BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00015780
         (1103 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAK71569.2|AC087852_29 putative reverse transcriptase [Oryza ...    81   4e-21
gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indi...    81   8e-21
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...    87   3e-20
gb|EEE61581.1| hypothetical protein OsJ_15963 [Oryza sativa Japo...    75   8e-20
gb|EPS63383.1| hypothetical protein M569_11401 [Genlisea aurea]        72   1e-19
gb|ABA96650.1| retrotransposon protein, putative, unclassified [...    79   2e-19
ref|XP_002459653.1| hypothetical protein SORBIDRAFT_02g008045 [S...    77   4e-19
ref|XP_002465815.1| hypothetical protein SORBIDRAFT_01g046340 [S...    71   2e-18
gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse ...    67   3e-18
gb|AAS55787.1| hypothetical protein [Oryza sativa Japonica Group...    67   1e-17
gb|ABA94593.2| retrotransposon protein, putative, unclassified [...    67   2e-17
gb|EEE52364.1| hypothetical protein OsJ_34428 [Oryza sativa Japo...    67   2e-17
gb|EMJ11928.1| hypothetical protein PRUPE_ppa021798mg [Prunus pe...    75   2e-17
ref|XP_004980332.1| PREDICTED: uncharacterized protein LOC101786...    65   8e-17
gb|EMJ04651.1| hypothetical protein PRUPE_ppa022115mg [Prunus pe...    79   1e-16
gb|AAP54617.2| retrotransposon protein, putative, unclassified [...    67   1e-16
gb|EMJ18520.1| hypothetical protein PRUPE_ppa019733mg [Prunus pe...    78   1e-16
emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulga...    72   3e-16
gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa ...    75   4e-16
ref|XP_002450843.1| hypothetical protein SORBIDRAFT_05g019526 [S...    74   6e-16

>gb|AAK71569.2|AC087852_29 putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 1833

 Score = 81.3 bits (199), Expect(2) = 4e-21
 Identities = 50/204 (24%), Positives = 88/204 (43%), Gaps = 1/204 (0%)
 Frame = -1

Query: 614 LGFSRNPFSWNNKRADDDNIQERLDRGMTNDLWRVLFPQAVVSHLTT-IXXXXXXXXXXX 438
           +GF   P+++ N + +  N++ RLDRG+ +  W   FPQAV++HLTT             
Sbjct: 153 IGFQGAPWTFCNMQREGRNVKVRLDRGVASPAWSSRFPQAVITHLTTPSSDHAPLLLERE 212

Query: 437 XXXXXXXXXPFRFEAMRTMDDSIGSVIDSSWRGDVSGTPLFKLTSKLKNLKAVLKSWNKS 258
                      R+E +   + S+  VI  +W      + L  +  K+K     L SW+K 
Sbjct: 213 ETTLARPMKIMRYEEVWERESSLPEVIQEAWTMGADASTLGDINDKMKVTMTKLVSWSKD 272

Query: 257 VFGHIKYSISILRGEXXXXXXXXXSFIL*KENHYQXXXXXXXXXXXLMWREKPKQRWLEG 78
             G+++  I  LR +              + +  +           + W+++ +  WL+ 
Sbjct: 273 KIGNVRKKIKDLREKLGELRNIGLLDTDNEVHSVKKELEEMLHREEIWWKQRSRITWLKE 332

Query: 77  GDANTHFFHLSTIIQRRYNSIDRL 6
           GD NT +FHL    + + N I +L
Sbjct: 333 GDLNTRYFHLKASWRAKKNKIKKL 356



 Score = 48.1 bits (113), Expect(2) = 4e-21
 Identities = 27/82 (32%), Positives = 44/82 (53%)
 Frame = -3

Query: 954 VPAIGKS*GLALCWKENLDVQIVVSN*WIINYLGFNDPPSQLWQFTYVYDPTRSSLKHLF 775
           V  +GK  GLAL W E+++V +   N   I+ L   +     W+ T+VY   R+  +HL 
Sbjct: 39  VNGVGKGGGLALFWDESMNVVLKSYNSRHIDVL-ITELDCCTWRATFVYGEPRAQDRHLM 97

Query: 774 WAALKDLVGAFSGP*MILGDFN 709
           W+ L+ +      P +++GDFN
Sbjct: 98  WSLLRRIRSNSGDPWLMIGDFN 119


>gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indica Group]
          Length = 1874

 Score = 81.3 bits (199), Expect(2) = 8e-21
 Identities = 50/204 (24%), Positives = 88/204 (43%), Gaps = 1/204 (0%)
 Frame = -1

Query: 614 LGFSRNPFSWNNKRADDDNIQERLDRGMTNDLWRVLFPQAVVSHLTT-IXXXXXXXXXXX 438
           +GF   P+++ N + +  N++ RLDRG+ +  W   FPQAV++HLTT             
Sbjct: 128 IGFQGAPWTFCNMQREGRNVKVRLDRGVASPAWSSRFPQAVITHLTTPSSDHAPLLLERE 187

Query: 437 XXXXXXXXXPFRFEAMRTMDDSIGSVIDSSWRGDVSGTPLFKLTSKLKNLKAVLKSWNKS 258
                      R+E +   + S+  VI  +W      + L  +  K+K     L SW+K 
Sbjct: 188 ETTLARPMKIMRYEEVWERESSLPEVIQEAWTMGADASTLGDINDKMKVTMTKLVSWSKD 247

Query: 257 VFGHIKYSISILRGEXXXXXXXXXSFIL*KENHYQXXXXXXXXXXXLMWREKPKQRWLEG 78
             G+++  I  LR +              + +  +           + W+++ +  WL+ 
Sbjct: 248 KIGNVRKKIKDLREKLGELRNIGLLDTDNEVHSVKKELEEMLHREEIWWKQRSRITWLKE 307

Query: 77  GDANTHFFHLSTIIQRRYNSIDRL 6
           GD NT +FHL    + + N I +L
Sbjct: 308 GDLNTRYFHLKASWRAKKNKIKKL 331



 Score = 47.0 bits (110), Expect(2) = 8e-21
 Identities = 26/82 (31%), Positives = 44/82 (53%)
 Frame = -3

Query: 954 VPAIGKS*GLALCWKENLDVQIVVSN*WIINYLGFNDPPSQLWQFTYVYDPTRSSLKHLF 775
           V  +GK  GLAL W E+++V +   N   I+ L   +     W+ T++Y   R+  +HL 
Sbjct: 14  VNGVGKGGGLALFWDESMNVVLKSYNSRHIDVL-ITELDCCTWRATFLYGEPRAQDRHLM 72

Query: 774 WAALKDLVGAFSGP*MILGDFN 709
           W+ L+ +      P +++GDFN
Sbjct: 73  WSLLRRIRSNSGDPWLMIGDFN 94


>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score = 87.4 bits (215), Expect(2) = 3e-20
 Identities = 61/214 (28%), Positives = 91/214 (42%), Gaps = 11/214 (5%)
 Frame = -1

