BLASTX nr result
ID: Catharanthus23_contig00012353
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00012353
(728 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EPS74529.1| hypothetical protein M569_00246 [Genlisea aurea] 103 1e-30
ref|XP_002863224.1| hypothetical protein ARALYDRAFT_497141 [Arab... 94 1e-25
emb|CAN66877.1| hypothetical protein VITISV_009278 [Vitis vinifera] 112 9e-23
prf||1211235DD NADH dehydrogenase 2-like ORF 180 107 4e-21
gb|EPS74510.1| hypothetical protein M569_00227, partial [Genlise... 104 3e-20
ref|XP_006837987.1| hypothetical protein AMTR_s00102p00105080 [A... 93 1e-16
gb|AGQ50376.1| NADH-plastoquinone oxidoreductase subunit 2 (chlo... 88 2e-15
ref|XP_004228570.1| PREDICTED: NAD(P)H-quinone oxidoreductase su... 88 3e-15
ref|YP_008592685.1| NADH-plastoquinone oxidoreductase subunit 2 ... 87 7e-15
ref|YP_817527.1| NADH-plastoquinone oxidoreductase subunit 2 [Co... 86 9e-15
ref|XP_003591523.1| NAD(P)H-quinone oxidoreductase subunit 2 A [... 84 4e-14
ref|XP_002888392.1| NADH dehydrogenase ND2 [Arabidopsis lyrata s... 82 2e-13
ref|YP_817542.1| NADH-plastoquinone oxidoreductase subunit 2 [Co... 80 5e-13
ref|XP_003599578.1| NAD(P)H-quinone oxidoreductase subunit 2 A [... 76 1e-11
ref|XP_003631501.1| PREDICTED: LOW QUALITY PROTEIN: NAD(P)H-quin... 72 2e-10
ref|XP_004514805.1| PREDICTED: NAD(P)H-quinone oxidoreductase su... 72 2e-10
ref|XP_003631517.1| PREDICTED: LOW QUALITY PROTEIN: NAD(P)H-quin... 67 5e-09
ref|YP_358628.1| hypothetical protein PhapfoPp082 [Phalaenopsis ... 65 2e-08
ref|XP_002531939.1| NADH dehydrogenase, putative [Ricinus commun... 61 4e-07
ref|XP_002533501.1| NADH dehydrogenase, putative [Ricinus commun... 61 4e-07
>gb|EPS74529.1| hypothetical protein M569_00246 [Genlisea aurea]
Length = 74
Score = 103 bits (257), Expect(2) = 1e-30
Identities = 44/49 (89%), Positives = 48/49 (97%)
Frame = -3
Query: 435 MLHSWFSSFRDYECNKSIRRQKDHPKMIISWLLRTN*IRWFYFSIFLTC 289
MLHSWFSSFRDYECN+SIRRQ+DHPKM++SWLLRTN IRWFYFSIFLTC
Sbjct: 1 MLHSWFSSFRDYECNRSIRRQRDHPKMLMSWLLRTNEIRWFYFSIFLTC 49
Score = 57.0 bits (136), Expect(2) = 1e-30
Identities = 27/28 (96%), Positives = 27/28 (96%)
Frame = -2
Query: 292 LLCSYGTKVEKIEKISHSQPLMKDSSKS 209
L CSYGTKVEKIEKISHSQPLMKDSSKS
Sbjct: 47 LTCSYGTKVEKIEKISHSQPLMKDSSKS 74
>ref|XP_002863224.1| hypothetical protein ARALYDRAFT_497141 [Arabidopsis lyrata subsp.
