BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00016436
         (1713 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004230453.1| PREDICTED: tRNA pseudouridine synthase A-lik...   273   2e-70
ref|XP_006349329.1| PREDICTED: tRNA pseudouridine synthase-like ...   271   5e-70
gb|EMJ23285.1| hypothetical protein PRUPE_ppa007576m1g, partial ...   269   2e-69
gb|ESW20555.1| hypothetical protein PHAVU_006G218900g [Phaseolus...   268   4e-69
gb|ESW20554.1| hypothetical protein PHAVU_006G218900g [Phaseolus...   268   4e-69
ref|XP_004309887.1| PREDICTED: tRNA pseudouridine synthase A-lik...   266   2e-68
ref|XP_002263416.1| PREDICTED: tRNA pseudouridine synthase A [Vi...   266   2e-68
ref|XP_003540148.1| PREDICTED: tRNA pseudouridine synthase-like ...   264   8e-68
ref|NP_001242177.1| uncharacterized protein LOC100799818 [Glycin...   262   3e-67
ref|XP_004485453.1| PREDICTED: tRNA pseudouridine synthase A-lik...   258   4e-66
ref|XP_002526453.1| pseudouridylate synthase, putative [Ricinus ...   258   4e-66
gb|ABE79574.2| tRNA pseudouridine synthase [Medicago truncatula]      253   2e-64
gb|EOX97061.1| Pseudouridine synthase family protein isoform 3 [...   249   3e-63
gb|EOX97059.1| Pseudouridine synthase family protein isoform 1 [...   249   3e-63
ref|XP_006389535.1| hypothetical protein POPTR_0022s00690g [Popu...   248   6e-63
ref|XP_002331109.1| predicted protein [Populus trichocarpa]           248   6e-63
ref|XP_006417534.1| hypothetical protein EUTSA_v10007981mg [Eutr...   244   8e-62
ref|XP_003592926.1| tRNA pseudouridine synthase A [Medicago trun...   244   1e-61
ref|XP_006471141.1| PREDICTED: tRNA pseudouridine synthase-like ...   243   2e-61
ref|XP_006471140.1| PREDICTED: tRNA pseudouridine synthase-like ...   243   2e-61

>ref|XP_004230453.1| PREDICTED: tRNA pseudouridine synthase A-like [Solanum lycopersicum]
          Length = 389

 Score =  273 bits (698), Expect = 2e-70
 Identities = 137/200 (68%), Positives = 165/200 (82%)
 Frame = -2

Query: 1712 YFYRLLSGPEPLSTFDKDRAWHVSEELDLLAMQKACKVLVGRHDFSSFRAAACQAKSPIR 1533
            YFYRLLSGPEP+S+F++DRAWHV E LDLLAMQKAC +L+GRHDFSSFRAAACQA SPIR
Sbjct: 185  YFYRLLSGPEPVSSFERDRAWHVPENLDLLAMQKACNILIGRHDFSSFRAAACQANSPIR 244

Query: 1532 TLDELNVTEVVSSLYFPSVVERERSNFVAECSSLGVVNSETKLSHVSAIADQVNDKDSWG 1353
            TLDELNV EVVS+ +FPS+ ER +S+ V E  ++  + S+T  S +S   ++   + S G
Sbjct: 245  TLDELNVIEVVSTPFFPSISERLKSSSVMEDPTV-YLGSDTNHSQISFNTNEGKLEGSNG 303

Query: 1352 EPSPVFGMRKQHRCFVVTARARSFLYHQVRLLVGVLKSVGTGELKVPDVEGILKAKTVSA 1173
            E    FG+R++HRCFVVTARARSFLYHQVRLLVGVLKSVG G+L  PDV+ IL+AK+++A
Sbjct: 304  EACQEFGLRRRHRCFVVTARARSFLYHQVRLLVGVLKSVGAGDLTDPDVKRILEAKSIAA 363

Query: 1172 ASPMAPACGLYLGHVKYDLP 1113
            A PMAPACGLYLGHVKYDLP
Sbjct: 364  APPMAPACGLYLGHVKYDLP 383



 Score =  252 bits (644), Expect = 3e-64
 Identities = 129/183 (70%), Positives = 147/183 (80%)
 Frame = -2

Query: 551 ADTSKQSLDKPPQDNSSERPKKIARVXXXXXXXXXXXXXXEQNQQKESVFSEMKMNTNPR 372
           ++T+K SLD+ P+  S +RP K+ +V                 +QKESV     MN NPR
Sbjct: 11  SETNKHSLDQRPE--SPQRPSKLPKVNDDGGNDVVEG-----EEQKESV--TRTMNPNPR 61

Query: 371 IQRYLIAIEYIGTRFSGAQQQSNARTVVGVLQDAFHKFIGQPVSIFCSSRTDAGVHALSN 192
           +QRYL+AIEYIGTRF+GAQQQ N RTVVGVLQ+AF KFIGQPVS+FCSSRTDAGVHALSN
Sbjct: 62  LQRYLLAIEYIGTRFAGAQQQPNCRTVVGVLQEAFQKFIGQPVSVFCSSRTDAGVHALSN 121

Query: 191 VCHVDVERISKRKPGELLPPHEPAVVKRAVNHFLQKNEGDIMVIDVRCVPSDFHSRYKAR 12
           VCHVDVERISKRKPG++LPPHEP VVKRAVNHFLQKN GDIMVIDVRCVP DFH+RYKA+
Sbjct: 122 VCHVDVERISKRKPGDVLPPHEPLVVKRAVNHFLQKNAGDIMVIDVRCVPDDFHARYKAQ 181

Query: 11  ERT 3
           ERT
Sbjct: 182 ERT 184


>ref|XP_006349329.1| PREDICTED: tRNA pseudouridine synthase-like 1-like [Solanum
            tuberosum]
          Length = 389

 Score =  271 bits (694), Expect = 5e-70
 Identities = 137/203 (67%), Positives = 165/203 (81%)
 Frame = -2

Query: 1712 YFYRLLSGPEPLSTFDKDRAWHVSEELDLLAMQKACKVLVGRHDFSSFRAAACQAKSPIR 1533
            YFYRLLSGPE +S+F++DRAWHV E LDLLAMQKAC +L+GRHDFSSFRAAACQA SPIR
Sbjct: 185  YFYRLLSGPESVSSFERDRAWHVPENLDLLAMQKACNILIGRHDFSSFRAAACQANSPIR 244

Query: 1532 TLDELNVTEVVSSLYFPSVVERERSNFVAECSSLGVVNSETKLSHVSAIADQVNDKDSWG 1353
            TLDELNV EVVS+ +FPS+ ER +S+ V E  ++  + S+T  S +S   ++   + S G
Sbjct: 245  TLDELNVIEVVSTPFFPSISERLKSSSVMEDPTVS-LGSDTNHSQISLNTNEEKLEGSNG 303

Query: 1352 EPSPVFGMRKQHRCFVVTARARSFLYHQVRLLVGVLKSVGTGELKVPDVEGILKAKTVSA 1173
            E    FG+R++HRCFVVTARARSFLYHQVRLLVGVLKSVG G L  PDV+ IL+AK+++A
Sbjct: 304  EACQEFGLRRRHRCFVVTARARSFLYHQVRLLVGVLKSVGAGVLTDPDVKRILEAKSITA 363

Query: 1172 ASPMAPACGLYLGHVKYDLPSKT 1104
            A PMAPACGLYLGHVKYDLP +T
Sbjct: 364  APPMAPACGLYLGHVKYDLPPET 386



 Score =  255 bits (651), Expect = 5e-65
 Identities = 132/193 (68%), Positives = 152/193 (78%)
 Frame = -2

Query: 581 MTSGHSLHSDADTSKQSLDKPPQDNSSERPKKIARVXXXXXXXXXXXXXXEQNQQKESVF 402
           M++  S    ++T+K SLD+ P+  S +RP K  +V                 +QKESV 
Sbjct: 1   MSNDQSQPLISETNKHSLDQRPE--SPQRPSKFPKVNDDAGNDVLEG-----EEQKESV- 52

Query: 401 SEMKMNTNPRIQRYLIAIEYIGTRFSGAQQQSNARTVVGVLQDAFHKFIGQPVSIFCSSR 222
               MN NPR+QRYLIAIEYIGTRF+GAQQQ N RTVVGVLQ+AF KF+GQPVS+FCSSR
Sbjct: 53  -TRTMNPNPRLQRYLIAIEYIGTRFAGAQQQPNCRTVVGVLQEAFQKFVGQPVSVFCSSR 111