Query: 614 LGFSRNPFSWNNKRADDDNIQERLDRGMTNDLWRVLFPQAVVSHLTT-----IXXXXXXX 450
           LGF    F+W N R  D NIQERLDR + NDLW++ FP + VSHL       +       
Sbjct: 178 LGFVGYEFTWTNNRGGDANIQERLDRFVANDLWKIKFPGSFVSHLPKRKSDHVPIVASVK 237

Query: 449 XXXXXXXXXXXXXPFRFEAMRTMDDSIGSVIDSSW-RGDVSGTPLFKLTSKLKNLKAVLK 273
                         FRFEAM   +     V+  +W RG  +G  L +  +K       L 
Sbjct: 238 GAQSAATRTKKSKRFRFEAMWLREGESDEVVKETWMRGTDAGINLARTANK-------LL 290

Query: 272 SWNKSVFGHIKYSISILRGEXXXXXXXXXSFIL*KEN-----HYQXXXXXXXXXXXLMWR 108
           SW+K  FGH+   I + + +         S    ++N                   + W 
Sbjct: 291 SWSKQKFGHVAKEIRMCQHQMKVLMESEPS----EDNIMHMRALDARMDELEKREEVYWH 346

Query: 107 EKPKQRWLEGGDANTHFFHLSTIIQRRYNSIDRL 6
           ++ +Q W++ GD NT FFH     + + N++ R+
Sbjct: 347 QRSRQDWIKSGDKNTKFFHQKASHREQRNNVRRI 380



 Score = 38.9 bits (89), Expect(2) = 3e-20
 Identities = 41/163 (25%), Positives = 65/163 (39%), Gaps = 12/163 (7%)
 Frame = -3

Query: 1101 RGLAKPSVARSLRVFLSSQKPSVLFXXXXXXXXXXXXXXXXLT-FHHSHVVPAIG----K 937
            RG+  PS   +LR  L+S+ P ++F                   + H   V   G    +
Sbjct: 10   RGMGSPSALSALRRLLASENPQIVFLSETKLKSYEMESVKKKLKWEHMVAVDCEGECRKR 69

Query: 936  S*GLALCWKENLDVQIVVSN*WIINYLGFNDPPSQLWQFTYVYDPTRSSLKHLFWAALKD 757
              GLA+ W+  + VQ++  +   I+ +   +   + W+FT +Y       K    A L  
Sbjct: 70   RGGLAMLWRSEIKVQVMSMSSNHIDIVVGEEAQGE-WRFTGIYGYPEEEHKDKTGALLSA 128

Query: 756  LVGAFSGP*MILGDFN--CICSQNK-----NREDALFFPPATE 649
            L  A   P +  GDFN   + S+ K     N  +A  F  A E
Sbjct: 129  LARASRRPWLCGGDFNLMLVASEKKGGDGFNSREADIFRNAME 171


>gb|EEE61581.1| hypothetical protein OsJ_15963 [Oryza sativa Japonica Group]
          Length = 1494

 Score = 75.1 bits (183), Expect(2) = 8e-20
 Identities = 53/205 (25%), Positives = 85/205 (41%), Gaps = 2/205 (0%)
 Frame = -1

Query: 614  LGFSRNPFSWNNKRADDDNIQERLDRGMTNDLWRVLFPQAVVSHLTTI--XXXXXXXXXX 441
            +GF   P++++N +A  +N++ RLDR + + +WR +F QA + HLTT             
Sbjct: 419  IGFQGVPWTYDNNQASPNNVKVRLDRAVASPVWRAMFDQANIMHLTTACSDHVPLLLEKG 478

Query: 440  XXXXXXXXXXPFRFEAMRTMDDSIGSVIDSSWRGDVSGTPLFKLTSKLKNLKAVLKSWNK 261
                         FEA+     S  S+   SW        L  + +KL      LK W++
Sbjct: 479  GNMQQRRRSKINCFEAVWERVKSFNSIEHESWDDGGLAKNLGDVRTKLAYTMENLKRWSR 538

Query: 260  SVFGHIKYSISILRGEXXXXXXXXXSFIL*KENHYQXXXXXXXXXXXLMWREKPKQRWLE 81
               G+IK SI   R E                +  +           + W+++ +  WL+
Sbjct: 539  DKIGNIKKSIERCRRELEEMRMRGREDSEPDVHRLKIFLQELLHREEIWWKQRSRITWLK 598

Query: 80   GGDANTHFFHLSTIIQRRYNSIDRL 6
             GD NT +FHL    + R N I +L
Sbjct: 599  EGDRNTRYFHLKASWRARKNLIKKL 623



 Score = 49.7 bits (117), Expect(2) = 8e-20
 Identities = 28/83 (33%), Positives = 44/83 (53%)
 Frame = -3

Query: 957 VVPAIGKS*GLALCWKENLDVQIVVSN*WIINYLGFNDPPSQLWQFTYVYDPTRSSLKHL 778
           VV  +GK  GLAL W E+L V++   N   I+ +   +P    W  T+VY   ++  +H 
Sbjct: 304 VVNGVGKGGGLALFWDESLKVELKSYNMRHIDVI-ITEPEGARWTATFVYGEPKAQNRHE 362

Query: 777 FWAALKDLVGAFSGP*MILGDFN 709
            W  L+ +    S P +++GDFN
Sbjct: 363 MWNLLRRIRLNASDPWLMIGDFN 385


>gb|EPS63383.1| hypothetical protein M569_11401 [Genlisea aurea]
          Length = 1469

 Score = 72.4 bits (176), Expect(2) = 1e-19
 Identities = 55/205 (26%), Positives = 80/205 (39%), Gaps = 5/205 (2%)
 Frame = -1

Query: 614  LGFSRNPFSWNNKRADDDNIQERLDRGMTNDLWRVLFPQAVVSHL----TTIXXXXXXXX 447
            +GF+  PF+W NKR   D ++ RLDR +    W  LFP+A+V HL    +          
Sbjct: 541  IGFTGFPFTWCNKRKAPDTVRARLDRAVATTTWNNLFPRAIVKHLPYGSSDHLPLLIFLD 600

Query: 446  XXXXXXXXXXXXPFRFEAMRTMDDSIGSVIDSSWRGDVSGTPLFKLTSKLKNLKAVLKSW 267
                         F+FEA  T       VI  SW  +   T       +++  +  L  W
Sbjct: 601  PAAPTSIRPNKRRFKFEAFWTTIPGCADVIHQSWAPNSQPT---NFNYRIQKTRMSLLKW 657

Query: 266  NKSVFGHIKYSISILRGE-XXXXXXXXXSFIL*KENHYQXXXXXXXXXXXLMWREKPKQR 90
             +S  G IK  +  +  E            I   E+  +           + W+++ K  
Sbjct: 658  YQSKVGPIKSRLQKIATELDLLARQSITDDIKHCESALKEEQASLWKQEEMYWKQRGKIH 717

