSWNSMLGGLVKAGELRDARKLFDEMPQRDLISWNTMLDGYARCREMSRAFELFEKMPER 245

Query: 363  DSVSWCTLISGYSKSGDLKTARILFEKMP--AKNLVAWTTIIAAYAAKGIVKEAIALYDQ 536
            ++VSW T++ GYSK+GD++ AR++F+KMP  AKN+V WT IIA YA KG++KEA  L DQ
Sbjct: 246  NTVSWSTMVMGYSKAGDMEMARVMFDKMPFPAKNVVTWTIIIAGYAEKGLLKEADKLVDQ 305

Query: 537  MQVASMKPDEGTIIGILAACAASGVLGLGERIHYSLNKSGYRCSTRVLNTLIDMYAKCGS 716
            M  + ++ D    I ILAACA SG+L LG R H  + KS    +  VLN L+DMYAKCGS
Sbjct: 306  MVASGLRFDAAAAISILAACAESGLLSLGMRAHSIIKKSNLNSNASVLNALLDMYAKCGS 365

Query: 717  LNGALTIFNGMEKKDITSWSTMIHASAIHGHGEMALHLFSKMKQEGFAPDRVTFIGILSA 896
            L  A  +FN M KKD+ SW+TM+H   +HGHG+ A+ LFS+M++EG  PD+VTFI +L +
Sbjct: 366  LKKAFDVFNDMPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRKEGIWPDKVTFIAVLCS 425

Query: 897  CNHTGLVDEGIHLFYTMEKDYGVVPEIVHYGCMIDLLGRGGRLKEAFRLVQNMPFEPNNK 1076
            CNH GL+DEGI  FY+MEK Y +VP++ HYGC++DLLGRGGRLKEA ++VQ MP EPN  
Sbjct: 426  CNHAGLIDEGIDYFYSMEKVYDLVPKVEHYGCLVDLLGRGGRLKEAIKVVQTMPMEPNVV 485

Query: 1077 IWGALIGACRKHYAVALAEEELKHLLQLDFTDSGSLSMLSSIYAISGDWNNFANARLRMR 1256
            IWGAL+GACR H  V +A+E L +L++LD +D G+ ++LS+IYA + DW   A+ R +M+
Sbjct: 486  IWGALLGACRMHNEVDIAKEVLDNLVKLDPSDPGNYTLLSNIYAAAEDWEGVADIRSKMK 545

Query: 1257 NIGCGKPSGASSVEVDNEFHEFTAMDQSHPKCDMVYEMIDGLTQ 1388
            ++G  KPSGASSVE+++  HEFT  D+SHPK D +Y+M+  L +
Sbjct: 546  SMGVEKPSGASSVELEDGIHEFTVFDKSHPKSDQIYQMLGSLIE 589



 Score = 70.5 bits (171), Expect = 3e-09
 Identities = 64/277 (23%), Positives = 119/277 (42%), Gaps = 5/277 (1%)
 Frame = +3

Query: 384  LISGYSKSGDLKTARILFEKMPAKNLVAWTTIIAAYAAKGIVKEAIALYDQMQVASMKPD 563
            LIS  S       A  +F ++   N+    ++I A+A      +A  ++ +MQ   +  D
Sbjct: 57   LISALSLCRQTNLALRVFNQVQEPNVHLCNSLIRAHALNSQPYQAFFVFSEMQRFGLFAD 116

Query: 564  EGTIIGILAACAASGVLGLGERIHYSLNKSGYRCSTRVLNTLIDMYAKCGSL--NGALTI 737
              T   +L AC+    L + + +H  + K G      V N LID Y++CG L    A+ +
Sbjct: 117  NFTYPFLLKACSGLSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKL 176

Query: 738  FNGMEKKDITSWSTMIHASAIHGHGEMALHLFSKMKQEGFAPDRVTFIGILSACNHTGLV 917
            F  M ++D  SW++M+      G    A  LF +M Q     D +++  +L        +
Sbjct: 177  FEKMSERDTVSWNSMLGGLVKAGELRDARKLFDEMPQR----DLISWNTMLDGYARCREM 232

