BLASTX nr result
ID: Catharanthus23_contig00015513
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Catharanthus23_contig00015513 (563 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002524829.1| bromodomain-containing protein, putative [Ri... 59 8e-07 ref|XP_002317311.1| DNA-binding bromodomain-containing family pr... 59 1e-06 ref|XP_006355569.1| PREDICTED: transcription factor GTE12-like [... 58 1e-06 ref|XP_002530855.1| bromodomain-containing protein, putative [Ri... 58 1e-06 gb|EMJ13574.1| hypothetical protein PRUPE_ppa003707mg [Prunus pe... 56 7e-06 >ref|XP_002524829.1| bromodomain-containing protein, putative [Ricinus communis] gi|223535889|gb|EEF37549.1| bromodomain-containing protein, putative [Ricinus communis] Length = 515 Score = 58.9 bits (141), Expect = 8e-07 Identities = 38/81 (46%), Positives = 53/81 (65%) Frame = -2 Query: 562 KMERTVELEDNMKILRELERLSQCSSSEFSLAFGVRIGKQIAGVRSPLELIGLYIKXXXX 383 KME+T E+E N++I++ELE+LS CS S +S +FG R G + A S LE +GL +K Sbjct: 441 KMEKTAEIEQNIEIIKELEKLSGCSLS-YSYSFG-RRGPEGAHSCSLLERLGLIMK---- 494 Query: 382 XXXXXXXEQILNGDTEEGEII 320 ++ILNGD EEGEI+ Sbjct: 495 -DDIVDDDEILNGDVEEGEIL 514 >ref|XP_002317311.1| DNA-binding bromodomain-containing family protein [Populus trichocarpa] gi|222860376|gb|EEE97923.1| DNA-binding bromodomain-containing family protein [Populus trichocarpa] Length = 567 Score = 58.5 bits (140), Expect = 1e-06 Identities = 39/87 (44%), Positives = 51/87 (58%), Gaps = 6/87 (6%) Frame = -2 Query: 562 KMERTVELEDNMKILRELERLSQCSSSEFSLAFG------VRIGKQIAGVRSPLELIGLY 401 KME+TVE+E N+ I RELERL CS S F FG V+ G+ A + SPLE +GL+ Sbjct: 484 KMEKTVEIEQNLDIQRELERLCGCSIS-FDFRFGSGKMEVVKKGEIGACIGSPLERLGLF 542 Query: 400 IKXXXXXXXXXXXEQILNGDTEEGEII 320 +K + L+GD EEGEI+ Sbjct: 543 MK---DDIEDEDGGEFLDGDGEEGEIL 566 >ref|XP_006355569.1| PREDICTED: transcription factor GTE12-like [Solanum tuberosum] Length = 606 Score = 58.2 bits (139), Expect = 1e-06 Identities = 36/81 (44%), Positives = 47/81 (58%) Frame = -2 Query: 562 KMERTVELEDNMKILRELERLSQCSSSEFSLAFGVRIGKQIAGVRSPLELIGLYIKXXXX 383 KMERTVE EDN+KILR+LE+L +C S +L+ G G I +PLE +GL IK Sbjct: 527 KMERTVEFEDNLKILRDLEKLCKCCSEAENLS-GNGDGFTIILGENPLERLGLCIKEDYL 585 Query: 382 XXXXXXXEQILNGDTEEGEII 320 + GD E+GEI+ Sbjct: 586 YDDEDEDAILSGGDWEDGEIL 606 >ref|XP_002530855.1| bromodomain-containing protein, putative [Ricinus communis] gi|223529579|gb|EEF31529.1| bromodomain-containing protein, putative [Ricinus communis] Length = 536 Score = 58.2 bits (139), Expect = 1e-06 Identities = 38/81 (46%), Positives = 52/81 (64%) Frame = -2 Query: 562 KMERTVELEDNMKILRELERLSQCSSSEFSLAFGVRIGKQIAGVRSPLELIGLYIKXXXX 383 KME T E+E N++I++ELE+LS CS S +S +FG R G + A S LE +GL +K Sbjct: 462 KMENTAEIEQNIEIIKELEKLSGCSLS-YSYSFG-RRGPEGAHSCSLLERLGLIMK---- 515 Query: 382 XXXXXXXEQILNGDTEEGEII 320 ++ILNGD EEGEI+ Sbjct: 516 -DDIVDDDEILNGDVEEGEIL 535 >gb|EMJ13574.1| hypothetical protein PRUPE_ppa003707mg [Prunus persica] Length = 555 Score = 55.8 bits (133), Expect = 7e-06 Identities = 40/82 (48%), Positives = 49/82 (59%), Gaps = 1/82 (1%) Frame = -2 Query: 562 KMERTVELEDNMKILRELERLSQCSSSEFSLAFGVRIGK-QIAGVRSPLELIGLYIKXXX 386 KM+RTVE++ N+KIL ELERL+ S S L R G A +RSPLE +GL+IK Sbjct: 475 KMQRTVEIDQNLKILEELERLTGFSPSTPLLNCKSRSGAFGGAHLRSPLEQLGLFIK-AE 533 Query: 385 XXXXXXXXEQILNGDTEEGEII 320 E ILN D EEGEI+ Sbjct: 534 YSGDEDDDESILNEDGEEGEIV 555