Query: 89   WLEGGDANTHFFHLSTIIQRRYNSI 15
            WL  GD NT FFH S   +R  N I
Sbjct: 718  WLRCGDRNTAFFHASASEKRTQNRI 742



 Score = 52.0 bits (123), Expect(2) = 1e-19
 Identities = 39/138 (28%), Positives = 58/138 (42%)
 Frame = -3

Query: 1101 RGLAKPSVARSLRVFLSSQKPSVLFXXXXXXXXXXXXXXXXLTFHHSHVVPAIGKS*GLA 922
            RGL   S  R LR  +SS  PS++F                   +    V A G S GLA
Sbjct: 377  RGLRSASTVRRLRDVISSDAPSMIFLSETKCLASHVEWLKECLSYFGVAVSATGLSGGLA 436

Query: 921  LCWKENLDVQIVVSN*WIINYLGFNDPPSQLWQFTYVYDPTRSSLKHLFWAALKDLVGAF 742
            L W++++ V ++      I+ L    P    W+FT  Y      L+   W  L+ +    
Sbjct: 437  LFWRKDVCVSLLSFCSSYIDVLVRLTPTLPEWRFTGFYGNPAVQLRPRSWDLLRQIRHHS 496

Query: 741  SGP*MILGDFNCICSQNK 688
              P ++ GDFN +  QN+
Sbjct: 497  ICPWLVAGDFNEVVMQNE 514


>gb|ABA96650.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1100

 Score = 79.0 bits (193), Expect(2) = 2e-19
 Identities = 53/207 (25%), Positives = 87/207 (42%), Gaps = 2/207 (0%)
 Frame = -1

Query: 620 FVLGFSRNPFSWNNKRADDDNIQERLDRGMTNDLWRVLFPQAVVSHLTT--IXXXXXXXX 447
           F LGF   P++++NKR    N++ RLDR + +  W VL+PQA V HL +           
Sbjct: 283 FDLGFIGTPWTYDNKRKGGYNVRVRLDRAVASQSWSVLYPQAQVRHLVSSRSDHCPILVQ 342

Query: 446 XXXXXXXXXXXXPFRFEAMRTMDDSIGSVIDSSWRGDVSGTPLFKLTSKLKNLKAVLKSW 267
                         R+E +   ++S+   I ++W    + T L  ++SKLK +   L+ W
Sbjct: 343 CTPDEDKDKPSRCMRYEILWEREESLSEEIRTAWEQHHAATDLGSVSSKLKLVMGALQHW 402

Query: 266 NKSVFGHIKYSISILRGEXXXXXXXXXSFIL*KENHYQXXXXXXXXXXXLMWREKPKQRW 87
           ++  FG +   +  LR +              +                +MW ++ +  W
Sbjct: 403 SREKFGSVNKELGALRKKMEELQLGGRHTHDQEYQSCSRRMEEILYREEMMWLQRSRVAW 462

Query: 86  LEGGDANTHFFHLSTIIQRRYNSIDRL 6
           L  GD NT  FH     + R N I +L
Sbjct: 463 LREGDRNTS-FHRKAAWRHRKNKISKL 488



 Score = 44.7 bits (104), Expect(2) = 2e-19
 Identities = 23/82 (28%), Positives = 40/82 (48%)
 Frame = -3

Query: 954 VPAIGKS*GLALCWKENLDVQIVVSN*WIINYLGFNDPPSQLWQFTYVYDPTRSSLKHLF 775
           V  +G   GLAL W E+  + ++      I+ L   D  +  W+ T+VY   ++  +H  
Sbjct: 170 VDGVGSGGGLALFWDESFHLDLLSYTNRHIDVLVKEDRSAMQWRCTFVYGEPKAHERHNM 229

Query: 774 WAALKDLVGAFSGP*MILGDFN 709
           W  L+ +    + P  ++GDFN
Sbjct: 230 WTLLRRIKPNSTAPWCLMGDFN 251


>ref|XP_002459653.1| hypothetical protein SORBIDRAFT_02g008045 [Sorghum bicolor]
            gi|241923030|gb|EER96174.1| hypothetical protein
            SORBIDRAFT_02g008045 [Sorghum bicolor]
          Length = 723

 Score = 77.0 bits (188), Expect(2) = 4e-19
 Identities = 56/206 (27%), Positives = 81/206 (39%), Gaps = 3/206 (1%)
 Frame = -1

Query: 614  LGFSRNPFSWNNKRADDDNIQERLDRGMTNDLWRVLFPQAVVSHLTTI--XXXXXXXXXX 441
            LG+    +++  K A     + RLDRG+ N  W   FP+A V HLT              
Sbjct: 474  LGYEGRSWTFEKKVAGGTYCRTRLDRGLANADWCCRFPEASVKHLTAAASDHGPILLQWR 533

Query: 440  XXXXXXXXXXPFRFEAMRTMDDSIGSVIDSSWRGDVSGTPLFKLTSKLKNLKAVLKSWNK 261
                       FR+E M        + +  SWR D       +L +KLK +   L  W++
Sbjct: 534  SVQRPRKQKRQFRYEQMWETHLDFSNTLADSWRRDGEAISTLELKAKLKGVANHLVQWDR 593

Query: 260  SVFGHIKYSISILRGEXXXXXXXXXSF-IL*KENHYQXXXXXXXXXXXLMWREKPKQRWL 84
            + FG+++  +  L  E                E               LMWR++ +  WL
Sbjct: 594  TTFGNVREELRRLHKELERMQQDPQRLGPSYAELKVVERIRELNHREELMWRQRSRVMWL 653

Query: 83   EGGDANTHFFHLSTIIQRRYNSIDRL 6
              GD NT FFHL    +R+ N I RL
Sbjct: 654  AAGDRNTRFFHLRASKRRKRNRIQRL 679



 Score = 45.4 bits (106), Expect(2) = 4e-19
 Identities = 27/96 (28%), Positives = 52/96 (54%), Gaps = 3/96 (3%)
 Frame = -3

Query: 963 SHVVPAIGKS*GLALCWKENLDVQIVVSN*WIINYL---GFNDPPSQLWQFTYVYDPTRS 793
           S  + + G+S GL + W +N+ ++I+  + + I+ +   G N+P    W+ T VY   + 
Sbjct: 357 SVAISSTGRSGGLGIFWMDNIHLEILPYSQYHIDAIIKEGDNEP----WRLTCVYGEAQV 412

Query: 792 SLKHLFWAALKDLVGAFSGP*MILGDFNCICSQNKN 685
           S +H  W+ LK +  +   P   +GDFN +  Q+++
Sbjct: 413 SERHKTWSLLKFIKASSPLPWACVGDFNEVLHQSEH 448


>ref|XP_002465815.1| hypothetical protein SORBIDRAFT_01g046340 [Sorghum bicolor]
            gi|241919669|gb|EER92813.1| hypothetical protein
            SORBIDRAFT_01g046340 [Sorghum bicolor]
          Length = 1028

