BLASTX nr result

ID: Catharanthus23_contig00015513 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00015513
         (563 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524829.1| bromodomain-containing protein, putative [Ri...    59   8e-07
ref|XP_002317311.1| DNA-binding bromodomain-containing family pr...    59   1e-06
ref|XP_006355569.1| PREDICTED: transcription factor GTE12-like [...    58   1e-06
ref|XP_002530855.1| bromodomain-containing protein, putative [Ri...    58   1e-06
gb|EMJ13574.1| hypothetical protein PRUPE_ppa003707mg [Prunus pe...    56   7e-06

>ref|XP_002524829.1| bromodomain-containing protein, putative [Ricinus communis]
           gi|223535889|gb|EEF37549.1| bromodomain-containing
           protein, putative [Ricinus communis]
          Length = 515

 Score = 58.9 bits (141), Expect = 8e-07
 Identities = 38/81 (46%), Positives = 53/81 (65%)
 Frame = -2

Query: 562 KMERTVELEDNMKILRELERLSQCSSSEFSLAFGVRIGKQIAGVRSPLELIGLYIKXXXX 383
           KME+T E+E N++I++ELE+LS CS S +S +FG R G + A   S LE +GL +K    
Sbjct: 441 KMEKTAEIEQNIEIIKELEKLSGCSLS-YSYSFG-RRGPEGAHSCSLLERLGLIMK---- 494

Query: 382 XXXXXXXEQILNGDTEEGEII 320
                  ++ILNGD EEGEI+
Sbjct: 495 -DDIVDDDEILNGDVEEGEIL 514


>ref|XP_002317311.1| DNA-binding bromodomain-containing family protein [Populus
           trichocarpa] gi|222860376|gb|EEE97923.1| DNA-binding
           bromodomain-containing family protein [Populus
           trichocarpa]
          Length = 567

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 39/87 (44%), Positives = 51/87 (58%), Gaps = 6/87 (6%)
 Frame = -2

Query: 562 KMERTVELEDNMKILRELERLSQCSSSEFSLAFG------VRIGKQIAGVRSPLELIGLY 401
           KME+TVE+E N+ I RELERL  CS S F   FG      V+ G+  A + SPLE +GL+
Sbjct: 484 KMEKTVEIEQNLDIQRELERLCGCSIS-FDFRFGSGKMEVVKKGEIGACIGSPLERLGLF 542

Query: 400 IKXXXXXXXXXXXEQILNGDTEEGEII 320
           +K            + L+GD EEGEI+
Sbjct: 543 MK---DDIEDEDGGEFLDGDGEEGEIL 566


>ref|XP_006355569.1| PREDICTED: transcription factor GTE12-like [Solanum tuberosum]
          Length = 606

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 36/81 (44%), Positives = 47/81 (58%)
 Frame = -2

Query: 562 KMERTVELEDNMKILRELERLSQCSSSEFSLAFGVRIGKQIAGVRSPLELIGLYIKXXXX 383
           KMERTVE EDN+KILR+LE+L +C S   +L+ G   G  I    +PLE +GL IK    
Sbjct: 527 KMERTVEFEDNLKILRDLEKLCKCCSEAENLS-GNGDGFTIILGENPLERLGLCIKEDYL 585

Query: 382 XXXXXXXEQILNGDTEEGEII 320
                    +  GD E+GEI+
Sbjct: 586 YDDEDEDAILSGGDWEDGEIL 606


>ref|XP_002530855.1| bromodomain-containing protein, putative [Ricinus communis]
           gi|223529579|gb|EEF31529.1| bromodomain-containing
           protein, putative [Ricinus communis]
          Length = 536

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 38/81 (46%), Positives = 52/81 (64%)
 Frame = -2

Query: 562 KMERTVELEDNMKILRELERLSQCSSSEFSLAFGVRIGKQIAGVRSPLELIGLYIKXXXX 383
           KME T E+E N++I++ELE+LS CS S +S +FG R G + A   S LE +GL +K    
Sbjct: 462 KMENTAEIEQNIEIIKELEKLSGCSLS-YSYSFG-RRGPEGAHSCSLLERLGLIMK---- 515

Query: 382 XXXXXXXEQILNGDTEEGEII 320
                  ++ILNGD EEGEI+
Sbjct: 516 -DDIVDDDEILNGDVEEGEIL 535


>gb|EMJ13574.1| hypothetical protein PRUPE_ppa003707mg [Prunus persica]
          Length = 555

 Score = 55.8 bits (133), Expect = 7e-06
 Identities = 40/82 (48%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
 Frame = -2

Query: 562 KMERTVELEDNMKILRELERLSQCSSSEFSLAFGVRIGK-QIAGVRSPLELIGLYIKXXX 386
           KM+RTVE++ N+KIL ELERL+  S S   L    R G    A +RSPLE +GL+IK   
Sbjct: 475 KMQRTVEIDQNLKILEELERLTGFSPSTPLLNCKSRSGAFGGAHLRSPLEQLGLFIK-AE 533

Query: 385 XXXXXXXXEQILNGDTEEGEII 320
                   E ILN D EEGEI+
Sbjct: 534 YSGDEDDDESILNEDGEEGEIV 555


Top