lyrata] gi|297309058|gb|EFH39483.1| hypothetical protein
ARALYDRAFT_497141 [Arabidopsis lyrata subsp. lyrata]
Length = 440
Score = 94.4 bits (233), Expect(3) = 1e-25
Identities = 41/45 (91%), Positives = 43/45 (95%)
Frame = -3
Query: 423 WFSSFRDYECNKSIRRQKDHPKMIISWLLRTN*IRWFYFSIFLTC 289
WFSSFRDYECN+SIRRQKDHPKMIISWLLRTN IRWF+FSIF TC
Sbjct: 139 WFSSFRDYECNRSIRRQKDHPKMIISWLLRTNQIRWFHFSIFRTC 183
Score = 40.0 bits (92), Expect(3) = 1e-25
Identities = 19/22 (86%), Positives = 19/22 (86%)
Frame = -1
Query: 254 KNQSFTTTDEGFLEKLRITNPF 189
KNQSFTTTDEGFLEKLRI F
Sbjct: 194 KNQSFTTTDEGFLEKLRIIVAF 215
Score = 29.3 bits (64), Expect(3) = 1e-25
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -2
Query: 286 CSYGTKVEKIEK 251
CSYGTKVEKIEK
Sbjct: 183 CSYGTKVEKIEK 194
>emb|CAN66877.1| hypothetical protein VITISV_009278 [Vitis vinifera]
Length = 158
Score = 112 bits (281), Expect = 9e-23
Identities = 50/53 (94%), Positives = 51/53 (96%)
Frame = -3
Query: 726 LLTYTKECGSFEKFLPLYLSLRCLDFSKLHGHAEEKCYPHSDQDRTLTCSNNN 568
LLTYTKECGSF+KFLPLYLSLRCLDFSKLHGHAEEKCYPHSDQD T TCSNNN
Sbjct: 106 LLTYTKECGSFDKFLPLYLSLRCLDFSKLHGHAEEKCYPHSDQDITFTCSNNN 158
>prf||1211235DD NADH dehydrogenase 2-like ORF 180
Length = 180
Score = 107 bits (267), Expect = 4e-21
Identities = 50/51 (98%), Positives = 50/51 (98%)
Frame = -2
Query: 727 TPDVYEGVRFVREIPTSLSISEMFGFFKTPWTCRREMLSPLGPRQNFDLFK 575
TPDVYEGVRFVREIPTSLSISEMFGFFKTPWTCRREMLSPLGPRQNF LFK
Sbjct: 130 TPDVYEGVRFVREIPTSLSISEMFGFFKTPWTCRREMLSPLGPRQNFYLFK 180
>gb|EPS74510.1| hypothetical protein M569_00227, partial [Genlisea aurea]
Length = 170
Score = 104 bits (260), Expect = 3e-20
Identities = 48/50 (96%), Positives = 49/50 (98%)
Frame = -2
Query: 724 PDVYEGVRFVREIPTSLSISEMFGFFKTPWTCRREMLSPLGPRQNFDLFK 575
PDVYEGVRFVREIPTSLSISEMFGFFKTPWTCR EMLSPLGPRQNF+LFK
Sbjct: 121 PDVYEGVRFVREIPTSLSISEMFGFFKTPWTCRGEMLSPLGPRQNFELFK 170
>ref|XP_006837987.1| hypothetical protein AMTR_s00102p00105080 [Amborella trichopoda]
gi|548840402|gb|ERN00556.1| hypothetical protein
AMTR_s00102p00105080 [Amborella trichopoda]
Length = 183
Score = 92.8 bits (229), Expect = 1e-16
Identities = 43/49 (87%), Positives = 46/49 (93%), Gaps = 2/49 (4%)
Frame = -2
Query: 727 TPDVYEGVRFVREIPTSLSIS--EMFGFFKTPWTCRREMLSPLGPRQNF 587
TPDVYEGVRFVR+IPTS+SIS +MFGFFKTPWTCRREMLSPLGPR NF
Sbjct: 130 TPDVYEGVRFVRQIPTSISISISQMFGFFKTPWTCRREMLSPLGPRHNF 178
>gb|AGQ50376.1| NADH-plastoquinone oxidoreductase subunit 2 (chloroplast) [Rumex
acetosa] gi|523582329|gb|AGQ50382.1| NADH-plastoquinone
oxidoreductase subunit 2 (chloroplast) [Rumex acetosa]
Length = 544
Score = 88.2 bits (217), Expect = 2e-15
Identities = 40/43 (93%), Positives = 41/43 (95%)
Frame = -2
Query: 727 TPDVYEGVRFVREIPTSLSISEMFGFFKTPWTCRREMLSPLGP 599
TPDVYEGVRFVR+IP SLSISEMFGFFKTPWTCRREMLSPL P
Sbjct: 253 TPDVYEGVRFVRKIPRSLSISEMFGFFKTPWTCRREMLSPLSP 295
>ref|XP_004228570.1| PREDICTED: NAD(P)H-quinone oxidoreductase subunit 2 A,
chloroplastic-like [Solanum lycopersicum]
