BLASTX nr result

ID: Catharanthus23_contig00015890 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00015890
         (853 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531587.1| Cofactor required for Sp1 transcriptional ac...   145   1e-32
ref|XP_004238356.1| PREDICTED: mediator of RNA polymerase II tra...   145   2e-32
ref|XP_002281390.1| PREDICTED: mediator of RNA polymerase II tra...   144   3e-32
ref|XP_002323352.1| hypothetical protein POPTR_0016s06270g [Popu...   143   9e-32
ref|XP_006481684.1| PREDICTED: mediator of RNA polymerase II tra...   142   2e-31
ref|XP_006429955.1| hypothetical protein CICLE_v10012936mg [Citr...   142   2e-31
gb|EOY09624.1| Mediator of RNA polymerase II transcription subun...   138   2e-30
gb|EMJ27877.1| hypothetical protein PRUPE_ppa020973mg [Prunus pe...   135   2e-29
gb|EMJ28040.1| hypothetical protein PRUPE_ppa017343mg [Prunus pe...   135   2e-29
gb|EMJ04506.1| hypothetical protein PRUPE_ppa025881mg, partial [...   135   2e-29
gb|EMJ02047.1| hypothetical protein PRUPE_ppa026472mg, partial [...   135   2e-29
gb|EMJ18825.1| hypothetical protein PRUPE_ppa015506mg [Prunus pe...   134   5e-29
ref|XP_004170343.1| PREDICTED: mediator of RNA polymerase II tra...   133   7e-29
ref|XP_004136548.1| PREDICTED: mediator of RNA polymerase II tra...   133   7e-29
ref|XP_004303373.1| PREDICTED: mediator of RNA polymerase II tra...   132   1e-28
dbj|BAF98600.1| CM0545.310.nc [Lotus japonicus]                       132   1e-28
gb|EMJ26295.1| hypothetical protein PRUPE_ppa016436mg [Prunus pe...   132   2e-28
ref|XP_006582942.1| PREDICTED: uncharacterized protein LOC100812...   131   3e-28
gb|EMT09607.1| Putative mediator of RNA polymerase II transcript...   130   5e-28
gb|EMS65640.1| Putative mediator of RNA polymerase II transcript...   130   5e-28

>ref|XP_002531587.1| Cofactor required for Sp1 transcriptional activation subunit,
           putative [Ricinus communis] gi|223528783|gb|EEF30790.1|
           Cofactor required for Sp1 transcriptional activation
           subunit, putative [Ricinus communis]
          Length = 168

 Score =  145 bits (367), Expect = 1e-32
 Identities = 74/76 (97%), Positives = 75/76 (98%)
 Frame = -3

Query: 536 VERPSQYARRVEDISLIFKNLHHLLNSLRPHQARATLIHILELQIHRRKQAVEDIKRRRE 357
           VERPSQYARRVEDISLIFKNLHHLLNSLRPHQARATLIHILELQI RRKQAVEDIKRRRE
Sbjct: 93  VERPSQYARRVEDISLIFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIKRRRE 152

Query: 356 EAQKLLKEALGTLEGQ 309
           EAQKLLKEALGTL+GQ
Sbjct: 153 EAQKLLKEALGTLDGQ 168


>ref|XP_004238356.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           7b-like [Solanum lycopersicum]
           gi|565350175|ref|XP_006342049.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 7a-like [Solanum
           tuberosum]
          Length = 168

 Score =  145 bits (365), Expect = 2e-32
 Identities = 73/76 (96%), Positives = 75/76 (98%)
 Frame = -3

Query: 536 VERPSQYARRVEDISLIFKNLHHLLNSLRPHQARATLIHILELQIHRRKQAVEDIKRRRE 357
           VERPSQYARRVE+ISLIFKNLHHLLNSLRPHQARATLIHILELQI RRKQA+EDIKRRRE
Sbjct: 93  VERPSQYARRVEEISLIFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAIEDIKRRRE 152

