BLASTX nr result
ID: Catharanthus23_contig00014515
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00014515
(687 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_008081286.1| ribosomal protein L33 (chloroplast) [Cathara... 52 2e-09
gb|AGW04537.1| ribosomal protein L33 [Eustegia minuta] 49 1e-08
gb|AGW04461.1| ribosomal protein L33 [Astephanus triflorus] 49 1e-08
gb|ADD30181.1| ribosomal protein L33 [Nerium oleander] gi|544186... 49 1e-08
gb|AGW04384.1| ribosomal protein L33 [Araujia sericifera] 48 3e-08
gb|AGW04764.1| ribosomal protein L33 [Orthosia scoparia] 48 6e-08
gb|AGW04687.1| ribosomal protein L33 [Matelea biflora] 48 8e-08
gb|AER52842.1| ribosomal protein L33 [Asclepias leptopus] 47 8e-08
ref|YP_008578644.1| ribosomal protein L33 (chloroplast) [Asclepi... 46 1e-07
gb|AGW04995.1| ribosomal protein L33 [Vincetoxicum rossicum] 45 8e-07
ref|YP_008578560.1| ribosomal protein L33 (chloroplast) [Asclepi... 46 1e-06
ref|YP_008815225.1| ribosomal protein L33 (chloroplast) [Kalopan... 43 2e-06
ref|YP_762282.1| ribosomal protein L33 [Morus indica] gi|1221667... 44 2e-06
gb|ABY86522.1| ribosomal protein L33 [Heliosperma alpestre] 44 3e-06
ref|YP_008963501.1| ribosomal protein L33 (chloroplast) [Penthor... 43 4e-06
gb|ACC95218.1| ribosomal protein L33 [Eudianthe laeta] 44 5e-06
ref|YP_005089428.1| rpl33 gene product (chloroplast) [Silene noc... 43 7e-06
gb|ABY85755.1| ribosomal protein L33 [Silene aegyptiaca] 43 7e-06
gb|ABY85650.1| ribosomal protein L33 [Silene cryptoneura] 43 7e-06
ref|YP_005089517.1| rpl33 gene product (chloroplast) [Silene con... 43 7e-06
>ref|YP_008081286.1| ribosomal protein L33 (chloroplast) [Catharanthus roseus]
gi|474452097|gb|AGI51165.1| ribosomal protein L33
(chloroplast) [Catharanthus roseus]
Length = 66
Score = 52.0 bits (123), Expect(2) = 2e-09
Identities = 23/30 (76%), Positives = 26/30 (86%)
Frame = -2
Query: 227 CSSDKVNGLARGISRYITQKNLHNMPNQLE 138
C +KVNG+ARGISRYITQKN HN PN+LE
Sbjct: 18 CVRNKVNGVARGISRYITQKNRHNTPNRLE 47
Score = 37.0 bits (84), Expect(2) = 2e-09
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = -1
Query: 138 RKFCSNCYEYTIHWEIKK 85
RKFC CYEYTIH EIKK
Sbjct: 49 RKFCPYCYEYTIHGEIKK 66
>gb|AGW04537.1| ribosomal protein L33 [Eustegia minuta]
Length = 66
Score = 49.3 bits (116), Expect(2) = 1e-08
Identities = 21/30 (70%), Positives = 26/30 (86%)
Frame = -2
Query: 227 CSSDKVNGLARGISRYITQKNLHNMPNQLE 138
C ++VNG++RGISRYITQKN HN PN+LE
Sbjct: 18 CIRNEVNGVSRGISRYITQKNRHNTPNRLE 47
Score = 36.6 bits (83), Expect(2) = 1e-08
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -1
Query: 138 RKFCSNCYEYTIHWEIKK 85
RKFC +CY+YTIH EIKK
Sbjct: 49 RKFCPHCYKYTIHGEIKK 66
>gb|AGW04461.1| ribosomal protein L33 [Astephanus triflorus]