Query: 221 TDAGVHALSNVCHVDVERISKRKPGELLPPHEPAVVKRAVNHFLQKNEGDIMVIDVRCVP 42
           TDAGVHALSNVCHVDVERISKRKPG++LPPHEP VVKRAVNHFLQKNEGDIMVIDVRCVP
Sbjct: 112 TDAGVHALSNVCHVDVERISKRKPGDVLPPHEPLVVKRAVNHFLQKNEGDIMVIDVRCVP 171

Query: 41  SDFHSRYKARERT 3
           +DFH+RYKA+ERT
Sbjct: 172 ADFHARYKAQERT 184


>gb|EMJ23285.1| hypothetical protein PRUPE_ppa007576m1g, partial [Prunus persica]
          Length = 234

 Score =  269 bits (688), Expect = 2e-69
 Identities = 143/201 (71%), Positives = 162/201 (80%), Gaps = 1/201 (0%)
 Frame = -2

Query: 1712 YFYRLLSGPEPLSTFDKDRAWHVSEELDLLAMQKACKVLVGRHDFSSFRAAACQAKSPIR 1533
            YFYRLLSG EPLSTF+KDRAWHV EEL+L AMQ+ACKVLVG HDFSSFRAA CQAKSPIR
Sbjct: 47   YFYRLLSGAEPLSTFEKDRAWHVPEELNLRAMQEACKVLVGHHDFSSFRAAGCQAKSPIR 106

Query: 1532 TLDELNVTEVVSSLYFPSVVERERSNFVAECSSLGVVNSETKLSHVSAIADQVNDKDSW- 1356
            TLDELNV+EVVS+  FPS++ER+++N + E    G   SET            +   S+ 
Sbjct: 107  TLDELNVSEVVSTPCFPSIMERKQNN-LGEDPHAGTNKSET------------DPPPSFN 153

Query: 1355 GEPSPVFGMRKQHRCFVVTARARSFLYHQVRLLVGVLKSVGTGELKVPDVEGILKAKTVS 1176
            G     FG+RK+HRCFVVTARAR+FLYHQVRLLVGVLK+VGTG+LKVPDVE IL AKTV+
Sbjct: 154  GGADLGFGLRKKHRCFVVTARARAFLYHQVRLLVGVLKAVGTGDLKVPDVERILNAKTVT 213

Query: 1175 AASPMAPACGLYLGHVKYDLP 1113
            AASPMAPACGLYLGHVKYDLP
Sbjct: 214  AASPMAPACGLYLGHVKYDLP 234



 Score = 86.3 bits (212), Expect = 4e-14
 Identities = 39/46 (84%), Positives = 44/46 (95%)
 Frame = -2

Query: 140 LPPHEPAVVKRAVNHFLQKNEGDIMVIDVRCVPSDFHSRYKARERT 3
           L PHEPAVVKRAVNHFLQKNEGD+MVIDVR VP++FH+RYKA+ERT
Sbjct: 1   LEPHEPAVVKRAVNHFLQKNEGDVMVIDVRSVPANFHARYKAQERT 46


>gb|ESW20555.1| hypothetical protein PHAVU_006G218900g [Phaseolus vulgaris]
          Length = 373

 Score =  268 bits (686), Expect = 4e-69
 Identities = 139/201 (69%), Positives = 161/201 (80%)
 Frame = -2

Query: 1712 YFYRLLSGPEPLSTFDKDRAWHVSEELDLLAMQKACKVLVGRHDFSSFRAAACQAKSPIR 1533
            YFYRLLSGPEPLSTF+KDRAWHVSEEL+L AMQ+AC+VLVG HDFSSFRAA CQAKSPIR
Sbjct: 175  YFYRLLSGPEPLSTFEKDRAWHVSEELNLPAMQEACRVLVGSHDFSSFRAAGCQAKSPIR 234

Query: 1532 TLDELNVTEVVSSLYFPSVVERERSNFVAECSSLGVVNSETKLSHVSAIADQVNDKDSWG 1353
            TLDELNV+EV+ SL+FPSV++RE  + V+        NSET +   S+      DK +  
Sbjct: 235  TLDELNVSEVIESLHFPSVMDREGHDKVSSDPRSYPSNSETDIPPSSS---PCIDKVTTS 291

Query: 1352 EPSPVFGMRKQHRCFVVTARARSFLYHQVRLLVGVLKSVGTGELKVPDVEGILKAKTVSA 1173
                 FG R++HRC VVTARARSFLYHQVRLLVGVLK+VGTG L +PDVE IL AK+V++
Sbjct: 292  SEDVGFGKRRRHRCLVVTARARSFLYHQVRLLVGVLKAVGTGNLTIPDVERILNAKSVTS 351

Query: 1172 ASPMAPACGLYLGHVKYDLPS 1110
            ASPMAPACGLYLG VKYDLP+
Sbjct: 352  ASPMAPACGLYLGEVKYDLPT 372



 Score =  213 bits (543), Expect = 2e-52
 Identities = 110/181 (60%), Positives = 135/181 (74%), Gaps = 2/181 (1%)
 Frame = -2

Query: 539 KQSLDKPPQDNSSERPKKIARVXXXXXXXXXXXXXXEQNQQKESVFSEMKMNTNPR--IQ 366
           K S+D    DN+  RP K++++               ++ ++E    E +M  NPR  IQ
Sbjct: 6   KHSVDLECSDNN--RPSKLSKIEHSTHIAH-------EDDEEEE---EKEMTQNPRNGIQ 53

Query: 365 RYLIAIEYIGTRFSGAQQQSNARTVVGVLQDAFHKFIGQPVSIFCSSRTDAGVHALSNVC 186
           RY +AIEYIGTRFSG+Q+Q   RTVVG L++AF KF+G PVS+ CSSRTDAGVHALSNVC
Sbjct: 54  RYFLAIEYIGTRFSGSQKQLTCRTVVGALEEAFAKFVGHPVSVSCSSRTDAGVHALSNVC 113

Query: 185 HVDVERISKRKPGELLPPHEPAVVKRAVNHFLQKNEGDIMVIDVRCVPSDFHSRYKARER 6
           HVD++R SKRKPGE+LPPHEPAVV RAVNHFLQK++ D+ VIDVRCVPSDFH+RYKA ER
Sbjct: 114 HVDIQRTSKRKPGEVLPPHEPAVVGRAVNHFLQKHDSDLTVIDVRCVPSDFHARYKALER 173

Query: 5   T 3
           T
Sbjct: 174 T 174


>gb|ESW20554.1| hypothetical protein PHAVU_006G218900g [Phaseolus vulgaris]
          Length = 372

 Score =  268 bits (686), Expect = 4e-69
 Identities = 139/201 (69%), Positives = 161/201 (80%)
 Frame = -2

Query: 1712 YFYRLLSGPEPLSTFDKDRAWHVSEELDLLAMQKACKVLVGRHDFSSFRAAACQAKSPIR 1533
            YFYRLLSGPEPLSTF+KDRAWHVSEEL+L AMQ+AC+VLVG HDFSSFRAA CQAKSPIR
Sbjct: 174  YFYRLLSGPEPLSTFEKDRAWHVSEELNLPAMQEACRVLVGSHDFSSFRAAGCQAKSPIR 233

Query: 1532 TLDELNVTEVVSSLYFPSVVERERSNFVAECSSLGVVNSETKLSHVSAIADQVNDKDSWG 1353
            TLDELNV+EV+ SL+FPSV++RE  + V+        NSET +   S+      DK +  
Sbjct: 234  TLDELNVSEVIESLHFPSVMDREGHDKVSSDPRSYPSNSETDIPPSSS---PCIDKVTTS 290

Query: 1352 EPSPVFGMRKQHRCFVVTARARSFLYHQVRLLVGVLKSVGTGELKVPDVEGILKAKTVSA 1173
                 FG R++HRC VVTARARSFLYHQVRLLVGVLK+VGTG L +PDVE IL AK+V++
Sbjct: 291  SEDVGFGKRRRHRCLVVTARARSFLYHQVRLLVGVLKAVGTGNLTIPDVERILNAKSVTS 350

Query: 1172 ASPMAPACGLYLGHVKYDLPS 1110
            ASPMAPACGLYLG VKYDLP+
Sbjct: 351  ASPMAPACGLYLGEVKYDLPT 371



 Score =  207 bits (526), Expect = 1e-50
 Identities = 109/181 (60%), Positives = 134/181 (74%), Gaps = 2/181 (1%)
 Frame = -2

