BLASTX nr result

ID: Catharanthus23_contig00014755 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00014755
         (238 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513087.1| U3 small nucleolar ribonucleoprotein protein...   144   1e-32
ref|XP_004143747.1| PREDICTED: U3 small nucleolar ribonucleoprot...   142   6e-32
ref|XP_006438885.1| hypothetical protein CICLE_v10032276mg [Citr...   140   1e-31
ref|XP_004250954.1| PREDICTED: U3 small nucleolar ribonucleoprot...   140   2e-31
ref|XP_004228585.1| PREDICTED: U3 small nucleolar ribonucleoprot...   140   2e-31
gb|EOY17624.1| Ribosomal RNA processing Brix domain protein isof...   139   4e-31
gb|EMJ20022.1| hypothetical protein PRUPE_ppa010121mg [Prunus pe...   139   4e-31
ref|XP_002265279.1| PREDICTED: U3 small nucleolar ribonucleoprot...   139   4e-31
ref|XP_006348480.1| PREDICTED: U3 small nucleolar ribonucleoprot...   139   5e-31
gb|ESW20979.1| hypothetical protein PHAVU_005G031000g [Phaseolus...   138   9e-31
ref|XP_002304782.1| brix domain-containing family protein [Popul...   138   9e-31
gb|ABK93432.1| unknown [Populus trichocarpa]                          138   9e-31
ref|NP_001242221.1| uncharacterized protein LOC100814677 [Glycin...   137   1e-30
ref|XP_004499820.1| PREDICTED: U3 small nucleolar ribonucleoprot...   136   3e-30
ref|XP_003598694.1| U3 small nucleolar ribonucleoprotein IMP4 [M...   136   3e-30
ref|NP_001242782.1| uncharacterized protein LOC100803810 [Glycin...   136   3e-30
gb|EXB37535.1| hypothetical protein L484_004066 [Morus notabilis]     136   3e-30
ref|XP_002297757.2| brix domain-containing family protein [Popul...   136   3e-30
ref|XP_006836257.1| hypothetical protein AMTR_s00101p00134540 [A...   135   4e-30
gb|EMJ19956.1| hypothetical protein PRUPE_ppa009426mg [Prunus pe...   134   1e-29

>ref|XP_002513087.1| U3 small nucleolar ribonucleoprotein protein imp4, putative
           [Ricinus communis] gi|223548098|gb|EEF49590.1| U3 small
           nucleolar ribonucleoprotein protein imp4, putative
           [Ricinus communis]
          Length = 293

 Score =  144 bits (363), Expect = 1e-32
 Identities = 66/78 (84%), Positives = 72/78 (92%)
 Frame = -3

Query: 236 TAYFGLYNVVTRHDIKDKKSVGTMPEAYPHLIFNSFTTKIGERTANILKHLFPGPKLDTK 57
           TAYFGL NVVTRHDIKDKK++GTMPEAYPHLI N+F TK+GERTAN+LKHLFP PK+D K
Sbjct: 159 TAYFGLLNVVTRHDIKDKKAIGTMPEAYPHLILNNFKTKLGERTANVLKHLFPMPKIDAK 218

Query: 56  RIITFATQSDYISFRHHI 3
           RIITFA QSDYISFRHHI
Sbjct: 219 RIITFANQSDYISFRHHI 236


>ref|XP_004143747.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4-like
           [Cucumis sativus]
          Length = 293

 Score =  142 bits (357), Expect = 6e-32
 Identities = 64/78 (82%), Positives = 73/78 (93%)
 Frame = -3

Query: 236 TAYFGLYNVVTRHDIKDKKSVGTMPEAYPHLIFNSFTTKIGERTANILKHLFPGPKLDTK 57
           TAYFGL NVVTRH+I+DKK++GTMPEAYPH+I N+FTTK+GERTANILKHLFP PK DTK
Sbjct: 159 TAYFGLLNVVTRHEIRDKKTMGTMPEAYPHIILNNFTTKLGERTANILKHLFPVPKPDTK 218

Query: 56  RIITFATQSDYISFRHHI 3
           R++TFA QSDYISFRHHI
Sbjct: 219 RVVTFANQSDYISFRHHI 236


>ref|XP_006438885.1| hypothetical protein CICLE_v10032276mg [Citrus clementina]
           gi|568858914|ref|XP_006482988.1| PREDICTED: U3 small
           nucleolar ribonucleoprotein protein IMP4-like [Citrus
           sinensis] gi|557541081|gb|ESR52125.1| hypothetical
           protein CICLE_v10032276mg [Citrus clementina]
          Length = 293

