BLASTX nr result
ID: Catharanthus23_contig00016380
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00016380
(458 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006356698.1| PREDICTED: E3 ubiquitin-protein ligase Topor... 120 2e-25
emb|CAN77823.1| hypothetical protein VITISV_043444 [Vitis vinifera] 119 4e-25
ref|XP_002276564.1| PREDICTED: E3 ubiquitin-protein ligase Topor... 118 9e-25
ref|XP_004169429.1| PREDICTED: E3 ubiquitin-protein ligase Topor... 114 2e-23
ref|XP_004143083.1| PREDICTED: E3 ubiquitin-protein ligase Topor... 114 2e-23
ref|XP_004241072.1| PREDICTED: E3 ubiquitin-protein ligase Topor... 112 5e-23
emb|CBI26097.3| unnamed protein product [Vitis vinifera] 110 1e-22
gb|EOY06439.1| RING/U-box superfamily protein, putative isoform ... 110 3e-22
gb|EMJ28142.1| hypothetical protein PRUPE_ppa014684mg [Prunus pe... 109 3e-22
ref|XP_004298112.1| PREDICTED: E3 ubiquitin-protein ligase Topor... 108 1e-21
gb|EOY06438.1| RING/U-box superfamily protein, putative isoform ... 107 1e-21
ref|XP_006419647.1| hypothetical protein CICLE_v10005542mg [Citr... 103 2e-20
ref|NP_850310.1| C3HC4 type zinc finger domain protein [Arabidop... 101 1e-19
gb|AAC79620.1| putative RING zinc finger protein [Arabidopsis th... 101 1e-19
ref|XP_006489137.1| PREDICTED: E3 ubiquitin-protein ligase Topor... 100 3e-19
ref|XP_002330333.1| predicted protein [Populus trichocarpa] gi|5... 100 3e-19
gb|EXB74839.1| E3 ubiquitin-protein ligase Topor [Morus notabilis] 99 6e-19
ref|XP_006295472.1| hypothetical protein CARUB_v10024575mg [Caps... 98 1e-18
ref|XP_006411134.1| hypothetical protein EUTSA_v10017000mg [Eutr... 93 4e-17
gb|EPS67027.1| hypothetical protein M569_07753 [Genlisea aurea] 82 7e-14
>ref|XP_006356698.1| PREDICTED: E3 ubiquitin-protein ligase Topors-like [Solanum
tuberosum]
Length = 272
Score = 120 bits (301), Expect = 2e-25
Identities = 57/107 (53%), Positives = 75/107 (70%)
Frame = +2
Query: 131 KLLAQSITGKSCSICLCRIEERRAAVVIPCNHAYCVECIRKWSNFKRNCPLCNSQFDSWF 310
K++ ++ KSC ICLCR+ R AAVVIPC HAYC+ CIR+WS+ KR CPLCN+ FDSWF
Sbjct: 6 KVITTAVARKSCPICLCRLHHRSAAVVIPCMHAYCIVCIRRWSDVKRKCPLCNADFDSWF 65
Query: 311 FRINLSSQTFHKEKLRAAPAKGASVSLSDVHSPRGRRLAEQLRLTRR 451
RI+ SS+TFHKE+L +A + + V S RLA++ +TRR
Sbjct: 66 SRISFSSRTFHKEQL-SARNETKKLHSGFVPSRLRDRLADRRAITRR 111