Length = 541
Score = 87.8 bits (216), Expect = 3e-15
Identities = 40/40 (100%), Positives = 40/40 (100%)
Frame = -2
Query: 727 TPDVYEGVRFVREIPTSLSISEMFGFFKTPWTCRREMLSP 608
TPDVYEGVRFVREIPTSLSISEMFGFFKTPWTCRREMLSP
Sbjct: 253 TPDVYEGVRFVREIPTSLSISEMFGFFKTPWTCRREMLSP 292
>ref|YP_008592685.1| NADH-plastoquinone oxidoreductase subunit 2 (chloroplast) [Berberis
bealei] gi|536462726|gb|AGU37091.1| NADH-plastoquinone
oxidoreductase subunit 2 (chloroplast) [Berberis bealei]
Length = 545
Score = 86.7 bits (213), Expect = 7e-15
Identities = 39/43 (90%), Positives = 41/43 (95%)
Frame = -2
Query: 727 TPDVYEGVRFVREIPTSLSISEMFGFFKTPWTCRREMLSPLGP 599
TPDVYEGVRFVREIPTS+SISE+FGFFKT WTCRREMLSPL P
Sbjct: 253 TPDVYEGVRFVREIPTSISISEIFGFFKTSWTCRREMLSPLSP 295
>ref|YP_817527.1| NADH-plastoquinone oxidoreductase subunit 2 [Coffea arabica]
gi|288561930|sp|P0CC48.1|NU2C1_COFAR RecName:
Full=NAD(P)H-quinone oxidoreductase subunit 2 A,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase,
subunit 2 A; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 2 A gi|116242208|gb|ABJ89723.1|
NADH-plastoquinone oxidoreductase subunit 2 [Coffea
arabica]
Length = 541
Score = 86.3 bits (212), Expect = 9e-15
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = -2
Query: 727 TPDVYEGVRFVREIPTSLSISEMFGFFKTPWTCRREMLSP 608
TPDVYEGVRFVREIPTSLSISEMFGFFKTPWTCRRE+LSP
Sbjct: 253 TPDVYEGVRFVREIPTSLSISEMFGFFKTPWTCRREILSP 292
>ref|XP_003591523.1| NAD(P)H-quinone oxidoreductase subunit 2 A [Medicago truncatula]
gi|355480571|gb|AES61774.1| NAD(P)H-quinone
oxidoreductase subunit 2 A [Medicago truncatula]
Length = 172
Score = 84.3 bits (207), Expect = 4e-14
Identities = 39/42 (92%), Positives = 40/42 (95%)
Frame = -2
Query: 727 TPDVYEGVRFVREIPTSLSISEMFGFFKTPWTCRREMLSPLG 602
TPDVYEGVRFVREIPTSLSISEMFGFFKT WTCRR+ML PLG
Sbjct: 130 TPDVYEGVRFVREIPTSLSISEMFGFFKTLWTCRRDMLFPLG 171
>ref|XP_002888392.1| NADH dehydrogenase ND2 [Arabidopsis lyrata subsp. lyrata]
gi|297334233|gb|EFH64651.1| NADH dehydrogenase ND2
[Arabidopsis lyrata subsp. lyrata]
Length = 425
Score = 82.0 bits (201), Expect = 2e-13
Identities = 40/60 (66%), Positives = 43/60 (71%), Gaps = 4/60 (6%)
Frame = -3
Query: 429 HSW----FSSFRDYECNKSIRRQKDHPKMIISWLLRTN*IRWFYFSIFLTCFAPTEPRSK 262
H W + RDYECN+SIRRQKDHPKMIISWLLRTN IRWF+FSIF T A SK
Sbjct: 127 HQWTPDVYEGVRDYECNRSIRRQKDHPKMIISWLLRTNQIRWFHFSIFRTFVAFLSVTSK 186
>ref|YP_817542.1| NADH-plastoquinone oxidoreductase subunit 2 [Coffea arabica]
gi|288562000|sp|P0CC49.1|NU2C2_COFAR RecName:
Full=NAD(P)H-quinone oxidoreductase subunit 2 B,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase,
subunit 2 B; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 2 B gi|116242225|gb|ABJ89740.1|
NADH-plastoquinone oxidoreductase subunit 2 [Coffea
arabica]
Length = 540
Score = 80.5 bits (197), Expect = 5e-13
Identities = 36/37 (97%), Positives = 37/37 (100%)
Frame = -2
Query: 727 TPDVYEGVRFVREIPTSLSISEMFGFFKTPWTCRREM 617
