BLASTX nr result
ID: Catharanthus23_contig00013890
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00013890
(2032 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006338488.1| PREDICTED: putative pentatricopeptide repeat... 636 e-179
emb|CBI35029.3| unnamed protein product [Vitis vinifera] 613 e-173
ref|XP_002276684.1| PREDICTED: putative pentatricopeptide repeat... 613 e-173
ref|XP_004233685.1| PREDICTED: putative pentatricopeptide repeat... 608 e-171
gb|EMJ17608.1| hypothetical protein PRUPE_ppa022709mg, partial [... 600 e-169
ref|XP_004304947.1| PREDICTED: pentatricopeptide repeat-containi... 569 e-159
ref|NP_189507.2| pentatricopeptide repeat-containing protein [Ar... 526 e-146
ref|NP_189505.2| putative pentatricopeptide repeat-containing pr... 521 e-145
ref|XP_006290938.1| hypothetical protein CARUB_v10017051mg [Caps... 521 e-145
gb|EOY03349.1| Tetratricopeptide repeat (TPR)-like superfamily p... 516 e-143
ref|XP_006395353.1| hypothetical protein EUTSA_v10005682mg [Eutr... 513 e-142
gb|EXB36666.1| hypothetical protein L484_002079 [Morus notabilis] 509 e-141
ref|XP_002877120.1| pentatricopeptide repeat-containing protein ... 447 e-123
ref|XP_002517451.1| pentatricopeptide repeat-containing protein,... 410 e-111
ref|NP_001173276.1| Os03g0158900 [Oryza sativa Japonica Group] g... 365 4e-98
gb|EMT01880.1| hypothetical protein F775_14784 [Aegilops tauschii] 363 2e-97
ref|XP_006650550.1| PREDICTED: pentatricopeptide repeat-containi... 362 4e-97
gb|EMS68422.1| hypothetical protein TRIUR3_23855 [Triticum urartu] 361 6e-97
ref|XP_002439151.1| hypothetical protein SORBIDRAFT_09g001360 [S... 359 2e-96
ref|XP_004981863.1| PREDICTED: putative pentatricopeptide repeat... 358 4e-96
>ref|XP_006338488.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g28640-like [Solanum tuberosum]
Length = 512
Score = 636 bits (1640), Expect = e-179
Identities = 307/498 (61%), Positives = 382/498 (76%), Gaps = 2/498 (0%)
Frame = +2
Query: 149 SDRSIKAWRWCMSLAQRCINMGQLKTIHAIFIAHGIHRNSYAVGKLISFCTLSENGDISY 328
++ S + W+WCMS+A++C N+GQLK IHAI+I G+HRN+YAV KL+ FC LS GD+SY
Sbjct: 13 ANNSFQIWKWCMSMAEKCTNIGQLKAIHAIYITLGLHRNTYAVSKLLDFCALSNTGDLSY 72
Query: 329 GSFLFSQLPNPNSFVYNNLIRAYSRSPQPQLAVNYFNLML--NSRLRPDGYTFPFVFMAC 502
S +F+Q+ PN+F+YN LIRAYS S QPQ ++NYFNLML ++ PD +TFPF+ +AC
Sbjct: 73 ASRIFAQVQTPNTFLYNALIRAYSSSSQPQFSLNYFNLMLQTSNAAAPDSFTFPFLIIAC 132
Query: 503 ANGFLWSEGRQLHTWVIKNGIFESNAHVQSALVRFYAEHKVLDDARKVFDEITNVDAIQC 682
ANG L EG+Q+H+WVIKN SNAHVQ+AL+RFY K LDDARKVFDEIT++D IQC
Sbjct: 133 ANGPLEVEGKQIHSWVIKNSFSASNAHVQTALIRFYTNCKALDDARKVFDEITDIDVIQC 192
Query: 683 NILINGYVKCGMALEAQDVFRNMLVRGIEPDEFCLTTALTACAQLGDLDQGKWIHEYVKN 862
N+L++G+++ G+A EA +F++ML RG+ PDE+C+TTAL ACAQLG L+QGKWIHE+V
Sbjct: 193 NVLMSGHLQSGLAKEALSIFQDMLGRGVGPDEYCVTTALGACAQLGALEQGKWIHEHVTK 252
Query: 863 RKNLRVADEFLGTALVDMYAKCGYIDTAEEVFSRMPKRNKFSWAAIIGGYAVHGCANQAF 1042
+ L D F+G+ALVDMYAKCG I+ A EVF MPKRNK SWA +I G+AVHG A
Sbjct: 253 SEWLEY-DVFIGSALVDMYAKCGCINMASEVFESMPKRNKHSWATMIRGFAVHGRPELAI 311
Query: 1043 QCLERMQAEDGIMPDGIAVLGVLAACKHAGLVKQGQFLLENMESLYGLVPEHEHYSCVVD 1222
CLERMQ DG+ PDG+ +L VLAAC H+GL K+GQ LL+ MESLYG+ PEHEH+SCVVD
Sbjct: 312 SCLERMQVADGLKPDGVVILAVLAACAHSGLQKEGQGLLDEMESLYGVTPEHEHFSCVVD 371
Query: 1223 LLCRAGQLGEAVELIRRMPMKPLASVWGALLSGCRSHNNVIFXXXXXXXXXXXXXXXXXX 1402
LLCRAG+L +A++LIRRMPMKP ASVWGALLSGCR+HNNV
Sbjct: 372 LLCRAGRLDDALKLIRRMPMKPRASVWGALLSGCRNHNNVNLAELAVKEILLVEDGNEAE 431
Query: 1403 XXXAYVQLSNIYLGARQYDDARRIRRMIGEKGLKKTPGYSAVEIDGLFHEFISGDVSHSR 1582
AYVQLSNIYL ARQ DDARRIRR IG++GL+KTPGYSA+EIDG+ +EFISGDVSH+
Sbjct: 432 EDSAYVQLSNIYLAARQCDDARRIRRRIGDRGLRKTPGYSAIEIDGMINEFISGDVSHTC 491
Query: 1583 LGEIHAVLYLMSLEVSID 1636
L +IH VL L L+ ID
Sbjct: 492 LADIHKVLDLTYLDPEID 509
>emb|CBI35029.3| unnamed protein product [Vitis vinifera]
Length = 1596
Score = 613 bits (1581), Expect = e-173
Identities = 298/491 (60%), Positives = 371/491 (75%), Gaps = 1/491 (0%)
Frame = +2
Query: 161 IKAWRWCMSLAQRCINMGQLKTIHAIFIAHGIHRNSYAVGKLISFCTLSENGDISYGSFL 340
++AW+ C+SLAQ C NM Q K IHA+FI +G+H N+YA+ KLISFC LS +G +SY S +
Sbjct: 1 MEAWKRCISLAQSCSNMRQFKAIHALFIVNGLHLNNYAISKLISFCALSNSGSLSYASLI 60
Query: 341 FSQLPNPNSFVYNNLIRAYSRSPQPQLAVNYFNLMLNSR-LRPDGYTFPFVFMACANGFL 517
FSQ+ NPN F YN LIRAYSRS PQLA++YF LML+ + PD +TFPF+ AC N
Sbjct: 61 FSQIQNPNLFAYNTLIRAYSRSSTPQLALHYFQLMLDDENVGPDQHTFPFIISACTNSLW 120
Query: 518 WSEGRQLHTWVIKNGIFESNAHVQSALVRFYAEHKVLDDARKVFDEITNVDAIQCNILIN 697
G+Q+H WV+KNG+ S+ HVQ+ALVRFYAE + DARK+FDEI N+D +Q N+L+N
Sbjct: 121 MLLGKQIHNWVLKNGVASSDRHVQTALVRFYAECCAMGDARKLFDEIPNLDVVQWNVLLN 180
Query: 698 GYVKCGMALEAQDVFRNMLVRGIEPDEFCLTTALTACAQLGDLDQGKWIHEYVKNRKNLR 877
GYV+ G+A EA + FRNMLV G+EPDEFCLTTAL CAQLG L QGKWIHEYV RK L
Sbjct: 181 GYVRRGLAPEALNAFRNMLVSGVEPDEFCLTTALKGCAQLGALQQGKWIHEYVTKRKWLE 240
Query: 878 VADEFLGTALVDMYAKCGYIDTAEEVFSRMPKRNKFSWAAIIGGYAVHGCANQAFQCLER 1057
AD F+GTALVDMYAKCG ID + EVF M KRN FSW+A+IGG+A+HG +A QCLER
Sbjct: 241 -ADVFIGTALVDMYAKCGCIDRSVEVFEGMTKRNVFSWSAMIGGFALHGHVRKAMQCLER 299
Query: 1058 MQAEDGIMPDGIAVLGVLAACKHAGLVKQGQFLLENMESLYGLVPEHEHYSCVVDLLCRA 1237
MQ EDG+ PDG+ +LGV+ AC HAGL ++GQFLLENME+ YG++P+HEHYSC+VDLLCRA
Sbjct: 300 MQVEDGLRPDGVVLLGVIMACAHAGLQEEGQFLLENMEARYGILPKHEHYSCMVDLLCRA 359
Query: 1238 GQLGEAVELIRRMPMKPLASVWGALLSGCRSHNNVIFXXXXXXXXXXXXXXXXXXXXXAY 1417
GQL EA++LIRRMPMKP A+VWGALLSGCR+HNNV AY
Sbjct: 360 GQLDEALKLIRRMPMKPRAAVWGALLSGCRTHNNVDLAELAARELLMVGNGDGTEEDGAY 419
Query: 1418 VQLSNIYLGARQYDDARRIRRMIGEKGLKKTPGYSAVEIDGLFHEFISGDVSHSRLGEIH 1597
VQLSNIYL A++ +DA RIRRMIG+K +K PG S +E++G ++F+SGD+SH L +IH