 Score =  140 bits (354), Expect = 1e-31
 Identities = 65/78 (83%), Positives = 72/78 (92%)
 Frame = -3

Query: 236 TAYFGLYNVVTRHDIKDKKSVGTMPEAYPHLIFNSFTTKIGERTANILKHLFPGPKLDTK 57
           TAYFGL NVVTRHDIKD+K++GTMPEAYPHLI ++F +K+GERTANILKHLFP PK DTK
Sbjct: 159 TAYFGLLNVVTRHDIKDRKAIGTMPEAYPHLILDNFKSKLGERTANILKHLFPVPKADTK 218

Query: 56  RIITFATQSDYISFRHHI 3
           RIITFA QSDYISFRHHI
Sbjct: 219 RIITFANQSDYISFRHHI 236


>ref|XP_004250954.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4-like
           [Solanum lycopersicum]
          Length = 293

 Score =  140 bits (352), Expect = 2e-31
 Identities = 65/78 (83%), Positives = 71/78 (91%)
 Frame = -3

Query: 236 TAYFGLYNVVTRHDIKDKKSVGTMPEAYPHLIFNSFTTKIGERTANILKHLFPGPKLDTK 57
           TAYFGL NVVTRHDIKDKKS+GTM EAYPHLIF+ F+TK+GERT NILKHLFP PK DTK
Sbjct: 159 TAYFGLLNVVTRHDIKDKKSMGTMSEAYPHLIFDKFSTKLGERTVNILKHLFPVPKPDTK 218

Query: 56  RIITFATQSDYISFRHHI 3
           RI+TFA QSDYISFRHH+
Sbjct: 219 RILTFANQSDYISFRHHV 236


>ref|XP_004228585.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4-like
           [Solanum lycopersicum]
          Length = 293

 Score =  140 bits (352), Expect = 2e-31
 Identities = 65/78 (83%), Positives = 71/78 (91%)
 Frame = -3

Query: 236 TAYFGLYNVVTRHDIKDKKSVGTMPEAYPHLIFNSFTTKIGERTANILKHLFPGPKLDTK 57
           TAYFGL NVVTRHDIKDKKS+GTM EAYPHLIF+ F+TK+GERT NILKHLFP PK DTK
Sbjct: 159 TAYFGLLNVVTRHDIKDKKSMGTMSEAYPHLIFDKFSTKLGERTVNILKHLFPVPKPDTK 218

Query: 56  RIITFATQSDYISFRHHI 3
           RI+TFA QSDYISFRHH+
Sbjct: 219 RILTFANQSDYISFRHHV 236


>gb|EOY17624.1| Ribosomal RNA processing Brix domain protein isoform 1 [Theobroma
           cacao]
          Length = 302

 Score =  139 bits (350), Expect = 4e-31
 Identities = 65/78 (83%), Positives = 71/78 (91%)
 Frame = -3

Query: 236 TAYFGLYNVVTRHDIKDKKSVGTMPEAYPHLIFNSFTTKIGERTANILKHLFPGPKLDTK 57
           TAYFGL NVVTRHDIKDKK++G MPEAYPHLI ++F TK+GERTANILKHLFP PK DTK
Sbjct: 159 TAYFGLLNVVTRHDIKDKKAIGKMPEAYPHLIHDNFGTKLGERTANILKHLFPVPKPDTK 218

Query: 56  RIITFATQSDYISFRHHI 3
           RI+TFA QSDYISFRHHI
Sbjct: 219 RIVTFANQSDYISFRHHI 236


>gb|EMJ20022.1| hypothetical protein PRUPE_ppa010121mg [Prunus persica]
          Length = 263

 Score =  139 bits (350), Expect = 4e-31
 Identities = 65/77 (84%), Positives = 70/77 (90%)
 Frame = -3

Query: 236 TAYFGLYNVVTRHDIKDKKSVGTMPEAYPHLIFNSFTTKIGERTANILKHLFPGPKLDTK 57
           TAYF L NVVTRHDIKDKK++GTMP+ YPHLI N+FTTK+GERTANILKHLFP PK DTK
Sbjct: 159 TAYFQLLNVVTRHDIKDKKTMGTMPQVYPHLILNNFTTKLGERTANILKHLFPVPKQDTK 218