Length = 66
Score = 49.3 bits (116), Expect(2) = 1e-08
Identities = 21/30 (70%), Positives = 26/30 (86%)
Frame = -2
Query: 227 CSSDKVNGLARGISRYITQKNLHNMPNQLE 138
C ++VNG++RGISRYITQKN HN PN+LE
Sbjct: 18 CVRNEVNGVSRGISRYITQKNRHNTPNRLE 47
Score = 36.6 bits (83), Expect(2) = 1e-08
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -1
Query: 138 RKFCSNCYEYTIHWEIKK 85
RKFC +CY+YTIH EIKK
Sbjct: 49 RKFCPHCYKYTIHGEIKK 66
>gb|ADD30181.1| ribosomal protein L33 [Nerium oleander] gi|544186359|gb|AGW04307.1|
ribosomal protein L33 [Secamone afzelii]
gi|544186666|gb|AGW04610.1| ribosomal protein L33
[Marsdenia astephanoides] gi|544186900|gb|AGW04841.1|
ribosomal protein L33 [Sisyranthus trichostomus]
gi|544186978|gb|AGW04918.1| ribosomal protein L33
[Telosma cordata]
Length = 66
Score = 49.3 bits (116), Expect(2) = 1e-08
Identities = 21/30 (70%), Positives = 26/30 (86%)
Frame = -2
Query: 227 CSSDKVNGLARGISRYITQKNLHNMPNQLE 138
C ++VNG++RGISRYITQKN HN PN+LE
Sbjct: 18 CVRNEVNGVSRGISRYITQKNRHNTPNRLE 47
Score = 36.6 bits (83), Expect(2) = 1e-08
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -1
Query: 138 RKFCSNCYEYTIHWEIKK 85
RKFC +CY+YTIH EIKK
Sbjct: 49 RKFCPHCYKYTIHGEIKK 66
>gb|AGW04384.1| ribosomal protein L33 [Araujia sericifera]
Length = 66
Score = 48.1 bits (113), Expect(2) = 3e-08
Identities = 21/30 (70%), Positives = 25/30 (83%)
Frame = -2
Query: 227 CSSDKVNGLARGISRYITQKNLHNMPNQLE 138
C + VNG++RGISRYITQKN HN PN+LE
Sbjct: 18 CVRNGVNGVSRGISRYITQKNRHNTPNRLE 47
Score = 36.6 bits (83), Expect(2) = 3e-08
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -1
Query: 138 RKFCSNCYEYTIHWEIKK 85
RKFC +CY+YTIH EIKK
Sbjct: 49 RKFCRHCYKYTIHGEIKK 66
>gb|AGW04764.1| ribosomal protein L33 [Orthosia scoparia]
Length = 66
Score = 48.1 bits (113), Expect(2) = 6e-08
Identities = 21/30 (70%), Positives = 25/30 (83%)
Frame = -2
Query: 227 CSSDKVNGLARGISRYITQKNLHNMPNQLE 138
C + VNG++RGISRYITQKN HN PN+LE
Sbjct: 18 CVRNGVNGVSRGISRYITQKNRHNTPNRLE 47
Score = 35.4 bits (80), Expect(2) = 6e-08
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = -1
Query: 138 RKFCSNCYEYTIHWEIKK 85
+KFC +CY+YTIH EIKK
Sbjct: 49 KKFCPHCYKYTIHGEIKK 66
>gb|AGW04687.1| ribosomal protein L33 [Matelea biflora]
Length = 66
Score = 48.1 bits (113), Expect(2) = 8e-08
Identities = 21/30 (70%), Positives = 25/30 (83%)
Frame = -2
Query: 227 CSSDKVNGLARGISRYITQKNLHNMPNQLE 138
C + VNG++RGISRYITQKN HN PN+LE
Sbjct: 18 CVRNGVNGVSRGISRYITQKNRHNTPNRLE 47
Score = 35.0 bits (79), Expect(2) = 8e-08
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = -1
Query: 138 RKFCSNCYEYTIHWEIKK 85
RKFC +CY+YTIH EI+K
Sbjct: 49 RKFCPHCYKYTIHGEIQK 66
>gb|AER52842.1| ribosomal protein L33 [Asclepias leptopus]
Length = 66
