BLASTX nr result

ID: Catharanthus23_contig00015888 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00015888
         (754 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMJ25387.1| hypothetical protein PRUPE_ppa016658mg, partial [...    55   7e-07
gb|EAZ07429.1| hypothetical protein OsI_29683 [Oryza sativa Indi...    54   9e-07
ref|XP_002459653.1| hypothetical protein SORBIDRAFT_02g008045 [S...    52   3e-06
gb|EMJ13840.1| hypothetical protein PRUPE_ppa018094mg [Prunus pe...    51   4e-06
emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga...    55   7e-06

>gb|EMJ25387.1| hypothetical protein PRUPE_ppa016658mg, partial [Prunus persica]
          Length = 495

 Score = 55.5 bits (132), Expect(2) = 7e-07
 Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
 Frame = -3

Query: 407 IIQKSHLNKMIATEVNGFSGGIWVFWQG-QMDMEVLSVHDQIVNMAIKKGGSVLWIFSAI 231
           I Q    +     +  GFSGG+W+ W   ++ +++L   DQ ++ ++   G   W+F+A+
Sbjct: 370 IAQSLGFSNFEIVDATGFSGGLWLLWDATKVHVDILGTSDQSISASVAWPGQSPWLFTAV 429

Query: 230 YASSKVSFRHLLWNYLEHLGSC 165
           YAS     R  LW YL  +  C
Sbjct: 430 YASPCGIKRAKLWEYLSFIADC 451



 Score = 24.6 bits (52), Expect(2) = 7e-07
 Identities = 7/13 (53%), Positives = 12/13 (92%)
 Frame = -2

Query: 159 LPWILVGDWNQIL 121
           LPW++ GD+N++L
Sbjct: 454 LPWLIAGDFNEML 466


>gb|EAZ07429.1| hypothetical protein OsI_29683 [Oryza sativa Indica Group]
          Length = 318

 Score = 53.9 bits (128), Expect(2) = 9e-07
 Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
 Frame = -3

Query: 389 LNKMIATEVNGFSGGIWVFWQGQMDMEVLSVHDQIVNMAIKKGGSV-LWIFSAIYASSKV 213
           L+  +  + NG SGG+ +FW    ++E+ SV+D+ ++  I+   +  LW  S +Y   + 
Sbjct: 34  LSGFVGVDSNGLSGGLALFWHESFNVEIKSVNDRFIDAYIRVSPTAPLWHISCVYGEPRT 93

Query: 212 SFRHLLWNYLEHL 174
             RHL+W +L  L
Sbjct: 94  ENRHLMWQHLSSL 106



 Score = 25.8 bits (55), Expect(2) = 9e-07
 Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = -2

Query: 159 LPWILVGDWNQILF-FLQLSMVVEILIEI*LLGFGRLWKLLIFFDMGFFG 13
           LPW+++GD+N+ L+ F  LS       EI +  F  +  +    D+GF G
Sbjct: 112 LPWVVLGDFNEALWQFEHLSK--NPRSEIQMQAFRDVLDVCNLIDLGFEG 159


>ref|XP_002459653.1| hypothetical protein SORBIDRAFT_02g008045 [Sorghum bicolor]
           gi|241923030|gb|EER96174.1| hypothetical protein
           SORBIDRAFT_02g008045 [Sorghum bicolor]
          Length = 723

 Score = 51.6 bits (122), Expect(2) = 3e-06
 Identities = 22/74 (29%), Positives = 40/74 (54%)
 Frame = -3

Query: 395 SHLNKMIATEVNGFSGGIWVFWQGQMDMEVLSVHDQIVNMAIKKGGSVLWIFSAIYASSK 216
           S  +K +A    G SGG+ +FW   + +E+L      ++  IK+G +  W  + +Y  ++
Sbjct: 352 SSTSKSVAISSTGRSGGLGIFWMDNIHLEILPYSQYHIDAIIKEGDNEPWRLTCVYGEAQ 411

Query: 215 VSFRHLLWNYLEHL 174
           VS RH  W+ L+ +
Sbjct: 412 VSERHKTWSLLKFI 425



 Score = 26.2 bits (56), Expect(2) = 3e-06
 Identities = 15/49 (30%), Positives = 26/49 (53%)
 Frame = -2

Query: 159 LPWILVGDWNQILFFLQLSMVVEILIEI*LLGFGRLWKLLIFFDMGFFG 13
           LPW  VGD+N++L   +  + V+      + GF  +  +  F D+G+ G
Sbjct: 431 LPWACVGDFNEVLHQSE-HVGVQERSRAQIAGFREMVDVCGFTDLGYEG 478


>gb|EMJ13840.1| hypothetical protein PRUPE_ppa018094mg [Prunus persica]
          Length = 351

 Score = 50.8 bits (120), Expect(2) = 4e-06
 Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
 Frame = -3

Query: 359 GFSGGIWVFWQGQ-MDMEVLSVHDQIVNMAIKKGGSVLWIFSAIYASSKVSFRHLLWNYL 183
           GF G +W+ W  Q + +E++  HDQ++   +   G   W+FSA+YA         LW YL
Sbjct: 44  GFCGWLWLLWNDQKVHVEIIGTHDQVITACVSWPGMDPWLFSAVYAKPCGVKSEKLWEYL 103

Query: 182 EHLGSC 165
             +  C
Sbjct: 104 GFVVDC 109



 Score = 26.6 bits (57), Expect(2) = 4e-06
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = -2

Query: 159 LPWILVGDWNQILFFLQLSMVVEILIEI*LLGF 61
           LPW++VGD+N++   LQ+   +E +    L GF
Sbjct: 112 LPWLIVGDFNEM---LQIEDKIEEVAACRLKGF 141


>emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1378

 Score = 54.7 bits (130), Expect(2) = 7e-06
 Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
 Frame = -3

Query: 368 EVNGFSGGIWVFWQGQ-MDMEVLSVHDQIVNMAIKKGGSVLWIFSAIYASSKVSFRHLLW 192
           E  GF GGIW+FW+ + + +     H Q + + I++ G   W+FSAIYAS   + R  LW
Sbjct: 60  EAEGFRGGIWLFWKSEEVTVTPYGSHSQHLTVEIRRIGDDPWLFSAIYASPDSTLRKELW 119

Query: 191 NYLEHL 174
             LE +
Sbjct: 120 RELEQI 125



 Score = 21.9 bits (45), Expect(2) = 7e-06
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -2

Query: 156 PWILVGDWNQ 127
           PW+L GD+N+
Sbjct: 132 PWLLAGDFNE 141


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