BLASTX nr result
ID: Catharanthus23_contig00014574
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00014574
(655 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003531086.1| PREDICTED: uncharacterized LOC100306359 [Gly... 166 7e-39
gb|ADR71256.1| U6 snRNA-associated Sm-like protein LSm5 [Hevea b... 165 1e-38
ref|XP_004504703.1| PREDICTED: U6 snRNA-associated Sm-like prote... 165 1e-38
gb|ESW32667.1| hypothetical protein PHAVU_001G007400g [Phaseolus... 164 2e-38
gb|ESW30956.1| hypothetical protein PHAVU_002G196500g [Phaseolus... 164 2e-38
ref|XP_003524792.1| PREDICTED: uncharacterized LOC100527929 [Gly... 164 2e-38
gb|AFK41754.1| unknown [Lotus japonicus] 163 4e-38
ref|XP_004152020.1| PREDICTED: U6 snRNA-associated Sm-like prote... 163 5e-38
ref|XP_006480202.1| PREDICTED: U6 snRNA-associated Sm-like prote... 162 8e-38
ref|XP_006443648.1| hypothetical protein CICLE_v10022785mg [Citr... 162 8e-38
gb|EMJ02446.1| hypothetical protein PRUPE_ppa013245mg [Prunus pe... 162 1e-37
ref|XP_006395131.1| hypothetical protein EUTSA_v10005202mg [Eutr... 161 2e-37
ref|XP_004288123.1| PREDICTED: U6 snRNA-associated Sm-like prote... 160 2e-37
ref|XP_002299989.1| SUPERSENSITIVE TO ABA AND DROUGHT family pro... 160 2e-37
ref|XP_002285668.1| PREDICTED: U6 snRNA-associated Sm-like prote... 160 2e-37
dbj|BAF01501.1| Sm-like protein [Arabidopsis thaliana] 159 5e-37
ref|NP_199698.1| U6 snRNA-associated Sm-like protein LSM5 [Arabi... 159 7e-37
ref|XP_006279717.1| hypothetical protein CARUB_v10027453mg [Caps... 159 9e-37
ref|XP_004247830.1| PREDICTED: U6 snRNA-associated Sm-like prote... 159 9e-37
ref|XP_002863925.1| hypothetical protein ARALYDRAFT_917817 [Arab... 157 3e-36
>ref|XP_003531086.1| PREDICTED: uncharacterized LOC100306359 [Glycine max]
gi|255628297|gb|ACU14493.1| unknown [Glycine max]
Length = 87
Score = 166 bits (419), Expect = 7e-39
Identities = 83/88 (94%), Positives = 86/88 (97%)
Frame = -2
Query: 597 MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEMTAEGN 418
MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYE+TAEG
Sbjct: 1 MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEG- 59
Query: 417 NRVTKLDQILLNGNNIAILVPGGSPDSE 334
R+TKLDQILLNGNNIAILVPGGSP+SE
Sbjct: 60 RRITKLDQILLNGNNIAILVPGGSPESE 87
>gb|ADR71256.1| U6 snRNA-associated Sm-like protein LSm5 [Hevea brasiliensis]
Length = 87
Score = 165 bits (418), Expect = 1e-38
Identities = 83/88 (94%), Positives = 85/88 (96%)
Frame = -2
Query: 597 MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEMTAEGN 418
MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYE+TAEG
Sbjct: 1 MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEVTAEG- 59
Query: 417 NRVTKLDQILLNGNNIAILVPGGSPDSE 334
R+TKLDQILLNGNNIAILVPGGSPD E
Sbjct: 60 RRITKLDQILLNGNNIAILVPGGSPDPE 87
>ref|XP_004504703.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5-like [Cicer
arietinum] gi|388498294|gb|AFK37213.1| unknown [Medicago
truncatula] gi|508702084|gb|EOX93980.1| Small nuclear
ribonucleoprotein family protein [Theobroma cacao]
Length = 87
Score = 165 bits (418), Expect = 1e-38
Identities = 83/88 (94%), Positives = 85/88 (96%)
Frame = -2
Query: 597 MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEMTAEGN 418
MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYE+TAEG
Sbjct: 1 MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEG- 59
Query: 417 NRVTKLDQILLNGNNIAILVPGGSPDSE 334
R+TKLDQILLNGNNIAILVPGGSPD E
Sbjct: 60 RRITKLDQILLNGNNIAILVPGGSPDPE 87
>gb|ESW32667.1| hypothetical protein PHAVU_001G007400g [Phaseolus vulgaris]
