BLASTX nr result
ID: Catharanthus23_contig00016079
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00016079
(624 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXB44854.1| Putative ATP-dependent RNA helicase DHX33 [Morus ... 109 7e-22
gb|ESW25506.1| hypothetical protein PHAVU_003G041900g [Phaseolus... 109 7e-22
ref|XP_004493676.1| PREDICTED: ATP-dependent RNA helicase DHX8-l... 108 1e-21
ref|XP_003520120.1| PREDICTED: ATP-dependent RNA helicase DHX8 [... 108 1e-21
ref|XP_002512067.1| ATP-dependent RNA helicase, putative [Ricinu... 108 1e-21
ref|XP_002311345.2| RNA helicase family protein [Populus trichoc... 108 1e-21
ref|XP_003517845.1| PREDICTED: ATP-dependent RNA helicase DHX8-l... 107 2e-21
ref|XP_006484223.1| PREDICTED: ATP-dependent RNA helicase DHX8-l... 106 5e-21
ref|XP_006437910.1| hypothetical protein CICLE_v10030826mg [Citr... 106 5e-21
ref|XP_006415916.1| hypothetical protein EUTSA_v10006970mg [Eutr... 106 5e-21
gb|EOY01675.1| RNA helicase family protein isoform 2, partial [T... 105 1e-20
gb|EOY01674.1| RNA helicase family protein isoform 1 [Theobroma ... 105 1e-20
gb|EMJ28187.1| hypothetical protein PRUPE_ppa002115mg [Prunus pe... 104 2e-20
gb|AAF98584.1|AC013427_27 Strong similarity to RNA helicase (HRH... 104 2e-20
ref|NP_173961.3| RNA helicase family protein [Arabidopsis thalia... 104 2e-20
ref|XP_006656727.1| PREDICTED: ATP-dependent RNA helicase DHX8-l... 101 2e-19
ref|XP_006354359.1| PREDICTED: ATP-dependent RNA helicase DHX8-l... 101 2e-19
ref|XP_006306851.1| hypothetical protein CARUB_v10008395mg [Caps... 101 2e-19
ref|XP_006306850.1| hypothetical protein CARUB_v10008395mg [Caps... 101 2e-19
ref|XP_004246637.1| PREDICTED: ATP-dependent RNA helicase DHX8-l... 101 2e-19
>gb|EXB44854.1| Putative ATP-dependent RNA helicase DHX33 [Morus notabilis]
Length = 428
Score = 109 bits (272), Expect = 7e-22
Identities = 51/63 (80%), Positives = 56/63 (88%)
Frame = +1
Query: 1 SGRAGHVGPGKCYRLYPEPEFEKFEDSTTPEIKRCDLSSVILQLKALGIDDSPGFDFIEK 180
SGRAG GPGKC+RLYPE EFEK EDST PEIKRC+LS+VILQLKALG+DD GFDFIEK
Sbjct: 117 SGRAGRQGPGKCFRLYPESEFEKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFIEK 176
Query: 181 PNR 189
P+R
Sbjct: 177 PSR 179
>gb|ESW25506.1| hypothetical protein PHAVU_003G041900g [Phaseolus vulgaris]
Length = 706
Score = 109 bits (272), Expect = 7e-22
Identities = 51/63 (80%), Positives = 56/63 (88%)
Frame = +1
Query: 1 SGRAGHVGPGKCYRLYPEPEFEKFEDSTTPEIKRCDLSSVILQLKALGIDDSPGFDFIEK 180
SGRAG GPGKC+RLYPE EFEK EDST PEIKRC+LS+VILQLKALG+DD GFDFIEK
Sbjct: 395 SGRAGREGPGKCFRLYPEKEFEKLEDSTMPEIKRCNLSNVILQLKALGVDDILGFDFIEK 454
Query: 181 PNR 189
P+R
Sbjct: 455 PSR 457
>ref|XP_004493676.1| PREDICTED: ATP-dependent RNA helicase DHX8-like isoform X1 [Cicer
arietinum] gi|502109576|ref|XP_004493677.1| PREDICTED:
ATP-dependent RNA helicase DHX8-like isoform X2 [Cicer
arietinum]
Length = 714
Score = 108 bits (271), Expect = 1e-21
