BLASTX nr result
ID: Catharanthus23_contig00014190
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00014190
(692 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004228574.1| PREDICTED: LOW QUALITY PROTEIN: 50S ribosoma... 84 3e-14
ref|XP_003605596.1| 50S ribosomal protein L2-B [Medicago truncat... 69 1e-09
gb|EXC28024.1| 50S ribosomal protein L2 [Morus notabilis] 69 2e-09
gb|EXB89255.1| hypothetical protein L484_006809 [Morus notabilis] 69 2e-09
ref|XP_004309313.1| PREDICTED: 50S ribosomal protein L2, chlorop... 69 2e-09
ref|YP_008592707.1| ribosomal protein L2 (chloroplast) [Berberis... 67 7e-09
ref|XP_002515004.1| 50S ribosomal protein L2, putative [Ricinus ... 65 2e-08
gb|AFS35548.1| ribosomal protein L2, partial [Fragaria pentaphylla] 65 3e-08
ref|XP_003606061.1| 50S ribosomal protein L2-B [Medicago truncat... 65 3e-08
emb|CAD29834.2| putative ribosomal protein L2 [Vitis vinifera] 58 3e-06
gb|AFK37971.1| unknown [Lotus japonicus] 57 4e-06
tpg|DAA38481.1| TPA: hypothetical protein ZEAMMB73_861794, parti... 56 9e-06
>ref|XP_004228574.1| PREDICTED: LOW QUALITY PROTEIN: 50S ribosomal protein L2,
chloroplastic-like [Solanum lycopersicum]
Length = 414
Score = 84.3 bits (207), Expect = 3e-14
Identities = 42/57 (73%), Positives = 45/57 (78%)
Frame = +3
Query: 159 QVIEFSSSSYKIIDSRDIVIWRRQNCFKHRQNRKRPFFQREEDGLFTFHLMVRGELK 329
QVIEFSSSSYKIIDSRDIVIWRRQNCFKHRQNRKRPFF + G H+ G+ K
Sbjct: 132 QVIEFSSSSYKIIDSRDIVIWRRQNCFKHRQNRKRPFFXKR--GGRVIHISFDGQRK 186
Score = 66.2 bits (160), Expect = 9e-09
Identities = 31/33 (93%), Positives = 31/33 (93%)
Frame = +2
Query: 593 RKPYAL*EACTVWEGVLIDQKEESTSTDMPLGT 691
RKPYAL EACTVWEGVLID KEESTSTDMPLGT
Sbjct: 185 RKPYALEEACTVWEGVLIDXKEESTSTDMPLGT 217
>ref|XP_003605596.1| 50S ribosomal protein L2-B [Medicago truncatula]
gi|355506651|gb|AES87793.1| 50S ribosomal protein L2-B
[Medicago truncatula]
Length = 399
Score = 68.9 bits (167), Expect = 1e-09
Identities = 33/57 (57%), Positives = 38/57 (66%)
Frame = +3
Query: 159 QVIEFSSSSYKIIDSRDIVIWRRQNCFKHRQNRKRPFFQREEDGLFTFHLMVRGELK 329
QVIEF S SYKIID +DIVIWRRQNCFKHRQN K F+ + H+ G+ K
Sbjct: 115 QVIEFGSFSYKIIDPKDIVIWRRQNCFKHRQNTKLSLFRFKRGKTRVIHISFDGQRK 171
Score = 68.6 bits (166), Expect = 2e-09
Identities = 32/33 (96%), Positives = 32/33 (96%)
Frame = +2
Query: 593 RKPYAL*EACTVWEGVLIDQKEESTSTDMPLGT 691
RKPYAL EACTVWEGVLIDQKEESTSTDMPLGT
Sbjct: 170 RKPYALEEACTVWEGVLIDQKEESTSTDMPLGT 202
>gb|EXC28024.1| 50S ribosomal protein L2 [Morus notabilis]
Length = 200
Score = 68.6 bits (166), Expect = 2e-09
Identities = 32/33 (96%), Positives = 32/33 (96%)
Frame = +2
Query: 593 RKPYAL*EACTVWEGVLIDQKEESTSTDMPLGT 691
RKPYAL EACTVWEGVLIDQKEESTSTDMPLGT
Sbjct: 31 RKPYALEEACTVWEGVLIDQKEESTSTDMPLGT 63
>gb|EXB89255.1| hypothetical protein L484_006809 [Morus notabilis]
Length = 97
Score = 68.6 bits (166), Expect = 2e-09
Identities = 32/33 (96%), Positives = 32/33 (96%)