Query: 539 KQSLDKPPQDNSSERPKKIARVXXXXXXXXXXXXXXEQNQQKESVFSEMKMNTNPR--IQ 366
           K S+D    DN+  RP K++++               ++ ++E    E +M  NPR  IQ
Sbjct: 6   KHSVDLECSDNN--RPSKLSKIEHSTHIAH-------EDDEEEE---EKEMTQNPRNGIQ 53

Query: 365 RYLIAIEYIGTRFSGAQQQSNARTVVGVLQDAFHKFIGQPVSIFCSSRTDAGVHALSNVC 186
           RY +AIEYIGTRFSG+Q+Q   RTVVG L++AF KF+G PVS+ CSSRTDAGVHALSNVC
Sbjct: 54  RYFLAIEYIGTRFSGSQKQLTCRTVVGALEEAFAKFVGHPVSVSCSSRTDAGVHALSNVC 113

Query: 185 HVDVERISKRKPGELLPPHEPAVVKRAVNHFLQKNEGDIMVIDVRCVPSDFHSRYKARER 6
           HVD++R SKRKPGE+LPPHEPAVV RAVNHFLQ ++ D+ VIDVRCVPSDFH+RYKA ER
Sbjct: 114 HVDIQRTSKRKPGEVLPPHEPAVVGRAVNHFLQ-HDSDLTVIDVRCVPSDFHARYKALER 172

Query: 5   T 3
           T
Sbjct: 173 T 173


>ref|XP_004309887.1| PREDICTED: tRNA pseudouridine synthase A-like [Fragaria vesca subsp.
            vesca]
          Length = 350

 Score =  266 bits (680), Expect = 2e-68
 Identities = 139/200 (69%), Positives = 157/200 (78%)
 Frame = -2

Query: 1712 YFYRLLSGPEPLSTFDKDRAWHVSEELDLLAMQKACKVLVGRHDFSSFRAAACQAKSPIR 1533
            YFYRLLSGPEPLSTF+KDRAWH+ EELD+LAMQ+ACK+LVG HDFSSFRAA CQAKSPIR
Sbjct: 164  YFYRLLSGPEPLSTFEKDRAWHIPEELDVLAMQEACKILVGHHDFSSFRAAGCQAKSPIR 223

Query: 1532 TLDELNVTEVVSSLYFPSVVERERSNFVAECSSLGVVNSETKLSHVSAIADQVNDKDSWG 1353
            TLDELNV+EVVSS  FP++ ER R N V +   +   N+     H S            G
Sbjct: 224  TLDELNVSEVVSSPNFPTIAERTR-NLVQK--DIQCTNNPEADCHSSFN----------G 270

Query: 1352 EPSPVFGMRKQHRCFVVTARARSFLYHQVRLLVGVLKSVGTGELKVPDVEGILKAKTVSA 1173
                 FG+RK+HRC VVTARAR+FLYHQVRLLVGVLK VGTG+LK+PDVE IL AKTV+A
Sbjct: 271  GTDQGFGLRKKHRCIVVTARARAFLYHQVRLLVGVLKCVGTGDLKIPDVERILNAKTVTA 330

Query: 1172 ASPMAPACGLYLGHVKYDLP 1113
            ASPMAPACGLYLGHV+YDLP
Sbjct: 331  ASPMAPACGLYLGHVRYDLP 350



 Score =  227 bits (579), Expect = 1e-56
 Identities = 119/183 (65%), Positives = 140/183 (76%)
 Frame = -2

Query: 551 ADTSKQSLDKPPQDNSSERPKKIARVXXXXXXXXXXXXXXEQNQQKESVFSEMKMNTNPR 372
           ++  K SL+   Q  S +RP KI++                +  + ES      M+    
Sbjct: 2   SENLKHSLESRSQ--SPKRPSKISKTTS-------------EEAEAES------MSKPQG 40

Query: 371 IQRYLIAIEYIGTRFSGAQQQSNARTVVGVLQDAFHKFIGQPVSIFCSSRTDAGVHALSN 192
           IQRYLIAIEYIGTRFSG+QQQSN RTVVGVL++AF KFIGQPVSIFCSSRTDAGVHALSN
Sbjct: 41  IQRYLIAIEYIGTRFSGSQQQSNCRTVVGVLEEAFRKFIGQPVSIFCSSRTDAGVHALSN 100

Query: 191 VCHVDVERISKRKPGELLPPHEPAVVKRAVNHFLQKNEGDIMVIDVRCVPSDFHSRYKAR 12
           VCHVD+ERISKRKPGE+LPPHEP VV+RAVNHFLQKNEGD+MV+DVR VP+DFH+R+KA+
Sbjct: 101 VCHVDIERISKRKPGEVLPPHEPIVVQRAVNHFLQKNEGDVMVVDVRSVPADFHARFKAQ 160

Query: 11  ERT 3
           ERT
Sbjct: 161 ERT 163


>ref|XP_002263416.1| PREDICTED: tRNA pseudouridine synthase A [Vitis vinifera]
            gi|297739525|emb|CBI29707.3| unnamed protein product
            [Vitis vinifera]
          Length = 380

 Score =  266 bits (680), Expect = 2e-68
 Identities = 137/200 (68%), Positives = 162/200 (81%)
 Frame = -2

Query: 1712 YFYRLLSGPEPLSTFDKDRAWHVSEELDLLAMQKACKVLVGRHDFSSFRAAACQAKSPIR 1533
            YFYRLLSGPEPLS+F+KDRAWHV E+LDLLAMQKAC+VLVG HDFSSFRAA CQAKSPIR
Sbjct: 184  YFYRLLSGPEPLSSFEKDRAWHVPEDLDLLAMQKACRVLVGCHDFSSFRAAGCQAKSPIR 243

Query: 1532 TLDELNVTEVVSSLYFPSVVERERSNFVAECSSLGVVNSETKLSHVSAIADQVNDKDSWG 1353
            TLDEL V+EV+ + YFPS+ ER ++NF  E       N+E   S  +A  D+++  +  G
Sbjct: 244  TLDELCVSEVLPTPYFPSITERAQNNFTEENPLACSNNAEVPDSPSTANHDRLDGFNGAG 303

Query: 1352 EPSPVFGMRKQHRCFVVTARARSFLYHQVRLLVGVLKSVGTGELKVPDVEGILKAKTVSA 1173
            +    FG+R++HRCF+VTARARSFLYHQVRLLVGV+K VGTG+L V DVE IL AKTV+A
Sbjct: 304  QG---FGVRRRHRCFLVTARARSFLYHQVRLLVGVIKCVGTGDLTVSDVERILNAKTVTA 360

Query: 1172 ASPMAPACGLYLGHVKYDLP 1113
            ASPMAPACGLYLG+V YDLP
Sbjct: 361  ASPMAPACGLYLGNVNYDLP 380



 Score =  251 bits (640), Expect = 9e-64
 Identities = 127/183 (69%), Positives = 146/183 (79%)
 Frame = -2

Query: 551 ADTSKQSLDKPPQDNSSERPKKIARVXXXXXXXXXXXXXXEQNQQKESVFSEMKMNTNPR 372
           +D+ K  L++  +  S +RP KIAR                  +Q++SV S+  M  NPR
Sbjct: 15  SDSPKHLLNR--RSESPQRPSKIARTDDLS-----------DGEQQDSVASKT-MTQNPR 60

Query: 371 IQRYLIAIEYIGTRFSGAQQQSNARTVVGVLQDAFHKFIGQPVSIFCSSRTDAGVHALSN 192
           +QRYL+A+EYIGTRFSG+QQQ N RTV G LQ+AFHKFIGQPVSIFCSSRTDAGVHALSN
Sbjct: 61  VQRYLVAVEYIGTRFSGSQQQLNCRTVAGALQEAFHKFIGQPVSIFCSSRTDAGVHALSN 120

Query: 191 VCHVDVERISKRKPGELLPPHEPAVVKRAVNHFLQKNEGDIMVIDVRCVPSDFHSRYKAR 12
           VCHVDVERISKRKPGE+LPPHEPAVV+RAVNHFLQKNEGD+MVIDVRCVP DFH+RYKAR
Sbjct: 121 VCHVDVERISKRKPGEVLPPHEPAVVRRAVNHFLQKNEGDVMVIDVRCVPPDFHARYKAR 180

Query: 11  ERT 3
           ERT
Sbjct: 181 ERT 183


>ref|XP_003540148.1| PREDICTED: tRNA pseudouridine synthase-like 1-like [Glycine max]
          Length = 369

 Score =  264 bits (675), Expect = 8e-68
 Identities = 139/205 (67%), Positives = 160/205 (78%), Gaps = 4/205 (1%)
 Frame = -2

