BLASTX nr result

ID: Catharanthus23_contig00013534 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00013534
         (291 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006395909.1| hypothetical protein EUTSA_v10005609mg, part...    64   2e-08
ref|XP_006393591.1| hypothetical protein EUTSA_v10012301mg, part...    64   3e-08
emb|CAN83211.1| hypothetical protein VITISV_010890 [Vitis vinifera]    62   6e-08
emb|CAN63337.1| hypothetical protein VITISV_033711 [Vitis vinifera]    61   2e-07
ref|XP_002883786.1| predicted protein [Arabidopsis lyrata subsp....    58   1e-06
ref|XP_003633856.1| PREDICTED: structural maintenance of chromos...    57   2e-06
gb|ACQ44233.1| hypothetical protein [Arabis alpina]                    55   9e-06

>ref|XP_006395909.1| hypothetical protein EUTSA_v10005609mg, partial [Eutrema
           salsugineum] gi|557092548|gb|ESQ33195.1| hypothetical
           protein EUTSA_v10005609mg, partial [Eutrema salsugineum]
          Length = 341

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 31/97 (31%), Positives = 51/97 (52%), Gaps = 4/97 (4%)
 Frame = +2

Query: 2   FGSLPDILPP-IPKLGYQTWIRKMTGPTYAIPL---HFYAELRVPWIFCWSYKISQLYPK 169
           FG +  I PP I K  Y  + + +       PL   +F+A++ +PWI  W + +    P 
Sbjct: 133 FGPIDQIYPPEIIKTSYPFYTKHLPNTNPIGPLNKIYFHADMGIPWICSWHFNLVLALPN 192

Query: 170 EFPMSLIREFKIKWWTSYSVELCSQEAVLKFIQSTQQ 280
             P SL++EF++KWW  Y++E CS   + K   + +Q
Sbjct: 193 -MPYSLVKEFRVKWWDKYNIERCSLTNIKKLFDANKQ 228


>ref|XP_006393591.1| hypothetical protein EUTSA_v10012301mg, partial [Eutrema
           salsugineum] gi|557090169|gb|ESQ30877.1| hypothetical
           protein EUTSA_v10012301mg, partial [Eutrema salsugineum]
          Length = 241

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 25/63 (39%), Positives = 40/63 (63%)
 Frame = +2

Query: 95  LHFYAELRVPWIFCWSYKISQLYPKEFPMSLIREFKIKWWTSYSVELCSQEAVLKFIQST 274
           +HF+ ++ +PWI  W Y +    P + P SL+REF IKWW  Y+++ CS   + KF Q T
Sbjct: 76  IHFHIDMGIPWICSWPYNLIPHLP-DMPYSLVREFCIKWWDKYNLDRCSLANIQKFFQIT 134

Query: 275 QQI 283
           +++
Sbjct: 135 KEV 137


>emb|CAN83211.1| hypothetical protein VITISV_010890 [Vitis vinifera]
          Length = 419

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 33/92 (35%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
 Frame = +2

Query: 2   FGSLPDILPPIPKLGYQTWIRKMTGPTYAIP--LHFYAELRVPWIFCWSYKISQLYPKEF 175
           FG L  I PP  +  +  +  K +      P  L F + LR+PWI  W+    Q  P  F
Sbjct: 240 FGLLDSIFPPEIQEKFNFYKSKTSSQNINQPRLLTFCSRLRIPWILTWNIIKKQEQPLPF 299

Query: 176 PMSLIREFKIKWWTSYSVELCSQEAVLKFIQS 271
           P+SL REF IKWW  ++ +   Q+ VL+ I +
Sbjct: 300 PLSLSREFSIKWWDKFNHDFVCQQKVLQLIST 331


>emb|CAN63337.1| hypothetical protein VITISV_033711 [Vitis vinifera]
          Length = 395

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 33/92 (35%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
 Frame = +2

Query: 2   FGSLPDILPPIPKLGYQTWIRKMTGPTYAIP--LHFYAELRVPWIFCWSYKISQLYPKEF 175
           FG L  I PP  +  +  +  K +      P  L F + LR+PWIF W+    Q  P  F
Sbjct: 253 FGLLDSIFPPDIQEKFNFYKSKTSSQNITQPRLLTFCSRLRIPWIFXWNIIKKQEQPLPF 312

Query: 176 PMSLIREFKIKWWTSYSVELCSQEAVLKFIQS 271
           P+SL REF IKW   ++ +   Q+ VL+ I +
Sbjct: 313 PLSLSREFNIKWXDKFNHDFVCQQKVLQLIST 344


>ref|XP_002883786.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297329626|gb|EFH60045.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 327

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 24/62 (38%), Positives = 35/62 (56%)
 Frame = +2

Query: 95  LHFYAELRVPWIFCWSYKISQLYPKEFPMSLIREFKIKWWTSYSVELCSQEAVLKFIQST 274
           + F+ ++ +PWI  W Y +  L P   P SL+RE++IKWW  Y +  CS   + K  Q T
Sbjct: 160 ISFHIDMGIPWICSWHYNLILLLPG-MPYSLVREYRIKWWDKYDLNRCSLTNIAKLFQIT 218

Query: 275 QQ 280
            Q
Sbjct: 219 SQ 220


>ref|XP_003633856.1| PREDICTED: structural maintenance of chromosomes protein 4-like
           [Vitis vinifera]
          Length = 1486

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 25/57 (43%), Positives = 34/57 (59%)
 Frame = +2

Query: 95  LHFYAELRVPWIFCWSYKISQLYPKEFPMSLIREFKIKWWTSYSVELCSQEAVLKFI 265
           L F + LR+PWI  W+    Q  P  FP+SL REF IKWW  ++ +   Q+ VL+ I
Sbjct: 56  LTFCSRLRIPWILTWNIIKKQEQPLPFPLSLSREFSIKWWDKFNHDFVCQQKVLQLI 112


>gb|ACQ44233.1| hypothetical protein [Arabis alpina]
          Length = 373

 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 22/62 (35%), Positives = 36/62 (58%)
 Frame = +2

Query: 101 FYAELRVPWIFCWSYKISQLYPKEFPMSLIREFKIKWWTSYSVELCSQEAVLKFIQSTQQ 280
           F+ E+ +PWI  W + +  + P   P SLI+E+++KWW  Y+++ CS   + K  Q   Q
Sbjct: 252 FHIEMGLPWICSWHFNLDIVLPG-MPFSLIKEYRVKWWDKYNLDRCSISNIAKHFQILSQ 310

Query: 281 IQ 286
            Q
Sbjct: 311 TQ 312


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