Frame = +2
Query: 593 RKPYAL*EACTVWEGVLIDQKEESTSTDMPLGT 691
RKPYAL EACTVWEGVLIDQKEESTSTDMPLGT
Sbjct: 31 RKPYALEEACTVWEGVLIDQKEESTSTDMPLGT 63
>ref|XP_004309313.1| PREDICTED: 50S ribosomal protein L2, chloroplastic-like, partial
[Fragaria vesca subsp. vesca]
Length = 170
Score = 68.6 bits (166), Expect = 2e-09
Identities = 32/33 (96%), Positives = 32/33 (96%)
Frame = +2
Query: 593 RKPYAL*EACTVWEGVLIDQKEESTSTDMPLGT 691
RKPYAL EACTVWEGVLIDQKEESTSTDMPLGT
Sbjct: 1 RKPYALEEACTVWEGVLIDQKEESTSTDMPLGT 33
>ref|YP_008592707.1| ribosomal protein L2 (chloroplast) [Berberis bealei]
gi|536462748|gb|AGU37113.1| ribosomal protein L2
(chloroplast) [Berberis bealei]
Length = 310
Score = 66.6 bits (161), Expect = 7e-09
Identities = 31/32 (96%), Positives = 31/32 (96%)
Frame = +2
Query: 596 KPYAL*EACTVWEGVLIDQKEESTSTDMPLGT 691
KPYAL EACTVWEGVLIDQKEESTSTDMPLGT
Sbjct: 142 KPYALEEACTVWEGVLIDQKEESTSTDMPLGT 173
>ref|XP_002515004.1| 50S ribosomal protein L2, putative [Ricinus communis]
gi|223546055|gb|EEF47558.1| 50S ribosomal protein L2,
putative [Ricinus communis]
Length = 111
Score = 65.1 bits (157), Expect = 2e-08
Identities = 30/33 (90%), Positives = 31/33 (93%)
Frame = +2
Query: 593 RKPYAL*EACTVWEGVLIDQKEESTSTDMPLGT 691
RKPYAL EACTVWE +LIDQKEESTSTDMPLGT
Sbjct: 11 RKPYALEEACTVWEEILIDQKEESTSTDMPLGT 43
>gb|AFS35548.1| ribosomal protein L2, partial [Fragaria pentaphylla]
Length = 122
Score = 64.7 bits (156), Expect = 3e-08
Identities = 30/31 (96%), Positives = 30/31 (96%)
Frame = +2
Query: 599 PYAL*EACTVWEGVLIDQKEESTSTDMPLGT 691
PYAL EACTVWEGVLIDQKEESTSTDMPLGT
Sbjct: 1 PYALEEACTVWEGVLIDQKEESTSTDMPLGT 31
>ref|XP_003606061.1| 50S ribosomal protein L2-B [Medicago truncatula]
gi|355507116|gb|AES88258.1| 50S ribosomal protein L2-B
[Medicago truncatula]
Length = 382
Score = 64.7 bits (156), Expect = 3e-08
Identities = 30/31 (96%), Positives = 30/31 (96%)
Frame = +2
Query: 599 PYAL*EACTVWEGVLIDQKEESTSTDMPLGT 691
PYAL EACTVWEGVLIDQKEESTSTDMPLGT
Sbjct: 235 PYALEEACTVWEGVLIDQKEESTSTDMPLGT 265
>emb|CAD29834.2| putative ribosomal protein L2 [Vitis vinifera]
Length = 163
Score = 57.8 bits (138), Expect = 3e-06
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = +2
Query: 614 EACTVWEGVLIDQKEESTSTDMPLGT 691
EACTVWEGVLIDQKEESTSTDMPLGT
Sbjct: 1 EACTVWEGVLIDQKEESTSTDMPLGT 26
>gb|AFK37971.1| unknown [Lotus japonicus]
Length = 27
Score = 57.4 bits (137), Expect = 4e-06
Identities = 24/27 (88%), Positives = 26/27 (96%)
Frame = +3
Query: 561 IHLYRYHHLHPESRMLCKKLVQFGKGF 641
+HLYRYHHLHPESRML KKLVQFG+GF
Sbjct: 1 MHLYRYHHLHPESRMLWKKLVQFGRGF 27
>tpg|DAA38481.1| TPA: hypothetical protein ZEAMMB73_861794, partial [Zea mays]
Length = 137
Score = 56.2 bits (134), Expect = 9e-06
Identities = 31/35 (88%), Positives = 31/35 (88%)
Frame = -3
Query: 690 VPKGISVEVDSSF*SIKTPSQTVQASYKAYGFLDV 586
VPKGISVEVDSSF S K PSQTVQAS KAYGFLDV
Sbjct: 103 VPKGISVEVDSSFFS-KNPSQTVQASSKAYGFLDV 136