Sbjct: 420 VQLSNIYLAAQKCEDACRIRRMIGDKRIKTKPGCSLIEVEGEVNQFVSGDISHPCLAQIH 479
Query: 1598 AVLYLMSLEVS 1630
+L L+SL+ S
Sbjct: 480 EMLDLVSLQHS 490
>ref|XP_002276684.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g28640-like [Vitis vinifera]
Length = 511
Score = 613 bits (1581), Expect = e-173
Identities = 298/491 (60%), Positives = 371/491 (75%), Gaps = 1/491 (0%)
Frame = +2
Query: 161 IKAWRWCMSLAQRCINMGQLKTIHAIFIAHGIHRNSYAVGKLISFCTLSENGDISYGSFL 340
++AW+ C+SLAQ C NM Q K IHA+FI +G+H N+YA+ KLISFC LS +G +SY S +
Sbjct: 1 MEAWKRCISLAQSCSNMRQFKAIHALFIVNGLHLNNYAISKLISFCALSNSGSLSYASLI 60
Query: 341 FSQLPNPNSFVYNNLIRAYSRSPQPQLAVNYFNLMLNSR-LRPDGYTFPFVFMACANGFL 517
FSQ+ NPN F YN LIRAYSRS PQLA++YF LML+ + PD +TFPF+ AC N
Sbjct: 61 FSQIQNPNLFAYNTLIRAYSRSSTPQLALHYFQLMLDDENVGPDQHTFPFIISACTNSLW 120
Query: 518 WSEGRQLHTWVIKNGIFESNAHVQSALVRFYAEHKVLDDARKVFDEITNVDAIQCNILIN 697
G+Q+H WV+KNG+ S+ HVQ+ALVRFYAE + DARK+FDEI N+D +Q N+L+N
Sbjct: 121 MLLGKQIHNWVLKNGVASSDRHVQTALVRFYAECCAMGDARKLFDEIPNLDVVQWNVLLN 180
Query: 698 GYVKCGMALEAQDVFRNMLVRGIEPDEFCLTTALTACAQLGDLDQGKWIHEYVKNRKNLR 877
GYV+ G+A EA + FRNMLV G+EPDEFCLTTAL CAQLG L QGKWIHEYV RK L
Sbjct: 181 GYVRRGLAPEALNAFRNMLVSGVEPDEFCLTTALKGCAQLGALQQGKWIHEYVTKRKWLE 240
Query: 878 VADEFLGTALVDMYAKCGYIDTAEEVFSRMPKRNKFSWAAIIGGYAVHGCANQAFQCLER 1057
AD F+GTALVDMYAKCG ID + EVF M KRN FSW+A+IGG+A+HG +A QCLER
Sbjct: 241 -ADVFIGTALVDMYAKCGCIDRSVEVFEGMTKRNVFSWSAMIGGFALHGHVRKAMQCLER 299
Query: 1058 MQAEDGIMPDGIAVLGVLAACKHAGLVKQGQFLLENMESLYGLVPEHEHYSCVVDLLCRA 1237
MQ EDG+ PDG+ +LGV+ AC HAGL ++GQFLLENME+ YG++P+HEHYSC+VDLLCRA
Sbjct: 300 MQVEDGLRPDGVVLLGVIMACAHAGLQEEGQFLLENMEARYGILPKHEHYSCMVDLLCRA 359
Query: 1238 GQLGEAVELIRRMPMKPLASVWGALLSGCRSHNNVIFXXXXXXXXXXXXXXXXXXXXXAY 1417
GQL EA++LIRRMPMKP A+VWGALLSGCR+HNNV AY
Sbjct: 360 GQLDEALKLIRRMPMKPRAAVWGALLSGCRTHNNVDLAELAARELLMVGNGDGTEEDGAY 419
Query: 1418 VQLSNIYLGARQYDDARRIRRMIGEKGLKKTPGYSAVEIDGLFHEFISGDVSHSRLGEIH 1597
VQLSNIYL A++ +DA RIRRMIG+K +K PG S +E++G ++F+SGD+SH L +IH
Sbjct: 420 VQLSNIYLAAQKCEDACRIRRMIGDKRIKTKPGCSLIEVEGEVNQFVSGDISHPCLAQIH 479
Query: 1598 AVLYLMSLEVS 1630
+L L+SL+ S
Sbjct: 480 EMLDLVSLQHS 490
>ref|XP_004233685.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g28640-like [Solanum lycopersicum]
Length = 487
Score = 608 bits (1569), Expect = e-171
Identities = 297/485 (61%), Positives = 370/485 (76%), Gaps = 2/485 (0%)
Frame = +2
Query: 188 LAQRCINMGQLKTIHAIFIAHGIHRNSYAVGKLISFCTLSENGDISYGSFLFSQLPNPNS 367
+A++C NM QLK IHAI+I G+ RN+YAV KL+ FC LS +GD+SY S +F+Q+ PN+
Sbjct: 1 MAEKCNNMRQLKAIHAIYITLGLQRNTYAVSKLLDFCALSNSGDLSYASRIFAQVQTPNA 60
Query: 368 FVYNNLIRAYSRSPQPQLAVNYFNLML--NSRLRPDGYTFPFVFMACANGFLWSEGRQLH 541
F+YN LIRAYS SPQPQ+++NYFNLM+ ++ PD +TFPF+ +ACANG L EG+Q+H
Sbjct: 61 FLYNALIRAYSSSPQPQVSLNYFNLMVQTSNAAAPDSFTFPFLLIACANGPLEVEGKQIH 120
Query: 542 TWVIKNGIFESNAHVQSALVRFYAEHKVLDDARKVFDEITNVDAIQCNILINGYVKCGMA 721
+W+IKN SNAHVQ+AL+RFY K LDDARKVFDEIT++D IQCN+L++G+++ G+A
Sbjct: 121 SWIIKNSFSASNAHVQTALIRFYTNCKALDDARKVFDEITDIDVIQCNVLMSGHLQSGLA 180
Query: 722 LEAQDVFRNMLVRGIEPDEFCLTTALTACAQLGDLDQGKWIHEYVKNRKNLRVADEFLGT 901
EA +F++ML RG+ PDE+C+TTAL ACAQLG L+QGKWIHE+V + L D F+G+
Sbjct: 181 KEALSIFQDMLGRGVGPDEYCVTTALGACAQLGALEQGKWIHEHVTKSEWLEY-DVFIGS 239
Query: 902 ALVDMYAKCGYIDTAEEVFSRMPKRNKFSWAAIIGGYAVHGCANQAFQCLERMQAEDGIM 1081
ALVDMYAKCG I+ A EVF MP RNK SWA +I G+AVHG A CLERMQ DG+
Sbjct: 240 ALVDMYAKCGSINLASEVFESMPTRNKHSWATMIRGFAVHGRPELALSCLERMQVADGLK 299
Query: 1082 PDGIAVLGVLAACKHAGLVKQGQFLLENMESLYGLVPEHEHYSCVVDLLCRAGQLGEAVE 1261
PDG+ +L VLAAC H+GL K+GQ LL+ MESLYG+ PEHEH+SCVVDLLCRAG+L +A++
Sbjct: 300 PDGVVILAVLAACAHSGLQKEGQGLLDEMESLYGVTPEHEHFSCVVDLLCRAGRLDDALK 359
Query: 1262 LIRRMPMKPLASVWGALLSGCRSHNNVIFXXXXXXXXXXXXXXXXXXXXXAYVQLSNIYL 1441
LIRRMPMKP ASVWGALLSGCR+HNNV AYVQLSNIYL
Sbjct: 360 LIRRMPMKPRASVWGALLSGCRNHNNVNLAELAVKEILLVEDGNEAEEDSAYVQLSNIYL 419
Query: 1442 GARQYDDARRIRRMIGEKGLKKTPGYSAVEIDGLFHEFISGDVSHSRLGEIHAVLYLMSL 1621
ARQ DDARRIRR IG++GL+KTPGYSA+EIDG+ +EFISGDVSH L +IH VL L L
Sbjct: 420 AARQCDDARRIRRRIGDRGLRKTPGYSAIEIDGMVNEFISGDVSHICLADIHKVLDLTYL 479
Query: 1622 EVSID 1636
+ D
Sbjct: 480 DPHFD 484
>gb|EMJ17608.1| hypothetical protein PRUPE_ppa022709mg, partial [Prunus persica]
Length = 541
Score = 600 bits (1548), Expect = e-169
Identities = 299/479 (62%), Positives = 360/479 (75%), Gaps = 1/479 (0%)
Frame = +2
Query: 182 MSLAQRCINMGQLKTIHAIFIAHGIHRNSYAVGKLISFCTLSENGDISYGSFLFSQLPNP 361
MSLAQ C NM +LK HAIFI +G+H N+YA+ KLI+FC LS +GD+SY S LF+Q+ P
Sbjct: 1 MSLAQGCSNMRKLKATHAIFITNGLHLNNYAISKLIAFCALSNSGDLSYASLLFNQIQTP 60
Query: 362 NSFVYNNLIRAYSRSPQPQLAVNYFNLMLN-SRLRPDGYTFPFVFMACANGFLWSEGRQL 538
NS++YN LIRAYSRS QP LAV+YF LML S L PD YTF FV +ACAN GRQ+
Sbjct: 61 NSYLYNTLIRAYSRSSQPHLAVHYFLLMLKQSSLGPDNYTFNFVILACANCSWLVSGRQI 120
Query: 539 HTWVIKNGIFESNAHVQSALVRFYAEHKVLDDARKVFDEITNVDAIQCNILINGYVKCGM 718
H WV+KNG+F +AHVQ+ALVR YAE KVLDD++KVFDEI D IQ N+L+NGYV+CG+
Sbjct: 121 HNWVVKNGLFLVDAHVQTALVRLYAECKVLDDSKKVFDEIPERDVIQWNVLMNGYVRCGL 180
Query: 719 ALEAQDVFRNMLVRGIEPDEFCLTTALTACAQLGDLDQGKWIHEYVKNRKNLRVADEFLG 898
A EA VFR+MLV G EPD FC+ T L ACA LG L QGKWI EYVK R L+ +D F+G
Sbjct: 181 ASEALKVFRDMLVTGFEPDNFCVATGLAACAHLGALRQGKWIDEYVKKRTGLK-SDVFIG 239
Query: 899 TALVDMYAKCGYIDTAEEVFSRMPKRNKFSWAAIIGGYAVHGCANQAFQCLERMQAEDGI 1078
TALVDMYAKCG ID A E F MPKRN SWAA+IGG+A HGCA A LERMQ +DG+
Sbjct: 240 TALVDMYAKCGCIDLAVEAFEGMPKRNVVSWAAMIGGFAAHGCATNAIHSLERMQVDDGL 299
Query: 1079 MPDGIAVLGVLAACKHAGLVKQGQFLLENMESLYGLVPEHEHYSCVVDLLCRAGQLGEAV 1258
PDG+ +L VL AC HAGL+++G+ LL+NM++ YG+VP+HEHYSCV+DLLC+AG+L EA+