Score = 46.6 bits (109), Expect(2) = 8e-08
Identities = 23/43 (53%), Positives = 30/43 (69%), Gaps = 3/43 (6%)
Frame = -2
Query: 257 EDGGSTINFHCSS---DKVNGLARGISRYITQKNLHNMPNQLE 138
+D T+ C+S + VNG++RGISRYITQKN H PN+LE
Sbjct: 5 KDARVTVILECTSCVRNGVNGVSRGISRYITQKNRHKTPNRLE 47
Score = 36.6 bits (83), Expect(2) = 8e-08
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -1
Query: 138 RKFCSNCYEYTIHWEIKK 85
RKFC +CY+YTIH EIKK
Sbjct: 49 RKFCPHCYKYTIHGEIKK 66
>ref|YP_008578644.1| ribosomal protein L33 (chloroplast) [Asclepias syriaca]
gi|326200301|gb|ADZ52340.1| ribosomal protein L33
[Asclepias syriaca] gi|355331744|gb|AER52433.1|
ribosomal protein L33 [Asclepias albicans]
gi|355331827|gb|AER52515.1| ribosomal protein L33
[Asclepias albicans] gi|355331910|gb|AER52597.1|
ribosomal protein L33 [Asclepias coulteri]
gi|355331993|gb|AER52679.1| ribosomal protein L33
[Asclepias cutleri] gi|355332076|gb|AER52761.1|
ribosomal protein L33 [Asclepias cutleri]
gi|355332241|gb|AER52924.1| ribosomal protein L33
[Asclepias macrotis] gi|355332322|gb|AER53004.1|
ribosomal protein L33 [Asclepias macrotis]
gi|355332401|gb|AER53082.1| ribosomal protein L33
[Asclepias masonii] gi|355332484|gb|AER53164.1|
ribosomal protein L33 [Asclepias subaphylla]
gi|355332565|gb|AER53244.1| ribosomal protein L33
[Asclepias subaphylla] gi|355332646|gb|AER53324.1|
ribosomal protein L33 [Asclepias subulata]
gi|355332729|gb|AER53406.1| ribosomal protein L33
[Asclepias subulata] gi|355332812|gb|AER53488.1|
ribosomal protein L33 [Asclepias albicans x Asclepias
subulata] gi|544187229|gb|AGW05157.1| ribosomal protein
L33 (chloroplast) [Asclepias syriaca]
Length = 66
Score = 45.8 bits (107), Expect(2) = 1e-07
Identities = 20/30 (66%), Positives = 24/30 (80%)
Frame = -2
Query: 227 CSSDKVNGLARGISRYITQKNLHNMPNQLE 138
C + VNG++RGISRYITQKN H PN+LE
Sbjct: 18 CVRNGVNGVSRGISRYITQKNRHKTPNRLE 47
Score = 36.6 bits (83), Expect(2) = 1e-07
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -1
Query: 138 RKFCSNCYEYTIHWEIKK 85
RKFC +CY+YTIH EIKK
Sbjct: 49 RKFCPHCYKYTIHGEIKK 66
>gb|AGW04995.1| ribosomal protein L33 [Vincetoxicum rossicum]
Length = 66
Score = 45.1 bits (105), Expect(2) = 8e-07
Identities = 20/30 (66%), Positives = 24/30 (80%)
Frame = -2
Query: 227 CSSDKVNGLARGISRYITQKNLHNMPNQLE 138
C + VN ++RGISRYITQKN HN PN+LE
Sbjct: 18 CVRNGVNRVSRGISRYITQKNRHNTPNRLE 47
Score = 34.7 bits (78), Expect(2) = 8e-07
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = -1
Query: 138 RKFCSNCYEYTIHWEIKK 85
RKFC +C++YTIH EIKK
Sbjct: 49 RKFCPHCHKYTIHGEIKK 66
>ref|YP_008578560.1| ribosomal protein L33 (chloroplast) [Asclepias nivea]
gi|544187162|gb|AGW05100.1| ribosomal protein L33
(chloroplast) [Asclepias nivea]