 Score = 70.9 bits (172), Expect(2) = 2e-18
 Identities = 50/205 (24%), Positives = 89/205 (43%), Gaps = 1/205 (0%)
 Frame = -1

Query: 614  LGFSRNPFSWNNKRADDDNIQERLDRGMTNDLWRVLFPQAVVSHLTTIXXXXXXXXXXXX 435
            LGF   P++W+N++  D N++ RLDRG+ +D +  L+ +   S                 
Sbjct: 565  LGFIGLPYTWDNRQEGDHNVKVRLDRGLASDSFLDLYREHSSSR---------------- 608

Query: 434  XXXXXXXXPFRFEAMRTMDDSIGSVIDSSWRGDVSGTPLFKLTSKLKNLKAVLKSWNKSV 255
                     FR+E M   D S  ++I  +W  +V    L ++ S L+ +K+ L++W + V
Sbjct: 609  ----RRRKNFRYENMWQRDPSYMALIRDAWDQNVGVGGLDEMQSSLRGVKSRLQTWERDV 664

Query: 254  FGHIKYSISILRGEXXXXXXXXXSF-IL*KENHYQXXXXXXXXXXXLMWREKPKQRWLEG 78
            FG +K S++ L  E               KE               +M +++ +  WL  
Sbjct: 665  FGSVKKSLAALHRELEMERGRLIGCGPSRKEKQLMARITELLSREEVMEKQRARMDWLRD 724

Query: 77   GDANTHFFHLSTIIQRRYNSIDRLM 3
            GD NT  F   +  + + N++  L+
Sbjct: 725  GDRNTALFQAKSRARAKRNAVTSLI 749



 Score = 49.3 bits (116), Expect(2) = 2e-18
 Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
 Frame = -3

Query: 972 FHHSHVVPAIGKS*GLALCWKENLDVQIVVSN*WIINYLGFNDPPS--QLWQFTYVYDPT 799
           F H   V ++G+  GLAL W+  ++V++   +   I+ + F DP +  + W+FT  Y  +
Sbjct: 443 FAHGLGVGSVGRGGGLALLWRSEMEVRLESLDKMHID-VTFLDPLTREEKWRFTGFYGES 501

Query: 798 RSSLKHLFWAALKDLVGAFSGP*MILGDFN 709
           R  L++  W  L+ L G  S P + +GDFN
Sbjct: 502 RRELRYRSWECLQMLRGRSSLPWLCMGDFN 531


>gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse transcriptase [Oryza sativa
           Japonica Group]
          Length = 1382

 Score = 67.4 bits (163), Expect(2) = 3e-18
 Identities = 54/211 (25%), Positives = 87/211 (41%), Gaps = 7/211 (3%)
 Frame = -1

Query: 614 LGFSRNPFSWNNKRADDDNIQERLDRGMTNDLWRVLFPQAVVSHLTTIXXXXXXXXXXXX 435
           LGF    F+W+NK+  + N + RLDR + N  +   F   +V ++ T             
Sbjct: 178 LGFVGPKFTWSNKQDANSNSKVRLDRAVANGEFSRYFEDCLVENVITTSSDHYAISIDLS 237

Query: 434 XXXXXXXXP-----FRFEAMRTMDDSIGSVIDSSWRGDVSG-TPLFKLTSKLKNLKAVLK 273
                         FRFEA     +    V+++SWR   +G   L  + S L+ +   LK
Sbjct: 238 RRNHGQRRIPIQQGFRFEAAWLRAEDYREVVENSWRISSAGCVGLRGVWSVLQQVAVSLK 297

Query: 272 SWNKSVFGHIKYSI-SILRGEXXXXXXXXXSFIL*KENHYQXXXXXXXXXXXLMWREKPK 96
            W+K+ FG ++  I  + R             ++ +E   +           +M R++ +
Sbjct: 298 DWSKASFGSVRRKILKMERKLKSLRQSPVNDVVIQEEKLIEQQLCELFEKEEIMARQRSR 357

Query: 95  QRWLEGGDANTHFFHLSTIIQRRYNSIDRLM 3
             WL  GD NT FFH     +RR N I  L+
Sbjct: 358 VDWLREGDRNTAFFHARASARRRTNRIKELV 388



 Score = 52.0 bits (123), Expect(2) = 3e-18
 Identities = 40/134 (29%), Positives = 56/134 (41%), Gaps = 3/134 (2%)
 Frame = -3

Query: 1101 RGLAKPSVARSLRVFLSSQKPSVLFXXXXXXXXXXXXXXXXLT-FHHSHVVPAIGKS*GL 925
            RGL   +    LR  + S +PS++F                   F  S  V   G S GL
Sbjct: 14   RGLGSAATVGELRWLVKSLRPSLVFLSETKMRDKQARNLMWSLGFSGSFAVSCEGLSGGL 73

Query: 924  ALCWKENLDVQIVVSN*WIINYLGFND--PPSQLWQFTYVYDPTRSSLKHLFWAALKDLV 751
            AL W     V +   N   I+ L   +  PP   W+ ++VY   +  L+H FW  L+ L 
Sbjct: 74   ALFWTTAYTVSLRGFNSHFIDVLVSTEELPP---WRISFVYGEPKRELRHFFWNLLRRLH 130

Query: 750  GAFSGP*MILGDFN 709
              + GP +  GDFN
Sbjct: 131  DQWRGPWLCCGDFN 144


>gb|AAS55787.1| hypothetical protein [Oryza sativa Japonica Group]
            gi|54291856|gb|AAV32224.1| hypothetical protein [Oryza
            sativa Japonica Group]
          Length = 1936

 Score = 66.6 bits (161), Expect(2) = 1e-17
 Identities = 51/207 (24%), Positives = 86/207 (41%), Gaps = 4/207 (1%)
 Frame = -1

Query: 614  LGFSRNPFSWNNKRADDDNIQERLDRGMTNDLWRVLFPQAVVSHLTT--IXXXXXXXXXX 441
            LGF   P +++N+R    N++ RLDR + +D WR LFP+A VSHL +             
Sbjct: 809  LGFKGVPHTYDNRRDGWRNVKVRLDRAVADDKWRDLFPEAQVSHLVSPCSDHSPILLEFI 868

Query: 440  XXXXXXXXXXPFRFEAMRTMDDSIGSVIDSSWRGDVSGTPLFKLTSKLKNLKAVLKSWNK 261
                         +E +   +     VI+ +W      T L  +   L  + + L+SW+K
Sbjct: 869  VKDTTRPRQKCLHYEIVWEREPESVQVIEEAWINAGVKTDLGDINIALGRVMSALRSWSK 928

Query: 260  SVFGHIKYSISILRG--EXXXXXXXXXSFIL*KENHYQXXXXXXXXXXXLMWREKPKQRW 87
            +   ++   +   R   E         S I    +H             ++W ++ +  W
Sbjct: 929  TKVKNVGKELEKARKKLEDLIASNAARSSIRQATDHMN----EMLYREEMLWLQRSRVNW 984