Identities = 51/63 (80%), Positives = 56/63 (88%)
Frame = +1
Query: 1 SGRAGHVGPGKCYRLYPEPEFEKFEDSTTPEIKRCDLSSVILQLKALGIDDSPGFDFIEK 180
SGRAG GPGKC+RLYPE EFEK EDST PEIKRC+LS+VILQLKALG+DD GFDFIEK
Sbjct: 403 SGRAGREGPGKCFRLYPENEFEKLEDSTMPEIKRCNLSNVILQLKALGVDDILGFDFIEK 462
Query: 181 PNR 189
P+R
Sbjct: 463 PSR 465
>ref|XP_003520120.1| PREDICTED: ATP-dependent RNA helicase DHX8 [Glycine max]
Length = 705
Score = 108 bits (271), Expect = 1e-21
Identities = 51/63 (80%), Positives = 56/63 (88%)
Frame = +1
Query: 1 SGRAGHVGPGKCYRLYPEPEFEKFEDSTTPEIKRCDLSSVILQLKALGIDDSPGFDFIEK 180
SGRAG GPGKC+RLYPE EFEK EDST PEIKRC+LS+VILQLKALG+DD GFDFIEK
Sbjct: 394 SGRAGREGPGKCFRLYPEREFEKLEDSTMPEIKRCNLSNVILQLKALGVDDILGFDFIEK 453
Query: 181 PNR 189
P+R
Sbjct: 454 PSR 456
>ref|XP_002512067.1| ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223549247|gb|EEF50736.1| ATP-dependent RNA helicase,
putative [Ricinus communis]
Length = 690
Score = 108 bits (271), Expect = 1e-21
Identities = 51/63 (80%), Positives = 56/63 (88%)
Frame = +1
Query: 1 SGRAGHVGPGKCYRLYPEPEFEKFEDSTTPEIKRCDLSSVILQLKALGIDDSPGFDFIEK 180
SGRAG GPGKC+RLYPE EFEK EDST PEIKRC+LS+VILQLKALG+DD GFDFIEK
Sbjct: 374 SGRAGREGPGKCFRLYPEREFEKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFIEK 433
Query: 181 PNR 189
P+R
Sbjct: 434 PSR 436
>ref|XP_002311345.2| RNA helicase family protein [Populus trichocarpa]
gi|550332737|gb|EEE88712.2| RNA helicase family protein
[Populus trichocarpa]
Length = 699
Score = 108 bits (270), Expect = 1e-21
Identities = 50/63 (79%), Positives = 56/63 (88%)
Frame = +1
Query: 1 SGRAGHVGPGKCYRLYPEPEFEKFEDSTTPEIKRCDLSSVILQLKALGIDDSPGFDFIEK 180
SGRAG GPGKC+RLYPE EFEK EDST PEIKRC+LS+VILQLKALG+DD GFDF+EK
Sbjct: 380 SGRAGREGPGKCFRLYPESEFEKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFLEK 439
Query: 181 PNR 189
P+R
Sbjct: 440 PSR 442
>ref|XP_003517845.1| PREDICTED: ATP-dependent RNA helicase DHX8-like isoform X1 [Glycine
max] gi|571434296|ref|XP_006573155.1| PREDICTED:
ATP-dependent RNA helicase DHX8-like isoform X2 [Glycine
max]
Length = 705
Score = 107 bits (268), Expect = 2e-21
Identities = 50/63 (79%), Positives = 56/63 (88%)
Frame = +1
Query: 1 SGRAGHVGPGKCYRLYPEPEFEKFEDSTTPEIKRCDLSSVILQLKALGIDDSPGFDFIEK 180
SGRAG GPGKC+RLYPE EFEK EDST PEIKRC+LS+VILQLKALG+DD GFDFI+K
Sbjct: 394 SGRAGREGPGKCFRLYPEREFEKLEDSTMPEIKRCNLSNVILQLKALGVDDILGFDFIDK 453
Query: 181 PNR 189
P+R
Sbjct: 454 PSR 456
>ref|XP_006484223.1| PREDICTED: ATP-dependent RNA helicase DHX8-like [Citrus sinensis]
Length = 717
Score = 106 bits (265), Expect = 5e-21
Identities = 49/63 (77%), Positives = 56/63 (88%)
Frame = +1
Query: 1 SGRAGHVGPGKCYRLYPEPEFEKFEDSTTPEIKRCDLSSVILQLKALGIDDSPGFDFIEK 180
SGRAG GPGKC+RLYPE EF+K EDST PEIKRC+LS+VILQLKALG+DD GFDF+EK
Sbjct: 406 SGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFMEK 465
Query: 181 PNR 189
P+R
Sbjct: 466 PSR 468
>ref|XP_006437910.1| hypothetical protein CICLE_v10030826mg [Citrus clementina]
