BLASTX nr result
ID: Catharanthus23_contig00014516
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00014516
(215 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_008081286.1| ribosomal protein L33 (chloroplast) [Cathara... 42 2e-07
gb|AGW04995.1| ribosomal protein L33 [Vincetoxicum rossicum] 44 3e-07
gb|AGW04384.1| ribosomal protein L33 [Araujia sericifera] 41 4e-07
gb|AGW04537.1| ribosomal protein L33 [Eustegia minuta] 41 5e-07
gb|AGW04461.1| ribosomal protein L33 [Astephanus triflorus] 41 5e-07
gb|ADD30181.1| ribosomal protein L33 [Nerium oleander] gi|544186... 41 5e-07
gb|AGW04764.1| ribosomal protein L33 [Orthosia scoparia] 41 1e-06
gb|AGW04687.1| ribosomal protein L33 [Matelea biflora] 41 1e-06
gb|AER52842.1| ribosomal protein L33 [Asclepias leptopus] 39 2e-06
ref|YP_008578644.1| ribosomal protein L33 (chloroplast) [Asclepi... 39 2e-06
gb|ACC95218.1| ribosomal protein L33 [Eudianthe laeta] 41 5e-06
ref|YP_005089428.1| rpl33 gene product (chloroplast) [Silene noc... 41 5e-06
ref|YP_008815225.1| ribosomal protein L33 (chloroplast) [Kalopan... 40 5e-06
ref|YP_007890394.1| ribosomal protein L33 (chloroplast) [Ardisia... 41 5e-06
gb|ABY85755.1| ribosomal protein L33 [Silene aegyptiaca] 41 6e-06
gb|ABY85713.1| ribosomal protein L33 [Silene pseudoatocion] 41 6e-06
gb|ABY85650.1| ribosomal protein L33 [Silene cryptoneura] 41 6e-06
ref|YP_005089517.1| rpl33 gene product (chloroplast) [Silene con... 41 6e-06
ref|YP_005089355.1| rpl33 gene product (chloroplast) [Silene vul... 41 6e-06
ref|YP_009000197.1| ribosomal protein L33 (chloroplast) [Silene ... 41 6e-06
>ref|YP_008081286.1| ribosomal protein L33 (chloroplast) [Catharanthus roseus]
gi|474452097|gb|AGI51165.1| ribosomal protein L33
(chloroplast) [Catharanthus roseus]
Length = 66
Score = 42.0 bits (97), Expect(2) = 2e-07
Identities = 18/25 (72%), Positives = 21/25 (84%)
Frame = -3
Query: 138 DKDNRLTRGISKYITQKNSHNTPNR 64
+K N + RGIS+YITQKN HNTPNR
Sbjct: 21 NKVNGVARGISRYITQKNRHNTPNR 45
Score = 38.5 bits (88), Expect(2) = 2e-07
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = -1
Query: 68 IDRRKFCLNCYEYTIHGKIKK 6
++ RKFC CYEYTIHG+IKK
Sbjct: 46 LELRKFCPYCYEYTIHGEIKK 66
>gb|AGW04995.1| ribosomal protein L33 [Vincetoxicum rossicum]
Length = 66
Score = 43.9 bits (102), Expect(2) = 3e-07
Identities = 18/22 (81%), Positives = 21/22 (95%)
Frame = -3
Query: 129 NRLTRGISKYITQKNSHNTPNR 64
NR++RGIS+YITQKN HNTPNR
Sbjct: 24 NRVSRGISRYITQKNRHNTPNR 45
Score = 36.2 bits (82), Expect(2) = 3e-07
Identities = 13/21 (61%), Positives = 19/21 (90%)
Frame = -1
Query: 68 IDRRKFCLNCYEYTIHGKIKK 6
++ RKFC +C++YTIHG+IKK
Sbjct: 46 LELRKFCPHCHKYTIHGEIKK 66
>gb|AGW04384.1| ribosomal protein L33 [Araujia sericifera]
Length = 66
Score = 41.2 bits (95), Expect(2) = 4e-07
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = -3
Query: 129 NRLTRGISKYITQKNSHNTPNR 64