Query: 1712 YFYRLLSGPEPLSTFDKDRAWHVSEELDLLAMQKACKVLVGRHDFSSFRAAACQAKSPIR 1533
            YFYRLLSGPEPLSTF+KDRAWHV EEL L AMQ+AC+VLVG HDFSSFRAA CQAKSPIR
Sbjct: 171  YFYRLLSGPEPLSTFEKDRAWHVPEELSLPAMQEACRVLVGCHDFSSFRAAGCQAKSPIR 230

Query: 1532 TLDELNVTEVVSSLYFPSVVERERSNFVA----ECSSLGVVNSETKLSHVSAIADQVNDK 1365
            TLDEL+V EV+ S YFPS+++RE+ N V+     CS+    N+ET    +  I++   DK
Sbjct: 231  TLDELSVNEVIESPYFPSLMDREQHNKVSGDLRSCSN----NTET---DIPPISNPSIDK 283

Query: 1364 DSWGEPSPVFGMRKQHRCFVVTARARSFLYHQVRLLVGVLKSVGTGELKVPDVEGILKAK 1185
                     FG R++HRC VVTARARSFLYHQVRLLVGVLK+ GTG L +PDVE IL AK
Sbjct: 284  VITSSQDAGFGKRRRHRCLVVTARARSFLYHQVRLLVGVLKAAGTGNLTIPDVERILNAK 343

Query: 1184 TVSAASPMAPACGLYLGHVKYDLPS 1110
            TV+AASPMAPACGLYLG VKYDLP+
Sbjct: 344  TVTAASPMAPACGLYLGEVKYDLPT 368



 Score =  218 bits (554), Expect = 8e-54
 Identities = 112/181 (61%), Positives = 139/181 (76%), Gaps = 2/181 (1%)
 Frame = -2

Query: 539 KQSLDKPPQDNSSERPKKIARVXXXXXXXXXXXXXXEQNQQKESVFSEMKMNTNPR--IQ 366
           K ++D    DNS  RP KI+++                ++++E       M+ NPR  IQ
Sbjct: 6   KHTVDLECSDNS--RPSKISKIEYPSDSDI--------DEEEEG------MSQNPRNGIQ 49

Query: 365 RYLIAIEYIGTRFSGAQQQSNARTVVGVLQDAFHKFIGQPVSIFCSSRTDAGVHALSNVC 186
           RYL+AIEYIGT FSG+Q+Q N RTVVG L++AF KF+GQPVS+ CSSRTDAGVHALSNVC
Sbjct: 50  RYLVAIEYIGTLFSGSQKQLNVRTVVGALEEAFSKFVGQPVSVSCSSRTDAGVHALSNVC 109

Query: 185 HVDVERISKRKPGELLPPHEPAVVKRAVNHFLQKNEGDIMVIDVRCVPSDFHSRYKARER 6
           HVD++RISKR+PGE+LPPHEPAVV RAVNHFLQK++ D+MVIDVRCVPSDFH+R+KA+ER
Sbjct: 110 HVDIQRISKRRPGEVLPPHEPAVVGRAVNHFLQKHDSDLMVIDVRCVPSDFHARFKAQER 169

Query: 5   T 3
           T
Sbjct: 170 T 170


>ref|NP_001242177.1| uncharacterized protein LOC100799818 [Glycine max]
            gi|255637177|gb|ACU18919.1| unknown [Glycine max]
          Length = 370

 Score =  262 bits (670), Expect = 3e-67
 Identities = 137/201 (68%), Positives = 157/201 (78%)
 Frame = -2

Query: 1712 YFYRLLSGPEPLSTFDKDRAWHVSEELDLLAMQKACKVLVGRHDFSSFRAAACQAKSPIR 1533
            YFYRLLSGPEPLSTF+KDRAWHV EEL L AMQ+AC+VLVG HDFSSFRAA CQAKSPIR
Sbjct: 172  YFYRLLSGPEPLSTFEKDRAWHVPEELSLPAMQEACRVLVGFHDFSSFRAAGCQAKSPIR 231

Query: 1532 TLDELNVTEVVSSLYFPSVVERERSNFVAECSSLGVVNSETKLSHVSAIADQVNDKDSWG 1353
            TLDEL+V EV+ S YFPS+++RE+ N V+        NSET +   S   +   DK    
Sbjct: 232  TLDELSVNEVIESPYFPSLMDREQHNKVSGDLRSCPNNSETDIPPTS---NPSIDKVMAS 288

Query: 1352 EPSPVFGMRKQHRCFVVTARARSFLYHQVRLLVGVLKSVGTGELKVPDVEGILKAKTVSA 1173
                 FG R++HRC VVTARAR+FLYHQVRLLVGVLK+VGTG L +PDVE IL A+TV+A
Sbjct: 289  SQDVGFGKRRRHRCLVVTARARAFLYHQVRLLVGVLKAVGTGNLTIPDVERILNARTVTA 348

Query: 1172 ASPMAPACGLYLGHVKYDLPS 1110
            ASPMAPACGLYLG VKYDLP+
Sbjct: 349  ASPMAPACGLYLGEVKYDLPT 369



 Score =  215 bits (547), Expect = 5e-53
 Identities = 110/180 (61%), Positives = 133/180 (73%), Gaps = 2/180 (1%)
 Frame = -2

Query: 539 KQSLDKPPQDNSSERPKKIARVXXXXXXXXXXXXXXEQNQQKESVFSEMKMNTNPR--IQ 366
           K ++D    DN+  RP KI+ +                      +  E +M  NPR  IQ
Sbjct: 6   KHTVDLECSDNNINRPSKISIIEYPID---------------SDIDEEEEMIKNPRNGIQ 50

Query: 365 RYLIAIEYIGTRFSGAQQQSNARTVVGVLQDAFHKFIGQPVSIFCSSRTDAGVHALSNVC 186
           RYL+AIEYIGTRFSG+Q+Q N RTVVGVL++AF KF+GQPVS+ CSSRT AGVHALSNVC
Sbjct: 51  RYLVAIEYIGTRFSGSQKQLNVRTVVGVLEEAFSKFVGQPVSVSCSSRTVAGVHALSNVC 110

Query: 185 HVDVERISKRKPGELLPPHEPAVVKRAVNHFLQKNEGDIMVIDVRCVPSDFHSRYKARER 6
           HVD++RISKR+PGE+L PHEPAVV RAVNHFLQK + D+MVIDVRCVPSDFH+R+KA+ER
Sbjct: 111 HVDIQRISKRRPGEVLTPHEPAVVGRAVNHFLQKQDSDLMVIDVRCVPSDFHARFKAQER 170


>ref|XP_004485453.1| PREDICTED: tRNA pseudouridine synthase A-like isoform X1 [Cicer
            arietinum]
          Length = 374

 Score =  258 bits (660), Expect = 4e-66
 Identities = 139/209 (66%), Positives = 158/209 (75%), Gaps = 8/209 (3%)
 Frame = -2

Query: 1712 YFYRLLSGPEPLSTFDKDRAWHVSEELDLLAMQKACKVLVGRHDFSSFRAAACQAKSPIR 1533
            YFYRLLSG EPLST +KDRAWHV EEL+L AMQ+AC+VLVG HDFSSFRAA CQAKSPIR
Sbjct: 177  YFYRLLSGSEPLSTLEKDRAWHVPEELNLPAMQEACRVLVGHHDFSSFRAAGCQAKSPIR 236

Query: 1532 TLDELNVTEVVSSLYFPSVVERERSNFVAE----CSS----LGVVNSETKLSHVSAIADQ 1377
            TLDEL+V EV+ S YFPSV++RER   VA+    C S    +  V+S  ++  V A  + 
Sbjct: 237  TLDELSVVEVIQSPYFPSVMDRERQIKVADDLHGCGSNAEAVIPVSSSARIDKVRASNEG 296

Query: 1376 VNDKDSWGEPSPVFGMRKQHRCFVVTARARSFLYHQVRLLVGVLKSVGTGELKVPDVEGI 1197
            V            FG R+ HRC VVTARAR+FLYHQVRLLVGVLK+VGTG L +PDVE I
Sbjct: 297  VG-----------FGKRRYHRCLVVTARARAFLYHQVRLLVGVLKAVGTGNLTIPDVERI 345

Query: 1196 LKAKTVSAASPMAPACGLYLGHVKYDLPS 1110
            L AKTV+AASPMAPACGLYLG VKYDLPS
Sbjct: 346  LNAKTVTAASPMAPACGLYLGEVKYDLPS 374



 Score =  225 bits (573), Expect = 5e-56
 Identities = 110/169 (65%), Positives = 132/169 (78%)
 Frame = -2