Length = 66
Score = 45.8 bits (107), Expect(2) = 1e-06
Identities = 20/30 (66%), Positives = 24/30 (80%)
Frame = -2
Query: 227 CSSDKVNGLARGISRYITQKNLHNMPNQLE 138
C + VNG++RGISRYITQKN H PN+LE
Sbjct: 18 CVRNGVNGVSRGISRYITQKNRHKTPNRLE 47
Score = 33.1 bits (74), Expect(2) = 1e-06
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -1
Query: 138 RKFCSNCYEYTIHWEIKK 85
RKFC +CY+ TIH EIKK
Sbjct: 49 RKFCPHCYKSTIHGEIKK 66
>ref|YP_008815225.1| ribosomal protein L33 (chloroplast) [Kalopanax septemlobus]
gi|458599633|gb|AGG39325.1| ribosomal protein L33
(chloroplast) [Kalopanax septemlobus]
Length = 66
Score = 43.1 bits (100), Expect(2) = 2e-06
Identities = 19/31 (61%), Positives = 24/31 (77%)
Frame = -2
Query: 230 HCSSDKVNGLARGISRYITQKNLHNMPNQLE 138
+C + VN ++ GISRYITQKN HN PN+LE
Sbjct: 17 NCVRNGVNKVSTGISRYITQKNRHNTPNRLE 47
Score = 35.4 bits (80), Expect(2) = 2e-06
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -1
Query: 138 RKFCSNCYEYTIHWEIKK 85
RKFCS CY++TIH EIKK
Sbjct: 49 RKFCSYCYKHTIHGEIKK 66
>ref|YP_762282.1| ribosomal protein L33 [Morus indica]
gi|122166784|sp|Q09WZ6.1|RK33_MORIN RecName: Full=50S
ribosomal protein L33, chloroplastic
gi|78100336|gb|ABB20977.1| ribosomal protein L33 [Morus
indica]
Length = 66
Score = 44.3 bits (103), Expect(2) = 2e-06
Identities = 23/43 (53%), Positives = 30/43 (69%), Gaps = 3/43 (6%)
Frame = -2
Query: 257 EDGGSTINFHCSS---DKVNGLARGISRYITQKNLHNMPNQLE 138
+D TI C+S ++VN +RGISRYITQKN HN P++LE
Sbjct: 5 KDARVTIILECTSCLRNRVNKESRGISRYITQKNRHNTPSRLE 47
Score = 33.9 bits (76), Expect(2) = 2e-06
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = -1
Query: 138 RKFCSNCYEYTIHWEIKK 85
RKFC +CY++TIH E+KK
Sbjct: 49 RKFCPSCYKHTIHGELKK 66
>gb|ABY86522.1| ribosomal protein L33 [Heliosperma alpestre]
Length = 66
Score = 44.3 bits (103), Expect(2) = 3e-06
Identities = 20/30 (66%), Positives = 22/30 (73%)
Frame = -2
Query: 227 CSSDKVNGLARGISRYITQKNLHNMPNQLE 138
C VN ARG+SRYITQKN HN PN+LE
Sbjct: 18 CVRKSVNKEARGVSRYITQKNRHNTPNRLE 47
Score = 33.5 bits (75), Expect(2) = 3e-06
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -1
Query: 138 RKFCSNCYEYTIHWEIKK 85
RKFC CY++TIH EIKK
Sbjct: 49 RKFCPYCYKHTIHGEIKK 66
>ref|YP_008963501.1| ribosomal protein L33 (chloroplast) [Penthorum chinense]
gi|403226802|gb|AFR25681.1| ribosomal protein L33
(chloroplast) [Penthorum chinense]
Length = 66
Score = 42.7 bits (99), Expect(2) = 4e-06
Identities = 22/38 (57%), Positives = 27/38 (71%), Gaps = 3/38 (7%)
Frame = -2
Query: 242 TINFHCSSDKVNGL---ARGISRYITQKNLHNMPNQLE 138
T+ C+S NGL +RGISRYITQKN HN P++LE
Sbjct: 10 TVILECTSCVRNGLNKESRGISRYITQKNRHNTPSRLE 47
Score = 34.7 bits (78), Expect(2) = 4e-06
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = -1