N ++RGIS+YITQKN HNTPNR
Sbjct: 24 NGVSRGISRYITQKNRHNTPNR 45
Score = 38.5 bits (88), Expect(2) = 4e-07
Identities = 14/21 (66%), Positives = 19/21 (90%)
Frame = -1
Query: 68 IDRRKFCLNCYEYTIHGKIKK 6
++ RKFC +CY+YTIHG+IKK
Sbjct: 46 LELRKFCRHCYKYTIHGEIKK 66
>gb|AGW04537.1| ribosomal protein L33 [Eustegia minuta]
Length = 66
Score = 41.2 bits (95), Expect(2) = 5e-07
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = -3
Query: 129 NRLTRGISKYITQKNSHNTPNR 64
N ++RGIS+YITQKN HNTPNR
Sbjct: 24 NGVSRGISRYITQKNRHNTPNR 45
Score = 38.1 bits (87), Expect(2) = 5e-07
Identities = 14/21 (66%), Positives = 19/21 (90%)
Frame = -1
Query: 68 IDRRKFCLNCYEYTIHGKIKK 6
++ RKFC +CY+YTIHG+IKK
Sbjct: 46 LELRKFCPHCYKYTIHGEIKK 66
>gb|AGW04461.1| ribosomal protein L33 [Astephanus triflorus]
Length = 66
Score = 41.2 bits (95), Expect(2) = 5e-07
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = -3
Query: 129 NRLTRGISKYITQKNSHNTPNR 64
N ++RGIS+YITQKN HNTPNR
Sbjct: 24 NGVSRGISRYITQKNRHNTPNR 45
Score = 38.1 bits (87), Expect(2) = 5e-07
Identities = 14/21 (66%), Positives = 19/21 (90%)
Frame = -1
Query: 68 IDRRKFCLNCYEYTIHGKIKK 6
++ RKFC +CY+YTIHG+IKK
Sbjct: 46 LELRKFCPHCYKYTIHGEIKK 66
>gb|ADD30181.1| ribosomal protein L33 [Nerium oleander] gi|544186359|gb|AGW04307.1|
ribosomal protein L33 [Secamone afzelii]
gi|544186666|gb|AGW04610.1| ribosomal protein L33
[Marsdenia astephanoides] gi|544186900|gb|AGW04841.1|
ribosomal protein L33 [Sisyranthus trichostomus]
gi|544186978|gb|AGW04918.1| ribosomal protein L33
[Telosma cordata]
Length = 66
Score = 41.2 bits (95), Expect(2) = 5e-07
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = -3
Query: 129 NRLTRGISKYITQKNSHNTPNR 64
N ++RGIS+YITQKN HNTPNR
Sbjct: 24 NGVSRGISRYITQKNRHNTPNR 45
Score = 38.1 bits (87), Expect(2) = 5e-07
Identities = 14/21 (66%), Positives = 19/21 (90%)
Frame = -1
Query: 68 IDRRKFCLNCYEYTIHGKIKK 6
++ RKFC +CY+YTIHG+IKK
Sbjct: 46 LELRKFCPHCYKYTIHGEIKK 66
>gb|AGW04764.1| ribosomal protein L33 [Orthosia scoparia]
Length = 66
Score = 41.2 bits (95), Expect(2) = 1e-06
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = -3
Query: 129 NRLTRGISKYITQKNSHNTPNR 64
N ++RGIS+YITQKN HNTPNR
Sbjct: 24 NGVSRGISRYITQKNRHNTPNR 45
Score = 37.0 bits (84), Expect(2) = 1e-06
Identities = 13/21 (61%), Positives = 19/21 (90%)
Frame = -1
Query: 68 IDRRKFCLNCYEYTIHGKIKK 6
++ +KFC +CY+YTIHG+IKK
Sbjct: 46 LELKKFCPHCYKYTIHGEIKK 66
>gb|AGW04687.1| ribosomal protein L33 [Matelea biflora]
Length = 66
Score = 41.2 bits (95), Expect(2) = 1e-06
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = -3
Query: 129 NRLTRGISKYITQKNSHNTPNR 64
N ++RGIS+YITQKN HNTPNR
Sbjct: 24 NGVSRGISRYITQKNRHNTPNR 45
Score = 36.6 bits (83), Expect(2) = 1e-06
Identities = 13/21 (61%), Positives = 19/21 (90%)
Frame = -1
Query: 68 IDRRKFCLNCYEYTIHGKIKK 6
++ RKFC +CY+YTIHG+I+K
Sbjct: 46 LELRKFCPHCYKYTIHGEIQK 66