Query: 56  RIITFATQSDYISFRHH 6
           RIITFA QSDYISFRHH
Sbjct: 219 RIITFANQSDYISFRHH 235


>ref|XP_002265279.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4 [Vitis
           vinifera] gi|147790699|emb|CAN61017.1| hypothetical
           protein VITISV_041221 [Vitis vinifera]
           gi|296081284|emb|CBI17728.3| unnamed protein product
           [Vitis vinifera]
          Length = 293

 Score =  139 bits (350), Expect = 4e-31
 Identities = 64/78 (82%), Positives = 71/78 (91%)
 Frame = -3

Query: 236 TAYFGLYNVVTRHDIKDKKSVGTMPEAYPHLIFNSFTTKIGERTANILKHLFPGPKLDTK 57
           TAYFGL NVVTRHDIKDKK++G M EAYPHLI N+F+TK+GERTANILKHLFP PK DTK
Sbjct: 159 TAYFGLLNVVTRHDIKDKKAIGKMSEAYPHLILNNFSTKLGERTANILKHLFPVPKPDTK 218

Query: 56  RIITFATQSDYISFRHHI 3
           RIITFA QSDY+SFRHH+
Sbjct: 219 RIITFANQSDYVSFRHHV 236


>ref|XP_006348480.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4-like
           [Solanum tuberosum]
          Length = 293

 Score =  139 bits (349), Expect = 5e-31
 Identities = 64/78 (82%), Positives = 71/78 (91%)
 Frame = -3

Query: 236 TAYFGLYNVVTRHDIKDKKSVGTMPEAYPHLIFNSFTTKIGERTANILKHLFPGPKLDTK 57
           TAYFGL NVVTRHDIKDKKS+GTM EAYPHLIF+ F+TK+G+RT NILKHLFP PK DTK
Sbjct: 159 TAYFGLLNVVTRHDIKDKKSMGTMSEAYPHLIFDKFSTKLGDRTVNILKHLFPVPKPDTK 218

Query: 56  RIITFATQSDYISFRHHI 3
           RI+TFA QSDYISFRHH+
Sbjct: 219 RILTFANQSDYISFRHHV 236


>gb|ESW20979.1| hypothetical protein PHAVU_005G031000g [Phaseolus vulgaris]
          Length = 293

 Score =  138 bits (347), Expect = 9e-31
 Identities = 61/78 (78%), Positives = 74/78 (94%)
 Frame = -3

Query: 236 TAYFGLYNVVTRHDIKDKKSVGTMPEAYPHLIFNSFTTKIGERTANILKHLFPGPKLDTK 57
           TAYFGL+NVVTRH+IKDKK++GTMPEAYPHL+ ++F++K+GER+ANILKHLFP PK DTK
Sbjct: 159 TAYFGLHNVVTRHEIKDKKAIGTMPEAYPHLVLDNFSSKLGERSANILKHLFPVPKPDTK 218

Query: 56  RIITFATQSDYISFRHHI 3
           RI+TF+ QSDYISFRHHI
Sbjct: 219 RIVTFSNQSDYISFRHHI 236


>ref|XP_002304782.1| brix domain-containing family protein [Populus trichocarpa]
           gi|222842214|gb|EEE79761.1| brix domain-containing
           family protein [Populus trichocarpa]
          Length = 293

 Score =  138 bits (347), Expect = 9e-31
 Identities = 65/78 (83%), Positives = 71/78 (91%)
 Frame = -3

Query: 236 TAYFGLYNVVTRHDIKDKKSVGTMPEAYPHLIFNSFTTKIGERTANILKHLFPGPKLDTK 57
           TAYF L NVVTRHDIKDKK++GTMPEA+PHLI N+F +K+GERTANILKHLFP PK DTK
Sbjct: 159 TAYFELLNVVTRHDIKDKKAIGTMPEAHPHLILNNFKSKLGERTANILKHLFPMPKPDTK 218

Query: 56  RIITFATQSDYISFRHHI 3
           RIITFA QSDYISFRHHI
Sbjct: 219 RIITFANQSDYISFRHHI 236


>gb|ABK93432.1| unknown [Populus trichocarpa]
          Length = 293

 Score =  138 bits (347), Expect = 9e-31
 Identities = 65/78 (83%), Positives = 71/78 (91%)
 Frame = -3