Query: 918  DEGIHLFYTMEKDYGVVPEIVHYGCMIDLLGRGGRLKEAFRLVQNMPFEPNNKI-WGALI 1094
                 LF  M +        V +  M+    + G ++ A  +   MPF   N + W  +I
Sbjct: 233  SRAFELFEKMPE-----RNTVSWSTMVMGYSKAGDMEMARVMFDKMPFPAKNVVTWTIII 287

Query: 1095 GACRKHYAVALAEEELKHLLQ--LDFTDSGSLSMLSS 1199
                +   +  A++ +  ++   L F  + ++S+L++
Sbjct: 288  AGYAEKGLLKEADKLVDQMVASGLRFDAAAAISILAA 324


>ref|NP_189568.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75273910|sp|Q9LS72.1|PP261_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At3g29230 gi|9293916|dbj|BAB01819.1| unnamed protein
            product [Arabidopsis thaliana]
            gi|332644032|gb|AEE77553.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 600

 Score =  529 bits (1362), Expect = e-147
 Identities = 249/464 (53%), Positives = 338/464 (72%), Gaps = 2/464 (0%)
 Frame = +3

Query: 3    ACSDQSWFKVVTLINTHLIKYGLFDDVLILNSLVNSYLNCGLMGFCLAEKLFSIMVDRDA 182
            ACS QSW  VV +++ H+ K GL  D+ + N+L++ Y  CG +G   A KLF  M +RD 
Sbjct: 126  ACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDT 185

Query: 183  VTYNCMLSGLVKVGKLDEALKLFDEMPERDTVSWNIVLDGYVRSGDLNLAIELFEKMPSR 362
            V++N ML GLVK G+L +A +LFDEMP+RD +SWN +LDGY R  +++ A ELFEKMP R
Sbjct: 186  VSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPER 245

Query: 363  DSVSWCTLISGYSKSGDLKTARILFEKMP--AKNLVAWTTIIAAYAAKGIVKEAIALYDQ 536
            ++VSW T++ GYSK+GD++ AR++F+KMP  AKN+V WT IIA YA KG++KEA  L DQ
Sbjct: 246  NTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQ 305

Query: 537  MQVASMKPDEGTIIGILAACAASGVLGLGERIHYSLNKSGYRCSTRVLNTLIDMYAKCGS 716
            M  + +K D   +I ILAAC  SG+L LG RIH  L +S    +  VLN L+DMYAKCG+
Sbjct: 306  MVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGN 365

Query: 717  LNGALTIFNGMEKKDITSWSTMIHASAIHGHGEMALHLFSKMKQEGFAPDRVTFIGILSA 896
            L  A  +FN + KKD+ SW+TM+H   +HGHG+ A+ LFS+M++EG  PD+VTFI +L +
Sbjct: 366  LKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCS 425

Query: 897  CNHTGLVDEGIHLFYTMEKDYGVVPEIVHYGCMIDLLGRGGRLKEAFRLVQNMPFEPNNK 1076
            CNH GL+DEGI  FY+MEK Y +VP++ HYGC++DLLGR GRLKEA ++VQ MP EPN  
Sbjct: 426  CNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVV 485

Query: 1077 IWGALIGACRKHYAVALAEEELKHLLQLDFTDSGSLSMLSSIYAISGDWNNFANARLRMR 1256
            IWGAL+GACR H  V +A+E L +L++LD  D G+ S+LS+IYA + DW   A+ R +M+
Sbjct: 486  IWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMK 545

Query: 1257 NIGCGKPSGASSVEVDNEFHEFTAMDQSHPKCDMVYEMIDGLTQ 1388
            ++G  KPSGASSVE+++  HEFT  D+SHPK D +Y+M+  L +
Sbjct: 546  SMGVEKPSGASSVELEDGIHEFTVFDKSHPKSDQIYQMLGSLIE 589



 Score = 70.1 bits (170), Expect = 4e-09
 Identities = 91/371 (24%), Positives = 148/371 (39%), Gaps = 23/371 (6%)
 Frame = +3

