BLASTX nr result

ID: Catharanthus23_contig00016479 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00016479
         (420 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006357627.1| PREDICTED: uncharacterized protein LOC102590...    70   2e-10
ref|XP_006367900.1| PREDICTED: agamous-like MADS-box protein AGL...    66   5e-09
ref|XP_006365206.1| PREDICTED: uncharacterized protein LOC102595...    65   9e-09
ref|XP_006349351.1| PREDICTED: uncharacterized protein LOC102598...    65   1e-08
gb|AAX95761.1| SRF-type transcription factor family protein [Sol...    64   2e-08
ref|XP_006361194.1| PREDICTED: uncharacterized protein LOC102583...    64   3e-08
ref|XP_006365204.1| PREDICTED: uncharacterized protein LOC102595...    63   4e-08
ref|XP_006359371.1| PREDICTED: uncharacterized protein LOC102590...    62   8e-08
ref|XP_002311944.2| hypothetical protein POPTR_0008s02120g [Popu...    62   1e-07
ref|XP_002316498.1| hypothetical protein POPTR_0010s24540g [Popu...    59   5e-07
gb|AEF32134.1| MADS-box protein, partial [Betula platyphylla]          58   1e-06
ref|XP_003621328.1| Type I MADS box transcription factor [Medica...    57   2e-06
ref|NP_188495.1| protein agamous-like 103 [Arabidopsis thaliana]...    57   3e-06
ref|XP_006850973.1| hypothetical protein AMTR_s00025p00207310 [A...    56   6e-06
ref|XP_002531416.1| mads box protein, putative [Ricinus communis...    55   7e-06

>ref|XP_006357627.1| PREDICTED: uncharacterized protein LOC102590916 [Solanum tuberosum]
          Length = 219

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 28/54 (51%), Positives = 40/54 (74%)
 Frame = +2

Query: 257 LSYRKGKETIKRKAKELSILCDIPVCAVITSPNGETETWPTSLSELKPIFQMYR 418
           L+Y+K KETIK+K +ELSILCDI  C ++  P+GE +TWP + ++  PI Q Y+
Sbjct: 10  LNYKKKKETIKKKTRELSILCDIKACVILVDPDGEVDTWPENPTDFNPIIQSYK 63


>ref|XP_006367900.1| PREDICTED: agamous-like MADS-box protein AGL86-like [Solanum
           tuberosum]
          Length = 130

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 28/52 (53%), Positives = 37/52 (71%)
 Frame = +2

Query: 260 SYRKGKETIKRKAKELSILCDIPVCAVITSPNGETETWPTSLSELKPIFQMY 415
           +Y++ KE IKRK+ EL+ LCDI VC VIT PNGE +TWP +L   K +  +Y
Sbjct: 16  TYQERKECIKRKSMELATLCDIKVCTVITGPNGELQTWPDNLDACKEVLDLY 67


>ref|XP_006365206.1| PREDICTED: uncharacterized protein LOC102595746 [Solanum tuberosum]
          Length = 262

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 28/52 (53%), Positives = 37/52 (71%)
 Frame = +2

Query: 260 SYRKGKETIKRKAKELSILCDIPVCAVITSPNGETETWPTSLSELKPIFQMY 415
           SY++ KE IKRK+ +L+ LCDI VC VITSPNGE +TWP +L     +  +Y
Sbjct: 16  SYQERKECIKRKSMKLATLCDIKVCTVITSPNGELQTWPDNLDAYNEVLDLY 67


>ref|XP_006349351.1| PREDICTED: uncharacterized protein LOC102598839 [Solanum tuberosum]
          Length = 139

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 28/52 (53%), Positives = 36/52 (69%)
 Frame = +2