Query: 86   LEGGDANTHFFHLSTIIQRRYNSIDRL 6
            L+ GD NT FFH   + + + N I +L
Sbjct: 985  LKEGDRNTRFFHSRAVWRAKKNKISKL 1011



 Score = 51.2 bits (121), Expect(2) = 1e-17
 Identities = 35/132 (26%), Positives = 54/132 (40%), Gaps = 1/132 (0%)
 Frame = -3

Query: 1101 RGLAKPSVARSLRVFLSSQKPSVLFXXXXXXXXXXXXXXXXLTFHHSHV-VPAIGKS*GL 925
            RGL   +  + LR  +      ++F                       V V + GKS GL
Sbjct: 644  RGLGNTATVQDLRALIQKAGSQLVFLCETRQSVEKMSRLRRKLAFRGFVGVSSEGKSGGL 703

Query: 924  ALCWKENLDVQIVVSN*WIINYLGFNDPPSQLWQFTYVYDPTRSSLKHLFWAALKDLVGA 745
            AL W E++ V +   N   I+      P    W  T+VY   R   +H  W+ L+ +  +
Sbjct: 704  ALYWDESVSVDVKDINKRYIDAYVRLSPDEPQWHITFVYGEPRVENRHRMWSLLRTIRQS 763

Query: 744  FSGP*MILGDFN 709
             + P M++GDFN
Sbjct: 764  SALPWMVIGDFN 775


>gb|ABA94593.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1469

 Score = 66.6 bits (161), Expect(2) = 2e-17
 Identities = 45/199 (22%), Positives = 83/199 (41%), Gaps = 2/199 (1%)
 Frame = -1

Query: 596  PFSWNNKRADDDNIQERLDRGMTNDLWRVLFPQAVVSHLTT--IXXXXXXXXXXXXXXXX 423
            PF+++NKR   +N++ RLDR + ++ WR  FP A ++HL +                   
Sbjct: 588  PFTYDNKRQGRNNVRVRLDRAIADNAWRDTFPNATLAHLASPRSDHCPISLQLSQEMKQP 647

Query: 422  XXXXPFRFEAMRTMDDSIGSVIDSSWRGDVSGTPLFKLTSKLKNLKAVLKSWNKSVFGHI 243
                   +E     + S+  V+  SW    + + L  +++ L+ + A L SW+K  F +I
Sbjct: 648  ARKKILHYEICWEREPSLPEVVQESWVEAGTKSDLGDISAALRKVMASLHSWSKVKFKNI 707

Query: 242  KYSISILRGEXXXXXXXXXSFIL*KENHYQXXXXXXXXXXXLMWREKPKQRWLEGGDANT 63
               +   R +              ++               ++W ++ +  WL+ GD NT
Sbjct: 708  GRELQKARKKLAELLETYADSAAVRQ--ASDHMNELLYREEMLWLQRSRINWLKEGDRNT 765

Query: 62   HFFHLSTIIQRRYNSIDRL 6
             FFH   + + + N I  L
Sbjct: 766  RFFHSKAVWRAKKNRIQSL 784



 Score = 50.4 bits (119), Expect(2) = 2e-17
 Identities = 29/83 (34%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
 Frame = -3

Query: 954 VPAIGKS*GLALCWKENLDVQI-VVSN*WIINYLGFNDPPSQLWQFTYVYDPTRSSLKHL 778
           V + G S GLAL W E+++V+I  +   +I  Y+  + P   LW  T+VY   R   +H 
Sbjct: 485 VDSDGMSGGLALYWHESVNVEIKALCERYIDAYVRLS-PDGPLWHATFVYGEPRVENRHN 543

Query: 777 FWAALKDLVGAFSGP*MILGDFN 709
            W+ L+ L  + + P +++GDFN
Sbjct: 544 MWSMLRSLRNSSNLPWLVIGDFN 566


>gb|EEE52364.1| hypothetical protein OsJ_34428 [Oryza sativa Japonica Group]
          Length = 1102

 Score = 66.6 bits (161), Expect(2) = 2e-17
 Identities = 45/199 (22%), Positives = 83/199 (41%), Gaps = 2/199 (1%)
 Frame = -1

Query: 596  PFSWNNKRADDDNIQERLDRGMTNDLWRVLFPQAVVSHLTT--IXXXXXXXXXXXXXXXX 423
            PF+++NKR   +N++ RLDR + ++ WR  FP A ++HL +                   
Sbjct: 595  PFTYDNKRQGRNNVRVRLDRAIADNAWRDTFPNATLAHLASPRSDHCPISLQLSQEMKQP 654

Query: 422  XXXXPFRFEAMRTMDDSIGSVIDSSWRGDVSGTPLFKLTSKLKNLKAVLKSWNKSVFGHI 243
                   +E     + S+  V+  SW    + + L  +++ L+ + A L SW+K  F +I
Sbjct: 655  ARKKILHYEICWEREPSLPEVVQESWVEAGTKSDLGDISAALRKVMASLHSWSKVKFKNI 714

Query: 242  KYSISILRGEXXXXXXXXXSFIL*KENHYQXXXXXXXXXXXLMWREKPKQRWLEGGDANT 63
               +   R +              ++               ++W ++ +  WL+ GD NT
Sbjct: 715  GRELQKARKKLAELLETYADSAAVRQ--ASDHMNELLYREEMLWLQRSRINWLKEGDRNT 772

Query: 62   HFFHLSTIIQRRYNSIDRL 6
             FFH   + + + N I  L
Sbjct: 773  RFFHSKAVWRAKKNRIQSL 791



 Score = 50.4 bits (119), Expect(2) = 2e-17
 Identities = 29/83 (34%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
 Frame = -3

Query: 954 VPAIGKS*GLALCWKENLDVQI-VVSN*WIINYLGFNDPPSQLWQFTYVYDPTRSSLKHL 778
           V + G S GLAL W E+++V+I  +   +I  Y+  + P   LW  T+VY   R   +H 
Sbjct: 492 VDSDGMSGGLALYWHESVNVEIKALCERYIDAYVRLS-PDGPLWHATFVYGEPRVENRHN 550

Query: 777 FWAALKDLVGAFSGP*MILGDFN 709
            W+ L+ L  + + P +++GDFN
Sbjct: 551 MWSMLRSLRNSSNLPWLVIGDFN 573


>gb|EMJ11928.1| hypothetical protein PRUPE_ppa021798mg [Prunus persica]
          Length = 1171

 Score = 75.5 bits (184), Expect(2) = 2e-17
 Identities = 50/197 (25%), Positives = 78/197 (39%)
 Frame = -1

