BLASTX nr result
ID: Catharanthus23_contig00016301
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00016301
(420 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006338794.1| PREDICTED: uncharacterized protein LOC102581... 82 7e-14
ref|XP_004233703.1| PREDICTED: uncharacterized protein LOC101251... 77 2e-12
emb|CAN69243.1| hypothetical protein VITISV_038879 [Vitis vinifera] 77 2e-12
ref|XP_002273685.2| PREDICTED: uncharacterized protein LOC100245... 77 3e-12
emb|CBI34887.3| unnamed protein product [Vitis vinifera] 77 3e-12
emb|CAN83549.1| hypothetical protein VITISV_001171 [Vitis vinifera] 77 3e-12
gb|EMJ17298.1| hypothetical protein PRUPE_ppa018570mg, partial [... 74 3e-11
ref|XP_002298526.2| hypothetical protein POPTR_0001s35040g [Popu... 73 3e-11
ref|XP_002524665.1| pentatricopeptide repeat-containing protein,... 69 5e-10
ref|XP_006470278.1| PREDICTED: probable ATP-dependent DNA helica... 64 3e-08
ref|XP_006446556.1| hypothetical protein CICLE_v10017496mg, part... 60 2e-07
ref|XP_004142851.1| PREDICTED: probable ATP-dependent DNA helica... 59 5e-07
gb|EOY02467.1| ATP binding,ATP-dependent helicases,DNA helicases... 58 1e-06
gb|EXC20319.1| putative ATP-dependent DNA helicase HFM1 [Morus n... 57 2e-06
ref|NP_189410.2| DNA helicase [Arabidopsis thaliana] gi|60172796... 56 4e-06
dbj|BAB02697.1| helicase-like protein [Arabidopsis thaliana] 56 4e-06
gb|ESW12968.1| hypothetical protein PHAVU_008G156500g [Phaseolus... 55 7e-06
gb|ESW12967.1| hypothetical protein PHAVU_008G156500g [Phaseolus... 55 7e-06
gb|ESW12966.1| hypothetical protein PHAVU_008G156500g [Phaseolus... 55 7e-06
gb|ESW12965.1| hypothetical protein PHAVU_008G156500g [Phaseolus... 55 7e-06
>ref|XP_006338794.1| PREDICTED: uncharacterized protein LOC102581133 [Solanum tuberosum]
Length = 1891
Score = 82.0 bits (201), Expect = 7e-14
Identities = 45/95 (47%), Positives = 60/95 (63%), Gaps = 13/95 (13%)
Frame = -2
Query: 272 EDDDCKIITEKTVFNHIKEKAKSLPALTPFRNTCSPSSETLSLIKKRTHERQLGIDSV-- 99
EDD+C+II E TVF+HI+EKAK+LPALT + TC PS ETL+LI+KRT E QL +++
Sbjct: 1606 EDDECRIINENTVFDHIREKAKNLPALTSLKGTCLPSLETLNLIRKRTREEQLLVENAVG 1665
Query: 98 -----------KENPVLQSAQPVVPESCKLASDSD 27
N V+QSAQ + E + S+ D
Sbjct: 1666 VSEEVRRTKVPYHNMVIQSAQYIDLEENRPFSNKD 1700
>ref|XP_004233703.1| PREDICTED: uncharacterized protein LOC101251951 [Solanum
lycopersicum]
Length = 1933
Score = 77.0 bits (188), Expect = 2e-12
Identities = 43/97 (44%), Positives = 61/97 (62%), Gaps = 13/97 (13%)
Frame = -2
Query: 272 EDDDCKIITEKTVFNHIKEKAKSLPALTPFRNTCSPSSETLSLIKKRTHERQLGIDSVK- 96
EDD+C+II E T+F+HI+EKAK+LPALT + T PS ETL+LI+KRT E+QL +++
Sbjct: 1648 EDDECRIINENTIFDHIREKAKNLPALTSLKGTRLPSLETLNLIRKRTREKQLLLENAVG 1707
Query: 95 ------------ENPVLQSAQPVVPESCKLASDSDLI 21
N V+QSA+ + E + S+ D I
Sbjct: 1708 VSEELRRTKVPCHNMVIQSAEYIDLEENRPFSNKDQI 1744
>emb|CAN69243.1| hypothetical protein VITISV_038879 [Vitis vinifera]