>emb|CAN77823.1| hypothetical protein VITISV_043444 [Vitis vinifera]
Length = 321
Score = 119 bits (298), Expect = 4e-25
Identities = 61/117 (52%), Positives = 79/117 (67%)
Frame = +2
Query: 74 SSSPRNGESERRFRRILTSKLLAQSITGKSCSICLCRIEERRAAVVIPCNHAYCVECIRK 253
SSS + S R R K++A +I GKSC ICL + +RRAAV+ C HAYC CIR+
Sbjct: 10 SSSSLSSSSSRMSRGKFVKKVMAPAIEGKSCPICLSHVVDRRAAVITACLHAYCFRCIRR 69
Query: 254 WSNFKRNCPLCNSQFDSWFFRINLSSQTFHKEKLRAAPAKGASVSLSDVHSPRGRRL 424
WS+ KR CPLCN+ FDS F+RI+LSSQTF KEKLR A+G +V+ ++ GRR+
Sbjct: 70 WSDLKRKCPLCNAHFDSLFYRISLSSQTFLKEKLRPL-AEGGTVNFGGGNA--GRRV 123
>ref|XP_002276564.1| PREDICTED: E3 ubiquitin-protein ligase Topors-like [Vitis vinifera]
Length = 294
Score = 118 bits (295), Expect = 9e-25
Identities = 61/120 (50%), Positives = 79/120 (65%)
Frame = +2
Query: 65 SPPSSSPRNGESERRFRRILTSKLLAQSITGKSCSICLCRIEERRAAVVIPCNHAYCVEC 244
S SS + S R R K++A +I GKSC ICL + +RRAAV+ C HAYC C
Sbjct: 9 SSSSSLSSSSSSSRMSRGKFVKKVMAPAIEGKSCPICLSHVVDRRAAVITACLHAYCFRC 68
Query: 245 IRKWSNFKRNCPLCNSQFDSWFFRINLSSQTFHKEKLRAAPAKGASVSLSDVHSPRGRRL 424
IR+WS+ KR CPLCN+ FDS F+RI+LSSQTF KEKLR A+G +V+ ++ GRR+
Sbjct: 69 IRRWSDLKRKCPLCNAHFDSLFYRISLSSQTFLKEKLRPL-AEGGTVNFGGGNA--GRRV 125
>ref|XP_004169429.1| PREDICTED: E3 ubiquitin-protein ligase Topors-like [Cucumis
sativus]
Length = 288
Score = 114 bits (284), Expect = 2e-23
Identities = 52/94 (55%), Positives = 68/94 (72%)
Frame = +2
Query: 74 SSSPRNGESERRFRRILTSKLLAQSITGKSCSICLCRIEERRAAVVIPCNHAYCVECIRK 253
SSS R + +T K+++ +I G++C ICL +E+R AAV+ C HAYC+ CIRK
Sbjct: 4 SSSTREPARKLNGENFIT-KVISPAICGETCPICLRELEDRTAAVLTTCIHAYCISCIRK 62
Query: 254 WSNFKRNCPLCNSQFDSWFFRINLSSQTFHKEKL 355
WSN KR CPLCN+QFDSWF +INLSSQ+F KE+L
Sbjct: 63 WSNLKRTCPLCNAQFDSWFTKINLSSQSFRKERL 96
>ref|XP_004143083.1| PREDICTED: E3 ubiquitin-protein ligase Topors-like [Cucumis
sativus]
Length = 288
Score = 114 bits (284), Expect = 2e-23
Identities = 52/94 (55%), Positives = 68/94 (72%)
Frame = +2
Query: 74 SSSPRNGESERRFRRILTSKLLAQSITGKSCSICLCRIEERRAAVVIPCNHAYCVECIRK 253
SSS R + +T K+++ +I G++C ICL +E+R AAV+ C HAYC+ CIRK
Sbjct: 4 SSSTREPARKLNGENFIT-KVISPAICGETCPICLRELEDRTAAVLTTCIHAYCISCIRK 62
Query: 254 WSNFKRNCPLCNSQFDSWFFRINLSSQTFHKEKL 355
WSN KR CPLCN+QFDSWF +INLSSQ+F KE+L
Sbjct: 63 WSNLKRTCPLCNAQFDSWFTKINLSSQSFRKERL 96
>ref|XP_004241072.1| PREDICTED: E3 ubiquitin-protein ligase Topors-like [Solanum