Sbjct: 300 RPDGVVLLVVLMACTHAGLLEKGKLLLDNMKTQYGIVPKHEHYSCVIDLLCKAGRLNEAL 359
Query: 1259 ELIRRMPMKPLASVWGALLSGCRSHNNVIFXXXXXXXXXXXXXXXXXXXXXAYVQLSNIY 1438
+LIR+MPMKPLASVWGALLSGCR HNNV AYVQLSNIY
Sbjct: 360 KLIRKMPMKPLASVWGALLSGCRIHNNVDLAELAVKELLQLENDVRGEEVGAYVQLSNIY 419
Query: 1439 LGARQYDDARRIRRMIGEKGLKKTPGYSAVEIDGLFHEFISGDVSHSRLGEIHAVLYLM 1615
LGAR+ +DA RIR+MIGE G+KKTPG S +E+DG +EF+SGDVSHS I A+L L+
Sbjct: 420 LGARRGEDAIRIRKMIGESGIKKTPGCSMIEVDGKVNEFVSGDVSHSHQAWICAMLDLI 478
>ref|XP_004304947.1| PREDICTED: pentatricopeptide repeat-containing protein At3g28660-like
[Fragaria vesca subsp. vesca]
Length = 501
Score = 569 bits (1467), Expect = e-159
Identities = 280/489 (57%), Positives = 352/489 (71%), Gaps = 1/489 (0%)
Frame = +2
Query: 161 IKAWRWCMSLAQRCINMGQLKTIHAIFIAHGIHRNSYAVGKLISFCTLSENGDISYGSFL 340
I+AW+ CMSLAQ C M LK HA+FI HG+H N++AV KL++FC LS++G + Y S +
Sbjct: 9 IQAWKRCMSLAQCCTTMRSLKPTHAVFITHGLHLNNFAVSKLLAFCALSDSGSLRYASLI 68
Query: 341 FSQLPNPNSFVYNNLIRAYSRSPQPQLAVNYFNLMLNS-RLRPDGYTFPFVFMACANGFL 517
F Q+P PN+++YN LIRA+S S P LA+ YF LM L PD +TF F + C N
Sbjct: 69 FHQVPAPNAYMYNTLIRAHSASSDPHLAMYYFQLMSKQIDLEPDNFTFHFAILGCVNCGW 128
Query: 518 WSEGRQLHTWVIKNGIFESNAHVQSALVRFYAEHKVLDDARKVFDEITNVDAIQCNILIN 697
GRQ+H V+KNG+ ++AHVQ+A+VR Y E VL DA KVFDEI D +Q N+++N
Sbjct: 129 IGPGRQMHCLVVKNGLVAADAHVQTAVVRLYVECGVLGDAHKVFDEIPERDMVQWNVIMN 188
Query: 698 GYVKCGMALEAQDVFRNMLVRGIEPDEFCLTTALTACAQLGDLDQGKWIHEYVKNRKNLR 877
GYVK G+A EA VF++MLVRG EPD FC+ T L ACA LG L QGKWIHEYV+ R+ L
Sbjct: 189 GYVKRGLASEALRVFQDMLVRGFEPDGFCVATGLAACAHLGALWQGKWIHEYVRKREGLN 248
Query: 878 VADEFLGTALVDMYAKCGYIDTAEEVFSRMPKRNKFSWAAIIGGYAVHGCANQAFQCLER 1057
+D F+GTALVDMYAKCG ID A E F M KRN SW+A+IG Y VHG A +A CLER
Sbjct: 249 -SDVFIGTALVDMYAKCGCIDLAVEAFEGMGKRNVVSWSAMIGAYGVHGYATEAISCLER 307
Query: 1058 MQAEDGIMPDGIAVLGVLAACKHAGLVKQGQFLLENMESLYGLVPEHEHYSCVVDLLCRA 1237
MQ +DG+ PDG+ +LGVL AC H GL+++G+ LL+NM++ YG+VP+HEHYSCV+DLLC+A
Sbjct: 308 MQVDDGVKPDGVVLLGVLTACNHGGLLEKGKALLDNMKAKYGIVPKHEHYSCVIDLLCKA 367
Query: 1238 GQLGEAVELIRRMPMKPLASVWGALLSGCRSHNNVIFXXXXXXXXXXXXXXXXXXXXXAY 1417
G+L +A ELIRRMPMKPLASVWGALLSGCR HNNV AY
Sbjct: 368 GRLSDAFELIRRMPMKPLASVWGALLSGCRIHNNVDLAEIAVEQLLQVANDDRGEEVGAY 427
Query: 1418 VQLSNIYLGARQYDDARRIRRMIGEKGLKKTPGYSAVEIDGLFHEFISGDVSHSRLGEIH 1597
VQLSNIYLGA++ +DA RIR+MIGEKG+KKTPG S +E+DG +EF+SGDVSHS +I
Sbjct: 428 VQLSNIYLGAQRSEDALRIRKMIGEKGIKKTPGCSMLEVDGKVNEFVSGDVSHSHCVQIC 487
Query: 1598 AVLYLMSLE 1624
+L L+S +
Sbjct: 488 TMLDLISAD 496
>ref|NP_189507.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273574|sp|Q9LJI9.1|PP260_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g28660 gi|9294280|dbj|BAB02182.1| unnamed protein
product [Arabidopsis thaliana] gi|20259531|gb|AAM13885.1|
unknown protein [Arabidopsis thaliana]
gi|24030460|gb|AAN41382.1| unknown protein [Arabidopsis
thaliana] gi|332643950|gb|AEE77471.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 504
Score = 526 bits (1354), Expect = e-146
Identities = 251/494 (50%), Positives = 353/494 (71%), Gaps = 5/494 (1%)
Frame = +2
Query: 164 KAWRWCMSLAQRCINMGQLKTIHAIFIAHGIHRNSYAVGKLIS-FCTLSE-NGDISYGSF 337
++W+ + +QRC + Q+K+ H++FI HG+HRN+YA+ KL++ F L N Y S
Sbjct: 9 QSWKSLILASQRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASS 68
Query: 338 LFSQLPNPNSFVYNNLIRAYSRSPQPQLAVNYFNLMLNSR---LRPDGYTFPFVFMACAN 508
+F + PNSFVY+ +IR SRS QP L + YF LM+ + P TF F+ +AC
Sbjct: 69 IFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLK 128
Query: 509 GFLWSEGRQLHTWVIKNGIFESNAHVQSALVRFYAEHKVLDDARKVFDEITNVDAIQCNI 688
+S G+Q+H WV+KNG+F S+ HVQ+ ++R Y E K+L DARKVFDEI D ++ ++
Sbjct: 129 ACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDV 188
Query: 689 LINGYVKCGMALEAQDVFRNMLVRGIEPDEFCLTTALTACAQLGDLDQGKWIHEYVKNRK 868
L+NGYV+CG+ E +VF+ MLVRGIEPDEF +TTALTACAQ+G L QGKWIHE+VK ++
Sbjct: 189 LMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKR 248
Query: 869 NLRVADEFLGTALVDMYAKCGYIDTAEEVFSRMPKRNKFSWAAIIGGYAVHGCANQAFQC 1048
+ +D F+GTALVDMYAKCG I+TA EVF ++ +RN FSWAA+IGGYA +G A +A C
Sbjct: 249 WIE-SDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTC 307
Query: 1049 LERMQAEDGIMPDGIAVLGVLAACKHAGLVKQGQFLLENMESLYGLVPEHEHYSCVVDLL 1228
L+R++ EDGI PD + +LGVLAAC H G +++G+ +LENME+ YG+ P+HEHYSC+VDL+
Sbjct: 308 LDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLM 367
Query: 1229 CRAGQLGEAVELIRRMPMKPLASVWGALLSGCRSHNNVIFXXXXXXXXXXXXXXXXXXXX 1408
CRAG+L +A++LI +MPMKPLASVWGALL+GCR+H NV
Sbjct: 368 CRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVQNLLDLEKGNVEEEE 427
Query: 1409 XAYVQLSNIYLGARQYDDARRIRRMIGEKGLKKTPGYSAVEIDGLFHEFISGDVSHSRLG 1588
A VQLSNIY ++ +A ++R MI ++G++KTPG+S +E+DG+ +F+SGDVSH L
Sbjct: 428 AALVQLSNIYFSVQRNPEAFKVRGMIEQRGIRKTPGWSLLEVDGIVTKFVSGDVSHPNLL 487
Query: 1589 EIHAVLYLMSLEVS 1630
+IH +++L+S++ S
Sbjct: 488 QIHTLIHLLSVDAS 501
>ref|NP_189505.2| putative pentatricopeptide repeat-containing protein [Arabidopsis
thaliana] gi|75273576|sp|Q9LJJ1.1|PP259_ARATH RecName:
Full=Putative pentatricopeptide repeat-containing protein
At3g28640 gi|9294278|dbj|BAB02180.1| unnamed protein
product [Arabidopsis thaliana]
gi|332643948|gb|AEE77469.1| putative pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 504
Score = 521 bits (1343), Expect = e-145
Identities = 251/492 (51%), Positives = 350/492 (71%), Gaps = 5/492 (1%)
Frame = +2
Query: 164 KAWRWCMSLAQRCINMGQLKTIHAIFIAHGIHRNSYAVGKLIS-FCTLSE-NGDISYGSF 337
++W+ + +QRC + Q+K+ H++FI HG+HRN+YA+ KL++ F L N Y S
Sbjct: 9 QSWKSLILASQRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASS 68