Query: 236 TAYFGLYNVVTRHDIKDKKSVGTMPEAYPHLIFNSFTTKIGERTANILKHLFPGPKLDTK 57
           TAYF L NVVTRHDIKDKK++GTMPEA+PHLI N+F +K+GERTANILKHLFP PK DTK
Sbjct: 159 TAYFELLNVVTRHDIKDKKAIGTMPEAHPHLILNNFKSKLGERTANILKHLFPMPKPDTK 218

Query: 56  RIITFATQSDYISFRHHI 3
           RIITFA QSDYISFRHHI
Sbjct: 219 RIITFANQSDYISFRHHI 236


>ref|NP_001242221.1| uncharacterized protein LOC100814677 [Glycine max]
           gi|255634440|gb|ACU17585.1| unknown [Glycine max]
          Length = 293

 Score =  137 bits (346), Expect = 1e-30
 Identities = 62/78 (79%), Positives = 72/78 (92%)
 Frame = -3

Query: 236 TAYFGLYNVVTRHDIKDKKSVGTMPEAYPHLIFNSFTTKIGERTANILKHLFPGPKLDTK 57
           TAYFGL NVVTRH+IKDKK++GT+PEAYPHLI N+F+TK+G+RTANI+KHLFP PKLDTK
Sbjct: 159 TAYFGLLNVVTRHEIKDKKAIGTIPEAYPHLILNNFSTKLGDRTANIMKHLFPVPKLDTK 218

Query: 56  RIITFATQSDYISFRHHI 3
           RI+ FA QS YISFRHHI
Sbjct: 219 RIVMFANQSGYISFRHHI 236


>ref|XP_004499820.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4-like
           [Cicer arietinum]
          Length = 293

 Score =  136 bits (343), Expect = 3e-30
 Identities = 62/78 (79%), Positives = 73/78 (93%)
 Frame = -3

Query: 236 TAYFGLYNVVTRHDIKDKKSVGTMPEAYPHLIFNSFTTKIGERTANILKHLFPGPKLDTK 57
           TAYFGL NVVTRH+I+DKK++GTMPEAYPHLI ++F+TK+GERTANILK+LFP PK DTK
Sbjct: 159 TAYFGLLNVVTRHEIRDKKAIGTMPEAYPHLILDNFSTKLGERTANILKYLFPVPKPDTK 218

Query: 56  RIITFATQSDYISFRHHI 3
           RI+TFA +SDYISFRHHI
Sbjct: 219 RIVTFANKSDYISFRHHI 236


>ref|XP_003598694.1| U3 small nucleolar ribonucleoprotein IMP4 [Medicago truncatula]
           gi|355487742|gb|AES68945.1| U3 small nucleolar
           ribonucleoprotein IMP4 [Medicago truncatula]
           gi|388501230|gb|AFK38681.1| unknown [Medicago
           truncatula]
          Length = 291

 Score =  136 bits (343), Expect = 3e-30
 Identities = 62/78 (79%), Positives = 72/78 (92%)
 Frame = -3

Query: 236 TAYFGLYNVVTRHDIKDKKSVGTMPEAYPHLIFNSFTTKIGERTANILKHLFPGPKLDTK 57
           TAYFGL NVVTRH+I+D+K+VGTMPEAYPH+I ++F TK+GERTANILKHLFP PK DTK
Sbjct: 159 TAYFGLLNVVTRHEIRDRKAVGTMPEAYPHIILDNFETKLGERTANILKHLFPVPKPDTK 218

Query: 56  RIITFATQSDYISFRHHI 3
           RI+TFA +SDYISFRHHI
Sbjct: 219 RIVTFANKSDYISFRHHI 236


>ref|NP_001242782.1| uncharacterized protein LOC100803810 [Glycine max]
           gi|255639830|gb|ACU20208.1| unknown [Glycine max]
          Length = 293

 Score =  136 bits (343), Expect = 3e-30
 Identities = 62/78 (79%), Positives = 72/78 (92%)
 Frame = -3