Query: 384  LISGYSKSGDLKTARILFEKMPAKNLVAWTTIIAAYAAKGIVKEAIALYDQMQVASMKPD 563
            LIS  S       A  +F ++   N+    ++I A+A      +A  ++ +MQ   +  D
Sbjct: 57   LISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFAD 116

Query: 564  EGTIIGILAACAASGVLGLGERIHYSLNKSGYRCSTRVLNTLIDMYAKCGSL--NGALTI 737
              T   +L AC+    L + + +H  + K G      V N LID Y++CG L    A+ +
Sbjct: 117  NFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKL 176

Query: 738  FNGMEKKDITSWSTMIHASAIHGHGEMALHLFSKMKQEGFAPDRVTFIGILSACNHTGLV 917
            F  M ++D  SW++M+      G    A  LF +M Q     D +++  +L        +
Sbjct: 177  FEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQR----DLISWNTMLDGYARCREM 232

Query: 918  DEGIHLFYTMEKDYGVVPEIVHYGCMIDLLGRGGRLKEAFRLVQNMPFEPNNKI-WGALI 1094
             +   LF  M +        V +  M+    + G ++ A  +   MP    N + W  +I
Sbjct: 233  SKAFELFEKMPE-----RNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIII 287

Query: 1095 GACRK----HYAVALAEEELKHLLQLD----------FTDSGSLSMLSSIYAISGDWNNF 1232
                +      A  L ++ +   L+ D           T+SG LS+   I++I    N  
Sbjct: 288  AGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLG 347

Query: 1233 ANA----RLRMRNIGCGKPSGASSVEVDNEFHEFTAMDQSHPKCDMV--YEMIDGLTQHI 1394
            +NA     L      CG    A  V     F++        PK D+V    M+ GL  H 
Sbjct: 348  SNAYVLNALLDMYAKCGNLKKAFDV-----FNDI-------PKKDLVSWNTMLHGLGVH- 394

Query: 1395 KMRAAGHGAEA 1427
                 GHG EA
Sbjct: 395  -----GHGKEA 400


>ref|XP_003621319.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355496334|gb|AES77537.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 605

 Score =  518 bits (1333), Expect = e-144
 Identities = 251/461 (54%), Positives = 337/461 (73%), Gaps = 1/461 (0%)
 Frame = +3

Query: 18   SWFKVVTLINTHLIKYGLFDDVLILNSLVNSYLNCGLMGFCLAEKLFSIMVDRDAVTYNC 197
            SW  +V +++ H+ K G + D+ + NSL++ Y  CG +   +A K+FS M +RD V++N 
Sbjct: 138  SWLSLVKMVHAHVEKLGFYWDIFVPNSLIDCYCRCGDVE--MAMKVFSGMEERDVVSWNS 195

Query: 198  MLSGLVKVGKLDEALKLFDEMPERDTVSWNIVLDGYVRSGDLNLAIELFEKMPSRDSVSW 377
            M+ GLVK G LD ALK+FDEMPERD VSWN +LDG+ ++G+++ A +LFE+M  RD VSW
Sbjct: 196  MVGGLVKNGDLDGALKVFDEMPERDRVSWNTMLDGFTKAGEMDKAFKLFERMAERDIVSW 255

Query: 378  CTLISGYSKSGDLKTARILFEKMPAKNLVAWTTIIAAYAAKGIVKEAIALYDQMQVASMK 557
             T++ GYSK+GD+  AR+LF++ P KNLV WTTII+ YA KG VKEA+ L D+M+ + ++
Sbjct: 256  STMVCGYSKNGDMDMARMLFDRCPVKNLVLWTTIISGYAEKGQVKEAMNLCDEMEKSGLR 315

Query: 558  PDEGTIIGILAACAASGVLGLGERIHYSLNKSGYRCSTRVLNTLIDMYAKCGSLNGALTI 737
             D+G  I ILAACA SG+LGLG+++H S  +S +RCST+VLN+ IDMYAKCG ++ A  +
Sbjct: 316  LDDGFFISILAACAESGMLGLGKKMHDSFLRSRFRCSTKVLNSFIDMYAKCGCVDDAFRV 375