Query: 596 PFSWNNKRADDDNIQERLDRGMTNDLWRVLFPQAVVSHLTTIXXXXXXXXXXXXXXXXXX 417
           PF+W N   D+  I ERLDR + N  W  L P + + +L  +                  
Sbjct: 272 PFTWCNGHHDNTIIYERLDRALANPDWMRLLPHSELQNLPIVRSDHGPIFLKCNQISRRI 331

Query: 416 XXPFRFEAMRTMDDSIGSVIDSSWRGDVSGTPLFKLTSKLKNLKAVLKSWNKSVFGHIKY 237
              F+FEAM     +   V+   W     G    ++ +     K  LK+WN+SVFG + +
Sbjct: 332 PKTFKFEAMWLAHKNFDQVVSQVWNCSYVGNAAQQIQTCCNTFKHQLKNWNRSVFGDLFH 391

Query: 236 SISILRGEXXXXXXXXXSFIL*KENHYQXXXXXXXXXXXLMWREKPKQRWLEGGDANTHF 57
            + I                  +EN              + +  K +  WL+ GD NT +
Sbjct: 392 KLRIT-----------------QEN-----------LEEVFYARKARANWLQLGDKNTKY 423

Query: 56  FHLSTIIQRRYNSIDRL 6
           FH   +I+R+ N I R+
Sbjct: 424 FHTQALIRRKRNQILRV 440



 Score = 41.2 bits (95), Expect(2) = 2e-17
 Identities = 24/93 (25%), Positives = 46/93 (49%), Gaps = 1/93 (1%)
 Frame = -3

Query: 963 SHVVPAIGKS*GLALCWKENL-DVQIVVSN*WIINYLGFNDPPSQLWQFTYVYDPTRSSL 787
           S  +P +G+  G+ L W   + ++ I+  +   IN    +   ++ W  T++Y   + + 
Sbjct: 147 SFCIPYVGRCGGIILMWNPAIFNISILNYHECYINCELQDITTNKSWTTTFIYAYPQKAK 206

Query: 786 KHLFWAALKDLVGAFSGP*MILGDFNCICSQNK 688
           +   W  +  L    + P ++LGDFN ICS N+
Sbjct: 207 QSNLWREIVSLKPTNNHPWLMLGDFNSICSMNE 239


>ref|XP_004980332.1| PREDICTED: uncharacterized protein LOC101786154 [Setaria italica]
          Length = 720

 Score = 65.5 bits (158), Expect(2) = 8e-17
 Identities = 50/210 (23%), Positives = 89/210 (42%), Gaps = 6/210 (2%)
 Frame = -1

Query: 614 LGFSRNPFSW-NNKRADDDNIQERLDRGMTNDLWRVLFPQAVVSH----LTTIXXXXXXX 450
           LGF+ + F+W NN    ++ ++ERLDR + N+ WR  FP   V +     +         
Sbjct: 173 LGFAGDLFTWWNNSHNSNEYVRERLDRAVANEEWRAHFPLYKVINGEPRHSDHRPVVVLT 232

Query: 449 XXXXXXXXXXXXXPFRFEAMRTMDDSIGSVIDSSWRGDVSGTPLFKLTSKLKNLKAVLKS 270
                         FRFEA    ++    +++++W+  + G     +   ++++   L  
Sbjct: 233 EEDVHSGARRGGQSFRFEAHWVEEEQCAPIVENAWKTVMEGRR-GTVMEAVQSVATDLGD 291

Query: 269 WNKSVFGHIKYSISILR-GEXXXXXXXXXSFIL*KENHYQXXXXXXXXXXXLMWREKPKQ 93
           WN++V G ++  +  LR               L +    +           L WR++ K 
Sbjct: 292 WNRNVLGDLEKRMKQLRKAMEACRRGPINEQSLRRMELLKFRWERLEEQKDLYWRQRAKA 351

Query: 92  RWLEGGDANTHFFHLSTIIQRRYNSIDRLM 3
            W+  GD NTHFFH     +R+ + I RL+
Sbjct: 352 HWVSKGDRNTHFFHQYASERRKRSRIKRLV 381



 Score = 49.3 bits (116), Expect(2) = 8e-17
 Identities = 40/135 (29%), Positives = 54/135 (40%), Gaps = 4/135 (2%)
 Frame = -3

Query: 1101 RGLAKPSVARSLRVFLSSQKPSVLFXXXXXXXXXXXXXXXXLTFHHSHVVP-AIGKS*GL 925
            RGL   +  R L      + P +LF                     + VV   +G+S GL
Sbjct: 9    RGLGNGAAIRGLLNVQKEEDPDILFLSETKLDEHRIKGLRWKLGLTNVVVKDCVGRSGGL 68

Query: 924  ALCWKENLDVQIVVSN*WIINYL---GFNDPPSQLWQFTYVYDPTRSSLKHLFWAALKDL 754
            AL W+  +DV +     WI          +  S  W+ T  Y   R+  KHL W AL+ L
Sbjct: 69   ALFWRTGVDVHVR----WISRLYIDADVQEADSFSWRLTGFYGEPRTENKHLSWKALRTL 124

Query: 753  VGAFSGP*MILGDFN 709
              A   P + LGDFN
Sbjct: 125  NAARRKPWLCLGDFN 139


>gb|EMJ04651.1| hypothetical protein PRUPE_ppa022115mg [Prunus persica]
          Length = 1755

 Score = 78.6 bits (192), Expect(2) = 1e-16
 Identities = 59/206 (28%), Positives = 84/206 (40%), Gaps = 3/206 (1%)
 Frame = -1

Query: 614  LGFSRNPFSWNNKRADDDNIQERLDRGMTNDLWRVLFPQAVVSHL--TTIXXXXXXXXXX 441
            LGF+   F+W   R  D  ++ RLDR +    W+ LFP   V HL  +            
Sbjct: 585  LGFNGYKFTWKC-RFGDGFVRVRLDRALATTSWQNLFPGFSVQHLDPSRSDHLPILVRIR 643

Query: 440  XXXXXXXXXXPFRFEAMRTMDDSIGSVIDSSWRGDVSGTPLFKLTSKLKNLKAVLKSWNK 261
                       F FEAM T        I   W    +  P+  L  K+K +  VL+ W+K
Sbjct: 644  HATCQKSRYRRFHFEAMWTTHVDCEKTIKQVWESVGNLDPMVGLDKKIKQMTWVLQRWSK 703

Query: 260  SVFGHIKYSISILRGEXXXXXXXXXSFIL*KENH-YQXXXXXXXXXXXLMWREKPKQRWL 84
            S FGHIK    +LR +         S  + ++    Q           L W ++ ++ WL
Sbjct: 704  STFGHIKEETRVLRAKLASLFQAPYSERVEEDRRVVQKSLDELLAKNELYWCQRSRENWL 763

Query: 83   EGGDANTHFFHLSTIIQRRYNSIDRL 6
            + GD NT +FH     +RR N I  L
Sbjct: 764  KAGDKNTSYFHQKATNRRRRNIIKGL 789