Query: 338 LFSQLPNPNSFVYNNLIRAYSRSPQPQLAVNYFNLMLNSR---LRPDGYTFPFVFMACAN 508
+F + PNSFVY+ +IR SRS QP L + YF LM+ + P TF F+ +AC
Sbjct: 69 IFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLK 128
Query: 509 GFLWSEGRQLHTWVIKNGIFESNAHVQSALVRFYAEHKVLDDARKVFDEITNVDAIQCNI 688
+S G+Q+H WV+KNG+F S++HVQ+ ++R Y E K+L DARKVFDEI D ++ ++
Sbjct: 129 ACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDV 188
Query: 689 LINGYVKCGMALEAQDVFRNMLVRGIEPDEFCLTTALTACAQLGDLDQGKWIHEYVKNRK 868
L+NGYV+CG+ E +VFR MLV+G+EPDEF +TTALTACAQ+G L QGKWIHE+VK +K
Sbjct: 189 LMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVK-KK 247
Query: 869 NLRVADEFLGTALVDMYAKCGYIDTAEEVFSRMPKRNKFSWAAIIGGYAVHGCANQAFQC 1048
+ +D F+GTALVDMYAKCG I+TA EVF ++ +RN FSWAA+IGGYA +G A +A C
Sbjct: 248 SWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTC 307
Query: 1049 LERMQAEDGIMPDGIAVLGVLAACKHAGLVKQGQFLLENMESLYGLVPEHEHYSCVVDLL 1228
LER++ EDGI PD + +LGVLAAC H G +++G+ +LENME+ Y + P+HEHYSC+VDL+
Sbjct: 308 LERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLM 367
Query: 1229 CRAGQLGEAVELIRRMPMKPLASVWGALLSGCRSHNNVIFXXXXXXXXXXXXXXXXXXXX 1408
CRAG+L +A+ LI +MPMKPLASVWGALL+GCR+H NV
Sbjct: 368 CRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVKNLLDLEKGNVEEEE 427
Query: 1409 XAYVQLSNIYLGARQYDDARRIRRMIGEKGLKKTPGYSAVEIDGLFHEFISGDVSHSRLG 1588
A VQLSNIY ++ +A ++R MI ++G++KTPG+S +E+DG +F+SGDVSH L
Sbjct: 428 AALVQLSNIYFSVQRNPEASKVRGMIEQRGVRKTPGWSVLEVDGNVTKFVSGDVSHPNLL 487
Query: 1589 EIHAVLYLMSLE 1624
+IH V++L+S++
Sbjct: 488 QIHTVIHLLSVD 499
>ref|XP_006290938.1| hypothetical protein CARUB_v10017051mg [Capsella rubella]
gi|482559645|gb|EOA23836.1| hypothetical protein
CARUB_v10017051mg [Capsella rubella]
Length = 507
Score = 521 bits (1343), Expect = e-145
Identities = 254/495 (51%), Positives = 348/495 (70%), Gaps = 8/495 (1%)
Frame = +2
Query: 164 KAWRWCMSLAQRCINMGQLKTIHAIFIAHGIHRNSYAVGKLIS-FCTLSE-NGDISYGSF 337
++W+ + +QRC + Q+K+ HA+FI HG+HRN+YA+ KL++ F L N Y S
Sbjct: 9 QSWKTLILASQRCNTVKQIKSTHALFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYAST 68
Query: 338 LFSQLPNPNSFVYNNLIRAYSRSPQPQLAVNYFNLMLNSR------LRPDGYTFPFVFMA 499
+F + N+FVY+ +IR SRS PQL + YF LM++ + P TF F+ +A
Sbjct: 69 IFDSIEIRNTFVYDTMIRICSRSSLPQLGLRYFRLMVSEDEKEEEDIAPSYLTFHFLIVA 128
Query: 500 CANGFLWSEGRQLHTWVIKNGIFESNAHVQSALVRFYAEHKVLDDARKVFDEITNVDAIQ 679
C L+S G+Q+H WV+KNG+F S+ HVQ+ ++R Y E +VL DARKVFDEI D ++
Sbjct: 129 CLKACLFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDRVLVDARKVFDEIPQPDVVK 188
Query: 680 CNILINGYVKCGMALEAQDVFRNMLVRGIEPDEFCLTTALTACAQLGDLDQGKWIHEYVK 859
++L+NGYV+CG+ E +VFR MLVRGIEPDEF +TTALTACAQ+G L QGKWIHE+VK
Sbjct: 189 WDVLMNGYVRCGLGSEGLEVFREMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVK 248
Query: 860 NRKNLRVADEFLGTALVDMYAKCGYIDTAEEVFSRMPKRNKFSWAAIIGGYAVHGCANQA 1039
+K ++ +D F+GTALVDMYAKCG I+TA EVF ++ +RN FSWAA+IGGYA +G A +A
Sbjct: 249 KKKWVK-SDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAREA 307
Query: 1040 FQCLERMQAEDGIMPDGIAVLGVLAACKHAGLVKQGQFLLENMESLYGLVPEHEHYSCVV 1219
CL+RM+ ED I PD + +LGVLAAC H G +++G+ +L+NMES YG+ P+HEHYSC+V
Sbjct: 308 IMCLDRMEREDAIKPDSVVLLGVLAACAHGGFLQEGRSMLDNMESRYGITPKHEHYSCIV 367
Query: 1220 DLLCRAGQLGEAVELIRRMPMKPLASVWGALLSGCRSHNNVIFXXXXXXXXXXXXXXXXX 1399
DL+CRAG+L A++LI +MPMKPLASVWGALL+GCR+H NV
Sbjct: 368 DLMCRAGRLDGALDLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVKNLLELEKGNVD 427
Query: 1400 XXXXAYVQLSNIYLGARQYDDARRIRRMIGEKGLKKTPGYSAVEIDGLFHEFISGDVSHS 1579
A VQLSNIY ++ +A +IR MI +KG+KK PG S +E+DG F+SGD+SH
Sbjct: 428 EEEAALVQLSNIYFSVQRNPEASKIRGMIDQKGIKKAPGCSVLEVDGDVTRFVSGDLSHP 487
Query: 1580 RLGEIHAVLYLMSLE 1624
L +IH V++L+S++
Sbjct: 488 NLLQIHTVIHLLSVD 502
>gb|EOY03349.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
[Theobroma cacao]
Length = 499
Score = 516 bits (1328), Expect = e-143
Identities = 252/485 (51%), Positives = 331/485 (68%), Gaps = 1/485 (0%)
Frame = +2
Query: 164 KAWRWCMSLAQRCINMGQLKTIHAIFIAHGIHRNSYAVGKLISFCTLSENGDISYGSFLF 343
+ W C++L QRC Q++ IHA+ I G+HRN + KLISF + S ++ Y S LF
Sbjct: 10 QCWTRCLTLLQRCTKASQIEPIHALLITQGLHRNPCIISKLISFLS-SPPTNLHYSSLLF 68
Query: 344 SQLPNPNSFVYNNLIRAYSRSPQPQLAVNYFNLMLNSR-LRPDGYTFPFVFMACANGFLW 520
+QL F+YN LI+A+S SP PQ + +YFN +L +RP+ T F+ ++CA
Sbjct: 69 NQLHKSTLFIYNTLIKAHSNSPHPQTSFHYFNHLLEEETIRPNCQTLNFILVSCAKTCSL 128
Query: 521 SEGRQLHTWVIKNGIFESNAHVQSALVRFYAEHKVLDDARKVFDEITNVDAIQCNILING 700
G+Q+ WV KNG+F S+++VQ+ ++R Y E ++ DARKVFDEI VD ++ N+L++G
Sbjct: 129 RSGKQIQNWVFKNGMFSSDSYVQTGVIRLYVEARLWVDARKVFDEIAYVDVVKWNVLMSG 188
Query: 701 YVKCGMALEAQDVFRNMLVRGIEPDEFCLTTALTACAQLGDLDQGKWIHEYVKNRKNLRV 880
+C + +A VF+ +LV GI+PDEFCLTTALTACAQ G L +GKWIHEY++ R+
Sbjct: 189 LARCRLGTQALSVFKELLVFGIQPDEFCLTTALTACAQNGSLREGKWIHEYLRKREKCLE 248
Query: 881 ADEFLGTALVDMYAKCGYIDTAEEVFSRMPKRNKFSWAAIIGGYAVHGCANQAFQCLERM 1060
D F+GTALVDMYAKCG +D A EVF M KRN +SWAA+IGG+AVHG A +A C ERM
Sbjct: 249 LDVFIGTALVDMYAKCGCLDLAVEVFEGMSKRNVYSWAAMIGGFAVHGHARKAIHCFERM 308
Query: 1061 QAEDGIMPDGIAVLGVLAACKHAGLVKQGQFLLENMESLYGLVPEHEHYSCVVDLLCRAG 1240
Q DGI PDG+ +LGVL AC HAGL ++G FLL NME Y +VP+HEHYSCVVDLLCR G
Sbjct: 309 Q-NDGIRPDGVVLLGVLTACTHAGLAEEGLFLLNNMEGQYRIVPKHEHYSCVVDLLCRTG 367
Query: 1241 QLGEAVELIRRMPMKPLASVWGALLSGCRSHNNVIFXXXXXXXXXXXXXXXXXXXXXAYV 1420
+ EA++LIRRMPM+PLASVWGALL+ CR +NNV A V
Sbjct: 368 KFDEALKLIRRMPMRPLASVWGALLNSCRIYNNVQLAELAVKELLELEDCDGDEEDAALV 427
Query: 1421 QLSNIYLGARQYDDARRIRRMIGEKGLKKTPGYSAVEIDGLFHEFISGDVSHSRLGEIHA 1600
QLSNIY A++ +D RIRRMIG++GLKK PG S +E+DG EF+SGD+SH +IH
Sbjct: 428 QLSNIYFSAQKSEDGHRIRRMIGDRGLKKAPGCSMIEVDGRMTEFVSGDISHPLHSQIHT 487