>gb|AER52842.1| ribosomal protein L33 [Asclepias leptopus]
Length = 66
Score = 38.9 bits (89), Expect(2) = 2e-06
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = -3
Query: 129 NRLTRGISKYITQKNSHNTPNR 64
N ++RGIS+YITQKN H TPNR
Sbjct: 24 NGVSRGISRYITQKNRHKTPNR 45
Score = 38.5 bits (88), Expect(2) = 2e-06
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = -1
Query: 89 RTVTIRLIDRRKFCLNCYEYTIHGKIKK 6
R T ++ RKFC +CY+YTIHG+IKK
Sbjct: 39 RHKTPNRLELRKFCPHCYKYTIHGEIKK 66
>ref|YP_008578644.1| ribosomal protein L33 (chloroplast) [Asclepias syriaca]
gi|326200301|gb|ADZ52340.1| ribosomal protein L33
[Asclepias syriaca] gi|355331744|gb|AER52433.1|
ribosomal protein L33 [Asclepias albicans]
gi|355331827|gb|AER52515.1| ribosomal protein L33
[Asclepias albicans] gi|355331910|gb|AER52597.1|
ribosomal protein L33 [Asclepias coulteri]
gi|355331993|gb|AER52679.1| ribosomal protein L33
[Asclepias cutleri] gi|355332076|gb|AER52761.1|
ribosomal protein L33 [Asclepias cutleri]
gi|355332241|gb|AER52924.1| ribosomal protein L33
[Asclepias macrotis] gi|355332322|gb|AER53004.1|
ribosomal protein L33 [Asclepias macrotis]
gi|355332401|gb|AER53082.1| ribosomal protein L33
[Asclepias masonii] gi|355332484|gb|AER53164.1|
ribosomal protein L33 [Asclepias subaphylla]
gi|355332565|gb|AER53244.1| ribosomal protein L33
[Asclepias subaphylla] gi|355332646|gb|AER53324.1|
ribosomal protein L33 [Asclepias subulata]
gi|355332729|gb|AER53406.1| ribosomal protein L33
[Asclepias subulata] gi|355332812|gb|AER53488.1|
ribosomal protein L33 [Asclepias albicans x Asclepias
subulata] gi|544187229|gb|AGW05157.1| ribosomal protein
L33 (chloroplast) [Asclepias syriaca]
Length = 66
Score = 38.9 bits (89), Expect(2) = 2e-06
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = -3
Query: 129 NRLTRGISKYITQKNSHNTPNR 64
N ++RGIS+YITQKN H TPNR
Sbjct: 24 NGVSRGISRYITQKNRHKTPNR 45
Score = 38.5 bits (88), Expect(2) = 2e-06
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = -1
Query: 89 RTVTIRLIDRRKFCLNCYEYTIHGKIKK 6
R T ++ RKFC +CY+YTIHG+IKK
Sbjct: 39 RHKTPNRLELRKFCPHCYKYTIHGEIKK 66
>gb|ACC95218.1| ribosomal protein L33 [Eudianthe laeta]
Length = 66
Score = 41.2 bits (95), Expect(2) = 5e-06
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = -3
Query: 129 NRLTRGISKYITQKNSHNTPNR 64
N+ +RGIS+YITQKN HNTPNR
Sbjct: 24 NKESRGISRYITQKNRHNTPNR 45
Score = 34.7 bits (78), Expect(2) = 5e-06
Identities = 13/21 (61%), Positives = 18/21 (85%)
Frame = -1
Query: 68 IDRRKFCLNCYEYTIHGKIKK 6
++ RKFC CY++TIHG+IKK
Sbjct: 46 LEFRKFCPYCYKHTIHGEIKK 66
>ref|YP_005089428.1| rpl33 gene product (chloroplast) [Silene noctiflora]
gi|329755616|gb|AEC04178.1| ribosomal protein L33
(chloroplast) [Silene noctiflora]
Length = 66
Score = 40.8 bits (94), Expect(2) = 5e-06
Identities = 16/22 (72%), Positives = 20/22 (90%)
Frame = -3
Query: 129 NRLTRGISKYITQKNSHNTPNR 64