gi|561034138|gb|ESW32668.1| hypothetical protein
PHAVU_001G007400g [Phaseolus vulgaris]
gi|561034139|gb|ESW32669.1| hypothetical protein
PHAVU_001G007400g [Phaseolus vulgaris]
Length = 87
Score = 164 bits (416), Expect = 2e-38
Identities = 82/88 (93%), Positives = 86/88 (97%)
Frame = -2
Query: 597 MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEMTAEGN 418
MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYE+TAEG
Sbjct: 1 MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEG- 59
Query: 417 NRVTKLDQILLNGNNIAILVPGGSPDSE 334
R+TKLDQILLNGNNIAILVPGGSP++E
Sbjct: 60 RRITKLDQILLNGNNIAILVPGGSPETE 87
>gb|ESW30956.1| hypothetical protein PHAVU_002G196500g [Phaseolus vulgaris]
Length = 87
Score = 164 bits (416), Expect = 2e-38
Identities = 82/88 (93%), Positives = 86/88 (97%)
Frame = -2
Query: 597 MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEMTAEGN 418
MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYE+T+EG
Sbjct: 1 MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITSEG- 59
Query: 417 NRVTKLDQILLNGNNIAILVPGGSPDSE 334
R+TKLDQILLNGNNIAILVPGGSP+SE
Sbjct: 60 RRITKLDQILLNGNNIAILVPGGSPESE 87
>ref|XP_003524792.1| PREDICTED: uncharacterized LOC100527929 [Glycine max]
gi|255633598|gb|ACU17158.1| unknown [Glycine max]
Length = 87
Score = 164 bits (415), Expect = 2e-38
Identities = 82/88 (93%), Positives = 85/88 (96%)
Frame = -2
Query: 597 MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEMTAEGN 418
MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVY NMVLEDVTEYE+TAEG
Sbjct: 1 MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYANMVLEDVTEYEITAEG- 59
Query: 417 NRVTKLDQILLNGNNIAILVPGGSPDSE 334
R+TKLDQILLNGNNIAILVPGGSP+SE
Sbjct: 60 RRITKLDQILLNGNNIAILVPGGSPESE 87
>gb|AFK41754.1| unknown [Lotus japonicus]
Length = 87
Score = 163 bits (413), Expect = 4e-38
Identities = 82/88 (93%), Positives = 85/88 (96%)
Frame = -2
Query: 597 MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEMTAEGN 418
MA+NPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYE+TAEG
Sbjct: 1 MASNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEG- 59
Query: 417 NRVTKLDQILLNGNNIAILVPGGSPDSE 334
R+TKLDQILLNGNNIAILVPGGSPD E
Sbjct: 60 RRITKLDQILLNGNNIAILVPGGSPDPE 87
>ref|XP_004152020.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5-like [Cucumis
sativus] gi|449522508|ref|XP_004168268.1| PREDICTED: U6
snRNA-associated Sm-like protein LSm5-like [Cucumis
sativus]
Length = 87
Score = 163 bits (412), Expect = 5e-38
Identities = 82/88 (93%), Positives = 84/88 (95%)
Frame = -2
Query: 597 MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEMTAEGN 418
MA NPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYE+TAEG
Sbjct: 1 MATNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEG- 59
Query: 417 NRVTKLDQILLNGNNIAILVPGGSPDSE 334
R+TKLDQILLNGNNIAILVPGGSPD E
Sbjct: 60 RRITKLDQILLNGNNIAILVPGGSPDPE 87
>ref|XP_006480202.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5-like [Citrus
sinensis]
Length = 87
Score = 162 bits (410), Expect = 8e-38
Identities = 81/88 (92%), Positives = 85/88 (96%)
Frame = -2
Query: 597 MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEMTAEGN 418
MA+NPSQLLPSELIDRCIGSKIWVIMKGDKELVGTL+GFDVYVNMVLEDVTEYE+TAEG
Sbjct: 1 MAHNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLKGFDVYVNMVLEDVTEYEITAEG- 59
Query: 417 NRVTKLDQILLNGNNIAILVPGGSPDSE 334
R+TKLDQILLNGNNIAILVPGGSPD E
Sbjct: 60 RRITKLDQILLNGNNIAILVPGGSPDPE 87
>ref|XP_006443648.1| hypothetical protein CICLE_v10022785mg [Citrus clementina]
gi|557545910|gb|ESR56888.1| hypothetical protein
CICLE_v10022785mg [Citrus clementina]