Length = 322
Score = 77.0 bits (188), Expect = 2e-12
Identities = 36/62 (58%), Positives = 48/62 (77%)
Frame = -2
Query: 299 NEDAPAVKDEDDDCKIITEKTVFNHIKEKAKSLPALTPFRNTCSPSSETLSLIKKRTHER 120
+E +PA++ EDD+CKIITE+TVF HI++K+KS LT + SPSSE L L +KRTHE+
Sbjct: 19 SEGSPAIETEDDECKIITEQTVFEHIRKKSKSFNVLTKSNASVSPSSEALILTRKRTHEQ 78
Query: 119 QL 114
QL
Sbjct: 79 QL 80
>ref|XP_002273685.2| PREDICTED: uncharacterized protein LOC100245824 [Vitis vinifera]
Length = 1984
Score = 76.6 bits (187), Expect = 3e-12
Identities = 36/61 (59%), Positives = 47/61 (77%)
Frame = -2
Query: 296 EDAPAVKDEDDDCKIITEKTVFNHIKEKAKSLPALTPFRNTCSPSSETLSLIKKRTHERQ 117
E +PA++ EDD+CKIITE+TVF HI++K+KS LT + SPSSE L L +KRTHE+Q
Sbjct: 1665 EGSPAIETEDDECKIITEQTVFEHIRKKSKSFNVLTKSNASVSPSSEALILTRKRTHEQQ 1724
Query: 116 L 114
L
Sbjct: 1725 L 1725
>emb|CBI34887.3| unnamed protein product [Vitis vinifera]
Length = 1270
Score = 76.6 bits (187), Expect = 3e-12
Identities = 36/61 (59%), Positives = 47/61 (77%)
Frame = -2
Query: 296 EDAPAVKDEDDDCKIITEKTVFNHIKEKAKSLPALTPFRNTCSPSSETLSLIKKRTHERQ 117
E +PA++ EDD+CKIITE+TVF HI++K+KS LT + SPSSE L L +KRTHE+Q
Sbjct: 920 EGSPAIETEDDECKIITEQTVFEHIRKKSKSFNVLTKSNASVSPSSEALILTRKRTHEQQ 979
Query: 116 L 114
L
Sbjct: 980 L 980
>emb|CAN83549.1| hypothetical protein VITISV_001171 [Vitis vinifera]
Length = 1131
Score = 76.6 bits (187), Expect = 3e-12
Identities = 36/61 (59%), Positives = 47/61 (77%)
Frame = -2
Query: 296 EDAPAVKDEDDDCKIITEKTVFNHIKEKAKSLPALTPFRNTCSPSSETLSLIKKRTHERQ 117
E +PA++ EDD+CKIITE+TVF HI++K+KS LT + SPSSE L L +KRTHE+Q
Sbjct: 812 EGSPAIETEDDECKIITEQTVFEHIRKKSKSFNVLTKSNASVSPSSEALILTRKRTHEQQ 871
Query: 116 L 114
L
Sbjct: 872 L 872
>gb|EMJ17298.1| hypothetical protein PRUPE_ppa018570mg, partial [Prunus persica]
Length = 1214
Score = 73.6 bits (179), Expect = 3e-11
Identities = 35/62 (56%), Positives = 44/62 (70%)
Frame = -2
Query: 299 NEDAPAVKDEDDDCKIITEKTVFNHIKEKAKSLPALTPFRNTCSPSSETLSLIKKRTHER 120
+ED A K ED +CKIIT++TVF+HI+EKAK+ P L CSPSSE L L +KR E+
Sbjct: 930 HEDEIAAKAEDSECKIITQQTVFDHIREKAKNFPVLAASNAVCSPSSERLVLTRKRAREK 989
Query: 119 QL 114
QL
Sbjct: 990 QL 991
>ref|XP_002298526.2| hypothetical protein POPTR_0001s35040g [Populus trichocarpa]
gi|550348915|gb|EEE83331.2| hypothetical protein
POPTR_0001s35040g [Populus trichocarpa]
Length = 1175
Score = 73.2 bits (178), Expect = 3e-11
Identities = 32/66 (48%), Positives = 46/66 (69%)
Frame = -2
Query: 299 NEDAPAVKDEDDDCKIITEKTVFNHIKEKAKSLPALTPFRNTCSPSSETLSLIKKRTHER 120
N P + +DD CKII+E+T+F HI+EKAK+ P LT N CSPSSE + L +KR+ ++
Sbjct: 855 NSMQPGFEIQDDSCKIISEQTIFEHIREKAKNFPLLTSSSNVCSPSSEAMLLTRKRSRDK 914
Query: 119 QLGIDS 102
+ +DS
Sbjct: 915 AIELDS 920
>ref|XP_002524665.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223536026|gb|EEF37684.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 2000
Score = 69.3 bits (168), Expect = 5e-10
Identities = 32/64 (50%), Positives = 43/64 (67%)