Query: 1601 VLYLM 1615
+L L+
Sbjct: 488 ILRLL 492
>ref|XP_006395353.1| hypothetical protein EUTSA_v10005682mg [Eutrema salsugineum]
gi|557091992|gb|ESQ32639.1| hypothetical protein
EUTSA_v10005682mg [Eutrema salsugineum]
Length = 505
Score = 513 bits (1321), Expect = e-142
Identities = 254/493 (51%), Positives = 342/493 (69%), Gaps = 6/493 (1%)
Frame = +2
Query: 164 KAWRWCMSLAQRCINMGQLKTIHAIFIAHGIHRNSYAVGKLISFCTLSENGD--ISYGSF 337
++WR + +QRC + Q+K+ HA+FI HGIHRN+YA+ KL++ N D Y S
Sbjct: 9 QSWRSLILASQRCTTLRQIKSTHALFIIHGIHRNTYAISKLLTAFLPLPNLDKHFHYASI 68
Query: 338 LFSQLPNPNSFVYNNLIRAYSRSPQPQLAVNYFNLMLNSR----LRPDGYTFPFVFMACA 505
+F + NSFVY+ +IR SRS +P L V YF LML + P TF F+ +A
Sbjct: 69 IFDSIELRNSFVYDTMIRICSRSSRPHLGVRYFRLMLTEDDEEDIAPSYLTFHFLLVAFL 128
Query: 506 NGFLWSEGRQLHTWVIKNGIFESNAHVQSALVRFYAEHKVLDDARKVFDEITNVDAIQCN 685
N L+S G+Q+H WVIKNG+ S+ HVQ+ ++R Y E KVL DARKVFDEI + D ++ +
Sbjct: 129 NASLFSVGKQIHCWVIKNGVLSSDGHVQTGIIRLYIEGKVLPDARKVFDEIPHPDVVKWD 188
Query: 686 ILINGYVKCGMALEAQDVFRNMLVRGIEPDEFCLTTALTACAQLGDLDQGKWIHEYVKNR 865
+L+NGYV+CG+ E VFR ML RG EPD+F +TTALTACAQ+G L QGK IH+ +K +
Sbjct: 189 VLMNGYVRCGLGSEGLHVFREMLARGTEPDKFSVTTALTACAQVGALAQGKLIHKLLKKK 248
Query: 866 KNLRVADEFLGTALVDMYAKCGYIDTAEEVFSRMPKRNKFSWAAIIGGYAVHGCANQAFQ 1045
K L +D ++GTALVDMYAKCG I+TA EVF + +RN FSWA +IGGYA +G A +A
Sbjct: 249 KLLE-SDIYVGTALVDMYAKCGCIETALEVFENLSRRNVFSWAVLIGGYAAYGYAKKAIM 307
Query: 1046 CLERMQAEDGIMPDGIAVLGVLAACKHAGLVKQGQFLLENMESLYGLVPEHEHYSCVVDL 1225
CL++M+ EDGI PD + +L VLAAC H G +++G+ LL+NME+ YG+ P+HEHYSC+VDL
Sbjct: 308 CLDQMEREDGIKPDSVVLLTVLAACAHGGFLQEGRALLDNMEARYGITPKHEHYSCIVDL 367
Query: 1226 LCRAGQLGEAVELIRRMPMKPLASVWGALLSGCRSHNNVIFXXXXXXXXXXXXXXXXXXX 1405
+CRAG+L +AV+LI MPMKPLASVWGALL+GCR+H NV
Sbjct: 368 ICRAGRLDDAVDLIEGMPMKPLASVWGALLNGCRTHKNVELGELAVKNLLDLEKGNADEE 427
Query: 1406 XXAYVQLSNIYLGARQYDDARRIRRMIGEKGLKKTPGYSAVEIDGLFHEFISGDVSHSRL 1585
A VQLSNIYL A++ +A IRRMIG+KG++K PG S +E+DG +F+SGDVSH L
Sbjct: 428 EAALVQLSNIYLIAQRNTEASNIRRMIGQKGIRKAPGCSVLEVDGNVTKFVSGDVSHQNL 487
Query: 1586 GEIHAVLYLMSLE 1624
+IH +++L+S++
Sbjct: 488 LQIHTMIHLLSVD 500
>gb|EXB36666.1| hypothetical protein L484_002079 [Morus notabilis]
Length = 487
Score = 509 bits (1311), Expect = e-141
Identities = 266/489 (54%), Positives = 331/489 (67%), Gaps = 2/489 (0%)
Frame = +2
Query: 158 SIKAWRW--CMSLAQRCINMGQLKTIHAIFIAHGIHRNSYAVGKLISFCTLSENGDISYG 331
SI++W W +SLAQRC NM QLK IHA+FI G+H N+YA+ KLI+FC LS++GD+ +
Sbjct: 7 SIQSWNWKRFISLAQRCANMRQLKPIHALFITTGLHLNNYAISKLIAFCALSDSGDLRHA 66
Query: 332 SFLFSQLPNPNSFVYNNLIRAYSRSPQPQLAVNYFNLMLNSRLRPDGYTFPFVFMACANG 511
S +F+Q+ PNSF+YN LIRAYSRS QP LA+ YF + ++ D TF FV +AC NG
Sbjct: 67 SLMFNQIQTPNSFIYNTLIRAYSRSSQPHLALRYFQPTVKDKVA-DNLTFSFVLLACVNG 125
Query: 512 FLWSEGRQLHTWVIKNGIFESNAHVQSALVRFYAEHKVLDDARKVFDEITNVDAIQCNIL 691
L EG Q+H + G ES VR + D Q N L
Sbjct: 126 GLVLEGTQVHCY---GGCKES--------VRGHR------------------DLFQWNAL 156
Query: 692 INGYVKCGMALEAQDVFRNMLVRGIEPDEFCLTTALTACAQLGDLDQGKWIHEYVKNRKN 871
++GY++C +A EA VFR+ML G+E DE C TALTACAQ G L GKWIHEY++ R+
Sbjct: 157 MDGYIRCSLASEALGVFRDMLKFGVELDECCAVTALTACAQSGALWWGKWIHEYIEKREG 216
Query: 872 LRVADEFLGTALVDMYAKCGYIDTAEEVFSRMPKRNKFSWAAIIGGYAVHGCANQAFQCL 1051
+D F+GTALVDMY KCG +D A EVF +MP RN FSWAAIIGG+AVHG +A +CL
Sbjct: 217 FE-SDVFVGTALVDMYTKCGCLDMAVEVFEKMPTRNAFSWAAIIGGFAVHGQVMEAIRCL 275
Query: 1052 ERMQAEDGIMPDGIAVLGVLAACKHAGLVKQGQFLLENMESLYGLVPEHEHYSCVVDLLC 1231
ERMQA+DG+ PDG+ +LGVL AC HAGL K+GQ LL NMES YG++P+HEHYSCVVDLLC
Sbjct: 276 ERMQADDGLKPDGVVLLGVLTACTHAGLQKEGQLLLHNMESQYGILPKHEHYSCVVDLLC 335
Query: 1232 RAGQLGEAVELIRRMPMKPLASVWGALLSGCRSHNNVIFXXXXXXXXXXXXXXXXXXXXX 1411
RAG+L EA +LIRRMPMKPLASVWGALLSGCR N V
Sbjct: 336 RAGKLREAYQLIRRMPMKPLASVWGALLSGCRIRNYVDLAELAVKELVLLENEDKRGQDG 395
Query: 1412 AYVQLSNIYLGARQYDDARRIRRMIGEKGLKKTPGYSAVEIDGLFHEFISGDVSHSRLGE 1591
YVQLSNIYL A++ +DA IR+MIG+KG++KTPG S VE+DG +EF+SGD+ HS +
Sbjct: 396 VYVQLSNIYLAAQRTEDAVLIRKMIGDKGIRKTPGCSTVEVDGRVNEFVSGDIVHSCQAK 455
Query: 1592 IHAVLYLMS 1618
I +LYL+S
Sbjct: 456 ICVMLYLLS 464
>ref|XP_002877120.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297322958|gb|EFH53379.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 399
Score = 447 bits (1150), Expect = e-123
Identities = 209/389 (53%), Positives = 286/389 (73%)
Frame = +2
Query: 458 LRPDGYTFPFVFMACANGFLWSEGRQLHTWVIKNGIFESNAHVQSALVRFYAEHKVLDDA 637
+ P TF F+ +AC L+S G+Q+H WV+KNG+F S+ HVQ+ ++R Y E KVL DA
Sbjct: 7 IAPSYLTFYFLIVACFKACLFSVGKQIHCWVVKNGVFLSDGHVQTGILRIYVEDKVLLDA 66
Query: 638 RKVFDEITNVDAIQCNILINGYVKCGMALEAQDVFRNMLVRGIEPDEFCLTTALTACAQL 817
KVFDEI D ++ ++L+NGYV+CG+ E +VFR MLVRG+EPDEF +TTALTACAQ+
Sbjct: 67 HKVFDEIPKPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVRGVEPDEFSVTTALTACAQV 126
Query: 818 GDLDQGKWIHEYVKNRKNLRVADEFLGTALVDMYAKCGYIDTAEEVFSRMPKRNKFSWAA 997
G L QGKWIHE+VK ++ + +D F+GTALVDMYAKCG I+ A EVF ++ +RN FSWAA
Sbjct: 127 GALAQGKWIHEFVKKKRWIE-SDVFVGTALVDMYAKCGCIEMAVEVFEKLSRRNVFSWAA 185
Query: 998 IIGGYAVHGCANQAFQCLERMQAEDGIMPDGIAVLGVLAACKHAGLVKQGQFLLENMESL 1177
+IGGYA +G A +A CL+RM+ EDGI PD + +LGVLAAC H G +++G+ +L NME+
Sbjct: 186 LIGGYAAYGYAKKAMTCLDRMEREDGIKPDSVVLLGVLAACAHGGFLQEGRAMLGNMEAR 245
Query: 1178 YGLVPEHEHYSCVVDLLCRAGQLGEAVELIRRMPMKPLASVWGALLSGCRSHNNVIFXXX 1357
YG+ P+HEHYSC+VDL+CRAG+L +A++LI +MPMKPLASVWGALL+GCR+H NV
Sbjct: 246 YGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVELGEL 305
Query: 1358 XXXXXXXXXXXXXXXXXXAYVQLSNIYLGARQYDDARRIRRMIGEKGLKKTPGYSAVEID 1537
A VQLSNIY ++ +A ++R MI ++G++KTPG+S +E+D
Sbjct: 306 AVKNLLDLEKGNAEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGIRKTPGWSVLEVD 365
Query: 1538 GLFHEFISGDVSHSRLGEIHAVLYLMSLE 1624
G +F+SGDVSH L +IH V++L+S++
Sbjct: 366 GNVTKFVSGDVSHPNLLQIHTVIHLLSVD 394
Score = 91.3 bits (225), Expect = 1e-15
Identities = 63/230 (27%), Positives = 109/230 (47%), Gaps = 2/230 (0%)
Frame = +2
Query: 338 LFSQLPNPNSFVYNNLIRAYSRSPQPQLAVNYFNLMLNSRLRPDGYTFPFVFMACANGFL 517
+F ++P P+ ++ L+ Y R + F ML + PD ++ ACA
Sbjct: 69 VFDEIPKPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVRGVEPDEFSVTTALTACAQVGA 128
Query: 518 WSEGRQLHTWVIKNGIFESNAHVQSALVRFYAEHKVLDDARKVFDEITNVDAIQCNILIN 697
++G+ +H +V K ES+ V +ALV YA+ ++ A +VF++++ + LI
Sbjct: 129 LAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIEMAVEVFEKLSRRNVFSWAALIG 188
Query: 698 GYVKCGMALEAQDVFRNM-LVRGIEPDEFCLTTALTACAQLGDLDQGKWIHEYVKNRKNL 874
GY G A +A M GI+PD L L ACA G L +G+ + ++ R +
Sbjct: 189 GYAAYGYAKKAMTCLDRMEREDGIKPDSVVLLGVLAACAHGGFLQEGRAMLGNMEARYGI 248
Query: 875 RVADEFLGTALVDMYAKCGYIDTAEEVFSRMPKRNKFS-WAAIIGGYAVH 1021
E + +VD+ + G +D A ++ +MP + S W A++ G H
Sbjct: 249 TPKHEHY-SCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTH 297
>ref|XP_002517451.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223543462|gb|EEF44993.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 428
Score = 410 bits (1053), Expect = e-111
Identities = 198/347 (57%), Positives = 256/347 (73%)
Frame = +2
Query: 575 NAHVQSALVRFYAEHKVLDDARKVFDEITNVDAIQCNILINGYVKCGMALEAQDVFRNML 754
+ H+Q+A+VR YA+ K++ DA K+FDEI D IQ N+L+NGY++ + EA VFR M
Sbjct: 63 DGHIQTAVVRLYAKCKIMSDAHKMFDEIHRPDVIQWNVLMNGYIESNLESEALRVFRFMF 122
Query: 755 VRGIEPDEFCLTTALTACAQLGDLDQGKWIHEYVKNRKNLRVADEFLGTALVDMYAKCGY 934
V+G+EPDEFC+TTAL ACA+ G L QGKWIHEYVK K D F+GTALVDMYAKCG+
Sbjct: 123 VKGVEPDEFCVTTALAACAKSGALWQGKWIHEYVK--KTTLGFDVFIGTALVDMYAKCGW 180
Query: 935 IDTAEEVFSRMPKRNKFSWAAIIGGYAVHGCANQAFQCLERMQAEDGIMPDGIAVLGVLA 1114
I+ A +VF MPKR+ FSWAA+IGGYA+HG A +A LERM AEDG+ PDG+ +LGVL
Sbjct: 181 INMAVQVFEEMPKRSAFSWAAMIGGYAIHGYAREAIHYLERMHAEDGLRPDGVVLLGVLT 240
Query: 1115 ACKHAGLVKQGQFLLENMESLYGLVPEHEHYSCVVDLLCRAGQLGEAVELIRRMPMKPLA 1294
AC HAGL ++G+FLL+NM++ YG+VP HEHYSCVVDLLCRAG+ EA+ LI+RMPMKPLA
Sbjct: 241 ACTHAGLQEEGRFLLDNMKARYGIVPRHEHYSCVVDLLCRAGRWDEALALIKRMPMKPLA 300
Query: 1295 SVWGALLSGCRSHNNVIFXXXXXXXXXXXXXXXXXXXXXAYVQLSNIYLGARQYDDARRI 1474
SVWGA+LS CR+H N A+VQL NIYL + +DA +I
Sbjct: 301 SVWGAVLSSCRTHKNAELAEFAVQELLQLENGNGNEEDAAFVQLWNIYLSTGRGEDASKI 360
Query: 1475 RRMIGEKGLKKTPGYSAVEIDGLFHEFISGDVSHSRLGEIHAVLYLM 1615
R+IGE+GLKKTPG S +E++G+ +EF+SGDVS+ + ++HA+L L+
Sbjct: 361 HRLIGERGLKKTPGCSMIEVNGMVNEFVSGDVSNKDVAQMHAILELL 407
Score = 149 bits (375), Expect = 6e-33
Identities = 106/325 (32%), Positives = 156/325 (48%), Gaps = 19/325 (5%)
Frame = +2
Query: 158 SIKAWRWCMSLAQRCINMGQLKTIHAIFIAHGIHRNSYAVGKLISFCTLSENGD------ 319
SIKAW+ CMSL Q+C NM QLK IHA FI +GIH N+YA+ KLI FC LS +
Sbjct: 11 SIKAWKHCMSLVQQCANMRQLKAIHATFIVNGIHTNTYAISKLIDFCALSPHDGHIQTAV 70
Query: 320 ---------ISYGSFLFSQLPNPNSFVYNNLIRAYSRSPQPQLAVNYFNLMLNSRLRPDG 472
+S +F ++ P+ +N L+ Y S A+ F M + PD
Sbjct: 71 VRLYAKCKIMSDAHKMFDEIHRPDVIQWNVLMNGYIESNLESEALRVFRFMFVKGVEPDE 130
Query: 473 YTFPFVFMACA-NGFLWSEGRQLHTWVIKNGIFESNAHVQSALVRFYAEHKVLDDARKVF 649
+ ACA +G LW +G+ +H +V K + + +ALV YA+ ++ A +VF
Sbjct: 131 FCVTTALAACAKSGALW-QGKWIHEYV-KKTTLGFDVFIGTALVDMYAKCGWINMAVQVF 188
Query: 650 DEITNVDAIQCNILINGYVKCGMALEAQDVFRNMLVR-GIEPDEFCLTTALTACAQLGDL 826
+E+ A +I GY G A EA M G+ PD L LTAC G
Sbjct: 189 EEMPKRSAFSWAAMIGGYAIHGYAREAIHYLERMHAEDGLRPDGVVLLGVLTACTHAGLQ 248
Query: 827 DQGKWIHEYVKNRKNLRVADEFLGTALVDMYAKCGYIDTAEEVFSRMPKRNKFS-WAAII 1003
++G+++ + +K R + E + +VD+ + G D A + RMP + S W A++
Sbjct: 249 EEGRFLLDNMKARYGIVPRHEHY-SCVVDLLCRAGRWDEALALIKRMPMKPLASVWGAVL 307
Query: 1004 GGYAVHGCANQA-FQCLERMQAEDG 1075
H A A F E +Q E+G
Sbjct: 308 SSCRTHKNAELAEFAVQELLQLENG 332
>ref|NP_001173276.1| Os03g0158900 [Oryza sativa Japonica Group] gi|22773237|gb|AAN06843.1|
Hypothetical protein [Oryza sativa Japonica Group]
gi|108706287|gb|ABF94082.1| pentatricopeptide, putative,
expressed [Oryza sativa Japonica Group]
gi|125584986|gb|EAZ25650.1| hypothetical protein
OsJ_09480 [Oryza sativa Japonica Group]
gi|255674223|dbj|BAH92004.1| Os03g0158900 [Oryza sativa
Japonica Group]
Length = 490
Score = 365 bits (937), Expect = 4e-98
Identities = 196/434 (45%), Positives = 267/434 (61%), Gaps = 7/434 (1%)
Frame = +2
Query: 338 LFSQLPNPNSFVYNNLIRAYSR---SP-QPQLAVNYFNLMLNSRLR---PDGYTFPFVFM 496
L + P+ + N+L+R SR SP P LA+ LML+ PD +FPF
Sbjct: 46 LLPRHPDLSLVALNSLLRVLSRRASSPAHPLLALRLLLLMLSPASPLPPPDHLSFPFALS 105
Query: 497 ACANGFLWSEGRQLHTWVIKNGIFESNAHVQSALVRFYAEHKVLDDARKVFDEITNVDAI 676
A A S G QLH ++KNG F S+ +V +AL++ DDAR+VFDE+ +AI
Sbjct: 106 AAAT-VSPSPGAQLHALLVKNGHFPSDHYVTTALLQLQLHAARPDDARRVFDELPRREAI 164
Query: 677 QCNILINGYVKCGMALEAQDVFRNMLVRGIEPDEFCLTTALTACAQLGDLDQGKWIHEYV 856
+++I Y + GMA E VFR M V G+ PD LTTA+ ACAQ G L+ G+W+H YV
Sbjct: 165 HYDLVIGAYTRTGMAGEGLGVFRAMFVDGVAPDAVVLTTAIAACAQAGALECGEWVHRYV 224
Query: 857 KNRKNLRVADEFLGTALVDMYAKCGYIDTAEEVFSRMPKRNKFSWAAIIGGYAVHGCANQ 1036
+ + D F+G+ALV MYAKCG ++ A VF MP+RN + W ++G +AVHG A +
Sbjct: 225 EASAPWLLGDAFVGSALVSMYAKCGCLEQAVRVFDGMPERNDYVWGTMVGAFAVHGMAEE 284
Query: 1037 AFQCLERMQAEDGIMPDGIAVLGVLAACKHAGLVKQGQFLLENMESLYGLVPEHEHYSCV 1216
A CL+RM EDG+ PDG+AVLG L+AC HAG V+ G LL+ M YG+ P HEHY+C
Sbjct: 285 AVSCLDRMAREDGVRPDGVAVLGALSACAHAGKVEDGLRLLKEMRRRYGVAPGHEHYACT 344
Query: 1217 VDLLCRAGQLGEAVELIRRMPMKPLASVWGALLSGCRSHNNVIFXXXXXXXXXXXXXXXX 1396
VD+LCR G+L +AV LI MPM PLASVWG++L+GCR++ NV
Sbjct: 345 VDMLCRVGRLEDAVALIETMPMAPLASVWGSVLTGCRTYANV-----ELAEVAAAELGKL 399