Query: 356 EAQKLLKEALGTLEGQ 309
           EAQKLLKEALGTLEGQ
Sbjct: 153 EAQKLLKEALGTLEGQ 168


>ref|XP_002281390.1| PREDICTED: mediator of RNA polymerase II transcription subunit 7
           [Vitis vinifera] gi|297739781|emb|CBI29963.3| unnamed
           protein product [Vitis vinifera]
          Length = 168

 Score =  144 bits (364), Expect = 3e-32
 Identities = 73/76 (96%), Positives = 75/76 (98%)
 Frame = -3

Query: 536 VERPSQYARRVEDISLIFKNLHHLLNSLRPHQARATLIHILELQIHRRKQAVEDIKRRRE 357
           VERPSQYARRVEDISLIFKNLHHLLNSLRPHQARATLIHILELQI RRKQAVEDIKRRRE
Sbjct: 93  VERPSQYARRVEDISLIFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIKRRRE 152

Query: 356 EAQKLLKEALGTLEGQ 309
           EAQ+LLKEA+GTLEGQ
Sbjct: 153 EAQRLLKEAVGTLEGQ 168


>ref|XP_002323352.1| hypothetical protein POPTR_0016s06270g [Populus trichocarpa]
           gi|222867982|gb|EEF05113.1| hypothetical protein
           POPTR_0016s06270g [Populus trichocarpa]
          Length = 168

 Score =  143 bits (360), Expect = 9e-32
 Identities = 73/76 (96%), Positives = 74/76 (97%)
 Frame = -3

Query: 536 VERPSQYARRVEDISLIFKNLHHLLNSLRPHQARATLIHILELQIHRRKQAVEDIKRRRE 357
           VERPSQYARRVEDISLIFKNLHHLLNSLRPHQARATLIHILELQI RRKQAVEDIKR+RE
Sbjct: 93  VERPSQYARRVEDISLIFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIKRQRE 152

Query: 356 EAQKLLKEALGTLEGQ 309
           EAQKLLKEALGTL GQ
Sbjct: 153 EAQKLLKEALGTLAGQ 168


>ref|XP_006481684.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           7a-like [Citrus sinensis]
          Length = 168

 Score =  142 bits (358), Expect = 2e-31
 Identities = 72/76 (94%), Positives = 74/76 (97%)
 Frame = -3

Query: 536 VERPSQYARRVEDISLIFKNLHHLLNSLRPHQARATLIHILELQIHRRKQAVEDIKRRRE 357
           VERPSQYARRVEDISLIFKNLHHLLNSLRPHQARATLIHILELQI RRKQAVEDIKRRRE
Sbjct: 93  VERPSQYARRVEDISLIFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIKRRRE 152

Query: 356 EAQKLLKEALGTLEGQ 309
           EAQ+ LKE+LGTLEGQ
Sbjct: 153 EAQRRLKESLGTLEGQ 168


>ref|XP_006429955.1| hypothetical protein CICLE_v10012936mg [Citrus clementina]
           gi|557532012|gb|ESR43195.1| hypothetical protein
           CICLE_v10012936mg [Citrus clementina]
          Length = 168

 Score =  142 bits (358), Expect = 2e-31
 Identities = 72/76 (94%), Positives = 74/76 (97%)
 Frame = -3

Query: 536 VERPSQYARRVEDISLIFKNLHHLLNSLRPHQARATLIHILELQIHRRKQAVEDIKRRRE 357
           VERPSQYARRVEDISLIFKNLHHLLNSLRPHQARATLIHILELQI RRKQAVEDIKRRRE
Sbjct: 93  VERPSQYARRVEDISLIFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIKRRRE 152

Query: 356 EAQKLLKEALGTLEGQ 309
           EAQ+ LKE+LGTLEGQ
Sbjct: 153 EAQRRLKESLGTLEGQ 168


>gb|EOY09624.1| Mediator of RNA polymerase II transcription subunit 7 isoform 3
           [Theobroma cacao]
          Length = 168

 Score =  138 bits (348), Expect = 2e-30
 Identities = 69/76 (90%), Positives = 74/76 (97%)
 Frame = -3