Frame = -2
Query: 296 EDAPAVKDEDDDCKIITEKTVFNHIKEKAKSLPALTPFRNTCSPSSETLSLIKKRTHERQ 117
E APAV+ E D+ KI++E+ +F+HI+EKAK+ P TP R CSPS ET +K HE
Sbjct: 1666 EGAPAVEREKDNSKIVSEQEIFDHIREKAKNFPNFTPSRTACSPSLETHLFTRKHRHEND 1725
Query: 116 LGID 105
L +D
Sbjct: 1726 LMLD 1729
>ref|XP_006470278.1| PREDICTED: probable ATP-dependent DNA helicase HFM1-like [Citrus
sinensis]
Length = 1228
Score = 63.5 bits (153), Expect = 3e-08
Identities = 33/70 (47%), Positives = 43/70 (61%)
Frame = -2
Query: 296 EDAPAVKDEDDDCKIITEKTVFNHIKEKAKSLPALTPFRNTCSPSSETLSLIKKRTHERQ 117
E A EDDDCK+ITEK VF HI+EKA++ P T N S SSE L L +KR +E++
Sbjct: 920 EGKTAAGVEDDDCKVITEKKVFQHIREKARNFPISTASNNAHSASSEPLILTRKRFYEQR 979
Query: 116 LGIDSVKENP 87
L + + P
Sbjct: 980 LQLHDELDVP 989
>ref|XP_006446556.1| hypothetical protein CICLE_v10017496mg, partial [Citrus clementina]
gi|557549167|gb|ESR59796.1| hypothetical protein
CICLE_v10017496mg, partial [Citrus clementina]
Length = 1314
Score = 60.5 bits (145), Expect = 2e-07
Identities = 31/70 (44%), Positives = 42/70 (60%)
Frame = -2
Query: 296 EDAPAVKDEDDDCKIITEKTVFNHIKEKAKSLPALTPFRNTCSPSSETLSLIKKRTHERQ 117
E A EDDDC++ITEK VF HI+EKA++ P T N S SSE L L +K +E++
Sbjct: 988 EGKTAAGVEDDDCRVITEKKVFQHIREKARNFPISTASNNAHSASSEPLILTRKHFYEQR 1047
Query: 116 LGIDSVKENP 87
L + + P
Sbjct: 1048 LQLHDELDVP 1057
>ref|XP_004142851.1| PREDICTED: probable ATP-dependent DNA helicase HFM1-like [Cucumis
sativus] gi|449483903|ref|XP_004156727.1| PREDICTED:
probable ATP-dependent DNA helicase HFM1-like [Cucumis
sativus]
Length = 1189
Score = 59.3 bits (142), Expect = 5e-07
Identities = 31/69 (44%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Frame = -2
Query: 296 EDAPAVKDEDDDCKIITEKTVFNHIKEKAKSLPALTPFRNTC-SPSSETLSLIKKRTHER 120
E PA ++D+CKIITE+TVF+HI+EKAKS P L +N SP++ T SL K +
Sbjct: 987 EADPATGKDEDECKIITERTVFDHIREKAKSFPMLAASKNNAHSPAAVTYSLTKNK-QPL 1045
Query: 119 QLGIDSVKE 93
+L +++++E
Sbjct: 1046 ELQVEALEE 1054
>gb|EOY02467.1| ATP binding,ATP-dependent helicases,DNA helicases [Theobroma cacao]
Length = 1252
Score = 57.8 bits (138), Expect = 1e-06
Identities = 28/61 (45%), Positives = 38/61 (62%)
Frame = -2
Query: 296 EDAPAVKDEDDDCKIITEKTVFNHIKEKAKSLPALTPFRNTCSPSSETLSLIKKRTHERQ 117
E PA E DDC+I T+F+HI+EKAKS P LTP + P+S L L +KR+ ++
Sbjct: 938 EGEPAAGTEKDDCEITIGHTIFDHIREKAKSFPLLTPSNSAYPPTSGGLILTRKRSRDQP 997
Query: 116 L 114
L
Sbjct: 998 L 998
>gb|EXC20319.1| putative ATP-dependent DNA helicase HFM1 [Morus notabilis]
Length = 1202
Score = 57.4 bits (137), Expect = 2e-06
Identities = 32/77 (41%), Positives = 47/77 (61%)
Frame = -2
Query: 299 NEDAPAVKDEDDDCKIITEKTVFNHIKEKAKSLPALTPFRNTCSPSSETLSLIKKRTHER 120
+E P V +D KI TE+ +F+HI+EKAKS P L PS+ETL+L +KRT E
Sbjct: 899 DEVEPPVDVNEDKTKITTEQKIFDHIREKAKSFPDLAASSIAYLPSTETLNLARKRTREE 958
Query: 119 QLGIDSVKENPVLQSAQ 69
+L + ++E VL+ +
Sbjct: 959 EL--EFLREIEVLEEIE 973