lycopersicum]
Length = 272
Score = 112 bits (280), Expect = 5e-23
Identities = 48/77 (62%), Positives = 60/77 (77%)
Frame = +2
Query: 131 KLLAQSITGKSCSICLCRIEERRAAVVIPCNHAYCVECIRKWSNFKRNCPLCNSQFDSWF 310
K +A ++ +SC ICLC+I R AAVVIPC HAYC+ CIR+WS+ KR CPLCN+ FDSWF
Sbjct: 6 KEIAAAVARQSCPICLCQIHHRSAAVVIPCMHAYCIVCIRRWSDVKRKCPLCNADFDSWF 65
Query: 311 FRINLSSQTFHKEKLRA 361
RI+ SS+TF KE+L A
Sbjct: 66 SRISFSSRTFQKEQLSA 82
>emb|CBI26097.3| unnamed protein product [Vitis vinifera]
Length = 308
Score = 110 bits (276), Expect = 1e-22
Identities = 54/96 (56%), Positives = 70/96 (72%)
Frame = +2
Query: 137 LAQSITGKSCSICLCRIEERRAAVVIPCNHAYCVECIRKWSNFKRNCPLCNSQFDSWFFR 316
+A +I GKSC ICL + +RRAAV+ C HAYC CIR+WS+ KR CPLCN+ FDS F+R
Sbjct: 1 MAPAIEGKSCPICLSHVVDRRAAVITACLHAYCFRCIRRWSDLKRKCPLCNAHFDSLFYR 60
Query: 317 INLSSQTFHKEKLRAAPAKGASVSLSDVHSPRGRRL 424
I+LSSQTF KEKLR A+G +V+ ++ GRR+
Sbjct: 61 ISLSSQTFLKEKLRPL-AEGGTVNFGGGNA--GRRV 93
>gb|EOY06439.1| RING/U-box superfamily protein, putative isoform 2 [Theobroma
cacao]
Length = 289
Score = 110 bits (274), Expect = 3e-22
Identities = 59/131 (45%), Positives = 87/131 (66%), Gaps = 2/131 (1%)
Frame = +2
Query: 71 PSSSPRNGES--ERRFRRILTSKLLAQSITGKSCSICLCRIEERRAAVVIPCNHAYCVEC 244
PSS+ R+ +S E+ RR+++ ++ GK+C ICL ++ R AAV+ C+HAYC+ C
Sbjct: 4 PSSAKRSEKSRIEKFVRRVISP-----AVVGKTCPICLRNLDVRGAAVLTVCSHAYCLGC 58
Query: 245 IRKWSNFKRNCPLCNSQFDSWFFRINLSSQTFHKEKLRAAPAKGASVSLSDVHSPRGRRL 424
IRKWS+ KR CPLCNS FDSWF++I+LSS+ F KE++ A ++G V +H PR L
Sbjct: 59 IRKWSDLKRKCPLCNSTFDSWFYKIDLSSRKFFKEQVPAL-SEGKPV----IHRPRS-TL 112
Query: 425 AEQLRLTRRCR 457
++ R+ R R
Sbjct: 113 IDRRRIIERTR 123
>gb|EMJ28142.1| hypothetical protein PRUPE_ppa014684mg [Prunus persica]
Length = 261
Score = 109 bits (273), Expect = 3e-22
Identities = 55/124 (44%), Positives = 74/124 (59%), Gaps = 3/124 (2%)
Frame = +2
Query: 77 SSPRNGESERRFRRILTSKLLAQSITGKSCSICLCRIEERRAAVVIPCNHAYCVECIRKW 256
+SPR R R L +++ + G++C ICL +E R AAV+ CNHAYCV CIRKW
Sbjct: 3 ASPRKPSERSRSREKLVGRVIWPATRGQNCPICLGALEPRSAAVLTSCNHAYCVRCIRKW 62
Query: 257 SNFKRNCPLCNSQFDSWFFRINLSSQTFHKEKLRAAPAKGASVSL---SDVHSPRGRRLA 427
S +R CPLCN+ FDSWF I+LSS++FH+E L +S S + H R R +
Sbjct: 63 SGLRRKCPLCNADFDSWFSYISLSSRSFHREILPPLDNTSSSRSFRLQQEEHPSRHVRNS 122
Query: 428 EQLR 439
E+ R
Sbjct: 123 ERRR 126