Query: 1397 XXXXXAYVQLSNIYLGARQYDDARRIRRMIGEKGLKKTPGYSAVEIDGLFHEFISGDVSH 1576
YVQLSNIYL + + DDARR+R++IG +G++K P YSAVE+DG+ F++ D +H
Sbjct: 400 GADEGVYVQLSNIYLDSNRKDDARRVRKLIGSRGIRKVPAYSAVEVDGVVRSFVADDQAH 459
Query: 1577 SRLGEIHAVLYLMS 1618
+ EI VL L++
Sbjct: 460 PQRVEIWEVLGLLA 473
>gb|EMT01880.1| hypothetical protein F775_14784 [Aegilops tauschii]
Length = 426
Score = 363 bits (931), Expect = 2e-97
Identities = 190/416 (45%), Positives = 260/416 (62%), Gaps = 1/416 (0%)
Frame = +2
Query: 464 PDGYTFPFVFMACANGFLWSE-GRQLHTWVIKNGIFESNAHVQSALVRFYAEHKVLDDAR 640
PD +FPF A A + G QLH ++KN +F S+ +V +AL++ +A DDAR
Sbjct: 11 PDHLSFPFALSAAAAAPVAPPPGPQLHALLVKNALFPSDHYVTTALLQLHAPRP--DDAR 68
Query: 641 KVFDEITNVDAIQCNILINGYVKCGMALEAQDVFRNMLVRGIEPDEFCLTTALTACAQLG 820
+VFDE+ +AI +++I Y + GMA E +FR M V G+ PD LTTA+ ACAQ G
Sbjct: 69 RVFDELPRREAIHYDLVIGAYARAGMAAEGLALFRAMFVDGVAPDAVVLTTAVAACAQSG 128
Query: 821 DLDQGKWIHEYVKNRKNLRVADEFLGTALVDMYAKCGYIDTAEEVFSRMPKRNKFSWAAI 1000
L+ G+W+H YV++ +AD F+G+ALV MYAKCG + A VF MP+RN++ W +
Sbjct: 129 ALECGEWVHRYVESNAPGLLADAFVGSALVSMYAKCGCLQEAVRVFEGMPERNEYVWGTM 188
Query: 1001 IGGYAVHGCANQAFQCLERMQAEDGIMPDGIAVLGVLAACKHAGLVKQGQFLLENMESLY 1180
+G +AVHG A +A CLERM EDG+ PDG+AVLG L+AC HAG V+ G LL+ M Y
Sbjct: 189 VGAFAVHGMAREAVACLERMAGEDGVRPDGVAVLGALSACAHAGKVEDGLRLLKEMRRRY 248
Query: 1181 GLVPEHEHYSCVVDLLCRAGQLGEAVELIRRMPMKPLASVWGALLSGCRSHNNVIFXXXX 1360
G+ P HEHYSC VD+LCR G+L +AV LI MPM PLASVWG+LL+GCR + NV
Sbjct: 249 GVTPGHEHYSCTVDMLCRVGRLEDAVGLIGTMPMTPLASVWGSLLAGCRMYGNV---KLA 305
Query: 1361 XXXXXXXXXXXXXXXXXAYVQLSNIYLGARQYDDARRIRRMIGEKGLKKTPGYSAVEIDG 1540
YVQLSNIYL A + DDARR+R++IG +GLKK P YSAVE+DG
Sbjct: 306 EVAAKELEKLGVGADEGVYVQLSNIYLDANRKDDARRVRKLIGSRGLKKVPAYSAVEVDG 365
Query: 1541 LFHEFISGDVSHSRLGEIHAVLYLMSLEVSIDQNK*RRHETSKSLLLSVNCIHKKK 1708
F++ D +H R EI +L L++ ++ + ++ E ++ C +K+K
Sbjct: 366 ELSSFVADDQAHPRRFEIWDLLGLLADQMGLKSDE--EDEEEETTFSLRPCSNKRK 419
Score = 79.0 bits (193), Expect = 7e-12
Identities = 67/256 (26%), Positives = 116/256 (45%), Gaps = 9/256 (3%)
Frame = +2
Query: 338 LFSQLPNPNSFVYNNLIRAYSRSPQPQLAVNYFNLMLNSRLRPDGYTFPFVFMACANGFL 517
+F +LP + Y+ +I AY+R+ + F M + PD ACA
Sbjct: 70 VFDELPRREAIHYDLVIGAYARAGMAAEGLALFRAMFVDGVAPDAVVLTTAVAACAQSGA 129
Query: 518 WSEGRQLHTWVIKN--GIFESNAHVQSALVRFYAEHKVLDDARKVFDEITNVDAIQCNIL 691
G +H +V N G+ ++A V SALV YA+ L +A +VF+ + + +
Sbjct: 130 LECGEWVHRYVESNAPGLL-ADAFVGSALVSMYAKCGCLQEAVRVFEGMPERNEYVWGTM 188
Query: 692 INGYVKCGMALEAQDVFRNMLVR-GIEPDEFCLTTALTACAQLGDLDQGKWIHEYVKNRK 868
+ + GMA EA M G+ PD + AL+ACA G ++ G + + ++ R
Sbjct: 189 VGAFAVHGMAREAVACLERMAGEDGVRPDGVAVLGALSACAHAGKVEDGLRLLKEMRRRY 248
Query: 869 NLRVADEFLGTALVDMYAKCGYIDTAEEVFSRMPKRNKFS-WAAIIGGYAVHG---CANQ 1036
+ E + VDM + G ++ A + MP S W +++ G ++G A
Sbjct: 249 GVTPGHEHY-SCTVDMLCRVGRLEDAVGLIGTMPMTPLASVWGSLLAGCRMYGNVKLAEV 307
Query: 1037 AFQCLERM--QAEDGI 1078
A + LE++ A++G+
Sbjct: 308 AAKELEKLGVGADEGV 323
>ref|XP_006650550.1| PREDICTED: pentatricopeptide repeat-containing protein At3g28660-like
[Oryza brachyantha]
Length = 493
Score = 362 bits (928), Expect = 4e-97
Identities = 196/434 (45%), Positives = 265/434 (61%), Gaps = 7/434 (1%)
Frame = +2
Query: 338 LFSQLPNPNSFVYNNLIRAYSR---SP-QPQLAVNYFNLMLNSRL---RPDGYTFPFVFM 496
L + P+ + N+L+R SR SP P LA+ ML+ PD +FPF
Sbjct: 50 LLPRHPDLSLVALNSLLRVLSRRAASPAHPMLALRLLVRMLSPGSPLPSPDHLSFPFALS 109
Query: 497 ACANGFLWSEGRQLHTWVIKNGIFESNAHVQSALVRFYAEHKVLDDARKVFDEITNVDAI 676
A A G G QLH V++NG+F S+ +V +AL++ +A DDAR+VFDE+ +AI
Sbjct: 110 AAA-GAAPPPGDQLHALVVRNGLFPSDHYVTTALLQLHAPRP--DDARRVFDELPRREAI 166
Query: 677 QCNILINGYVKCGMALEAQDVFRNMLVRGIEPDEFCLTTALTACAQLGDLDQGKWIHEYV 856
+++I Y + GMA E FR M G+ PD LTTA+ ACAQ G L+ G+W+H YV
Sbjct: 167 HYDLVIGAYARAGMAAEGLGGFRAMFADGVLPDAVVLTTAIAACAQAGALECGEWMHRYV 226
Query: 857 KNRKNLRVADEFLGTALVDMYAKCGYIDTAEEVFSRMPKRNKFSWAAIIGGYAVHGCANQ 1036
+ + D F+G+ALV MYAKCG ++ A VF MP+RN + W ++G +AVHG A +
Sbjct: 227 ERTAPGLLGDAFVGSALVSMYAKCGCLEQAVRVFDGMPERNDYVWGTMVGAFAVHGMAEE 286
Query: 1037 AFQCLERMQAEDGIMPDGIAVLGVLAACKHAGLVKQGQFLLENMESLYGLVPEHEHYSCV 1216
A CL+RM EDG+ PDG+AVLG L+AC HAG V+ G LL+ M YG+ P HEHYSC
Sbjct: 287 AVACLDRMAREDGVRPDGVAVLGALSACAHAGKVEDGLRLLKEMRRRYGVAPGHEHYSCT 346
Query: 1217 VDLLCRAGQLGEAVELIRRMPMKPLASVWGALLSGCRSHNNVIFXXXXXXXXXXXXXXXX 1396
VD+LCR G+L +AV LI+ MPM PL SVWG++L+GCR + NV
Sbjct: 347 VDMLCRVGRLEDAVALIKTMPMAPLTSVWGSVLTGCRIYANV---ELAEVAAGELAKLGA 403
Query: 1397 XXXXXAYVQLSNIYLGARQYDDARRIRRMIGEKGLKKTPGYSAVEIDGLFHEFISGDVSH 1576
YVQLSNIYL A + DDARR+R++IG +G++K P YSAVE+DG F++ D +H
Sbjct: 404 GADEGVYVQLSNIYLDANRKDDARRVRKLIGSRGIRKVPAYSAVEVDGEVSSFVADDQAH 463
Query: 1577 SRLGEIHAVLYLMS 1618
+ EI VL L+S
Sbjct: 464 PQRVEIWGVLGLLS 477
>gb|EMS68422.1| hypothetical protein TRIUR3_23855 [Triticum urartu]
Length = 425
Score = 361 bits (927), Expect = 6e-97
Identities = 189/405 (46%), Positives = 255/405 (62%), Gaps = 1/405 (0%)
Frame = +2
Query: 464 PDGYTFPFVFMACANGFLWSE-GRQLHTWVIKNGIFESNAHVQSALVRFYAEHKVLDDAR 640
PD +FPF A A + G QLH ++KN +F S+ +V +AL++ +A DDAR
Sbjct: 11 PDHLSFPFALSAAAVAPVAPPPGPQLHALLLKNALFPSDHYVTTALLQLHAPRP--DDAR 68
Query: 641 KVFDEITNVDAIQCNILINGYVKCGMALEAQDVFRNMLVRGIEPDEFCLTTALTACAQLG 820
+VFDE+ +AI +++I Y + GMA E +FR M G+ PD LTTA+ ACAQ G
Sbjct: 69 RVFDELPRREAIHYDLVIGAYARAGMAAEGLALFRAMFADGVAPDAVVLTTAIAACAQSG 128
Query: 821 DLDQGKWIHEYVKNRKNLRVADEFLGTALVDMYAKCGYIDTAEEVFSRMPKRNKFSWAAI 1000
L+ G+W+H YV++ +AD F+G+ALV MYAKCG + A VF MP+RN++ W +
Sbjct: 129 ALECGEWVHRYVESNAPGLLADAFVGSALVSMYAKCGCLQEAVRVFEGMPERNEYVWGTM 188
Query: 1001 IGGYAVHGCANQAFQCLERMQAEDGIMPDGIAVLGVLAACKHAGLVKQGQFLLENMESLY 1180