Query: 260 SYRKGKETIKRKAKELSILCDIPVCAVITSPNGETETWPTSLSELKPIFQMY 415
           SY+  KE IKRK+ EL+ LCDI VC VIT PNG+ +TWP +L   K +  +Y
Sbjct: 24  SYQVRKECIKRKSMELATLCDIKVCTVITGPNGQLQTWPDNLDACKEVLDLY 75


>gb|AAX95761.1| SRF-type transcription factor family protein [Solanum lycopersicum]
          Length = 130

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 29/58 (50%), Positives = 35/58 (60%)
 Frame = +2

Query: 242 RQRRSLSYRKGKETIKRKAKELSILCDIPVCAVITSPNGETETWPTSLSELKPIFQMY 415
           R     SY+  KE IKRK+ EL+ LCDI VC VIT PNGE +TWP      K +  +Y
Sbjct: 10  RTNNPKSYQVRKECIKRKSMELATLCDIKVCTVITGPNGELQTWPDDFDACKQVLDLY 67


>ref|XP_006361194.1| PREDICTED: uncharacterized protein LOC102583257 [Solanum tuberosum]
          Length = 131

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 28/52 (53%), Positives = 35/52 (67%)
 Frame = +2

Query: 260 SYRKGKETIKRKAKELSILCDIPVCAVITSPNGETETWPTSLSELKPIFQMY 415
           SY+  KE IKRK+ EL+ LCDI VC VI  PNGE +TWP +L   K +  +Y
Sbjct: 16  SYQVRKECIKRKSMELATLCDIKVCTVIIGPNGELQTWPDNLDACKEVLDLY 67


>ref|XP_006365204.1| PREDICTED: uncharacterized protein LOC102595092 [Solanum tuberosum]
          Length = 131

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 28/51 (54%), Positives = 34/51 (66%)
 Frame = +2

Query: 263 YRKGKETIKRKAKELSILCDIPVCAVITSPNGETETWPTSLSELKPIFQMY 415
           Y+  KE IKRK+ EL  LCDI VC VIT PNGE +TWP +L   K +  +Y
Sbjct: 17  YQGRKECIKRKSMELENLCDIKVCTVITGPNGELQTWPDNLDACKEVLDLY 67


>ref|XP_006359371.1| PREDICTED: uncharacterized protein LOC102590928 [Solanum tuberosum]
          Length = 128

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 27/51 (52%), Positives = 34/51 (66%)
 Frame = +2

Query: 263 YRKGKETIKRKAKELSILCDIPVCAVITSPNGETETWPTSLSELKPIFQMY 415
           Y+  KE IK K+ EL+ LCDI VC VIT PNGE +TWP +L   K +  +Y
Sbjct: 17  YQGRKECIKTKSMELATLCDIKVCTVITGPNGELQTWPDNLDACKEVLDLY 67


>ref|XP_002311944.2| hypothetical protein POPTR_0008s02120g [Populus trichocarpa]
           gi|550332213|gb|EEE89311.2| hypothetical protein
           POPTR_0008s02120g [Populus trichocarpa]
          Length = 203

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 24/58 (41%), Positives = 37/58 (63%)
 Frame = +2

Query: 245 QRRSLSYRKGKETIKRKAKELSILCDIPVCAVITSPNGETETWPTSLSELKPIFQMYR 418
           +R + SY   K T+K+K +EL+ILCD+PVC +   P+G TETWP     +  + + Y+
Sbjct: 7   KRTTKSYEDRKNTLKKKTRELAILCDVPVCLICVDPDGTTETWPEEKERVVDVLKAYK 64


>ref|XP_002316498.1| hypothetical protein POPTR_0010s24540g [Populus trichocarpa]
           gi|222865538|gb|EEF02669.1| hypothetical protein
           POPTR_0010s24540g [Populus trichocarpa]
          Length = 210

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 23/56 (41%), Positives = 36/56 (64%)
 Frame = +2