Query: 536 VERPSQYARRVEDISLIFKNLHHLLNSLRPHQARATLIHILELQIHRRKQAVEDIKRRRE 357
           VERPSQYARRVE+ISLIFKNLHHLLNSLRPHQARATLIHILELQI RRKQA+EDIK RRE
Sbjct: 93  VERPSQYARRVEEISLIFKNLHHLLNSLRPHQARATLIHILELQIQRRKQALEDIKSRRE 152

Query: 356 EAQKLLKEALGTLEGQ 309
           EAQ+LLKE+LGTL+GQ
Sbjct: 153 EAQRLLKESLGTLDGQ 168


>gb|EMJ27877.1| hypothetical protein PRUPE_ppa020973mg [Prunus persica]
          Length = 134

 Score =  135 bits (340), Expect = 2e-29
 Identities = 67/74 (90%), Positives = 72/74 (97%)
 Frame = -3

Query: 536 VERPSQYARRVEDISLIFKNLHHLLNSLRPHQARATLIHILELQIHRRKQAVEDIKRRRE 357
           VERPSQYARR+EDISLIFKNLHHLLNSLRPHQARATLIHILELQI RRKQ VEDIKRRRE
Sbjct: 52  VERPSQYARRLEDISLIFKNLHHLLNSLRPHQARATLIHILELQIQRRKQVVEDIKRRRE 111

Query: 356 EAQKLLKEALGTLE 315
           EA++LLKE++GTLE
Sbjct: 112 EARRLLKESIGTLE 125


>gb|EMJ28040.1| hypothetical protein PRUPE_ppa017343mg [Prunus persica]
          Length = 143

 Score =  135 bits (339), Expect = 2e-29
 Identities = 66/74 (89%), Positives = 72/74 (97%)
 Frame = -3

Query: 536 VERPSQYARRVEDISLIFKNLHHLLNSLRPHQARATLIHILELQIHRRKQAVEDIKRRRE 357
           VERPSQYARR+EDISL+FKNLHHLLNSLRPHQARATLIHILELQI RRKQ VEDIKRRRE
Sbjct: 61  VERPSQYARRLEDISLVFKNLHHLLNSLRPHQARATLIHILELQIQRRKQVVEDIKRRRE 120

Query: 356 EAQKLLKEALGTLE 315
           EA++LLKE++GTLE
Sbjct: 121 EARRLLKESIGTLE 134


>gb|EMJ04506.1| hypothetical protein PRUPE_ppa025881mg, partial [Prunus persica]
          Length = 130

 Score =  135 bits (339), Expect = 2e-29
 Identities = 66/74 (89%), Positives = 72/74 (97%)
 Frame = -3

Query: 536 VERPSQYARRVEDISLIFKNLHHLLNSLRPHQARATLIHILELQIHRRKQAVEDIKRRRE 357
           VERPSQYARR+EDISL+FKNLHHLLNSLRPHQARATLIHILELQI RRKQ VEDIKRRRE
Sbjct: 48  VERPSQYARRLEDISLVFKNLHHLLNSLRPHQARATLIHILELQIQRRKQVVEDIKRRRE 107

Query: 356 EAQKLLKEALGTLE 315
           EA++LLKE++GTLE
Sbjct: 108 EARRLLKESIGTLE 121


>gb|EMJ02047.1| hypothetical protein PRUPE_ppa026472mg, partial [Prunus persica]
          Length = 130

 Score =  135 bits (339), Expect = 2e-29
 Identities = 66/74 (89%), Positives = 72/74 (97%)
 Frame = -3

Query: 536 VERPSQYARRVEDISLIFKNLHHLLNSLRPHQARATLIHILELQIHRRKQAVEDIKRRRE 357
           VERPSQYARR+EDISL+FKNLHHLLNSLRPHQARATLIHILELQI RRKQ VEDIKRRRE
Sbjct: 48  VERPSQYARRLEDISLVFKNLHHLLNSLRPHQARATLIHILELQIQRRKQVVEDIKRRRE 107