+G +AVHG A +A CLERM EDG+ PDG+AVLG L+AC HAG V+ G LL+ M Y
Sbjct: 189 VGAFAVHGMAREAVACLERMAGEDGVRPDGVAVLGALSACAHAGKVEDGLRLLKEMRRRY 248
Query: 1181 GLVPEHEHYSCVVDLLCRAGQLGEAVELIRRMPMKPLASVWGALLSGCRSHNNVIFXXXX 1360
G+ P HEH+SC VD+LCR G+L +AV LI MPM PLASVWG+LL+GCR + NV
Sbjct: 249 GVTPGHEHFSCTVDMLCRVGRLEDAVGLIGTMPMTPLASVWGSLLAGCRMYGNV---ELA 305
Query: 1361 XXXXXXXXXXXXXXXXXAYVQLSNIYLGARQYDDARRIRRMIGEKGLKKTPGYSAVEIDG 1540
YVQLSNIYL A + DDARR+R++IG +GLKK P YSAVEIDG
Sbjct: 306 EVAAKELEKLGMGADEGVYVQLSNIYLDANRKDDARRVRKLIGNRGLKKVPAYSAVEIDG 365
Query: 1541 LFHEFISGDVSHSRLGEIHAVLYLMSLEVSIDQNK*RRHETSKSL 1675
F++ D +H R EI +L L++ ++ ++ ET+ SL
Sbjct: 366 ELSSFVADDQAHPRRFEIWDLLGLLADQMGRKPDEEEEEETTFSL 410
Score = 81.3 bits (199), Expect = 2e-12
Identities = 68/256 (26%), Positives = 116/256 (45%), Gaps = 9/256 (3%)
Frame = +2
Query: 338 LFSQLPNPNSFVYNNLIRAYSRSPQPQLAVNYFNLMLNSRLRPDGYTFPFVFMACANGFL 517
+F +LP + Y+ +I AY+R+ + F M + PD ACA
Sbjct: 70 VFDELPRREAIHYDLVIGAYARAGMAAEGLALFRAMFADGVAPDAVVLTTAIAACAQSGA 129
Query: 518 WSEGRQLHTWVIKN--GIFESNAHVQSALVRFYAEHKVLDDARKVFDEITNVDAIQCNIL 691
G +H +V N G+ ++A V SALV YA+ L +A +VF+ + + +
Sbjct: 130 LECGEWVHRYVESNAPGLL-ADAFVGSALVSMYAKCGCLQEAVRVFEGMPERNEYVWGTM 188
Query: 692 INGYVKCGMALEAQDVFRNMLVR-GIEPDEFCLTTALTACAQLGDLDQGKWIHEYVKNRK 868
+ + GMA EA M G+ PD + AL+ACA G ++ G + + ++ R
Sbjct: 189 VGAFAVHGMAREAVACLERMAGEDGVRPDGVAVLGALSACAHAGKVEDGLRLLKEMRRRY 248
Query: 869 NLRVADEFLGTALVDMYAKCGYIDTAEEVFSRMPKRNKFS-WAAIIGGYAVHG---CANQ 1036
+ E + VDM + G ++ A + MP S W +++ G ++G A
Sbjct: 249 GVTPGHEHF-SCTVDMLCRVGRLEDAVGLIGTMPMTPLASVWGSLLAGCRMYGNVELAEV 307
Query: 1037 AFQCLER--MQAEDGI 1078
A + LE+ M A++G+
Sbjct: 308 AAKELEKLGMGADEGV 323
>ref|XP_002439151.1| hypothetical protein SORBIDRAFT_09g001360 [Sorghum bicolor]
gi|190688727|gb|ACE86390.1| pentatricopeptide (PPR)
repeat-containing protein [Sorghum bicolor]
gi|241944436|gb|EES17581.1| hypothetical protein
SORBIDRAFT_09g001360 [Sorghum bicolor]
Length = 517
Score = 359 bits (922), Expect = 2e-96
Identities = 201/473 (42%), Positives = 274/473 (57%), Gaps = 21/473 (4%)
Frame = +2
Query: 338 LFSQLPNPNSFVYNNLIRAYSRSP----QPQLAVNYFNLMLNSRLR-------PDGYTFP 484
L + P+ N+L+ + SR P LA+ LML+ PD +FP
Sbjct: 44 LLPRHPDLALLALNSLLHSLSRRAACPAHPHLALRLLRLMLSPTTTTPPALPAPDHLSFP 103
Query: 485 FVFMACA-------NGFLWSEGRQLHTWVIKNGIFESNAHVQSALVRFYAEHKVLDDARK 643
F A A + +S G QLH +++N +F ++ +V +AL++ Y+ H D AR+
Sbjct: 104 FALSAAAALDATTPSSSSYSTGPQLHALLVRNALFPADHYVTTALLQLYSPHP--DLARR 161
Query: 644 VFDEITNVDAIQCNILINGYVKCGMALEAQDVFRNMLVRG---IEPDEFCLTTALTACAQ 814
VFDE+ +AI ++LI Y + G E VFR M + PD LTTA+ ACAQ
Sbjct: 162 VFDELPRREAIHYDLLIGSYARAGAPTEGLAVFRAMFDDDDGVVVPDAVVLTTAVAACAQ 221
Query: 815 LGDLDQGKWIHEYVKNRKNLRVADEFLGTALVDMYAKCGYIDTAEEVFSRMPKRNKFSWA 994
G LD G W+H YV+ +AD FLG+ALV MYAKCG +D A VF MP+RN + W
Sbjct: 222 AGALDHGAWVHRYVERTAPGLLADAFLGSALVGMYAKCGCLDDAVRVFDGMPERNAYVWG 281
Query: 995 AIIGGYAVHGCANQAFQCLERMQAEDGIMPDGIAVLGVLAACKHAGLVKQGQFLLENMES 1174
++G AVHG A +A CL+RM EDG+ PDG+AVLG L+AC HAG V++G LL M
Sbjct: 282 TMVGALAVHGMAAEAVACLDRMAVEDGVRPDGVAVLGALSACAHAGNVEEGLCLLREMRP 341
Query: 1175 LYGLVPEHEHYSCVVDLLCRAGQLGEAVELIRRMPMKPLASVWGALLSGCRSHNNVIFXX 1354
YG+VP HEHYSC VD+LCR G+L +AV L+ MPM PLASVWG++L+GCRS+ NV
Sbjct: 342 RYGVVPGHEHYSCAVDMLCRVGRLEDAVGLVETMPMAPLASVWGSVLAGCRSYGNV---E 398
Query: 1355 XXXXXXXXXXXXXXXXXXXAYVQLSNIYLGARQYDDARRIRRMIGEKGLKKTPGYSAVEI 1534
YVQLSNIYL A + DDARR+R++IG +G+KK P YSAVE+
Sbjct: 399 LAEVAVRELEKLGGTADEGVYVQLSNIYLDANRKDDARRVRKLIGSRGIKKVPAYSAVEV 458
Query: 1535 DGLFHEFISGDVSHSRLGEIHAVLYLMSLEVSIDQNK*RRHETSKSLLLSVNC 1693
DG F++ D +H R EI VL L++ ++ + K + E L+ ++ C
Sbjct: 459 DGEVSSFVADDQAHPRRFEIWEVLRLLADQM---RQKPKEEEEFVELICNIAC 508
>ref|XP_004981863.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g28640-like [Setaria italica]
Length = 495
Score = 358 bits (920), Expect = 4e-96
Identities = 204/462 (44%), Positives = 270/462 (58%), Gaps = 15/462 (3%)
Frame = +2
Query: 338 LFSQLPNPNSFVYNNLIRAYSR---SP-QPQLAVNYFNLMLNSRL---RPDGYTFPFVFM 496
L + P+ + N+L+ A SR SP P+LA+ ML+ PD +FPF
Sbjct: 44 LLPRHPDLSLLALNSLLHALSRRAASPAHPRLALGLLRDMLSPATPLPAPDHLSFPFALS 103
Query: 497 ACA------NGFLWSEGRQLHTWVIKNGIFESNAHVQSALVRFYAEHKVLDDARKVFDEI 658
A A + G QLH +++N +F + +V +AL++ YA L AR+VFDE+
Sbjct: 104 AAAAVDAPDSSSDAGAGAQLHALLVRNALFPVDHYVTTALLQLYAPRPEL--ARRVFDEL 161
Query: 659 TNVDAIQCNILINGYVKCGMALEAQDVFRNMLVRGIEPDEFCLTTALTACAQLGDLDQGK 838
+AI +++I Y + GM E VFR M G+ PD LTTA+ ACAQ G LD G
Sbjct: 162 PRREAIHYDLVIGAYARAGMPAEGLAVFRAMFEDGVAPDAVVLTTAVAACAQAGALDCGA 221
Query: 839 WIHEYVKNRKNLRVADEFLGTALVDMYAKCGYIDTAEEVFSRMPKRNKFSWAAIIGGYAV 1018
W+H YV+ + D F+G+ALV MYAKCG +D A VF MP+RN++ W ++G +AV
Sbjct: 222 WVHRYVERAAPGLLGDAFVGSALVSMYAKCGCLDEAVRVFDGMPERNEYVWGTMVGAFAV 281
Query: 1019 HGCANQAFQCLERMQAEDGIMPDGIAVLGVLAACKHAGLVKQGQFLLENMESLYGLVPEH 1198
HG A +A CLERM EDG+ PDG+AVLG L+AC HAG V G LL M YG+ P H
Sbjct: 282 HGMAAEAVACLERMAREDGVRPDGVAVLGALSACAHAGKVDDGLRLLREMRGRYGVAPGH 341
Query: 1199 EHYSCVVDLLCRAGQLGEAVELIRRMPMKPLASVWGALLSGCRSHNNVIFXXXXXXXXXX 1378
EHYSC VD+LCR G+L +AV LI MPM PL SVWG++L+GCRS+ NV
Sbjct: 342 EHYSCTVDMLCRVGRLEDAVGLIGTMPMAPLESVWGSVLAGCRSYGNV---ELAEVAARE 398
Query: 1379 XXXXXXXXXXXAYVQLSNIYLGARQYDDARRIRRMIGEKGLKKTPGYSAVEIDGLFHEFI 1558
YVQLSNIYL A + DDARR+R++IG +G+KK P YSAVE+DG F+
Sbjct: 399 LEKLGGTADEGVYVQLSNIYLDANRKDDARRVRKLIGSRGIKKAPAYSAVEVDGEVSSFV 458
Query: 1559 SGDVSHSRLGEIHAVLYLMSLEVSIDQ--NK*RRHETSKSLL 1678
+ D +H R EI VL L+ +DQ K ET ++LL
Sbjct: 459 ADDQAHPRCFEIWEVLRLL-----VDQMAQKPDEEETLRALL 495