Query: 251 RSLSYRKGKETIKRKAKELSILCDIPVCAVITSPNGETETWPTSLSELKPIFQMYR 418
           ++ SY + K+ +K+KA EL+ LCD+PVC V  +P+G TETWP     +  +   Y+
Sbjct: 13  KNKSYEERKQNLKKKASELATLCDVPVCLVCVNPDGSTETWPEEEERVVDVLMAYK 68


>gb|AEF32134.1| MADS-box protein, partial [Betula platyphylla]
          Length = 166

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 24/53 (45%), Positives = 36/53 (67%)
 Frame = +2

Query: 260 SYRKGKETIKRKAKELSILCDIPVCAVITSPNGETETWPTSLSELKPIFQMYR 418
           +YR+   T+K+KA EL+ LC+IPVC +   P+G  ETWP S  +++ I + YR
Sbjct: 22  TYRRRNPTLKKKALELAELCNIPVCVISYGPDGTVETWPESREDVEAIIEKYR 74


>ref|XP_003621328.1| Type I MADS box transcription factor [Medicago truncatula]
           gi|355496343|gb|AES77546.1| Type I MADS box
           transcription factor [Medicago truncatula]
          Length = 159

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 27/57 (47%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
 Frame = +2

Query: 251 RSLSYRKGKETIKRKAKELSILCDIPVCAVITSP-NGETETWPTSLSELKPIFQMYR 418
           R  SY+K K+TI +K +EL+ILC IP CA+I+ P + +TE WP +L E K + + Y+
Sbjct: 17  RKASYKKRKKTIIKKVRELTILCGIPACAIISDPFDSKTEVWP-NLKEAKQVIERYQ 72


>ref|NP_188495.1| protein agamous-like 103 [Arabidopsis thaliana]
           gi|9293888|dbj|BAB01791.1| unnamed protein product
           [Arabidopsis thaliana] gi|119360153|gb|ABL66805.1|
           At3g18650 [Arabidopsis thaliana]
           gi|332642605|gb|AEE76126.1| protein agamous-like 103
           [Arabidopsis thaliana]
          Length = 386

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 26/55 (47%), Positives = 36/55 (65%)
 Frame = +2

Query: 251 RSLSYRKGKETIKRKAKELSILCDIPVCAVITSPNGETETWPTSLSELKPIFQMY 415
           R+ S  K ++T+ +KAKELSILCDI VC +    NGE +TWP    ++K I + Y
Sbjct: 32  RATSLIKRQQTVFKKAKELSILCDIDVCVICYGSNGELKTWPEEREKVKAIARRY 86


>ref|XP_006850973.1| hypothetical protein AMTR_s00025p00207310 [Amborella trichopoda]
           gi|548854644|gb|ERN12554.1| hypothetical protein
           AMTR_s00025p00207310 [Amborella trichopoda]
          Length = 328

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 25/56 (44%), Positives = 35/56 (62%)
 Frame = +2

Query: 248 RRSLSYRKGKETIKRKAKELSILCDIPVCAVITSPNGETETWPTSLSELKPIFQMY 415
           +R+ ++RK K+ +K+KA E SILC +  C V  SPNG+ ETWP   S    + Q Y
Sbjct: 6   QRNDTFRKRKKGLKKKASEFSILCGVDTCLVSFSPNGDLETWPEDKSACMNVVQRY 61


>ref|XP_002531416.1| mads box protein, putative [Ricinus communis]
           gi|223528966|gb|EEF30958.1| mads box protein, putative
           [Ricinus communis]
          Length = 330

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 23/56 (41%), Positives = 33/56 (58%)
 Frame = +2

Query: 251 RSLSYRKGKETIKRKAKELSILCDIPVCAVITSPNGETETWPTSLSELKPIFQMYR 418
           ++ S+ K K T+K+KA+EL  LCD+PVC V   PNG  + WP      K +   Y+
Sbjct: 43  KTASFYKRKPTLKKKAQELHTLCDVPVCVVCFGPNGSVDVWPEEEQCAKELMMSYK 98


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