N+ +RG+S+YITQKN HNTPNR
Sbjct: 24 NKESRGVSRYITQKNRHNTPNR 45
Score = 35.0 bits (79), Expect(2) = 5e-06
Identities = 13/21 (61%), Positives = 18/21 (85%)
Frame = -1
Query: 68 IDRRKFCLNCYEYTIHGKIKK 6
++ RKFC CY++TIHG+IKK
Sbjct: 46 LELRKFCPYCYKHTIHGEIKK 66
>ref|YP_008815225.1| ribosomal protein L33 (chloroplast) [Kalopanax septemlobus]
gi|458599633|gb|AGG39325.1| ribosomal protein L33
(chloroplast) [Kalopanax septemlobus]
Length = 66
Score = 40.4 bits (93), Expect(2) = 5e-06
Identities = 16/22 (72%), Positives = 20/22 (90%)
Frame = -3
Query: 129 NRLTRGISKYITQKNSHNTPNR 64
N+++ GIS+YITQKN HNTPNR
Sbjct: 24 NKVSTGISRYITQKNRHNTPNR 45
Score = 35.4 bits (80), Expect(2) = 5e-06
Identities = 13/21 (61%), Positives = 18/21 (85%)
Frame = -1
Query: 68 IDRRKFCLNCYEYTIHGKIKK 6
++ RKFC CY++TIHG+IKK
Sbjct: 46 LELRKFCSYCYKHTIHGEIKK 66
>ref|YP_007890394.1| ribosomal protein L33 (chloroplast) [Ardisia polysticta]
gi|456367991|gb|AGG36905.1| ribosomal protein L33
(chloroplast) [Ardisia polysticta]
Length = 65
Score = 40.8 bits (94), Expect(2) = 5e-06
Identities = 16/22 (72%), Positives = 21/22 (95%)
Frame = -3
Query: 129 NRLTRGISKYITQKNSHNTPNR 64
N+++RGIS++ITQKN HNTPNR
Sbjct: 23 NKVSRGISRHITQKNRHNTPNR 44
Score = 35.0 bits (79), Expect(2) = 5e-06
Identities = 13/21 (61%), Positives = 18/21 (85%)
Frame = -1
Query: 68 IDRRKFCLNCYEYTIHGKIKK 6
++ RKFC CY++TIHG+IKK
Sbjct: 45 LELRKFCPYCYKHTIHGEIKK 65
>gb|ABY85755.1| ribosomal protein L33 [Silene aegyptiaca]
Length = 66
Score = 40.8 bits (94), Expect(2) = 6e-06
Identities = 16/22 (72%), Positives = 20/22 (90%)
Frame = -3
Query: 129 NRLTRGISKYITQKNSHNTPNR 64
N+ +RG+S+YITQKN HNTPNR
Sbjct: 24 NKESRGVSRYITQKNRHNTPNR 45
Score = 34.7 bits (78), Expect(2) = 6e-06
Identities = 13/21 (61%), Positives = 18/21 (85%)
Frame = -1
Query: 68 IDRRKFCLNCYEYTIHGKIKK 6
++ RKFC CY++TIHG+IKK
Sbjct: 46 LEFRKFCPYCYKHTIHGEIKK 66
>gb|ABY85713.1| ribosomal protein L33 [Silene pseudoatocion]
Length = 66
Score = 40.8 bits (94), Expect(2) = 6e-06
Identities = 16/22 (72%), Positives = 20/22 (90%)
Frame = -3
Query: 129 NRLTRGISKYITQKNSHNTPNR 64
N+ +RG+S+YITQKN HNTPNR
Sbjct: 24 NKESRGVSRYITQKNRHNTPNR 45
Score = 34.7 bits (78), Expect(2) = 6e-06
Identities = 13/21 (61%), Positives = 18/21 (85%)
Frame = -1
Query: 68 IDRRKFCLNCYEYTIHGKIKK 6
++ RKFC CY++TIHG+IKK
Sbjct: 46 LEFRKFCPYCYKHTIHGEIKK 66
>gb|ABY85650.1| ribosomal protein L33 [Silene cryptoneura]
Length = 66
Score = 40.8 bits (94), Expect(2) = 6e-06
Identities = 16/22 (72%), Positives = 20/22 (90%)
Frame = -3
Query: 129 NRLTRGISKYITQKNSHNTPNR 64
N+ +RG+S+YITQKN HNTPNR
Sbjct: 24 NKESRGVSRYITQKNRHNTPNR 45
Score = 34.7 bits (78), Expect(2) = 6e-06
Identities = 13/21 (61%), Positives = 18/21 (85%)
Frame = -1
Query: 68 IDRRKFCLNCYEYTIHGKIKK 6
++ RKFC CY++TIHG+IKK
Sbjct: 46 LEFRKFCPYCYKHTIHGEIKK 66
>ref|YP_005089517.1| rpl33 gene product (chloroplast) [Silene conica]