>ref|NP_189410.2| DNA helicase [Arabidopsis thaliana] gi|60172796|gb|AAX14498.1|
meiotic recombination protein MER3 [Arabidopsis thaliana]
gi|62001777|gb|AAX58606.1| ROCK-N-ROLLERS [Arabidopsis
thaliana] gi|332643836|gb|AEE77357.1| DNA helicase
[Arabidopsis thaliana]
Length = 1133
Score = 56.2 bits (134), Expect = 4e-06
Identities = 28/56 (50%), Positives = 38/56 (67%)
Frame = -2
Query: 296 EDAPAVKDEDDDCKIITEKTVFNHIKEKAKSLPALTPFRNTCSPSSETLSLIKKRT 129
E P V E+DDC II E TVF+HI+EKAK P+L P T SP+S S++K+++
Sbjct: 914 EKEPYVTMEEDDCVIINEHTVFDHIREKAKCFPSLNPLNPTSSPASGK-SILKRKS 968
>dbj|BAB02697.1| helicase-like protein [Arabidopsis thaliana]
Length = 1111
Score = 56.2 bits (134), Expect = 4e-06
Identities = 28/56 (50%), Positives = 38/56 (67%)
Frame = -2
Query: 296 EDAPAVKDEDDDCKIITEKTVFNHIKEKAKSLPALTPFRNTCSPSSETLSLIKKRT 129
E P V E+DDC II E TVF+HI+EKAK P+L P T SP+S S++K+++
Sbjct: 861 EKEPYVTMEEDDCVIINEHTVFDHIREKAKCFPSLNPLNPTSSPASGK-SILKRKS 915
>gb|ESW12968.1| hypothetical protein PHAVU_008G156500g [Phaseolus vulgaris]
Length = 771
Score = 55.5 bits (132), Expect = 7e-06
Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Frame = -2
Query: 296 EDAPAVKDEDDDCKIITEKTVFNHIKEKAKSLPALTPFRNTCSPSSETL-----SLIKKR 132
ED A+ E+D CK+ITEKTVF+HI++KAKS L+ F N PS E + +K
Sbjct: 510 EDGHALGVEEDKCKMITEKTVFDHIRQKAKSFSLLSAFDNIRCPSLEVFLSKDNTRVKSH 569
Query: 131 THERQLGIDSVKENPVLQSAQP 66
H ++ + + + LQ QP
Sbjct: 570 NHHHEIVV--LDDEDGLQVPQP 589
>gb|ESW12967.1| hypothetical protein PHAVU_008G156500g [Phaseolus vulgaris]
Length = 829
Score = 55.5 bits (132), Expect = 7e-06
Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Frame = -2
Query: 296 EDAPAVKDEDDDCKIITEKTVFNHIKEKAKSLPALTPFRNTCSPSSETL-----SLIKKR 132
ED A+ E+D CK+ITEKTVF+HI++KAKS L+ F N PS E + +K
Sbjct: 568 EDGHALGVEEDKCKMITEKTVFDHIRQKAKSFSLLSAFDNIRCPSLEVFLSKDNTRVKSH 627
Query: 131 THERQLGIDSVKENPVLQSAQP 66
H ++ + + + LQ QP
Sbjct: 628 NHHHEIVV--LDDEDGLQVPQP 647
>gb|ESW12966.1| hypothetical protein PHAVU_008G156500g [Phaseolus vulgaris]
Length = 798
Score = 55.5 bits (132), Expect = 7e-06
Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Frame = -2
Query: 296 EDAPAVKDEDDDCKIITEKTVFNHIKEKAKSLPALTPFRNTCSPSSETL-----SLIKKR 132
ED A+ E+D CK+ITEKTVF+HI++KAKS L+ F N PS E + +K
Sbjct: 537 EDGHALGVEEDKCKMITEKTVFDHIRQKAKSFSLLSAFDNIRCPSLEVFLSKDNTRVKSH 596
Query: 131 THERQLGIDSVKENPVLQSAQP 66
H ++ + + + LQ QP
Sbjct: 597 NHHHEIVV--LDDEDGLQVPQP 616
>gb|ESW12965.1| hypothetical protein PHAVU_008G156500g [Phaseolus vulgaris]
Length = 1135
Score = 55.5 bits (132), Expect = 7e-06
Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Frame = -2
Query: 296 EDAPAVKDEDDDCKIITEKTVFNHIKEKAKSLPALTPFRNTCSPSSETL-----SLIKKR 132
ED A+ E+D CK+ITEKTVF+HI++KAKS L+ F N PS E + +K
Sbjct: 874 EDGHALGVEEDKCKMITEKTVFDHIRQKAKSFSLLSAFDNIRCPSLEVFLSKDNTRVKSH 933
Query: 131 THERQLGIDSVKENPVLQSAQP 66
H ++ + + + LQ QP
Sbjct: 934 NHHHEIVV--LDDEDGLQVPQP 953