 Score = 35.8 bits (81), Expect(2) = 1e-16
 Identities = 25/85 (29%), Positives = 37/85 (43%)
 Frame = -3

Query: 942 GKS*GLALCWKENLDVQIVVSN*WIINYLGFNDPPSQLWQFTYVYDPTRSSLKHLFWAAL 763
           G S GLAL WKE +DV +   +   I+    ++     W+ T  Y       +   W  L
Sbjct: 474 GYSGGLALLWKEEVDVHVCAFSDHFIDVQIGSNGGGDRWRLTVFYGFPAVQDREKSWILL 533

Query: 762 KDLVGAFSGP*MILGDFNCICSQNK 688
             L      P + +GDFN I S ++
Sbjct: 534 DQLGHHNQLPWLCVGDFNEILSTDE 558


>gb|AAP54617.2| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group] gi|125575397|gb|EAZ16681.1| hypothetical
           protein OsJ_32156 [Oryza sativa Japonica Group]
          Length = 1339

 Score = 67.4 bits (163), Expect(2) = 1e-16
 Identities = 54/211 (25%), Positives = 87/211 (41%), Gaps = 7/211 (3%)
 Frame = -1

Query: 614 LGFSRNPFSWNNKRADDDNIQERLDRGMTNDLWRVLFPQAVVSHLTTIXXXXXXXXXXXX 435
           LGF    F+W+NK+  + N + RLDR + N  +   F   +V ++ T             
Sbjct: 135 LGFVGPKFTWSNKQDANSNSKVRLDRAVANGEFSRYFEDCLVENVITTSSDHYAISIDLS 194

Query: 434 XXXXXXXXP-----FRFEAMRTMDDSIGSVIDSSWRGDVSG-TPLFKLTSKLKNLKAVLK 273
                         FRFEA     +    V+++SWR   +G   L  + S L+ +   LK
Sbjct: 195 RRNHGQRRIPIQQGFRFEAAWLRAEDYREVVENSWRISSAGCVGLRGVWSVLQQVAVSLK 254

Query: 272 SWNKSVFGHIKYSI-SILRGEXXXXXXXXXSFIL*KENHYQXXXXXXXXXXXLMWREKPK 96
            W+K+ FG ++  I  + R             ++ +E   +           +M R++ +
Sbjct: 255 DWSKASFGSVRRKILKMERKLKSLRQSPVNDVVIQEEKLIEQQLCELFEKEEIMARQRSR 314

Query: 95  QRWLEGGDANTHFFHLSTIIQRRYNSIDRLM 3
             WL  GD NT FFH     +RR N I  L+
Sbjct: 315 VDWLREGDRNTAFFHARASARRRTNRIKELV 345



 Score = 47.0 bits (110), Expect(2) = 1e-16
 Identities = 31/90 (34%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
 Frame = -3

Query: 972 FHHSHVVPAIGKS*GLALCWKENLDVQIVVSN*WIINYLGFND--PPSQLWQFTYVYDPT 799
           F  S  V   G S GLAL W     V +   N   I+ L   +  PP   W+ ++VY   
Sbjct: 15  FSGSFAVSCEGLSGGLALFWTTAYTVSLRGFNSHFIDVLVSTEELPP---WRISFVYGEP 71

Query: 798 RSSLKHLFWAALKDLVGAFSGP*MILGDFN 709
           +  L+H FW  L+ L   + GP +  GDFN
Sbjct: 72  KRELRHFFWNLLRRLHDQWRGPWLCCGDFN 101


>gb|EMJ18520.1| hypothetical protein PRUPE_ppa019733mg [Prunus persica]
          Length = 1275

 Score = 78.2 bits (191), Expect(2) = 1e-16
 Identities = 59/206 (28%), Positives = 83/206 (40%), Gaps = 3/206 (1%)
 Frame = -1

Query: 614 LGFSRNPFSWNNKRADDDNIQERLDRGMTNDLWRVLFPQAVVSHL--TTIXXXXXXXXXX 441
           LGF+   F+W   R  D  ++ RLDR +    W+ LFP   V HL  +            
Sbjct: 131 LGFNGYKFTWKC-RFGDGFVRVRLDRALATTSWQNLFPGFSVQHLDPSRSDHLPILVRIR 189

Query: 440 XXXXXXXXXXPFRFEAMRTMDDSIGSVIDSSWRGDVSGTPLFKLTSKLKNLKAVLKSWNK 261
                      F FEAM T        I   W       P+  L  K+K +  VL+ W+K
Sbjct: 190 HATCQKSRYHRFHFEAMWTTHVDCEKTIKQVWESVGDLDPMVGLDKKIKQMTWVLQRWSK 249

Query: 260 SVFGHIKYSISILRGEXXXXXXXXXSFIL*KENH-YQXXXXXXXXXXXLMWREKPKQRWL 84
           S FGHIK    +LR +         S  + ++    Q           L W ++ ++ WL
Sbjct: 250 STFGHIKEETRVLRAKLASLFQAPYSERVEEDRRVVQKSLDELLAKNELYWCQRSRENWL 309

Query: 83  EGGDANTHFFHLSTIIQRRYNSIDRL 6
           + GD NT +FH     +RR N I  L
Sbjct: 310 KAGDKNTSYFHQKATNRRRRNIIKGL 335



 Score = 36.2 bits (82), Expect(2) = 1e-16
 Identities = 26/89 (29%), Positives = 39/89 (43%)
 Frame = -3

Query: 954 VPAIGKS*GLALCWKENLDVQIVVSN*WIINYLGFNDPPSQLWQFTYVYDPTRSSLKHLF 775
           V + G S GLAL WKE +DV +   +   I+    ++     W+ T  Y       +   
Sbjct: 16  VSSRGYSGGLALLWKEEVDVHVCAFSDHFIDVKIGSNGGGDRWRLTVFYGFPAVQDREKS 75

Query: 774 WAALKDLVGAFSGP*MILGDFNCICSQNK 688
           W  L  L      P + +GDFN I S ++
Sbjct: 76  WILLDQLGHHNQLPWLCVGDFNEILSTDE 104


>emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1389

 Score = 72.4 bits (176), Expect(2) = 3e-16
 Identities = 53/212 (25%), Positives = 81/212 (38%), Gaps = 12/212 (5%)
 Frame = -1

Query: 614 LGFSRNPFSWNNKRADDDNIQERLDRGMTNDLWRVLFPQAVVSHLTTIXXXXXXXXXXXX 435
           + F+   F+W  K+   +NI ERLDRG+ +  W +LFP A + H                
Sbjct: 178 ISFTGQIFTWRKKKDGPNNIHERLDRGVASTSWLMLFPHAFLKHHIFTSSDHCQISLEYL 237

Query: 434 XXXXXXXXPFRFEAMRTMDDSIGSVIDSSWRGDVSGTPLFKLTSKLKNLKAVLKSWNKSV 255
                   PFRFE M        S++  +W     G+ +F    K K +K   K WNK+ 
Sbjct: 238 ANNKSKAPPFRFEKMWCTRKDYDSLVKRTWCTKFYGSHMFNFVQKCKLVKINSKEWNKTQ 297