Query: 509 NSSERPKKIARVXXXXXXXXXXXXXXEQNQQKESVFSEMKMNTNPRIQRYLIAIEYIGTR 330
           + + RP KI+++                 +Q+E    +  MN + RIQRYL+AIEYIGT 
Sbjct: 15  SDNNRPSKISKIEYPNPSYH-------DGEQEEEEEQKEGMNQHRRIQRYLVAIEYIGTH 67

Query: 329 FSGAQQQSNARTVVGVLQDAFHKFIGQPVSIFCSSRTDAGVHALSNVCHVDVERISKRKP 150
           FSG+Q+Q   RTVVGVL++AF KF+GQPVS+ CSSRTDAGVHALSNVCHVD+ERISKRKP
Sbjct: 68  FSGSQKQLTDRTVVGVLEEAFCKFVGQPVSVICSSRTDAGVHALSNVCHVDIERISKRKP 127

Query: 149 GELLPPHEPAVVKRAVNHFLQKNEGDIMVIDVRCVPSDFHSRYKARERT 3
           GE+LPPHEP VV+RAVNHFLQK  GD+MVIDVRCVPSDFH+RYKA+ERT
Sbjct: 128 GEVLPPHEPVVVRRAVNHFLQKQNGDLMVIDVRCVPSDFHARYKAQERT 176


>ref|XP_002526453.1| pseudouridylate synthase, putative [Ricinus communis]
            gi|223534233|gb|EEF35948.1| pseudouridylate synthase,
            putative [Ricinus communis]
          Length = 372

 Score =  258 bits (660), Expect = 4e-66
 Identities = 134/201 (66%), Positives = 159/201 (79%), Gaps = 1/201 (0%)
 Frame = -2

Query: 1712 YFYRLLSGPEPLSTFDKDRAWHVSEELDLLAMQKACKVLVGRHDFSSFRAAACQAKSPIR 1533
            YFYR LSGPEPLSTF+KDRAWHV E+LD++AMQ+ACKVLVG HDFSSFRA+ CQAKSPIR
Sbjct: 176  YFYRFLSGPEPLSTFEKDRAWHVLEDLDIVAMQEACKVLVGHHDFSSFRASGCQAKSPIR 235

Query: 1532 TLDELNVTEVVSSLYFPSVVERERSNFVAECSSLGVVNSETKL-SHVSAIADQVNDKDSW 1356
            TL E++V+EV S+LYFPS+ ERE++    E S      ++  + SH +    +     S+
Sbjct: 236  TLAEISVSEVASTLYFPSITEREQNCENGENSCCKKFKTDLPMGSHSNTNVAE----SSF 291

Query: 1355 GEPSPVFGMRKQHRCFVVTARARSFLYHQVRLLVGVLKSVGTGELKVPDVEGILKAKTVS 1176
            GE    FG+R++HRCFVVTARARSFLYHQVRLLVGVLKSVG G+L   DVE IL AK+V+
Sbjct: 292  GETDLGFGIRRRHRCFVVTARARSFLYHQVRLLVGVLKSVGIGDLTTSDVERILSAKSVT 351

Query: 1175 AASPMAPACGLYLGHVKYDLP 1113
            AASPMAPA GLYLGHVKYDLP
Sbjct: 352  AASPMAPARGLYLGHVKYDLP 372



 Score =  228 bits (581), Expect = 6e-57
 Identities = 116/182 (63%), Positives = 139/182 (76%)
 Frame = -2

Query: 548 DTSKQSLDKPPQDNSSERPKKIARVXXXXXXXXXXXXXXEQNQQKESVFSEMKMNTNPRI 369
           +  K SLD      S  RP KI +                + + +ES F    M++NP++
Sbjct: 3   ENPKHSLDT----ESRNRPSKILKTQDFVDDNEEG-----EEELQESSFVAESMSSNPKL 53

Query: 368 QRYLIAIEYIGTRFSGAQQQSNARTVVGVLQDAFHKFIGQPVSIFCSSRTDAGVHALSNV 189
           QRYLIA+EYIGT+F+G+Q+Q N RTVVGVL++AF KFIGQ VS+  SSRTDAGVHALSNV
Sbjct: 54  QRYLIAVEYIGTKFAGSQKQLNGRTVVGVLEEAFCKFIGQQVSVSLSSRTDAGVHALSNV 113

Query: 188 CHVDVERISKRKPGELLPPHEPAVVKRAVNHFLQKNEGDIMVIDVRCVPSDFHSRYKARE 9
           CHVD+ERISKRKPGE+LPPHEPAVV+RAVNHFLQKNEGDIMV DVRCVPSDFH+R+KA+E
Sbjct: 114 CHVDIERISKRKPGEVLPPHEPAVVRRAVNHFLQKNEGDIMVTDVRCVPSDFHARFKAQE 173

Query: 8   RT 3
           RT
Sbjct: 174 RT 175


>gb|ABE79574.2| tRNA pseudouridine synthase [Medicago truncatula]
          Length = 361

 Score =  253 bits (645), Expect = 2e-64
 Identities = 137/203 (67%), Positives = 155/203 (76%), Gaps = 2/203 (0%)
 Frame = -2

Query: 1712 YFYRLLSGPEPLSTFDKDRAWHVSEELDLLAMQKACKVLVGRHDFSSFRAAACQAKSPIR 1533
            YFYRLLSGPE LSTF+KDRAWH+ EEL+L AMQ+ACKVLVG HDFSSFRA+ CQAKSPIR
Sbjct: 164  YFYRLLSGPETLSTFEKDRAWHIPEELNLPAMQEACKVLVGHHDFSSFRASGCQAKSPIR 223

Query: 1532 TLDELNVTEVVSSLYFPSVVERERSNFVAECSSLGVVNSETKLS-HVSAIADQVN-DKDS 1359
            +LDEL+V EV  S YFPSV++RE    V +       NSET +    SA  D+V+  K+ 
Sbjct: 224  SLDELSVVEVTRSPYFPSVMDRENPINVTDDLHCFHSNSETVIPLGSSARIDEVSASKED 283

Query: 1358 WGEPSPVFGMRKQHRCFVVTARARSFLYHQVRLLVGVLKSVGTGELKVPDVEGILKAKTV 1179
             G     FG R+ HRC VVTARAR+FLYHQVRLLVGVLK VGTG + V DVE IL AKTV
Sbjct: 284  VG-----FGKRRYHRCLVVTARARAFLYHQVRLLVGVLKDVGTGNITVTDVERILNAKTV 338

Query: 1178 SAASPMAPACGLYLGHVKYDLPS 1110
            +A SPMAPACGLYLG VKYDLPS
Sbjct: 339  TATSPMAPACGLYLGEVKYDLPS 361



 Score =  212 bits (539), Expect = 5e-52
 Identities = 103/146 (70%), Positives = 120/146 (82%), Gaps = 5/146 (3%)
 Frame = -2

Query: 425 NQQKESVFSEMKMNTNP-----RIQRYLIAIEYIGTRFSGAQQQSNARTVVGVLQDAFHK 261
           N  + S  S+++   N      +IQRYL+A+EYIGTRF G Q+Q   RTV GVL+DAF K
Sbjct: 18  NNNRPSKISKIEEEMNQHHHHRKIQRYLVAVEYIGTRFFGFQKQLTDRTVAGVLEDAFCK 77

Query: 260 FIGQPVSIFCSSRTDAGVHALSNVCHVDVERISKRKPGELLPPHEPAVVKRAVNHFLQKN 81
           F+GQPVS+ CSSRTDAGVHALSNVCHVD+ERISKRKPGE+L PHEPAVV+RAVNHFLQK 
Sbjct: 78  FVGQPVSVVCSSRTDAGVHALSNVCHVDIERISKRKPGEVLQPHEPAVVRRAVNHFLQKE 137

Query: 80  EGDIMVIDVRCVPSDFHSRYKARERT 3
            GD+ VIDVRCVPSDFH+RYKA+ERT
Sbjct: 138 NGDLAVIDVRCVPSDFHARYKAQERT 163


>gb|EOX97061.1| Pseudouridine synthase family protein isoform 3 [Theobroma cacao]
          Length = 373

 Score =  249 bits (635), Expect = 3e-63
 Identities = 131/200 (65%), Positives = 154/200 (77%)
 Frame = -2

Query: 1712 YFYRLLSGPEPLSTFDKDRAWHVSEELDLLAMQKACKVLVGRHDFSSFRAAACQAKSPIR 1533
            YFYRLLSG EPLSTF+K+RAWHV E+LDL AMQ+ACKVLVG HDFSSFRAA CQAKSPIR
Sbjct: 172  YFYRLLSGSEPLSTFEKERAWHVPEKLDLYAMQEACKVLVGHHDFSSFRAAGCQAKSPIR 231

