BLASTX nr result

ID: Catharanthus23_contig00014436 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00014436
         (350 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002965753.1| hypothetical protein SELMODRAFT_439227 [Sela...    63   3e-08
ref|XP_002975843.1| hypothetical protein SELMODRAFT_442986 [Sela...    62   8e-08
gb|ABK25802.1| unknown [Picea sitchensis]                              59   5e-07
ref|XP_001756713.1| predicted protein [Physcomitrella patens] gi...    59   7e-07
gb|EXC32130.1| putative enoyl-CoA hydratase [Morus notabilis]          57   2e-06
ref|XP_002528495.1| carnitine racemase, putative [Ricinus commun...    56   6e-06
ref|XP_006836181.1| hypothetical protein AMTR_s00101p00062870 [A...    55   9e-06

>ref|XP_002965753.1| hypothetical protein SELMODRAFT_439227 [Selaginella moellendorffii]
           gi|300166567|gb|EFJ33173.1| hypothetical protein
           SELMODRAFT_439227 [Selaginella moellendorffii]
          Length = 243

 Score = 63.2 bits (152), Expect = 3e-08
 Identities = 32/69 (46%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
 Frame = +3

Query: 117 KNNFCKLD*FEGGIYLMNFIG-NSQHRFRPESLQFIDALLGQVLMDKTASALITTNEGKF 293
           + +F KL+    G+Y++ F G + QHR  P S+  I + L +V  D  A+ALITTNEGKF
Sbjct: 4   EKSFVKLEALPHGVYVLKFDGGDGQHRLNPTSIAEIHSALDKVEDDPKAAALITTNEGKF 63

Query: 294 FSNGMDVNY 320
           FSNG+D+ +
Sbjct: 64  FSNGLDLGF 72


>ref|XP_002975843.1| hypothetical protein SELMODRAFT_442986 [Selaginella moellendorffii]
           gi|300156119|gb|EFJ22748.1| hypothetical protein
           SELMODRAFT_442986 [Selaginella moellendorffii]
          Length = 243

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 31/69 (44%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
 Frame = +3

Query: 117 KNNFCKLD*FEGGIYLMNFIG-NSQHRFRPESLQFIDALLGQVLMDKTASALITTNEGKF 293
           + +F KL+    G+Y++ F G + QHR  P ++  I + L +V  D  A+ALITTNEGKF
Sbjct: 4   EESFVKLEALPHGVYVLKFDGGDGQHRLNPTTIAEIHSALDKVEDDPKAAALITTNEGKF 63

Query: 294 FSNGMDVNY 320
           FSNG+D+ +
Sbjct: 64  FSNGLDLGF 72


>gb|ABK25802.1| unknown [Picea sitchensis]
          Length = 235

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 23/60 (38%), Positives = 40/60 (66%)
 Frame = +3

Query: 150 GGIYLMNFIGNSQHRFRPESLQFIDALLGQVLMDKTASALITTNEGKFFSNGMDVNYLKK 329
           G +Y++  +G+  HRF P ++  I A L +V     A AL+TTN+G++FSNG+D+ ++ +
Sbjct: 8   GRVYILTLLGDGDHRFNPSTIDAISAALKEVQDSPDAGALVTTNQGRYFSNGLDLQWISQ 67


>ref|XP_001756713.1| predicted protein [Physcomitrella patens]
           gi|162692309|gb|EDQ78667.1| predicted protein
           [Physcomitrella patens]
          Length = 205

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 25/56 (44%), Positives = 39/56 (69%)
 Frame = +3

Query: 150 GGIYLMNFIGNSQHRFRPESLQFIDALLGQVLMDKTASALITTNEGKFFSNGMDVN 317
           G +Y++  +G+ +HRF P+S+  I A L +V  D  A AL+TT EGKF+SNG+ ++
Sbjct: 1   GNVYVLTLVGDGEHRFTPQSIPEIMAALDKVEADPKACALVTTGEGKFYSNGLSLS 56


>gb|EXC32130.1| putative enoyl-CoA hydratase [Morus notabilis]
          Length = 233

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 28/67 (41%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
 Frame = +3

Query: 150 GGIYLMNFIGNSQHRFRPESLQFIDALLGQVLMDKT-ASALITTNEGKFFSNGMDVNYLK 326
           G I+++  +G  +HR  P  +  I + LG+V  + T +SALITT EGKFFSNG D+ +L+
Sbjct: 8   GNIFILTLMGPGEHRLNPTLIDEIRSALGRVRAESTTSSALITTAEGKFFSNGFDLQWLE 67

Query: 327 KCDNKAA 347
              ++ A
Sbjct: 68  SSPDRQA 74


>ref|XP_002528495.1| carnitine racemase, putative [Ricinus communis]
           gi|223532104|gb|EEF33912.1| carnitine racemase, putative
           [Ricinus communis]
          Length = 246

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 28/78 (35%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
 Frame = +3

Query: 114 EKNNFCKLD*FEGGIYLMNFIGNSQHRFRPESLQFIDALLGQVLMDKTA--SALITTNEG 287
           EK   C L+  +G I+++   G+ +HR  P+ +  I + L  V    T+  S LITT +G
Sbjct: 6   EKKEICTLE-KKGNIFILTLTGSGEHRLNPDLIDSIRSALRTVCAKSTSPSSVLITTAQG 64

Query: 288 KFFSNGMDVNYLKKCDNK 341
           KFFSNG+D+ + + C  +
Sbjct: 65  KFFSNGLDLAWAQSCQQR 82


>ref|XP_006836181.1| hypothetical protein AMTR_s00101p00062870 [Amborella trichopoda]
           gi|548838681|gb|ERM99034.1| hypothetical protein
           AMTR_s00101p00062870 [Amborella trichopoda]
          Length = 548

 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 25/65 (38%), Positives = 41/65 (63%)
 Frame = +3

Query: 129 CKLD*FEGGIYLMNFIGNSQHRFRPESLQFIDALLGQVLMDKTASALITTNEGKFFSNGM 308
           CKL+  +G ++++   G+  HRF P S++ I   L  V       AL+TTNEG++FSNG+
Sbjct: 12  CKLE-KKGNVFVLTLTGDGDHRFNPSSIEDITQALDFVHKAPGPKALVTTNEGRYFSNGL 70

Query: 309 DVNYL 323
           D+ ++
Sbjct: 71  DLKWI 75


Top