gi|557540106|gb|ESR51150.1| hypothetical protein
CICLE_v10030826mg [Citrus clementina]
Length = 717
Score = 106 bits (265), Expect = 5e-21
Identities = 49/63 (77%), Positives = 56/63 (88%)
Frame = +1
Query: 1 SGRAGHVGPGKCYRLYPEPEFEKFEDSTTPEIKRCDLSSVILQLKALGIDDSPGFDFIEK 180
SGRAG GPGKC+RLYPE EF+K EDST PEIKRC+LS+VILQLKALG+DD GFDF+EK
Sbjct: 406 SGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFMEK 465
Query: 181 PNR 189
P+R
Sbjct: 466 PSR 468
>ref|XP_006415916.1| hypothetical protein EUTSA_v10006970mg [Eutrema salsugineum]
gi|557093687|gb|ESQ34269.1| hypothetical protein
EUTSA_v10006970mg [Eutrema salsugineum]
Length = 693
Score = 106 bits (265), Expect = 5e-21
Identities = 50/63 (79%), Positives = 55/63 (87%)
Frame = +1
Query: 1 SGRAGHVGPGKCYRLYPEPEFEKFEDSTTPEIKRCDLSSVILQLKALGIDDSPGFDFIEK 180
SGRAG GPGKC+RLYPE EF K EDST PEIKRC+LS+VILQLKALGIDD GFDFI+K
Sbjct: 382 SGRAGREGPGKCFRLYPESEFAKLEDSTKPEIKRCNLSNVILQLKALGIDDIVGFDFIDK 441
Query: 181 PNR 189
P+R
Sbjct: 442 PSR 444
>gb|EOY01675.1| RNA helicase family protein isoform 2, partial [Theobroma cacao]
Length = 635
Score = 105 bits (261), Expect = 1e-20
Identities = 50/63 (79%), Positives = 55/63 (87%)
Frame = +1
Query: 1 SGRAGHVGPGKCYRLYPEPEFEKFEDSTTPEIKRCDLSSVILQLKALGIDDSPGFDFIEK 180
SGRAG G GKC+RLYPE EFEK EDST PEIKRC+LS+VILQLKALG+DD GFDFIEK
Sbjct: 388 SGRAGRDGRGKCFRLYPESEFEKLEDSTKPEIKRCNLSNVILQLKALGVDDIFGFDFIEK 447
Query: 181 PNR 189
P+R
Sbjct: 448 PSR 450
>gb|EOY01674.1| RNA helicase family protein isoform 1 [Theobroma cacao]
Length = 764
Score = 105 bits (261), Expect = 1e-20
Identities = 50/63 (79%), Positives = 55/63 (87%)
Frame = +1
Query: 1 SGRAGHVGPGKCYRLYPEPEFEKFEDSTTPEIKRCDLSSVILQLKALGIDDSPGFDFIEK 180
SGRAG G GKC+RLYPE EFEK EDST PEIKRC+LS+VILQLKALG+DD GFDFIEK
Sbjct: 453 SGRAGRDGRGKCFRLYPESEFEKLEDSTKPEIKRCNLSNVILQLKALGVDDIFGFDFIEK 512
Query: 181 PNR 189
P+R
Sbjct: 513 PSR 515
>gb|EMJ28187.1| hypothetical protein PRUPE_ppa002115mg [Prunus persica]
Length = 714
Score = 104 bits (260), Expect = 2e-20
Identities = 48/63 (76%), Positives = 54/63 (85%)
Frame = +1
Query: 1 SGRAGHVGPGKCYRLYPEPEFEKFEDSTTPEIKRCDLSSVILQLKALGIDDSPGFDFIEK 180
SGRAG GPGKC+RLY E +F KFEDST PEIKRC+LS++ILQLKALG+DD GFDFIEK
Sbjct: 404 SGRAGREGPGKCFRLYQEDQFGKFEDSTKPEIKRCNLSNIILQLKALGVDDISGFDFIEK 463
Query: 181 PNR 189
P R
Sbjct: 464 PTR 466
>gb|AAF98584.1|AC013427_27 Strong similarity to RNA helicase (HRH1) from Homo sapiens
gb|D50487 and contains a Helicases conserved C-terminal
PF|00271 domain. EST gb|AV567077 comes from this gene
[Arabidopsis thaliana]
Length = 726
Score = 104 bits (259), Expect = 2e-20
Identities = 49/63 (77%), Positives = 55/63 (87%)
Frame = +1
Query: 1 SGRAGHVGPGKCYRLYPEPEFEKFEDSTTPEIKRCDLSSVILQLKALGIDDSPGFDFIEK 180
SGRAG GPGK +RLYPE EFEK EDST PEIKRC+LS++ILQLKALGIDD GFDFI+K
Sbjct: 415 SGRAGREGPGKSFRLYPEREFEKLEDSTKPEIKRCNLSNIILQLKALGIDDIVGFDFIDK 474
Query: 181 PNR 189
P+R
Sbjct: 475 PSR 477