>ref|XP_004298112.1| PREDICTED: E3 ubiquitin-protein ligase Topors-like [Fragaria vesca
subsp. vesca]
Length = 282
Score = 108 bits (269), Expect = 1e-21
Identities = 55/132 (41%), Positives = 77/132 (58%), Gaps = 2/132 (1%)
Frame = +2
Query: 59 MESPPSSSP--RNGESERRFRRILTSKLLAQSITGKSCSICLCRIEERRAAVVIPCNHAY 232
MES +S P R+G E+ RR++ SI G++C ICL +E R AAV+ C HAY
Sbjct: 1 MESSTASPPGTRSGRREKLLRRVILP-----SIRGQNCPICLGSLEPRSAAVLEACKHAY 55
Query: 233 CVECIRKWSNFKRNCPLCNSQFDSWFFRINLSSQTFHKEKLRAAPAKGASVSLSDVHSPR 412
C+ CIRKWS +R CPLCNS F+SWF I+LSS++F +E L ++ +H
Sbjct: 56 CLRCIRKWSTLRRKCPLCNSIFESWFDTISLSSRSFRREILPPLNTNASATGTRSLHDAH 115
Query: 413 GRRLAEQLRLTR 448
R + + R +R
Sbjct: 116 PRNVMNERRRSR 127
>gb|EOY06438.1| RING/U-box superfamily protein, putative isoform 1 [Theobroma
cacao]
Length = 301
Score = 107 bits (268), Expect = 1e-21
Identities = 55/116 (47%), Positives = 80/116 (68%), Gaps = 2/116 (1%)
Frame = +2
Query: 71 PSSSPRNGES--ERRFRRILTSKLLAQSITGKSCSICLCRIEERRAAVVIPCNHAYCVEC 244
PSS+ R+ +S E+ RR+++ ++ GK+C ICL ++ R AAV+ C+HAYC+ C
Sbjct: 4 PSSAKRSEKSRIEKFVRRVISP-----AVVGKTCPICLRNLDVRGAAVLTVCSHAYCLGC 58
Query: 245 IRKWSNFKRNCPLCNSQFDSWFFRINLSSQTFHKEKLRAAPAKGASVSLSDVHSPR 412
IRKWS+ KR CPLCNS FDSWF++I+LSS+ F KE++ A ++G V +H PR
Sbjct: 59 IRKWSDLKRKCPLCNSTFDSWFYKIDLSSRKFFKEQVPAL-SEGKPV----IHRPR 109
>ref|XP_006419647.1| hypothetical protein CICLE_v10005542mg [Citrus clementina]
gi|557521520|gb|ESR32887.1| hypothetical protein
CICLE_v10005542mg [Citrus clementina]
Length = 294
Score = 103 bits (258), Expect = 2e-20
Identities = 49/102 (48%), Positives = 66/102 (64%)
Frame = +2
Query: 101 ERRFRRILTSKLLAQSITGKSCSICLCRIEERRAAVVIPCNHAYCVECIRKWSNFKRNCP 280
E+R R S++++ +I + C ICL + RR AV+ C HAYC+ECI KWSN KRNCP
Sbjct: 16 EKREREKFVSRVISPAIRWQKCPICLDNLTVRRTAVLKVCTHAYCLECIEKWSNLKRNCP 75
Query: 281 LCNSQFDSWFFRINLSSQTFHKEKLRAAPAKGASVSLSDVHS 406
LCN+ F SWF+RINLSS F +++L+ P +S HS
Sbjct: 76 LCNAPFRSWFYRINLSSSDFLQQQLQ--PLIKDKTFISQCHS 115
>ref|NP_850310.1| C3HC4 type zinc finger domain protein [Arabidopsis thaliana]
gi|17473924|gb|AAL38373.1| putative RING zinc finger
protein [Arabidopsis thaliana]
gi|20148385|gb|AAM10083.1| putative RING zinc finger
protein [Arabidopsis thaliana]
gi|330254541|gb|AEC09635.1| C3HC4 type zinc finger
domain protein [Arabidopsis thaliana]
Length = 296
Score = 101 bits (251), Expect = 1e-19