Query: 254 FGHI------------KYSISILRGEXXXXXXXXXSFIL*KENHYQXXXXXXXXXXXLMW 111
           FG+I            +   ++L               L K N                W
Sbjct: 298 FGNIFRQLRQVDERLEEIQRNLLIDHNNTSLKTQQELFLAKRN-------KLLEYNTTYW 350

Query: 110 REKPKQRWLEGGDANTHFFHLSTIIQRRYNSI 15
           ++K K  ++  GD N+ F+H    I++  N I
Sbjct: 351 KQKCKSDFMVLGDTNSKFYHTHASIRKYRNQI 382



 Score = 40.4 bits (93), Expect(2) = 3e-16
 Identities = 36/115 (31%), Positives = 50/115 (43%), Gaps = 13/115 (11%)
 Frame = -3

Query: 972 FHHSHVVPAIGKS*GLALCWKENL-----------DVQIVVSN*WIINYLGFNDPPSQLW 826
           F H   +PA+G S GL L W++ +            V+ +  +   IN L  N       
Sbjct: 53  FLHHDSIPAMGYSGGLWLFWRDCILNPFSLVVIYKSVRFIACS---INLLNQN------L 103

Query: 825 QFT--YVYDPTRSSLKHLFWAALKDLVGAFSGP*MILGDFNCICSQNKNREDALF 667
           QF   ++Y P +   K  FW  L   V + S P +ILGDFN I S +     A F
Sbjct: 104 QFVAIFIYAPAQKEFKSSFWDELIAYVSSLSFPFIILGDFNEINSPSDKLGGAPF 158


>gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1656

 Score = 74.7 bits (182), Expect(2) = 4e-16
 Identities = 54/203 (26%), Positives = 76/203 (37%)
 Frame = -1

Query: 614  LGFSRNPFSWNNKRADDDNIQERLDRGMTNDLWRVLFPQAVVSHLTTIXXXXXXXXXXXX 435
            L F    FSW   R     I+ERLDR + N  W    P   + HL  I            
Sbjct: 778  LHFKGPGFSWFAMRHGRVFIKERLDRALGNIAWSSSQPNTQILHLPKIGSDHRPLLLDSN 837

Query: 434  XXXXXXXXPFRFEAMRTMDDSIGSVIDSSWRGDVSGTPLFKLTSKLKNLKAVLKSWNKSV 255
                     FRFE M T  +    VI  SW     G+ +      L +    LK W+K  
Sbjct: 838  PKMLNKTRLFRFEQMWTTHEEYSDVIQRSWPPAFGGSAMRSWNRNLLSCGKALKMWSKEK 897

Query: 254  FGHIKYSISILRGEXXXXXXXXXSFIL*KENHYQXXXXXXXXXXXLMWREKPKQRWLEGG 75
            F +    ++ L  +              + N              + W ++ +  WL+ G
Sbjct: 898  FSNPSVQVADLLSDIEKLHQSNPPDAHHQINILTDQVTKLWTQDEMYWHQRSRVNWLKLG 957

Query: 74   DANTHFFHLSTIIQRRYNSIDRL 6
            D N+ FFH +TI +R+YN I RL
Sbjct: 958  DQNSSFFHQTTIQRRQYNKIVRL 980



 Score = 37.7 bits (86), Expect(2) = 4e-16
 Identities = 25/88 (28%), Positives = 41/88 (46%)
 Frame = -3

Query: 972 FHHSHVVPAIGKS*GLALCWKENLDVQIVVSN*WIINYLGFNDPPSQLWQFTYVYDPTRS 793
           F   HVV  I    GLAL W + + V I+ S+   ++ +      + + + T++Y     
Sbjct: 657 FTDHHVVDPIATGRGLALFWGDAVQVSILDSSPNYVDTVVSFLSDAFVCKITWMYGNPHD 716

Query: 792 SLKHLFWAALKDLVGAFSGP*MILGDFN 709
           + K  FW  +       S P ++LGDFN
Sbjct: 717 NEKRAFWRLMYSRFPVQSLPWLVLGDFN 744


>ref|XP_002450843.1| hypothetical protein SORBIDRAFT_05g019526 [Sorghum bicolor]
            gi|241936686|gb|EES09831.1| hypothetical protein
            SORBIDRAFT_05g019526 [Sorghum bicolor]
          Length = 1209

 Score = 73.9 bits (180), Expect(2) = 6e-16
 Identities = 52/206 (25%), Positives = 79/206 (38%), Gaps = 3/206 (1%)
 Frame = -1

Query: 614  LGFSRNPFSWNNKRADDDNIQERLDRGMTNDLWRVLFPQAVVSHLTTIXXXXXXXXXXXX 435
            LG+    +++  K       + RLDR +    W   FP A V H+T              
Sbjct: 437  LGYEGRSWTYEKKVTGGSFCRVRLDRALATPEWSARFPLAKVRHITAAASDHGPIVLQWE 496

Query: 434  XXXXXXXXP--FRFEAMRTMDDSIGSVIDSSWRGDVSGTPLFKLTSKLKNLKAVLKSWNK 261
                       FR+E M    +   +VI  +W+     T   +L SKL+++   L  W  
Sbjct: 497  AAQGRQRQRRQFRYETMWETHEDFANVISQTWQRGTKATTAHELQSKLRSVSCKLNHWEV 556

Query: 260  SVFGHIKYSISILRGE-XXXXXXXXXSFIL*KENHYQXXXXXXXXXXXLMWREKPKQRWL 84
              FG +   +  LR E                E   +           LMW+++ + +WL
Sbjct: 557  RTFGQVSRELKGLRRELEMMQADVNRQGPSHVELKIKERIMELNHREELMWKQRARIQWL 616

Query: 83   EGGDANTHFFHLSTIIQRRYNSIDRL 6
              GD NTHFFHL    +R+ N I +L
Sbjct: 617  SAGDKNTHFFHLRASRRRKRNMIVKL 642



 Score = 37.7 bits (86), Expect(2) = 6e-16
 Identities = 21/86 (24%), Positives = 45/86 (52%)
 Frame = -3

Query: 942 GKS*GLALCWKENLDVQIVVSN*WIINYLGFNDPPSQLWQFTYVYDPTRSSLKHLFWAAL 763
           G+S GL + W   + VQ++  + + I+ +  ++  +  W+ T VY   +   ++  W  L
Sbjct: 327 GRSGGLGIFWNNKISVQLLPYSKYHIDVI-ISEGSADPWRLTCVYGEAQIVERYKTWDML 385

Query: 762 KDLVGAFSGP*MILGDFNCICSQNKN 685
           K +    S P + +GDFN +  ++++
Sbjct: 386 KSIKPNSSLPWVCIGDFNEVLHRSEH 411