Query: 138 RKFCSNCYEYTIHWEIKK 85
RKFC +CY++TIH EIKK
Sbjct: 49 RKFCPHCYKHTIHGEIKK 66
>gb|ACC95218.1| ribosomal protein L33 [Eudianthe laeta]
Length = 66
Score = 43.5 bits (101), Expect(2) = 5e-06
Identities = 20/30 (66%), Positives = 22/30 (73%)
Frame = -2
Query: 227 CSSDKVNGLARGISRYITQKNLHNMPNQLE 138
C VN +RGISRYITQKN HN PN+LE
Sbjct: 18 CVRKSVNKESRGISRYITQKNRHNTPNRLE 47
Score = 33.5 bits (75), Expect(2) = 5e-06
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -1
Query: 138 RKFCSNCYEYTIHWEIKK 85
RKFC CY++TIH EIKK
Sbjct: 49 RKFCPYCYKHTIHGEIKK 66
>ref|YP_005089428.1| rpl33 gene product (chloroplast) [Silene noctiflora]
gi|329755616|gb|AEC04178.1| ribosomal protein L33
(chloroplast) [Silene noctiflora]
Length = 66
Score = 43.1 bits (100), Expect(2) = 7e-06
Identities = 19/30 (63%), Positives = 22/30 (73%)
Frame = -2
Query: 227 CSSDKVNGLARGISRYITQKNLHNMPNQLE 138
C VN +RG+SRYITQKN HN PN+LE
Sbjct: 18 CVRKSVNKESRGVSRYITQKNRHNTPNRLE 47
Score = 33.5 bits (75), Expect(2) = 7e-06
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -1
Query: 138 RKFCSNCYEYTIHWEIKK 85
RKFC CY++TIH EIKK
Sbjct: 49 RKFCPYCYKHTIHGEIKK 66
>gb|ABY85755.1| ribosomal protein L33 [Silene aegyptiaca]
Length = 66
Score = 43.1 bits (100), Expect(2) = 7e-06
Identities = 19/30 (63%), Positives = 22/30 (73%)
Frame = -2
Query: 227 CSSDKVNGLARGISRYITQKNLHNMPNQLE 138
C VN +RG+SRYITQKN HN PN+LE
Sbjct: 18 CVRKSVNKESRGVSRYITQKNRHNTPNRLE 47
Score = 33.5 bits (75), Expect(2) = 7e-06
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -1
Query: 138 RKFCSNCYEYTIHWEIKK 85
RKFC CY++TIH EIKK
Sbjct: 49 RKFCPYCYKHTIHGEIKK 66
>gb|ABY85650.1| ribosomal protein L33 [Silene cryptoneura]
Length = 66
Score = 43.1 bits (100), Expect(2) = 7e-06
Identities = 19/30 (63%), Positives = 22/30 (73%)
Frame = -2
Query: 227 CSSDKVNGLARGISRYITQKNLHNMPNQLE 138
C VN +RG+SRYITQKN HN PN+LE
Sbjct: 18 CVRKSVNKESRGVSRYITQKNRHNTPNRLE 47
Score = 33.5 bits (75), Expect(2) = 7e-06
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -1
Query: 138 RKFCSNCYEYTIHWEIKK 85
RKFC CY++TIH EIKK
Sbjct: 49 RKFCPYCYKHTIHGEIKK 66
>ref|YP_005089517.1| rpl33 gene product (chloroplast) [Silene conica]
gi|166235700|gb|ABY85608.1| ribosomal protein L33
[Silene conica] gi|329755460|gb|AEC04024.1| ribosomal
protein L33 (chloroplast) [Silene conica]
Length = 66
Score = 43.1 bits (100), Expect(2) = 7e-06
Identities = 19/30 (63%), Positives = 22/30 (73%)
Frame = -2
Query: 227 CSSDKVNGLARGISRYITQKNLHNMPNQLE 138
C VN +RG+SRYITQKN HN PN+LE
Sbjct: 18 CVRKSVNKESRGVSRYITQKNRHNTPNRLE 47
Score = 33.5 bits (75), Expect(2) = 7e-06
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -1
Query: 138 RKFCSNCYEYTIHWEIKK 85
RKFC CY++TIH EIKK
Sbjct: 49 RKFCPYCYKHTIHGEIKK 66