Query: 236 TAYFGLYNVVTRHDIKDKKSVGTMPEAYPHLIFNSFTTKIGERTANILKHLFPGPKLDTK 57
           TAYFGL NVVTRH+IK KK++GTMPEAYPHLI ++F+TK+G+RTANILKHLFP PK DTK
Sbjct: 159 TAYFGLLNVVTRHEIKGKKAIGTMPEAYPHLILDNFSTKLGDRTANILKHLFPVPKPDTK 218

Query: 56  RIITFATQSDYISFRHHI 3
           RI+TF+ QSDYISFRHHI
Sbjct: 219 RIVTFSNQSDYISFRHHI 236


>gb|EXB37535.1| hypothetical protein L484_004066 [Morus notabilis]
          Length = 293

 Score =  136 bits (342), Expect = 3e-30
 Identities = 64/78 (82%), Positives = 69/78 (88%)
 Frame = -3

Query: 236 TAYFGLYNVVTRHDIKDKKSVGTMPEAYPHLIFNSFTTKIGERTANILKHLFPGPKLDTK 57
           TA F L NVVTRHDIKDKK +GTMP+AYPHLI N+FTTK+G RTANILKHLFP PK DTK
Sbjct: 159 TASFQLLNVVTRHDIKDKKGIGTMPQAYPHLILNNFTTKLGARTANILKHLFPVPKPDTK 218

Query: 56  RIITFATQSDYISFRHHI 3
           RIITFA QSDYISFRHH+
Sbjct: 219 RIITFANQSDYISFRHHV 236


>ref|XP_002297757.2| brix domain-containing family protein [Populus trichocarpa]
           gi|550346623|gb|EEE82562.2| brix domain-containing
           family protein [Populus trichocarpa]
          Length = 285

 Score =  136 bits (342), Expect = 3e-30
 Identities = 65/78 (83%), Positives = 70/78 (89%)
 Frame = -3

Query: 236 TAYFGLYNVVTRHDIKDKKSVGTMPEAYPHLIFNSFTTKIGERTANILKHLFPGPKLDTK 57
           TAYF L NVVTRHDIKDKK++GTMPEA PHLI N+F +K+GERTANILKHLFP PK DTK
Sbjct: 151 TAYFELLNVVTRHDIKDKKAIGTMPEAPPHLILNNFKSKLGERTANILKHLFPMPKPDTK 210

Query: 56  RIITFATQSDYISFRHHI 3
           RIITFA QSDYISFRHHI
Sbjct: 211 RIITFANQSDYISFRHHI 228


>ref|XP_006836257.1| hypothetical protein AMTR_s00101p00134540 [Amborella trichopoda]
           gi|548838757|gb|ERM99110.1| hypothetical protein
           AMTR_s00101p00134540 [Amborella trichopoda]
          Length = 293

 Score =  135 bits (341), Expect = 4e-30
 Identities = 63/78 (80%), Positives = 71/78 (91%)
 Frame = -3

Query: 236 TAYFGLYNVVTRHDIKDKKSVGTMPEAYPHLIFNSFTTKIGERTANILKHLFPGPKLDTK 57
           TAYFGL NVVTRHDIKDKK +GTM EAYPHLI ++F++K+GERTANILKHLFP PK D+K
Sbjct: 159 TAYFGLLNVVTRHDIKDKKVIGTMSEAYPHLILHNFSSKLGERTANILKHLFPVPKPDSK 218

Query: 56  RIITFATQSDYISFRHHI 3
           RIITFA QSDYISFRHH+
Sbjct: 219 RIITFANQSDYISFRHHV 236


>gb|EMJ19956.1| hypothetical protein PRUPE_ppa009426mg [Prunus persica]
          Length = 293

 Score =  134 bits (338), Expect = 1e-29
 Identities = 64/77 (83%), Positives = 68/77 (88%)
 Frame = -3

Query: 236 TAYFGLYNVVTRHDIKDKKSVGTMPEAYPHLIFNSFTTKIGERTANILKHLFPGPKLDTK 57
           TAYF L NVVTRHDIKDKK+VGTMP+ YPHLI N+F TK+GERTANILKHLFP  K DTK
Sbjct: 159 TAYFQLLNVVTRHDIKDKKTVGTMPQVYPHLILNNFRTKLGERTANILKHLFPVSKPDTK 218

Query: 56  RIITFATQSDYISFRHH 6
           RIITFA QSDYISFRHH
Sbjct: 219 RIITFANQSDYISFRHH 235


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