TPDVYEGVRFVREIPTSLSISEMFGFFKTPWTCRRE+
Sbjct: 253 TPDVYEGVRFVREIPTSLSISEMFGFFKTPWTCRREI 289
>ref|XP_003599578.1| NAD(P)H-quinone oxidoreductase subunit 2 A [Medicago truncatula]
gi|355488626|gb|AES69829.1| NAD(P)H-quinone
oxidoreductase subunit 2 A [Medicago truncatula]
Length = 871
Score = 75.9 bits (185), Expect = 1e-11
Identities = 35/42 (83%), Positives = 38/42 (90%)
Frame = -2
Query: 727 TPDVYEGVRFVREIPTSLSISEMFGFFKTPWTCRREMLSPLG 602
TPDVYEGVRFVREIPTSLSISEMFGFFKT WTCRR++ +G
Sbjct: 557 TPDVYEGVRFVREIPTSLSISEMFGFFKTLWTCRRDIYYIVG 598
>ref|XP_003631501.1| PREDICTED: LOW QUALITY PROTEIN: NAD(P)H-quinone oxidoreductase
subunit 2 A, chloroplastic-like [Vitis vinifera]
Length = 541
Score = 72.0 bits (175), Expect = 2e-10
Identities = 33/40 (82%), Positives = 35/40 (87%)
Frame = -2
Query: 727 TPDVYEGVRFVREIPTSLSISEMFGFFKTPWTCRREMLSP 608
TPD+YEGV FV IPTSLSI +MFGFFKT WTCRREMLSP
Sbjct: 253 TPDLYEGVWFVXXIPTSLSIFKMFGFFKTSWTCRREMLSP 292
>ref|XP_004514805.1| PREDICTED: NAD(P)H-quinone oxidoreductase subunit 2 B,
chloroplastic-like [Cicer arietinum]
Length = 864
Score = 71.6 bits (174), Expect = 2e-10
Identities = 33/42 (78%), Positives = 37/42 (88%)
Frame = -2
Query: 727 TPDVYEGVRFVREIPTSLSISEMFGFFKTPWTCRREMLSPLG 602
TPDVYEGVRFV+EIPTS SISEMFGFFKT WTCRR++ +G
Sbjct: 550 TPDVYEGVRFVQEIPTSPSISEMFGFFKTLWTCRRDICYIVG 591
>ref|XP_003631517.1| PREDICTED: LOW QUALITY PROTEIN: NAD(P)H-quinone oxidoreductase
subunit 2 A, chloroplastic-like [Vitis vinifera]
Length = 539
Score = 67.4 bits (163), Expect = 5e-09
Identities = 30/38 (78%), Positives = 33/38 (86%)
Frame = -2
Query: 721 DVYEGVRFVREIPTSLSISEMFGFFKTPWTCRREMLSP 608
D+YEGV FV+ IP SLSI EMFGFFKT WTC+REMLSP
Sbjct: 255 DLYEGVXFVQXIPASLSIFEMFGFFKTSWTCKREMLSP 292
>ref|YP_358628.1| hypothetical protein PhapfoPp082 [Phalaenopsis aphrodite subsp.
formosana] gi|58802845|gb|AAW82565.1| hypothetical
protein [Phalaenopsis aphrodite subsp. formosana]
Length = 81
Score = 65.5 bits (158), Expect = 2e-08
Identities = 31/34 (91%), Positives = 31/34 (91%)
Frame = +3
Query: 3 ATTGVGESESKRGFLTSFSHSKPCMRLSSHTAPK 104
ATTGVGESESKRGFLTS SHSKPCMRLS TAPK
Sbjct: 48 ATTGVGESESKRGFLTSLSHSKPCMRLSPRTAPK 81
>ref|XP_002531939.1| NADH dehydrogenase, putative [Ricinus communis]
gi|223528418|gb|EEF30453.1| NADH dehydrogenase, putative
[Ricinus communis]
Length = 60
Score = 60.8 bits (146), Expect = 4e-07
Identities = 28/30 (93%), Positives = 29/30 (96%)
Frame = -2
Query: 727 TPDVYEGVRFVREIPTSLSISEMFGFFKTP 638
TPDVYEGVRFVR+IPTSLSISEM GFFKTP
Sbjct: 31 TPDVYEGVRFVRKIPTSLSISEMLGFFKTP 60
>ref|XP_002533501.1| NADH dehydrogenase, putative [Ricinus communis]
gi|223526645|gb|EEF28888.1| NADH dehydrogenase, putative
[Ricinus communis]
Length = 159
Score = 60.8 bits (146), Expect = 4e-07
Identities = 28/30 (93%), Positives = 29/30 (96%)
Frame = -2
Query: 727 TPDVYEGVRFVREIPTSLSISEMFGFFKTP 638
TPDVYEGVRFVR+IPTSLSISEM GFFKTP
Sbjct: 130 TPDVYEGVRFVRKIPTSLSISEMLGFFKTP 159