Query: 1532 TLDELNVTEVVSSLYFPSVVERERSNFVAECSSLGVVNSETKLSHVSAIADQVNDKDSWG 1353
            TLDEL+V+E   + YFPS+ E++++N   E S       E  L  + + ++  ++  S G
Sbjct: 232  TLDELHVSEAPPTPYFPSISEKKQNNSSTEDSHACSREPEIDLP-IDSFSNSDDEVGSNG 290

Query: 1352 EPSPVFGMRKQHRCFVVTARARSFLYHQVRLLVGVLKSVGTGELKVPDVEGILKAKTVSA 1173
                 FG+R++H C+VVTARARSFLYHQVRLLVGVLK VGTGEL   DVE IL AKTV+A
Sbjct: 291  ITDLGFGIRRRHHCYVVTARARSFLYHQVRLLVGVLKCVGTGELTTSDVERILNAKTVTA 350

Query: 1172 ASPMAPACGLYLGHVKYDLP 1113
            ASPMAPA GLYLG VKYDLP
Sbjct: 351  ASPMAPAYGLYLGCVKYDLP 370



 Score =  235 bits (600), Expect = 4e-59
 Identities = 121/183 (66%), Positives = 142/183 (77%)
 Frame = -2

Query: 551 ADTSKQSLDKPPQDNSSERPKKIARVXXXXXXXXXXXXXXEQNQQKESVFSEMKMNTNPR 372
           ++  K SL   P+   S RP KI +                + ++++    E  M+ NPR
Sbjct: 2   SENPKHSLSTTPE---SSRPSKIPKTQDHSDQ---------EEEEEDKQQQESSMSKNPR 49

Query: 371 IQRYLIAIEYIGTRFSGAQQQSNARTVVGVLQDAFHKFIGQPVSIFCSSRTDAGVHALSN 192
           IQRYL+AIEYIGTRFSG+QQQ N RTVVGVL++AF KFIGQPVSIFCSSRTDAGVHALSN
Sbjct: 50  IQRYLVAIEYIGTRFSGSQQQPNCRTVVGVLEEAFLKFIGQPVSIFCSSRTDAGVHALSN 109

Query: 191 VCHVDVERISKRKPGELLPPHEPAVVKRAVNHFLQKNEGDIMVIDVRCVPSDFHSRYKAR 12
           VCHVDVERISKRKPGE+LPPHEP+VV+RAVNHFLQ +EGDI VIDVRCVP+DFH+RYKA+
Sbjct: 110 VCHVDVERISKRKPGEVLPPHEPSVVRRAVNHFLQ-SEGDITVIDVRCVPNDFHARYKAQ 168

Query: 11  ERT 3
           ERT
Sbjct: 169 ERT 171


>gb|EOX97059.1| Pseudouridine synthase family protein isoform 1 [Theobroma cacao]
          Length = 374

 Score =  249 bits (635), Expect = 3e-63
 Identities = 131/200 (65%), Positives = 154/200 (77%)
 Frame = -2

Query: 1712 YFYRLLSGPEPLSTFDKDRAWHVSEELDLLAMQKACKVLVGRHDFSSFRAAACQAKSPIR 1533
            YFYRLLSG EPLSTF+K+RAWHV E+LDL AMQ+ACKVLVG HDFSSFRAA CQAKSPIR
Sbjct: 173  YFYRLLSGSEPLSTFEKERAWHVPEKLDLYAMQEACKVLVGHHDFSSFRAAGCQAKSPIR 232

Query: 1532 TLDELNVTEVVSSLYFPSVVERERSNFVAECSSLGVVNSETKLSHVSAIADQVNDKDSWG 1353
            TLDEL+V+E   + YFPS+ E++++N   E S       E  L  + + ++  ++  S G
Sbjct: 233  TLDELHVSEAPPTPYFPSISEKKQNNSSTEDSHACSREPEIDLP-IDSFSNSDDEVGSNG 291

Query: 1352 EPSPVFGMRKQHRCFVVTARARSFLYHQVRLLVGVLKSVGTGELKVPDVEGILKAKTVSA 1173
                 FG+R++H C+VVTARARSFLYHQVRLLVGVLK VGTGEL   DVE IL AKTV+A
Sbjct: 292  ITDLGFGIRRRHHCYVVTARARSFLYHQVRLLVGVLKCVGTGELTTSDVERILNAKTVTA 351

Query: 1172 ASPMAPACGLYLGHVKYDLP 1113
            ASPMAPA GLYLG VKYDLP
Sbjct: 352  ASPMAPAYGLYLGCVKYDLP 371



 Score =  242 bits (617), Expect = 4e-61
 Identities = 122/183 (66%), Positives = 143/183 (78%)
 Frame = -2

Query: 551 ADTSKQSLDKPPQDNSSERPKKIARVXXXXXXXXXXXXXXEQNQQKESVFSEMKMNTNPR 372
           ++  K SL   P+   S RP KI +                + ++++    E  M+ NPR
Sbjct: 2   SENPKHSLSTTPE---SSRPSKIPKTQDHSDQ---------EEEEEDKQQQESSMSKNPR 49

Query: 371 IQRYLIAIEYIGTRFSGAQQQSNARTVVGVLQDAFHKFIGQPVSIFCSSRTDAGVHALSN 192
           IQRYL+AIEYIGTRFSG+QQQ N RTVVGVL++AF KFIGQPVSIFCSSRTDAGVHALSN
Sbjct: 50  IQRYLVAIEYIGTRFSGSQQQPNCRTVVGVLEEAFLKFIGQPVSIFCSSRTDAGVHALSN 109

Query: 191 VCHVDVERISKRKPGELLPPHEPAVVKRAVNHFLQKNEGDIMVIDVRCVPSDFHSRYKAR 12
           VCHVDVERISKRKPGE+LPPHEP+VV+RAVNHFLQK+EGDI VIDVRCVP+DFH+RYKA+
Sbjct: 110 VCHVDVERISKRKPGEVLPPHEPSVVRRAVNHFLQKSEGDITVIDVRCVPNDFHARYKAQ 169

Query: 11  ERT 3
           ERT
Sbjct: 170 ERT 172


>ref|XP_006389535.1| hypothetical protein POPTR_0022s00690g [Populus trichocarpa]
            gi|550312358|gb|ERP48449.1| hypothetical protein
            POPTR_0022s00690g [Populus trichocarpa]
          Length = 370

 Score =  248 bits (633), Expect = 6e-63
 Identities = 128/198 (64%), Positives = 156/198 (78%)
 Frame = -2

Query: 1712 YFYRLLSGPEPLSTFDKDRAWHVSEELDLLAMQKACKVLVGRHDFSSFRAAACQAKSPIR 1533
            YFYRLL GPE LSTF+KDRAWHVSEELDL++MQ+ACKVLVG HDFSSFRA+ CQAKSP R
Sbjct: 172  YFYRLLIGPELLSTFEKDRAWHVSEELDLVSMQEACKVLVGHHDFSSFRASGCQAKSPFR 231

Query: 1532 TLDELNVTEVVSSLYFPSVVERERSNFVAECSSLGVVNSETKLSHVSAIADQVNDKDSWG 1353
            TL+EL+V EVVS+ YFPS+ ERE+++   E         +T L    +I++      S  
Sbjct: 232  TLEELSVLEVVSTPYFPSITEREQNSSNGEGPHSFHNKCKTGLP-TGSISNGFMAGGSNS 290

Query: 1352 EPSPVFGMRKQHRCFVVTARARSFLYHQVRLLVGVLKSVGTGELKVPDVEGILKAKTVSA 1173
                 FG+R++HRC+V+TAR+RSFLYHQVRLLVGVLKSVGTG+L V DVE IL A++++A
Sbjct: 291  GTDLGFGIRRRHRCYVITARSRSFLYHQVRLLVGVLKSVGTGDLTVSDVERILNARSITA 350

Query: 1172 ASPMAPACGLYLGHVKYD 1119
            ASPMAPACGLYLGHVKY+
Sbjct: 351  ASPMAPACGLYLGHVKYE 368



 Score =  224 bits (572), Expect = 7e-56
 Identities = 113/172 (65%), Positives = 136/172 (79%)
 Frame = -2

Query: 518 PQDNSSERPKKIARVXXXXXXXXXXXXXXEQNQQKESVFSEMKMNTNPRIQRYLIAIEYI 339
           P+++ +ERP KI++                + ++KE+V   MK    P +QRYL+A+EYI
Sbjct: 10  PEESPNERPSKISKTLQEEGDSSE------EEEEKEAVDKSMK----PGLQRYLVAVEYI 59

