BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00014940
         (538 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004234342.1| PREDICTED: pentatricopeptide repeat-containi...    85   1e-14
ref|XP_006351545.1| PREDICTED: pentatricopeptide repeat-containi...    82   6e-14
ref|XP_002266598.1| PREDICTED: pentatricopeptide repeat-containi...    81   1e-13
emb|CAN68456.1| hypothetical protein VITISV_025676 [Vitis vinifera]    81   1e-13
gb|EOY09866.1| Tetratricopeptide repeat-like superfamily protein...    61   1e-07
gb|EOY09865.1| Tetratricopeptide repeat-like superfamily protein...    61   1e-07
gb|EOY09864.1| Tetratricopeptide repeat-like superfamily protein...    61   1e-07

>ref|XP_004234342.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
           mitochondrial-like [Solanum lycopersicum]
          Length = 533

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 41/73 (56%), Positives = 53/73 (72%), Gaps = 2/73 (2%)
 Frame = -3

Query: 218 LTSFRNLLEKYGKHQALVEQIHGQSTTLGLLCYQH--FACKLLNTYSKLNKPFEGQKVFN 45
           +T+ + LL+K   H+ L++QIH QS TLGLL   H  FACKLLN Y+KLNKP    KVF+
Sbjct: 12  VTTLKRLLDKCINHENLIKQIHAQSITLGLLTQSHQSFACKLLNVYAKLNKPVAAHKVFD 71

Query: 44  EISKPDIVSWTSL 6
           +I +PDIVSW+ L
Sbjct: 72  QIPQPDIVSWSCL 84


>ref|XP_006351545.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
           mitochondrial-like [Solanum tuberosum]
          Length = 533

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 39/72 (54%), Positives = 52/72 (72%), Gaps = 2/72 (2%)
 Frame = -3

Query: 215 TSFRNLLEKYGKHQALVEQIHGQSTTLGLLC--YQHFACKLLNTYSKLNKPFEGQKVFNE 42
           T+ + LL+K   H+ L++QIH QS T G+    +Q FACKLLN Y+KLNKPF   KVF++
Sbjct: 13  TTLKRLLDKCISHENLIQQIHAQSITCGIFTQFHQSFACKLLNIYAKLNKPFSAYKVFDQ 72

Query: 41  ISKPDIVSWTSL 6
           I +PDIVSW+ L
Sbjct: 73  IPQPDIVSWSCL 84


>ref|XP_002266598.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic [Vitis vinifera]
           gi|297742795|emb|CBI35475.3| unnamed protein product
           [Vitis vinifera]
          Length = 517

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 42/71 (59%), Positives = 51/71 (71%), Gaps = 2/71 (2%)
 Frame = -3

Query: 212 SFRNLLEKYGKHQALVEQIHGQSTTLGLLCY--QHFACKLLNTYSKLNKPFEGQKVFNEI 39
           +F  LL+K G  + L +QIHG++ TLGLLC   QH ACKLLNTY++L  P + QKVFN I
Sbjct: 5   TFYFLLQKCGSLEKL-KQIHGKAVTLGLLCSKRQHLACKLLNTYTQLGSPVDAQKVFNHI 63

Query: 38  SKPDIVSWTSL 6
             PDIVSWT L
Sbjct: 64  QNPDIVSWTCL 74


>emb|CAN68456.1| hypothetical protein VITISV_025676 [Vitis vinifera]
          Length = 768

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 42/71 (59%), Positives = 51/71 (71%), Gaps = 2/71 (2%)
 Frame = -3

Query: 212 SFRNLLEKYGKHQALVEQIHGQSTTLGLLCY--QHFACKLLNTYSKLNKPFEGQKVFNEI 39
           +F  LL+K G  + L +QIHG++ TLGLLC   QH ACKLLNTY++L  P + QKVFN I
Sbjct: 256 TFYFLLQKCGSLEKL-KQIHGKAVTLGLLCSKRQHLACKLLNTYTQLGSPVDAQKVFNHI 314

Query: 38  SKPDIVSWTSL 6
             PDIVSWT L
Sbjct: 315 QNPDIVSWTCL 325


>gb|EOY09866.1| Tetratricopeptide repeat-like superfamily protein, putative isoform
           3 [Theobroma cacao]
          Length = 589

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 33/68 (48%), Positives = 45/68 (66%), Gaps = 2/68 (2%)
 Frame = -3

Query: 203 NLLEKYGKHQALVEQIHGQSTTLGLLCY--QHFACKLLNTYSKLNKPFEGQKVFNEISKP 30
           +LLEK    + L ++IH  +TTLGLL    Q  +CK+L TY+ LN P +  + FN+I +P
Sbjct: 9   SLLEKCPNLKNL-KKIHAHATTLGLLQNHNQALSCKILTTYANLNNPDDANRTFNQIQRP 67

Query: 29  DIVSWTSL 6
           DIVSWT L
Sbjct: 68  DIVSWTCL 75


>gb|EOY09865.1| Tetratricopeptide repeat-like superfamily protein, putative isoform
           2 [Theobroma cacao]
          Length = 587

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 33/68 (48%), Positives = 45/68 (66%), Gaps = 2/68 (2%)
 Frame = -3

Query: 203 NLLEKYGKHQALVEQIHGQSTTLGLLCY--QHFACKLLNTYSKLNKPFEGQKVFNEISKP 30
           +LLEK    + L ++IH  +TTLGLL    Q  +CK+L TY+ LN P +  + FN+I +P
Sbjct: 9   SLLEKCPNLKNL-KKIHAHATTLGLLQNHNQALSCKILTTYANLNNPDDANRTFNQIQRP 67

Query: 29  DIVSWTSL 6
           DIVSWT L
Sbjct: 68  DIVSWTCL 75


>gb|EOY09864.1| Tetratricopeptide repeat-like superfamily protein, putative isoform
           1 [Theobroma cacao]
          Length = 649

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 33/68 (48%), Positives = 45/68 (66%), Gaps = 2/68 (2%)
 Frame = -3

Query: 203 NLLEKYGKHQALVEQIHGQSTTLGLLCY--QHFACKLLNTYSKLNKPFEGQKVFNEISKP 30
           +LLEK    + L ++IH  +TTLGLL    Q  +CK+L TY+ LN P +  + FN+I +P
Sbjct: 9   SLLEKCPNLKNL-KKIHAHATTLGLLQNHNQALSCKILTTYANLNNPDDANRTFNQIQRP 67

Query: 29  DIVSWTSL 6
           DIVSWT L
Sbjct: 68  DIVSWTCL 75