BLASTX nr result

ID: Catharanthus23_contig00016441 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00016441
         (497 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EPS59254.1| hypothetical protein M569_15556 [Genlisea aurea]        59   7e-07
ref|XP_004241206.1| PREDICTED: transcription elongation factor B...    57   3e-06
ref|XP_002282124.1| PREDICTED: transcription elongation factor B...    56   4e-06
emb|CAN62731.1| hypothetical protein VITISV_031983 [Vitis vinifera]    56   4e-06
ref|XP_002520493.1| Transcription elongation factor B polypeptid...    56   6e-06
ref|XP_006663134.1| PREDICTED: transcription elongation factor B...    55   7e-06
gb|ESW22352.1| hypothetical protein PHAVU_005G146900g [Phaseolus...    55   1e-05
gb|ESW22351.1| hypothetical protein PHAVU_005G146900g [Phaseolus...    55   1e-05

>gb|EPS59254.1| hypothetical protein M569_15556 [Genlisea aurea]
          Length = 98

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 28/38 (73%), Positives = 32/38 (84%)
 Frame = -2

Query: 124 MKKKNMAKLISAEGFKFFIDKKAAMISQIIRNILISPG 11
           MKK+ M KLISAEGF+F IDKKAAM+SQ IRN+  SPG
Sbjct: 1   MKKEGMVKLISAEGFEFVIDKKAAMVSQTIRNMFTSPG 38


>ref|XP_004241206.1| PREDICTED: transcription elongation factor B polypeptide 1-like
           isoform 1 [Solanum lycopersicum]
           gi|460391192|ref|XP_004241207.1| PREDICTED:
           transcription elongation factor B polypeptide 1-like
           isoform 2 [Solanum lycopersicum]
           gi|565368319|ref|XP_006350794.1| PREDICTED:
           transcription elongation factor B polypeptide 1-like
           [Solanum tuberosum]
          Length = 98

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 27/38 (71%), Positives = 32/38 (84%)
 Frame = -2

Query: 124 MKKKNMAKLISAEGFKFFIDKKAAMISQIIRNILISPG 11
           MKK++  KLIS EGF+F IDKKAAM+SQ IRN+L SPG
Sbjct: 1   MKKEDTVKLISREGFEFIIDKKAAMVSQTIRNMLTSPG 38


>ref|XP_002282124.1| PREDICTED: transcription elongation factor B polypeptide 1 [Vitis
           vinifera]
          Length = 98

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 26/38 (68%), Positives = 33/38 (86%)
 Frame = -2

Query: 124 MKKKNMAKLISAEGFKFFIDKKAAMISQIIRNILISPG 11
           M+K++  KLISAEGF+F IDK+AAM+SQ IRN+L SPG
Sbjct: 1   MRKEDTVKLISAEGFEFVIDKRAAMVSQTIRNMLTSPG 38


>emb|CAN62731.1| hypothetical protein VITISV_031983 [Vitis vinifera]
          Length = 353

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 26/38 (68%), Positives = 33/38 (86%)
 Frame = -2

Query: 124 MKKKNMAKLISAEGFKFFIDKKAAMISQIIRNILISPG 11
           M+K++  KLISAEGF+F IDK+AAM+SQ IRN+L SPG
Sbjct: 1   MRKEDTVKLISAEGFEFVIDKRAAMVSQTIRNMLTSPG 38


>ref|XP_002520493.1| Transcription elongation factor B polypeptide, putative [Ricinus
           communis] gi|223540335|gb|EEF41906.1| Transcription
           elongation factor B polypeptide, putative [Ricinus
           communis]
          Length = 98

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 26/38 (68%), Positives = 33/38 (86%)
 Frame = -2

Query: 124 MKKKNMAKLISAEGFKFFIDKKAAMISQIIRNILISPG 11
           M+K++  KLISAEGF+F IDK+AAM+SQ IRN+L SPG
Sbjct: 1   MRKEDTVKLISAEGFEFVIDKEAAMVSQTIRNMLTSPG 38


>ref|XP_006663134.1| PREDICTED: transcription elongation factor B polypeptide 1-like
           [Oryza brachyantha]
          Length = 124

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 25/46 (54%), Positives = 33/46 (71%)
 Frame = -2

Query: 148 DSDSDKLEMKKKNMAKLISAEGFKFFIDKKAAMISQIIRNILISPG 11
           D+D D  +     + KLISAEGF+F +DKKAAM+S  +RN+L SPG
Sbjct: 18  DADDDSTDEAPHGVVKLISAEGFEFVVDKKAAMVSNTLRNMLTSPG 63


>gb|ESW22352.1| hypothetical protein PHAVU_005G146900g [Phaseolus vulgaris]
          Length = 145

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 25/39 (64%), Positives = 33/39 (84%)
 Frame = -2

Query: 127 EMKKKNMAKLISAEGFKFFIDKKAAMISQIIRNILISPG 11
           +MKK++  KLISAEGF+F +DK+AAM+SQ I N+L SPG
Sbjct: 47  KMKKEDTVKLISAEGFEFVVDKEAAMVSQTIHNMLTSPG 85


>gb|ESW22351.1| hypothetical protein PHAVU_005G146900g [Phaseolus vulgaris]
          Length = 124

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 25/39 (64%), Positives = 33/39 (84%)
 Frame = -2

Query: 127 EMKKKNMAKLISAEGFKFFIDKKAAMISQIIRNILISPG 11
           +MKK++  KLISAEGF+F +DK+AAM+SQ I N+L SPG
Sbjct: 47  KMKKEDTVKLISAEGFEFVVDKEAAMVSQTIHNMLTSPG 85


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