Query: 338 GTRFSGAQQQSNARTVVGVLQDAFHKFIGQPVSIFCSSRTDAGVHALSNVCHVDVERISK 159
           GTRF G+QQQ N RTVVGVLQ+AFHKFIGQPV+I  SSRTDAGVHALSNVCHVDVERISK
Sbjct: 60  GTRFCGSQQQLNHRTVVGVLQEAFHKFIGQPVTICLSSRTDAGVHALSNVCHVDVERISK 119

Query: 158 RKPGELLPPHEPAVVKRAVNHFLQKNEGDIMVIDVRCVPSDFHSRYKARERT 3
           RKPGE+LPPHEPAVV++AVNHFLQK EGDIMV DVR VP+ FH+R+KA+ERT
Sbjct: 120 RKPGEVLPPHEPAVVRKAVNHFLQKKEGDIMVTDVRSVPAHFHARFKAQERT 171


>ref|XP_002331109.1| predicted protein [Populus trichocarpa]
          Length = 326

 Score =  248 bits (633), Expect = 6e-63
 Identities = 128/198 (64%), Positives = 156/198 (78%)
 Frame = -2

Query: 1712 YFYRLLSGPEPLSTFDKDRAWHVSEELDLLAMQKACKVLVGRHDFSSFRAAACQAKSPIR 1533
            YFYRLL GPE LSTF+KDRAWHVSEELDL++MQ+ACKVLVG HDFSSFRA+ CQAKSP R
Sbjct: 128  YFYRLLIGPELLSTFEKDRAWHVSEELDLVSMQEACKVLVGHHDFSSFRASGCQAKSPFR 187

Query: 1532 TLDELNVTEVVSSLYFPSVVERERSNFVAECSSLGVVNSETKLSHVSAIADQVNDKDSWG 1353
            TL+EL+V EVVS+ YFPS+ ERE+++   E         +T L    +I++      S  
Sbjct: 188  TLEELSVLEVVSTPYFPSITEREQNSSNGEGPHSFHNKCKTGLP-TGSISNGFMAGGSNS 246

Query: 1352 EPSPVFGMRKQHRCFVVTARARSFLYHQVRLLVGVLKSVGTGELKVPDVEGILKAKTVSA 1173
                 FG+R++HRC+V+TAR+RSFLYHQVRLLVGVLKSVGTG+L V DVE IL A++++A
Sbjct: 247  GTDLGFGIRRRHRCYVITARSRSFLYHQVRLLVGVLKSVGTGDLTVSDVERILNARSITA 306

Query: 1172 ASPMAPACGLYLGHVKYD 1119
            ASPMAPACGLYLGHVKY+
Sbjct: 307  ASPMAPACGLYLGHVKYE 324



 Score =  211 bits (536), Expect = 1e-51
 Identities = 101/125 (80%), Positives = 114/125 (91%)
 Frame = -2

Query: 377 PRIQRYLIAIEYIGTRFSGAQQQSNARTVVGVLQDAFHKFIGQPVSIFCSSRTDAGVHAL 198
           P +QRYL+A+EYIGTRF G+QQQ N RTVVGVLQ+AFHKFIGQPV+I  SSRTDAGVHAL
Sbjct: 3   PGLQRYLVAVEYIGTRFCGSQQQLNHRTVVGVLQEAFHKFIGQPVTICLSSRTDAGVHAL 62

Query: 197 SNVCHVDVERISKRKPGELLPPHEPAVVKRAVNHFLQKNEGDIMVIDVRCVPSDFHSRYK 18
           SNVCHVDVERISKRKPGE+LPPHEPAVV++AVNHFLQK EGDIMV DVR V + FH+R+K
Sbjct: 63  SNVCHVDVERISKRKPGEVLPPHEPAVVRKAVNHFLQKKEGDIMVTDVRSVSAHFHARFK 122

Query: 17  ARERT 3
           A+ERT
Sbjct: 123 AQERT 127


>ref|XP_006417534.1| hypothetical protein EUTSA_v10007981mg [Eutrema salsugineum]
           gi|557095305|gb|ESQ35887.1| hypothetical protein
           EUTSA_v10007981mg [Eutrema salsugineum]
          Length = 368

 Score =  244 bits (623), Expect = 8e-62
 Identities = 122/179 (68%), Positives = 139/179 (77%)
 Frame = -2

Query: 539 KQSLDKPPQDNSSERPKKIARVXXXXXXXXXXXXXXEQNQQKESVFSEMKMNTNPRIQRY 360
           K  LD      S ER  K+AR                Q      V SE +++ NPR+QRY
Sbjct: 6   KHPLDSSASQESLERLSKVARFDGFSDEEEGEEAEERQGL----VVSEPELSMNPRVQRY 61

Query: 359 LIAIEYIGTRFSGAQQQSNARTVVGVLQDAFHKFIGQPVSIFCSSRTDAGVHALSNVCHV 180
           L+AIEYIGTRFSG+QQQ+  RTVVGVLQ+AFHKFIGQPV IFCSSRTDAGVHALSNVCHV
Sbjct: 62  LVAIEYIGTRFSGSQQQATDRTVVGVLQEAFHKFIGQPVKIFCSSRTDAGVHALSNVCHV 121

Query: 179 DVERISKRKPGELLPPHEPAVVKRAVNHFLQKNEGDIMVIDVRCVPSDFHSRYKARERT 3
           DVERISKRKPGE+LPPHEP VV+RAVNHFLQ+N+GD+MVIDVRCVPS++H+RYKARERT
Sbjct: 122 DVERISKRKPGEVLPPHEPGVVQRAVNHFLQRNDGDVMVIDVRCVPSNYHARYKARERT 180



 Score =  239 bits (611), Expect = 2e-60
 Identities = 128/204 (62%), Positives = 148/204 (72%), Gaps = 4/204 (1%)
 Frame = -2

Query: 1712 YFYRLLSGPEPLSTFDKDRAWHVSEELDLLAMQKACKVLVGRHDFSSFRAAACQAKSPIR 1533
            YFYRLLSG +PLS  +KDRAWHV EELDL +MQ+AC+VLVG HDFSSFRAA CQAKSPIR
Sbjct: 181  YFYRLLSGSDPLSILEKDRAWHVPEELDLRSMQEACRVLVGTHDFSSFRAAGCQAKSPIR 240

Query: 1532 TLDELNVTEVVSSLYFPSVVERERSNF----VAECSSLGVVNSETKLSHVSAIADQVNDK 1365
            +LDELNVTEV S+ YFPS+ ER  S         CSS     ++T+ + VS         
Sbjct: 241  SLDELNVTEVPSTPYFPSITERTPSYLNNGDPLACSS----QAKTETAGVST-------- 288

Query: 1364 DSWGEPSPVFGMRKQHRCFVVTARARSFLYHQVRLLVGVLKSVGTGELKVPDVEGILKAK 1185
                +    FG+R++HRC+VVTAR R+FLYHQVRLLV  LK VGTGEL V DVE ILKAK
Sbjct: 289  ----DGGDTFGVRRRHRCYVVTARGRAFLYHQVRLLVAALKCVGTGELTVSDVERILKAK 344

Query: 1184 TVSAASPMAPACGLYLGHVKYDLP 1113
            TV+AA PMAPACGLYL  VKY+ P
Sbjct: 345  TVTAAKPMAPACGLYLARVKYEFP 368


>ref|XP_003592926.1| tRNA pseudouridine synthase A [Medicago truncatula]
            gi|355481974|gb|AES63177.1| tRNA pseudouridine synthase A
            [Medicago truncatula]
          Length = 375

 Score =  244 bits (622), Expect = 1e-61
 Identities = 136/217 (62%), Positives = 156/217 (71%), Gaps = 16/217 (7%)
 Frame = -2

Query: 1712 YFYRLLSGPEPLSTFDKDRAWHVSEELDL--------------LAMQKACKVLVGRHDFS 1575
            YFYRLLSGPE LSTF+KDRAWH+ EEL+L              ++MQ+ACKVLVG HDFS
Sbjct: 164  YFYRLLSGPETLSTFEKDRAWHIPEELNLPAMQTYHMRCESLMISMQEACKVLVGHHDFS 223

Query: 1574 SFRAAACQAKSPIRTLDELNVTEVVSSLYFPSVVERERSNFVAECSSLGVVNSETKLS-H 1398
            SFRA+ CQAKSPIR+LDEL+V EV  S YFPSV++RE    V +       NSET +   
Sbjct: 224  SFRASGCQAKSPIRSLDELSVVEVTRSPYFPSVMDRENPINVTDDLHCFHSNSETVIPLG 283