Query: 356 EAQKLLKEALGTLE 315
           EA++LLKE++GTLE
Sbjct: 108 EARRLLKESIGTLE 121


>gb|EMJ18825.1| hypothetical protein PRUPE_ppa015506mg [Prunus persica]
          Length = 143

 Score =  134 bits (336), Expect = 5e-29
 Identities = 65/74 (87%), Positives = 72/74 (97%)
 Frame = -3

Query: 536 VERPSQYARRVEDISLIFKNLHHLLNSLRPHQARATLIHILELQIHRRKQAVEDIKRRRE 357
           VE+PSQYARR+EDISL+FKNLHHLLNSLRPHQARATLIHILELQI RRKQ VEDIKRRRE
Sbjct: 61  VEKPSQYARRLEDISLVFKNLHHLLNSLRPHQARATLIHILELQIQRRKQVVEDIKRRRE 120

Query: 356 EAQKLLKEALGTLE 315
           EA++LLKE++GTLE
Sbjct: 121 EARRLLKESIGTLE 134


>ref|XP_004170343.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           7b-like, partial [Cucumis sativus]
          Length = 123

 Score =  133 bits (335), Expect = 7e-29
 Identities = 67/75 (89%), Positives = 72/75 (96%)
 Frame = -3

Query: 536 VERPSQYARRVEDISLIFKNLHHLLNSLRPHQARATLIHILELQIHRRKQAVEDIKRRRE 357
           VERPSQYARRVE+ISLIFKNLHHLLNSLRPHQARATLIHILELQI RR+QAVEDIKRRRE
Sbjct: 48  VERPSQYARRVEEISLIFKNLHHLLNSLRPHQARATLIHILELQIERRRQAVEDIKRRRE 107

Query: 356 EAQKLLKEALGTLEG 312
           EAQ+LL E+L TL+G
Sbjct: 108 EAQRLLMESLETLDG 122


>ref|XP_004136548.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           7b-like [Cucumis sativus]
          Length = 168

 Score =  133 bits (335), Expect = 7e-29
 Identities = 67/75 (89%), Positives = 72/75 (96%)
 Frame = -3

Query: 536 VERPSQYARRVEDISLIFKNLHHLLNSLRPHQARATLIHILELQIHRRKQAVEDIKRRRE 357
           VERPSQYARRVE+ISLIFKNLHHLLNSLRPHQARATLIHILELQI RR+QAVEDIKRRRE
Sbjct: 93  VERPSQYARRVEEISLIFKNLHHLLNSLRPHQARATLIHILELQIERRRQAVEDIKRRRE 152

Query: 356 EAQKLLKEALGTLEG 312
           EAQ+LL E+L TL+G
Sbjct: 153 EAQRLLMESLETLDG 167


>ref|XP_004303373.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           7b-like [Fragaria vesca subsp. vesca]
          Length = 175

 Score =  132 bits (333), Expect = 1e-28
 Identities = 68/74 (91%), Positives = 71/74 (95%)
 Frame = -3

Query: 536 VERPSQYARRVEDISLIFKNLHHLLNSLRPHQARATLIHILELQIHRRKQAVEDIKRRRE 357
           VERPSQYARRVE+ISLIFKNLHHLLNSLRPHQARATLIHILELQI RRKQAVEDIKRRRE
Sbjct: 93  VERPSQYARRVEEISLIFKNLHHLLNSLRPHQARATLIHILELQIKRRKQAVEDIKRRRE 152

Query: 356 EAQKLLKEALGTLE 315
           EAQ LLKE+L +LE
Sbjct: 153 EAQALLKESLESLE 166


>dbj|BAF98600.1| CM0545.310.nc [Lotus japonicus]
          Length = 168

 Score =  132 bits (333), Expect = 1e-28
 Identities = 66/76 (86%), Positives = 71/76 (93%)
 Frame = -3