Identities = 50/98 (51%), Positives = 67/98 (68%), Gaps = 3/98 (3%)
Frame = +2
Query: 71 PSSSP--RNGESERRFRRILTSKLLAQSITGKSCSICLCRIEERRAAVVIP-CNHAYCVE 241
PSSS R+ ES +F + + ++ GKSC ICL + ERR+A VI C H YC+
Sbjct: 10 PSSSRHLRSPESIAKF----AGRAIFPALQGKSCPICLENLTERRSAAVITVCKHGYCLA 65
Query: 242 CIRKWSNFKRNCPLCNSQFDSWFFRINLSSQTFHKEKL 355
CIRKWS+FKRNCPLCN++FDSWF + +S+ +HKE+L
Sbjct: 66 CIRKWSSFKRNCPLCNTRFDSWFIVSDFASRKYHKEQL 103
>gb|AAC79620.1| putative RING zinc finger protein [Arabidopsis thaliana]
Length = 270
Score = 101 bits (251), Expect = 1e-19
Identities = 50/98 (51%), Positives = 67/98 (68%), Gaps = 3/98 (3%)
Frame = +2
Query: 71 PSSSP--RNGESERRFRRILTSKLLAQSITGKSCSICLCRIEERRAAVVIP-CNHAYCVE 241
PSSS R+ ES +F + + ++ GKSC ICL + ERR+A VI C H YC+
Sbjct: 10 PSSSRHLRSPESIAKF----AGRAIFPALQGKSCPICLENLTERRSAAVITVCKHGYCLA 65
Query: 242 CIRKWSNFKRNCPLCNSQFDSWFFRINLSSQTFHKEKL 355
CIRKWS+FKRNCPLCN++FDSWF + +S+ +HKE+L
Sbjct: 66 CIRKWSSFKRNCPLCNTRFDSWFIVSDFASRKYHKEQL 103
>ref|XP_006489137.1| PREDICTED: E3 ubiquitin-protein ligase Topors-like [Citrus
sinensis]
Length = 294
Score = 100 bits (248), Expect = 3e-19
Identities = 44/86 (51%), Positives = 60/86 (69%)
Frame = +2
Query: 101 ERRFRRILTSKLLAQSITGKSCSICLCRIEERRAAVVIPCNHAYCVECIRKWSNFKRNCP 280
E+R R S++++ +I + C ICL + RR AV+ C HAYC+ECI KWSN KR CP
Sbjct: 16 EKREREKFVSRVISPAIRWQKCPICLDNLTVRRTAVLKVCTHAYCLECIEKWSNLKRICP 75
Query: 281 LCNSQFDSWFFRINLSSQTFHKEKLR 358
LCN+ F SWF+RINLSS F +++L+
Sbjct: 76 LCNAPFRSWFYRINLSSSDFLQQQLQ 101
>ref|XP_002330333.1| predicted protein [Populus trichocarpa]
gi|566185432|ref|XP_006380195.1| zinc finger family
protein [Populus trichocarpa]
gi|550333716|gb|ERP57992.1| zinc finger family protein
[Populus trichocarpa]
Length = 289
Score = 99.8 bits (247), Expect = 3e-19
Identities = 56/124 (45%), Positives = 77/124 (62%), Gaps = 4/124 (3%)
Frame = +2
Query: 59 MESPPSSSPRNGESERRFRRILTSKLLAQSITGKSCSICLCRI----EERRAAVVIPCNH 226
MES SSS + S+R+ + SK++ +I G+SC +CL + RR AV+ C H
Sbjct: 1 MES--SSSIASRRSKRQSQEKFLSKVILPAIRGQSCPVCLKDFGGEEDYRRVAVIRVCLH 58
Query: 227 AYCVECIRKWSNFKRNCPLCNSQFDSWFFRINLSSQTFHKEKLRAAPAKGASVSLSDVHS 406
AYC++CIRKWS+ KR CPLCNS+F+SWF RI LS++ F EKL + V+ D+ S
Sbjct: 59 AYCLDCIRKWSDIKRKCPLCNSEFNSWFCRIILSTRNFSTEKLPVV-RESRRVTPLDILS 117
Query: 407 PRGR 418
R R
Sbjct: 118 SRQR 121
