BLASTX nr result

ID: Catharanthus23_contig00016396 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00016396
         (1052 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631670.1| PREDICTED: uncharacterized protein LOC100854...    72   5e-10
ref|XP_004248753.1| PREDICTED: uncharacterized protein LOC101251...    61   2e-07
ref|XP_004248752.1| PREDICTED: uncharacterized protein LOC101251...    61   6e-07

>ref|XP_003631670.1| PREDICTED: uncharacterized protein LOC100854716 [Vitis vinifera]
            gi|147795291|emb|CAN64989.1| hypothetical protein
            VITISV_001771 [Vitis vinifera]
            gi|297741273|emb|CBI32404.3| unnamed protein product
            [Vitis vinifera]
          Length = 302

 Score = 71.6 bits (174), Expect = 5e-10
 Identities = 60/178 (33%), Positives = 83/178 (46%), Gaps = 16/178 (8%)
 Frame = -1

Query: 1013 YLNYLEMSFVKQLQSMGSLSWTSCQSDGRPSQKQFADFN----------RSSEQFTVPQD 864
            YL+ LE SFV QL S   L        GR S+ +  + N           SS+++TV QD
Sbjct: 67   YLDSLESSFVNQLHSSMGLF-------GRRSKVKMMELNSFQELAVNAYNSSDEYTVLQD 119

Query: 863  SEFPKLNIGK-----SCAADMAGSRKSPRT-HCLRQASKVSTAYSDIQECHEFHGKEKQL 702
              + K N G+       AA+     ++P   H      +     SD+        K   L
Sbjct: 120  GCWRKRNFGRHQLLSDAAAESRDILENPWICHFKSAGQQHDVTSSDLWNRSVDSSKGIHL 179

Query: 701  KGKKTCSCGSASYSERNYLCYSSCQNSVGSIREGTGQNFVDEDQEQNPSIVSRSKGQK 528
            +GK+  S G A+ S+R   C+   Q+SVG I E + QNF+DEDQE   S VSR+K  K
Sbjct: 180  RGKRKASHGLATSSKRLSACHPWLQDSVGGITEVSDQNFIDEDQENKSSRVSRAKKLK 237


>ref|XP_004248753.1| PREDICTED: uncharacterized protein LOC101251726 isoform 2 [Solanum
            lycopersicum]
          Length = 243

 Score = 61.2 bits (147), Expect(2) = 2e-07
 Identities = 56/165 (33%), Positives = 77/165 (46%), Gaps = 3/165 (1%)
 Frame = -1

Query: 1013 YLNYLEMSFVKQLQSMGSLSWTSCQSDGRPSQ---KQFADFNRSSEQFTVPQDSEFPKLN 843
            +L+ LE SFVKQL     L    C    R S+   K+  + + + +QFT  +D  + K+N
Sbjct: 64   FLDCLETSFVKQLHRSMILR-AGCVELNRSSRNLSKKLFNNDIAKKQFTAWRDKSW-KIN 121

Query: 842  IGKSCAADMAGSRKSPRTHCLRQASKVSTAYSDIQECHEFHGKEKQLKGKKTCSCGSASY 663
            I            +S +   L          +D+Q C     KEKQ + K+T S G    
Sbjct: 122  I------------ESDQPELLIGQGDEYHHVADLQLCSRLFTKEKQRRDKRTSSHGLEER 169

Query: 662  SERNYLCYSSCQNSVGSIREGTGQNFVDEDQEQNPSIVSRSKGQK 528
            S    L  +    +VG I EG+GQNFVDED E+N    SRSK  K
Sbjct: 170  SNLPLLIPAELLKTVGRIAEGSGQNFVDEDFEEN----SRSKKLK 210



 Score = 21.6 bits (44), Expect(2) = 2e-07
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -3

Query: 540 QRSKTAVGDTSSKVQIVP 487
           ++ KTA+ DT+   QIVP
Sbjct: 207 KKLKTAMTDTADNKQIVP 224


>ref|XP_004248752.1| PREDICTED: uncharacterized protein LOC101251726 isoform 1 [Solanum
            lycopersicum]
          Length = 274

 Score = 61.2 bits (147), Expect = 6e-07
 Identities = 56/165 (33%), Positives = 77/165 (46%), Gaps = 3/165 (1%)
 Frame = -1

Query: 1013 YLNYLEMSFVKQLQSMGSLSWTSCQSDGRPSQ---KQFADFNRSSEQFTVPQDSEFPKLN 843
            +L+ LE SFVKQL     L    C    R S+   K+  + + + +QFT  +D  + K+N
Sbjct: 64   FLDCLETSFVKQLHRSMILR-AGCVELNRSSRNLSKKLFNNDIAKKQFTAWRDKSW-KIN 121

Query: 842  IGKSCAADMAGSRKSPRTHCLRQASKVSTAYSDIQECHEFHGKEKQLKGKKTCSCGSASY 663
            I            +S +   L          +D+Q C     KEKQ + K+T S G    
Sbjct: 122  I------------ESDQPELLIGQGDEYHHVADLQLCSRLFTKEKQRRDKRTSSHGLEER 169

Query: 662  SERNYLCYSSCQNSVGSIREGTGQNFVDEDQEQNPSIVSRSKGQK 528
            S    L  +    +VG I EG+GQNFVDED E+N    SRSK  K
Sbjct: 170  SNLPLLIPAELLKTVGRIAEGSGQNFVDEDFEEN----SRSKKLK 210


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