>ref|NP_173961.3| RNA helicase family protein [Arabidopsis thaliana]
gi|332192562|gb|AEE30683.1| RNA helicase family protein
[Arabidopsis thaliana]
Length = 717
Score = 104 bits (259), Expect = 2e-20
Identities = 49/63 (77%), Positives = 55/63 (87%)
Frame = +1
Query: 1 SGRAGHVGPGKCYRLYPEPEFEKFEDSTTPEIKRCDLSSVILQLKALGIDDSPGFDFIEK 180
SGRAG GPGK +RLYPE EFEK EDST PEIKRC+LS++ILQLKALGIDD GFDFI+K
Sbjct: 406 SGRAGREGPGKSFRLYPEREFEKLEDSTKPEIKRCNLSNIILQLKALGIDDIVGFDFIDK 465
Query: 181 PNR 189
P+R
Sbjct: 466 PSR 468
>ref|XP_006656727.1| PREDICTED: ATP-dependent RNA helicase DHX8-like [Oryza brachyantha]
Length = 723
Score = 101 bits (252), Expect = 2e-19
Identities = 47/63 (74%), Positives = 54/63 (85%)
Frame = +1
Query: 1 SGRAGHVGPGKCYRLYPEPEFEKFEDSTTPEIKRCDLSSVILQLKALGIDDSPGFDFIEK 180
SGRAG GPGKCYRL+ E EF+K DST PEIKRC+L++V+LQLKALGIDD GFDFIEK
Sbjct: 411 SGRAGREGPGKCYRLFQESEFDKLVDSTVPEIKRCNLANVVLQLKALGIDDIIGFDFIEK 470
Query: 181 PNR 189
P+R
Sbjct: 471 PSR 473
>ref|XP_006354359.1| PREDICTED: ATP-dependent RNA helicase DHX8-like [Solanum tuberosum]
Length = 711
Score = 101 bits (252), Expect = 2e-19
Identities = 49/63 (77%), Positives = 52/63 (82%)
Frame = +1
Query: 1 SGRAGHVGPGKCYRLYPEPEFEKFEDSTTPEIKRCDLSSVILQLKALGIDDSPGFDFIEK 180
SGRAG GPGKCYRLY E FEK DST PEIKRCDLS+V+LQLKALGIDD FDFIEK
Sbjct: 401 SGRAGRDGPGKCYRLYQESFFEKLTDSTLPEIKRCDLSNVVLQLKALGIDDVINFDFIEK 460
Query: 181 PNR 189
P+R
Sbjct: 461 PDR 463
>ref|XP_006306851.1| hypothetical protein CARUB_v10008395mg [Capsella rubella]
gi|482575562|gb|EOA39749.1| hypothetical protein
CARUB_v10008395mg [Capsella rubella]
Length = 742
Score = 101 bits (252), Expect = 2e-19
Identities = 47/62 (75%), Positives = 54/62 (87%)
Frame = +1
Query: 1 SGRAGHVGPGKCYRLYPEPEFEKFEDSTTPEIKRCDLSSVILQLKALGIDDSPGFDFIEK 180
SGRAG PGKC+RLYPE EFEK EDST PEIKRC+LS++ILQLKALGIDD GFDFI++
Sbjct: 431 SGRAGREVPGKCFRLYPEREFEKLEDSTKPEIKRCNLSNIILQLKALGIDDIVGFDFIDR 490
Query: 181 PN 186
P+
Sbjct: 491 PS 492
>ref|XP_006306850.1| hypothetical protein CARUB_v10008395mg [Capsella rubella]
gi|482575561|gb|EOA39748.1| hypothetical protein
CARUB_v10008395mg [Capsella rubella]
Length = 717
Score = 101 bits (252), Expect = 2e-19
Identities = 47/62 (75%), Positives = 54/62 (87%)
Frame = +1
Query: 1 SGRAGHVGPGKCYRLYPEPEFEKFEDSTTPEIKRCDLSSVILQLKALGIDDSPGFDFIEK 180
SGRAG PGKC+RLYPE EFEK EDST PEIKRC+LS++ILQLKALGIDD GFDFI++
Sbjct: 406 SGRAGREVPGKCFRLYPEREFEKLEDSTKPEIKRCNLSNIILQLKALGIDDIVGFDFIDR 465
Query: 181 PN 186
P+
Sbjct: 466 PS 467
>ref|XP_004246637.1| PREDICTED: ATP-dependent RNA helicase DHX8-like [Solanum
lycopersicum]
Length = 711
Score = 101 bits (252), Expect = 2e-19
Identities = 49/63 (77%), Positives = 52/63 (82%)
Frame = +1
Query: 1 SGRAGHVGPGKCYRLYPEPEFEKFEDSTTPEIKRCDLSSVILQLKALGIDDSPGFDFIEK 180
SGRAG GPGKCYRLY E FEK DST PEIKRCDLS+V+LQLKALGIDD FDFIEK
Sbjct: 401 SGRAGRDGPGKCYRLYQESFFEKLTDSTLPEIKRCDLSNVVLQLKALGIDDVINFDFIEK 460
Query: 181 PNR 189
P+R
Sbjct: 461 PDR 463