Query: 738  FNGME-KKDITSWSTMIHASAIHGHGEMALHLFSKMKQEGFAPDRVTFIGILSACNHTGL 914
            FNGM+ +KD+ SW++MIH   IHGHGE ++ LF+ M +EGF PDR TFIG+L AC H GL
Sbjct: 376  FNGMKTEKDLVSWNSMIHGFGIHGHGEKSIELFNTMVREGFKPDRYTFIGLLCACTHAGL 435

Query: 915  VDEGIHLFYTMEKDYGVVPEIVHYGCMIDLLGRGGRLKEAFRLVQNMPFEPNNKIWGALI 1094
            V+EG   FY+M++ YG+VP+I HYGCM+DLLGRGG LKEAF LV++MPFEPN  I G L+
Sbjct: 436  VNEGRGYFYSMQRVYGIVPQIEHYGCMVDLLGRGGHLKEAFWLVRSMPFEPNAIILGTLL 495

Query: 1095 GACRKHYAVALAEEELKHLLQLDFTDSGSLSMLSSIYAISGDWNNFANARLRMRNIGCGK 1274
            GACR H  V LA    K+L +L  +D G+ S+LS+IYA SGDW N A  R +M + G  K
Sbjct: 496  GACRMHNDVKLATSVSKYLFKLVPSDPGNFSLLSNIYAQSGDWINVAKVRKQMNDEGGQK 555

Query: 1275 PSGASSVEVDNEFHEFTAMDQSHPKCDMVYEMIDGLTQHIK 1397
            PSG SS+EV+ E HEFT  D SHPK   +Y MID L   ++
Sbjct: 556  PSGVSSIEVEEEVHEFTVRDWSHPKSGDIYNMIDRLVHDLR 596



 Score = 96.7 bits (239), Expect = 4e-17
 Identities = 76/280 (27%), Positives = 137/280 (48%), Gaps = 8/280 (2%)
 Frame = +3

Query: 384  LISGYSKSGDLKTARILFEKMPAKNLVAWTTIIAAYAAKGIVKEAIALYD---QMQVASM 554
            LI+ YS + +L +A  +F ++P  N+  +  +I AY+  G    ++  +    +M V  +
Sbjct: 60   LIASYSLTNNLSSAVNVFNQVPDPNVHLYNYLIRAYSLSGNESNSLCAFGVLLKMHVDGV 119

Query: 555  KPDEGTIIGILAAC-AASGVLGLGERIHYSLNKSGYRCSTRVLNTLIDMYAKCGSLNGAL 731
              D  T   +L  C  +S  L L + +H  + K G+     V N+LID Y +CG +  A+
Sbjct: 120  LADNFTYPFLLKGCNGSSSWLSLVKMVHAHVEKLGFYWDIFVPNSLIDCYCRCGDVEMAM 179

Query: 732  TIFNGMEKKDITSWSTMIHASAIHGHGEMALHLFSKMKQEGFAPDRVTFIGILSACNHTG 911
             +F+GME++D+ SW++M+     +G  + AL +F +M +     DRV++  +L      G
Sbjct: 180  KVFSGMEERDVVSWNSMVGGLVKNGDLDGALKVFDEMPER----DRVSWNTMLDGFTKAG 235

Query: 912  LVDEGIHLFYTMEKDYGVVPEIVHYGCMIDLLGRGGRLKEAFRLVQNMPFEPNNKIWGAL 1091
             +D+   LF  M +      +IV +  M+    + G +  A  L    P + N  +W  +
Sbjct: 236  EMDKAFKLFERMAE-----RDIVSWSTMVCGYSKNGDMDMARMLFDRCPVK-NLVLWTTI 289

Query: 1092 IGACRK----HYAVALAEEELKHLLQLDFTDSGSLSMLSS 1199
            I    +      A+ L +E  K  L+LD  D   +S+L++
Sbjct: 290  ISGYAEKGQVKEAMNLCDEMEKSGLRLD--DGFFISILAA 327