gi|166235700|gb|ABY85608.1| ribosomal protein L33
[Silene conica] gi|329755460|gb|AEC04024.1| ribosomal
protein L33 (chloroplast) [Silene conica]
Length = 66
Score = 40.8 bits (94), Expect(2) = 6e-06
Identities = 16/22 (72%), Positives = 20/22 (90%)
Frame = -3
Query: 129 NRLTRGISKYITQKNSHNTPNR 64
N+ +RG+S+YITQKN HNTPNR
Sbjct: 24 NKESRGVSRYITQKNRHNTPNR 45
Score = 34.7 bits (78), Expect(2) = 6e-06
Identities = 13/21 (61%), Positives = 18/21 (85%)
Frame = -1
Query: 68 IDRRKFCLNCYEYTIHGKIKK 6
++ RKFC CY++TIHG+IKK
Sbjct: 46 LEFRKFCPYCYKHTIHGEIKK 66
>ref|YP_005089355.1| rpl33 gene product (chloroplast) [Silene vulgaris]
gi|166235568|gb|ABY85482.1| ribosomal protein L33
[Silene samia] gi|166235590|gb|ABY85503.1| ribosomal
protein L33 [Silene littorea]
gi|166235612|gb|ABY85524.1| ribosomal protein L33
[Silene uniflora] gi|166235634|gb|ABY85545.1| ribosomal
protein L33 [Silene zawadskii]
gi|166235656|gb|ABY85566.1| ribosomal protein L33
[Silene sorensenis] gi|166235678|gb|ABY85587.1|
ribosomal protein L33 [Silene integripetala]
gi|166235788|gb|ABY85692.1| ribosomal protein L33
[Silene fruticosa] gi|166235832|gb|ABY85734.1| ribosomal
protein L33 [Silene schafta] gi|166235876|gb|ABY85776.1|
ribosomal protein L33 [Silene atocioides]
gi|183240664|gb|ACC61107.1| ribosomal protein L33
[Petrocoptis pyrenaica] gi|183240667|gb|ACC61109.1|
ribosomal protein L33 [Silene flos-jovis]
gi|183240670|gb|ACC61111.1| ribosomal protein L33
[Silene flos-cuculi] gi|183240673|gb|ACC61113.1|
ribosomal protein L33 [Atocion rupestre]
gi|329755707|gb|AEC04268.1| ribosomal protein L33
(chloroplast) [Silene vulgaris]
Length = 66
Score = 40.8 bits (94), Expect(2) = 6e-06
Identities = 16/22 (72%), Positives = 20/22 (90%)
Frame = -3
Query: 129 NRLTRGISKYITQKNSHNTPNR 64
N+ +RG+S+YITQKN HNTPNR
Sbjct: 24 NKESRGVSRYITQKNRHNTPNR 45
Score = 34.7 bits (78), Expect(2) = 6e-06
Identities = 13/21 (61%), Positives = 18/21 (85%)
Frame = -1
Query: 68 IDRRKFCLNCYEYTIHGKIKK 6
++ RKFC CY++TIHG+IKK
Sbjct: 46 LEFRKFCPYCYKHTIHGEIKK 66
>ref|YP_009000197.1| ribosomal protein L33 (chloroplast) [Silene paradoxa]
gi|576999569|ref|YP_009000118.1| ribosomal protein L33
(chloroplast) [Silene chalcedonica]
gi|166235546|gb|ABY85461.1| ribosomal protein L33
[Silene chalcedonica] gi|555944206|gb|AGZ18108.1|
ribosomal protein L33 (chloroplast) [Silene
chalcedonica] gi|555944286|gb|AGZ18187.1| ribosomal
protein L33 (chloroplast) [Silene paradoxa]
Length = 66
Score = 40.8 bits (94), Expect(2) = 6e-06
Identities = 16/22 (72%), Positives = 20/22 (90%)
Frame = -3
Query: 129 NRLTRGISKYITQKNSHNTPNR 64
N+ +RG+S+YITQKN HNTPNR
Sbjct: 24 NKESRGVSRYITQKNRHNTPNR 45
Score = 34.7 bits (78), Expect(2) = 6e-06
Identities = 13/21 (61%), Positives = 18/21 (85%)
Frame = -1
Query: 68 IDRRKFCLNCYEYTIHGKIKK 6
++ RKFC CY++TIHG+IKK
Sbjct: 46 LEFRKFCPYCYKHTIHGEIKK 66