>gb|EXB74839.1| E3 ubiquitin-protein ligase Topor [Morus notabilis]
Length = 317
Score = 99.0 bits (245), Expect = 6e-19
Identities = 45/99 (45%), Positives = 61/99 (61%)
Frame = +2
Query: 131 KLLAQSITGKSCSICLCRIEERRAAVVIPCNHAYCVECIRKWSNFKRNCPLCNSQFDSWF 310
++++ +I G+ C ICL + R +AV+ CNHAYC CIRKWS F+R CPLCNS FDSWF
Sbjct: 20 RIISPAIRGQYCPICLEYLHGRTSAVLTACNHAYCEHCIRKWSFFRRKCPLCNSDFDSWF 79
Query: 311 FRINLSSQTFHKEKLRAAPAKGASVSLSDVHSPRGRRLA 427
RI+ SS FH+ +L + + R RR+A
Sbjct: 80 SRISFSSGKFHRHRLPPLETTSSRNFRFEEEEERPRRIA 118
>ref|XP_006295472.1| hypothetical protein CARUB_v10024575mg [Capsella rubella]
gi|482564180|gb|EOA28370.1| hypothetical protein
CARUB_v10024575mg [Capsella rubella]
Length = 276
Score = 98.2 bits (243), Expect = 1e-18
Identities = 43/74 (58%), Positives = 54/74 (72%), Gaps = 1/74 (1%)
Frame = +2
Query: 137 LAQSITGKSCSICLCRIEERRAAVVIP-CNHAYCVECIRKWSNFKRNCPLCNSQFDSWFF 313
L ++ GKSC IC + +RRAA VI C+H YC+ CIRKWS FKRNCPLCN+ FDSWF
Sbjct: 12 LFTALRGKSCPICFENLTDRRAAAVITACSHGYCLSCIRKWSGFKRNCPLCNTSFDSWFI 71
Query: 314 RINLSSQTFHKEKL 355
+L+S+ +HKE L
Sbjct: 72 VSDLASRKYHKEYL 85
>ref|XP_006411134.1| hypothetical protein EUTSA_v10017000mg [Eutrema salsugineum]
gi|557112303|gb|ESQ52587.1| hypothetical protein
EUTSA_v10017000mg [Eutrema salsugineum]
Length = 300
Score = 92.8 bits (229), Expect = 4e-17
Identities = 43/97 (44%), Positives = 60/97 (61%), Gaps = 4/97 (4%)
Frame = +2
Query: 77 SSPRNGESERRFRRILTSK----LLAQSITGKSCSICLCRIEERRAAVVIPCNHAYCVEC 244
S+ G S R +L K + ++ G+SC ICL + RRAAV+ C H YC+ C
Sbjct: 11 SNDEEGTSFTASRSLLILKQAIIAIVAALRGRSCPICLENLTGRRAAVITTCKHGYCLAC 70
Query: 245 IRKWSNFKRNCPLCNSQFDSWFFRINLSSQTFHKEKL 355
IRKWS+ KR+CPLCN+ FDSWF +L+ + + KE+L
Sbjct: 71 IRKWSSIKRSCPLCNTNFDSWFIVSDLALRKYRKEQL 107
>gb|EPS67027.1| hypothetical protein M569_07753 [Genlisea aurea]
Length = 258
Score = 82.0 bits (201), Expect = 7e-14
Identities = 46/111 (41%), Positives = 65/111 (58%), Gaps = 4/111 (3%)
Frame = +2
Query: 137 LAQSITGKSCSICLCRIEERRAAVVIPCNHAYCVECIRKWSNFKRNCPLCNSQFDSWFFR 316
+A S+ GK C ICL +E R +V++PC HAYCV CIR+WS+ K NCPLCN F SW+
Sbjct: 1 MAGSLGGKRCPICLGGLETRSPSVILPCGHAYCVGCIRRWSDVKCNCPLCNYDFRSWW-- 58
Query: 317 INLSSQTFHKEKLRAAP----AKGASVSLSDVHSPRGRRLAEQLRLTRRCR 457
+ SS + +E+ A+P K S ++ R + E+ R+ RR R
Sbjct: 59 LCRSSVGYGEEE--ASPIGRSQKNGSRRRDELLRRRRYQSYERRRIVRRSR 107