Query: 536 VERPSQYARRVEDISLIFKNLHHLLNSLRPHQARATLIHILELQIHRRKQAVEDIKRRRE 357
           +ERPSQYARRVE+IS +FKNLHHLLNSLRPHQARATLIHILELQI RRKQAVEDIKRRRE
Sbjct: 93  IERPSQYARRVEEISTVFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIKRRRE 152

Query: 356 EAQKLLKEALGTLEGQ 309
           EA+ LLKEAL  L+GQ
Sbjct: 153 EARSLLKEALTILDGQ 168


>gb|EMJ26295.1| hypothetical protein PRUPE_ppa016436mg [Prunus persica]
          Length = 166

 Score =  132 bits (332), Expect = 2e-28
 Identities = 66/74 (89%), Positives = 71/74 (95%)
 Frame = -3

Query: 536 VERPSQYARRVEDISLIFKNLHHLLNSLRPHQARATLIHILELQIHRRKQAVEDIKRRRE 357
           VERPSQYAR VEDISLIFKNLHHLLNSL PHQARATLIHILELQI RRKQAVEDIKRRRE
Sbjct: 84  VERPSQYARSVEDISLIFKNLHHLLNSLCPHQARATLIHILELQIQRRKQAVEDIKRRRE 143

Query: 356 EAQKLLKEALGTLE 315
           EAQ+LLK+++GT+E
Sbjct: 144 EAQRLLKDSIGTME 157


>ref|XP_006582942.1| PREDICTED: uncharacterized protein LOC100812231 isoform X1 [Glycine
           max]
          Length = 168

 Score =  131 bits (330), Expect = 3e-28
 Identities = 64/75 (85%), Positives = 71/75 (94%)
 Frame = -3

Query: 536 VERPSQYARRVEDISLIFKNLHHLLNSLRPHQARATLIHILELQIHRRKQAVEDIKRRRE 357
           +ERPSQYARRVE+IS +FKNLHHLLNSLRPHQARATLIHILELQI RRKQAVEDIKRRRE
Sbjct: 93  IERPSQYARRVEEISTVFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIKRRRE 152

Query: 356 EAQKLLKEALGTLEG 312
           EA++LL E+L TL+G
Sbjct: 153 EARRLLNESLATLDG 167


>gb|EMT09607.1| Putative mediator of RNA polymerase II transcription subunit 7
           [Aegilops tauschii]
          Length = 179

 Score =  130 bits (328), Expect = 5e-28
 Identities = 66/80 (82%), Positives = 73/80 (91%)
 Frame = -3

Query: 536 VERPSQYARRVEDISLIFKNLHHLLNSLRPHQARATLIHILELQIHRRKQAVEDIKRRRE 357
           VERPSQYARRVEDISLIFKNLHHLLNSLRPHQARATLIH+LE QI RRKQA+EDIK+RRE
Sbjct: 96  VERPSQYARRVEDISLIFKNLHHLLNSLRPHQARATLIHLLESQIQRRKQAIEDIKQRRE 155

Query: 356 EAQKLLKEALGTLEGQQ*RV 297
           EAQ+LL E+L  +EG Q +V
Sbjct: 156 EAQRLLGESLVIIEGSQQQV 175


>gb|EMS65640.1| Putative mediator of RNA polymerase II transcription subunit 7
           [Triticum urartu]
          Length = 186

 Score =  130 bits (328), Expect = 5e-28
 Identities = 66/80 (82%), Positives = 73/80 (91%)
 Frame = -3

Query: 536 VERPSQYARRVEDISLIFKNLHHLLNSLRPHQARATLIHILELQIHRRKQAVEDIKRRRE 357
           VERPSQYARRVEDISLIFKNLHHLLNSLRPHQARATLIH+LE QI RRKQA+EDIK+RRE
Sbjct: 103 VERPSQYARRVEDISLIFKNLHHLLNSLRPHQARATLIHLLESQIQRRKQAIEDIKQRRE 162

Query: 356 EAQKLLKEALGTLEGQQ*RV 297
           EAQ+LL E+L  +EG Q +V
Sbjct: 163 EAQRLLGESLVIIEGSQQQV 182


Top