Query: 1397 VSAIADQVN-DKDSWGEPSPVFGMRKQHRCFVVTARARSFLYHQVRLLVGVLKSVGTGEL 1221
             SA  D+V+  K+  G     FG R+ HRC VVTARAR+FLYHQVRLLVGVLK VGTG +
Sbjct: 284  SSARIDEVSASKEDVG-----FGKRRYHRCLVVTARARAFLYHQVRLLVGVLKDVGTGNI 338

Query: 1220 KVPDVEGILKAKTVSAASPMAPACGLYLGHVKYDLPS 1110
             V DVE IL AKTV+A SPMAPACGLYLG VKYDLPS
Sbjct: 339  TVTDVERILNAKTVTATSPMAPACGLYLGEVKYDLPS 375



 Score =  212 bits (539), Expect = 5e-52
 Identities = 103/146 (70%), Positives = 120/146 (82%), Gaps = 5/146 (3%)
 Frame = -2

Query: 425 NQQKESVFSEMKMNTNP-----RIQRYLIAIEYIGTRFSGAQQQSNARTVVGVLQDAFHK 261
           N  + S  S+++   N      +IQRYL+A+EYIGTRF G Q+Q   RTV GVL+DAF K
Sbjct: 18  NNNRPSKISKIEEEMNQHHHHRKIQRYLVAVEYIGTRFFGFQKQLTDRTVAGVLEDAFCK 77

Query: 260 FIGQPVSIFCSSRTDAGVHALSNVCHVDVERISKRKPGELLPPHEPAVVKRAVNHFLQKN 81
           F+GQPVS+ CSSRTDAGVHALSNVCHVD+ERISKRKPGE+L PHEPAVV+RAVNHFLQK 
Sbjct: 78  FVGQPVSVVCSSRTDAGVHALSNVCHVDIERISKRKPGEVLQPHEPAVVRRAVNHFLQKE 137

Query: 80  EGDIMVIDVRCVPSDFHSRYKARERT 3
            GD+ VIDVRCVPSDFH+RYKA+ERT
Sbjct: 138 NGDLAVIDVRCVPSDFHARYKAQERT 163


>ref|XP_006471141.1| PREDICTED: tRNA pseudouridine synthase-like 1-like isoform X2 [Citrus
            sinensis]
          Length = 382

 Score =  243 bits (619), Expect = 2e-61
 Identities = 131/217 (60%), Positives = 152/217 (70%), Gaps = 3/217 (1%)
 Frame = -2

Query: 1712 YFYRLLSGPEPLSTFDKDRAWHVSEELDLLAMQKACKVLVGRHDFSSFRAAACQAKSPIR 1533
            YFYR+LSGPEPLS F+KDRAWHV+EELDL AMQ+ACKVLVG HDFSSFRA+ CQA SPIR
Sbjct: 179  YFYRILSGPEPLSVFEKDRAWHVTEELDLRAMQEACKVLVGCHDFSSFRASGCQANSPIR 238

Query: 1532 TLDELNVTEVVSSLYFPSVVERERSNFVAECSSLGVVNSETKLSHVSAIADQVNDKDSWG 1353
            TLDEL+V+EVVS+  FPS+                        +  S +   +++    G
Sbjct: 239  TLDELHVSEVVSTALFPSI------------------------NQDSPVLSSIDNSSKLG 274

Query: 1352 EP---SPVFGMRKQHRCFVVTARARSFLYHQVRLLVGVLKSVGTGELKVPDVEGILKAKT 1182
             P   S VFG+RK+HR + V ARARSFLYHQVRL+VGVLK+VGTGEL V DVE ILKAKT
Sbjct: 275  MPNGGSNVFGIRKKHRSYEVIARARSFLYHQVRLIVGVLKAVGTGELTVSDVERILKAKT 334

Query: 1181 VSAASPMAPACGLYLGHVKYDLPSKT*IRLQSSFVSC 1071
            V+AASPMAPACGL LG VKYDLP         S  +C
Sbjct: 335  VTAASPMAPACGLSLGFVKYDLPEDDQTDAAESLETC 371



 Score =  216 bits (551), Expect = 2e-53
 Identities = 105/129 (81%), Positives = 120/129 (93%)
 Frame = -2

Query: 389 MNTNPRIQRYLIAIEYIGTRFSGAQQQSNARTVVGVLQDAFHKFIGQPVSIFCSSRTDAG 210
           M+TN RIQRYLIA+EYIGTRFSG+Q+Q N RTVVGVL++AFHKFIGQPVSI  SSRTDAG
Sbjct: 51  MSTNKRIQRYLIAVEYIGTRFSGSQKQLNCRTVVGVLEEAFHKFIGQPVSISLSSRTDAG 110

Query: 209 VHALSNVCHVDVERISKRKPGELLPPHEPAVVKRAVNHFLQKNEGDIMVIDVRCVPSDFH 30
           VHA SNVCHVDVERISKRKPGE+LPPH+ +VV+RAVNHFLQ +EGDIMV DVRCVPSDFH
Sbjct: 111 VHAASNVCHVDVERISKRKPGEVLPPHDSSVVRRAVNHFLQ-SEGDIMVTDVRCVPSDFH 169

Query: 29  SRYKARERT 3
           +R++A+ERT
Sbjct: 170 ARFRAQERT 178


>ref|XP_006471140.1| PREDICTED: tRNA pseudouridine synthase-like 1-like isoform X1 [Citrus
            sinensis]
          Length = 383

 Score =  243 bits (619), Expect = 2e-61
 Identities = 131/217 (60%), Positives = 152/217 (70%), Gaps = 3/217 (1%)
 Frame = -2

Query: 1712 YFYRLLSGPEPLSTFDKDRAWHVSEELDLLAMQKACKVLVGRHDFSSFRAAACQAKSPIR 1533
            YFYR+LSGPEPLS F+KDRAWHV+EELDL AMQ+ACKVLVG HDFSSFRA+ CQA SPIR
Sbjct: 180  YFYRILSGPEPLSVFEKDRAWHVTEELDLRAMQEACKVLVGCHDFSSFRASGCQANSPIR 239

Query: 1532 TLDELNVTEVVSSLYFPSVVERERSNFVAECSSLGVVNSETKLSHVSAIADQVNDKDSWG 1353
            TLDEL+V+EVVS+  FPS+                        +  S +   +++    G
Sbjct: 240  TLDELHVSEVVSTALFPSI------------------------NQDSPVLSSIDNSSKLG 275

Query: 1352 EP---SPVFGMRKQHRCFVVTARARSFLYHQVRLLVGVLKSVGTGELKVPDVEGILKAKT 1182
             P   S VFG+RK+HR + V ARARSFLYHQVRL+VGVLK+VGTGEL V DVE ILKAKT
Sbjct: 276  MPNGGSNVFGIRKKHRSYEVIARARSFLYHQVRLIVGVLKAVGTGELTVSDVERILKAKT 335

Query: 1181 VSAASPMAPACGLYLGHVKYDLPSKT*IRLQSSFVSC 1071
            V+AASPMAPACGL LG VKYDLP         S  +C
Sbjct: 336  VTAASPMAPACGLSLGFVKYDLPEDDQTDAAESLETC 372



 Score =  223 bits (568), Expect = 2e-55
 Identities = 106/129 (82%), Positives = 121/129 (93%)
 Frame = -2

Query: 389 MNTNPRIQRYLIAIEYIGTRFSGAQQQSNARTVVGVLQDAFHKFIGQPVSIFCSSRTDAG 210
           M+TN RIQRYLIA+EYIGTRFSG+Q+Q N RTVVGVL++AFHKFIGQPVSI  SSRTDAG
Sbjct: 51  MSTNKRIQRYLIAVEYIGTRFSGSQKQLNCRTVVGVLEEAFHKFIGQPVSISLSSRTDAG 110

Query: 209 VHALSNVCHVDVERISKRKPGELLPPHEPAVVKRAVNHFLQKNEGDIMVIDVRCVPSDFH 30
           VHA SNVCHVDVERISKRKPGE+LPPH+ +VV+RAVNHFLQK+EGDIMV DVRCVPSDFH
Sbjct: 111 VHAASNVCHVDVERISKRKPGEVLPPHDSSVVRRAVNHFLQKSEGDIMVTDVRCVPSDFH 170

Query: 29  SRYKARERT 3
           +R++A+ERT
Sbjct: 171 ARFRAQERT 179