Length = 138
Score = 162 bits (410), Expect = 8e-38
Identities = 81/88 (92%), Positives = 85/88 (96%)
Frame = -2
Query: 597 MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEMTAEGN 418
MA+NPSQLLPSELIDRCIGSKIWVIMKGDKELVGTL+GFDVYVNMVLEDVTEYE+TAEG
Sbjct: 52 MAHNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLKGFDVYVNMVLEDVTEYEITAEG- 110
Query: 417 NRVTKLDQILLNGNNIAILVPGGSPDSE 334
R+TKLDQILLNGNNIAILVPGGSPD E
Sbjct: 111 RRITKLDQILLNGNNIAILVPGGSPDPE 138
>gb|EMJ02446.1| hypothetical protein PRUPE_ppa013245mg [Prunus persica]
Length = 133
Score = 162 bits (409), Expect = 1e-37
Identities = 81/88 (92%), Positives = 84/88 (95%)
Frame = -2
Query: 597 MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEMTAEGN 418
MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYE+T EG
Sbjct: 47 MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITPEG- 105
Query: 417 NRVTKLDQILLNGNNIAILVPGGSPDSE 334
R+TKLDQILLNGNNIAILVPGGSP+ E
Sbjct: 106 RRITKLDQILLNGNNIAILVPGGSPEPE 133
>ref|XP_006395131.1| hypothetical protein EUTSA_v10005202mg [Eutrema salsugineum]
gi|557091770|gb|ESQ32417.1| hypothetical protein
EUTSA_v10005202mg [Eutrema salsugineum]
Length = 88
Score = 161 bits (407), Expect = 2e-37
Identities = 81/88 (92%), Positives = 84/88 (95%)
Frame = -2
Query: 597 MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEMTAEGN 418
MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVG L+GFDVYVNMVLEDVTEYE+TAEG
Sbjct: 1 MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGILKGFDVYVNMVLEDVTEYEITAEG- 59
Query: 417 NRVTKLDQILLNGNNIAILVPGGSPDSE 334
RVTKLDQILLNGNNIAILVPGGSP+ E
Sbjct: 60 RRVTKLDQILLNGNNIAILVPGGSPEDE 87
>ref|XP_004288123.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5-like [Fragaria
vesca subsp. vesca]
Length = 87
Score = 160 bits (406), Expect = 2e-37
Identities = 80/88 (90%), Positives = 84/88 (95%)
Frame = -2
Query: 597 MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEMTAEGN 418
MANNPS L+PSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYE+TAEG
Sbjct: 1 MANNPSSLMPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEG- 59
Query: 417 NRVTKLDQILLNGNNIAILVPGGSPDSE 334
R+TKLDQILLNGNNIAILVPGGSP+ E
Sbjct: 60 RRITKLDQILLNGNNIAILVPGGSPEVE 87
>ref|XP_002299989.1| SUPERSENSITIVE TO ABA AND DROUGHT family protein [Populus
trichocarpa] gi|224103927|ref|XP_002313247.1|
SUPERSENSITIVE TO ABA AND DROUGHT family protein
[Populus trichocarpa] gi|118484238|gb|ABK93999.1|
unknown [Populus trichocarpa]
gi|222847247|gb|EEE84794.1| SUPERSENSITIVE TO ABA AND
DROUGHT family protein [Populus trichocarpa]
gi|222849655|gb|EEE87202.1| SUPERSENSITIVE TO ABA AND
DROUGHT family protein [Populus trichocarpa]
Length = 88
Score = 160 bits (406), Expect = 2e-37
Identities = 83/89 (93%), Positives = 85/89 (95%), Gaps = 1/89 (1%)
Frame = -2
Query: 597 MAN-NPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEMTAEG 421
MAN NPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYE+TAEG
Sbjct: 1 MANTNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEG 60
Query: 420 NNRVTKLDQILLNGNNIAILVPGGSPDSE 334
R+TKLDQILLNGNNIAILVPGGSPD E
Sbjct: 61 -RRITKLDQILLNGNNIAILVPGGSPDPE 88
>ref|XP_002285668.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 isoform 1
[Vitis vinifera] gi|297741927|emb|CBI33362.3| unnamed
protein product [Vitis vinifera]
Length = 87
Score = 160 bits (406), Expect = 2e-37
Identities = 80/88 (90%), Positives = 84/88 (95%)
Frame = -2
Query: 597 MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEMTAEGN 418
M+ NPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYE+T+EG
Sbjct: 1 MSTNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITSEG- 59
Query: 417 NRVTKLDQILLNGNNIAILVPGGSPDSE 334
R+TKLDQILLNGNNIAILVPGGSPD E
Sbjct: 60 RRITKLDQILLNGNNIAILVPGGSPDPE 87
>dbj|BAF01501.1| Sm-like protein [Arabidopsis thaliana]
Length = 88
Score = 159 bits (403), Expect = 5e-37
Identities = 80/87 (91%), Positives = 84/87 (96%)
Frame = -2
Query: 597 MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEMTAEGN 418
MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVG L+GFDVYVNMVLEDVTEYE+TAEG
Sbjct: 1 MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGILKGFDVYVNMVLEDVTEYEITAEG- 59
Query: 417 NRVTKLDQILLNGNNIAILVPGGSPDS 337
RVTKLDQILLNGNNIAILVPGGSP++
Sbjct: 60 RRVTKLDQILLNGNNIAILVPGGSPEN 86
>ref|NP_199698.1| U6 snRNA-associated Sm-like protein LSM5 [Arabidopsis thaliana]
gi|9758886|dbj|BAB09440.1| U6 snRNA-associated Sm-like
protein-like [Arabidopsis thaliana]
gi|16554971|gb|AAK61592.1| Sm-like protein [Arabidopsis
thaliana] gi|106879147|gb|ABF82603.1| At5g48870
[Arabidopsis thaliana] gi|332008352|gb|AED95735.1| U6
snRNA-associated Sm-like protein LSm5 [Arabidopsis
thaliana] gi|386305005|gb|AFJ05005.1| hypothetical
protein [Arabidopsis thaliana]
Length = 88
Score = 159 bits (402), Expect = 7e-37
Identities = 80/86 (93%), Positives = 83/86 (96%)
Frame = -2
Query: 597 MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEMTAEGN 418
MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVG L+GFDVYVNMVLEDVTEYE+TAEG
Sbjct: 1 MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGILKGFDVYVNMVLEDVTEYEITAEG- 59
Query: 417 NRVTKLDQILLNGNNIAILVPGGSPD 340
RVTKLDQILLNGNNIAILVPGGSP+
Sbjct: 60 RRVTKLDQILLNGNNIAILVPGGSPE 85
>ref|XP_006279717.1| hypothetical protein CARUB_v10027453mg [Capsella rubella]
gi|482548421|gb|EOA12615.1| hypothetical protein
CARUB_v10027453mg [Capsella rubella]
Length = 88
Score = 159 bits (401), Expect = 9e-37
Identities = 79/86 (91%), Positives = 83/86 (96%)
Frame = -2
Query: 597 MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEMTAEGN 418
MANNPSQLLPSELIDRC+GSKIWVIMKGDKELVG L+GFDVYVNMVLEDVTEYE+TAEG
Sbjct: 1 MANNPSQLLPSELIDRCVGSKIWVIMKGDKELVGILKGFDVYVNMVLEDVTEYEITAEG- 59
Query: 417 NRVTKLDQILLNGNNIAILVPGGSPD 340
RVTKLDQILLNGNNIAILVPGGSP+
Sbjct: 60 RRVTKLDQILLNGNNIAILVPGGSPE 85
>ref|XP_004247830.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5-like [Solanum
lycopersicum] gi|565389172|ref|XP_006360334.1|
PREDICTED: U6 snRNA-associated Sm-like protein LSm5-like
[Solanum tuberosum]
Length = 88
Score = 159 bits (401), Expect = 9e-37
Identities = 79/87 (90%), Positives = 83/87 (95%)
Frame = -2
Query: 594 ANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEMTAEGNN 415
+NNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYE+T+EG
Sbjct: 3 SNNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITSEG-R 61
Query: 414 RVTKLDQILLNGNNIAILVPGGSPDSE 334
R+TKLDQILLNGNNIAILVPGGSP E
Sbjct: 62 RITKLDQILLNGNNIAILVPGGSPPDE 88
>ref|XP_002863925.1| hypothetical protein ARALYDRAFT_917817 [Arabidopsis lyrata subsp.
lyrata] gi|297309760|gb|EFH40184.1| hypothetical protein
ARALYDRAFT_917817 [Arabidopsis lyrata subsp. lyrata]
Length = 88
Score = 157 bits (397), Expect = 3e-36
Identities = 79/86 (91%), Positives = 83/86 (96%)
Frame = -2
Query: 597 MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEMTAEGN 418
MA+NPSQLLPSELIDRCIGSKIWVIMKGDKELVG L+GFDVYVNMVLEDVTEYE+TAEG
Sbjct: 1 MASNPSQLLPSELIDRCIGSKIWVIMKGDKELVGILKGFDVYVNMVLEDVTEYEITAEG- 59
Query: 417 NRVTKLDQILLNGNNIAILVPGGSPD 340
RVTKLDQILLNGNNIAILVPGGSP+
Sbjct: 60 RRVTKLDQILLNGNNIAILVPGGSPE 85