BLASTX nr result
ID: Catharanthus23_contig00012245
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00012245
(622 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002281273.1| PREDICTED: exosome complex exonuclease RRP46... 110 2e-22
emb|CBI20856.3| unnamed protein product [Vitis vinifera] 110 2e-22
ref|XP_002324223.2| hypothetical protein POPTR_0018s00300g [Popu... 107 3e-21
ref|XP_006476041.1| PREDICTED: exosome complex exonuclease RRP46... 106 5e-21
ref|XP_006450678.1| hypothetical protein CICLE_v10009310mg [Citr... 106 5e-21
gb|EXB39324.1| Exosome complex exonuclease RRP46-like protein [M... 98 2e-18
ref|XP_006359768.1| PREDICTED: exosome complex exonuclease RRP46... 97 5e-18
gb|EMJ24979.1| hypothetical protein PRUPE_ppa010603mg [Prunus pe... 97 5e-18
gb|EMJ24978.1| hypothetical protein PRUPE_ppa010603mg [Prunus pe... 97 5e-18
gb|EXB63842.1| hypothetical protein L484_021115 [Morus notabilis] 96 6e-18
gb|EOY29741.1| Ribosomal protein S5 domain 2-like superfamily pr... 96 6e-18
ref|XP_004245172.1| PREDICTED: exosome complex exonuclease RRP46... 93 5e-17
ref|XP_004164036.1| PREDICTED: exosome complex exonuclease RRP46... 93 7e-17
ref|XP_004150286.1| PREDICTED: exosome complex exonuclease RRP46... 93 7e-17
ref|XP_004291185.1| PREDICTED: exosome complex exonuclease RRP46... 92 9e-17
ref|XP_003552384.1| PREDICTED: exosome complex exonuclease RRP46... 89 8e-16
ref|NP_190207.1| ribosomal protein S5 domain 2-like superfamily ... 88 2e-15
ref|XP_002877464.1| hypothetical protein ARALYDRAFT_485002 [Arab... 88 2e-15
ref|XP_003534569.1| PREDICTED: exosome complex exonuclease RRP46... 87 3e-15
gb|AFK43786.1| unknown [Lotus japonicus] 87 4e-15
>ref|XP_002281273.1| PREDICTED: exosome complex exonuclease RRP46 homolog [Vitis
vinifera]
Length = 245
Score = 110 bits (276), Expect = 2e-22
Identities = 56/75 (74%), Positives = 64/75 (85%)
Frame = -2
Query: 618 MKAFVDLVFPNSIQSVIPKGSSEVGGESIEDGIITSVTHGVISVEDYLLCIERGQAASEK 439
MKAF LVFPNS S+IP+GSS + GE +E GIITSVTHGV+SV+DYL C+ERGQAAS K
Sbjct: 165 MKAFAYLVFPNSAISIIPEGSSHMEGELMEHGIITSVTHGVMSVDDYLHCLERGQAASTK 224
Query: 438 LSDFLRRSLQSQAPN 394
+S FLRRSLQSQAPN
Sbjct: 225 MSAFLRRSLQSQAPN 239
>emb|CBI20856.3| unnamed protein product [Vitis vinifera]
Length = 243
Score = 110 bits (276), Expect = 2e-22
Identities = 56/75 (74%), Positives = 64/75 (85%)
Frame = -2
Query: 618 MKAFVDLVFPNSIQSVIPKGSSEVGGESIEDGIITSVTHGVISVEDYLLCIERGQAASEK 439
MKAF LVFPNS S+IP+GSS + GE +E GIITSVTHGV+SV+DYL C+ERGQAAS K
Sbjct: 163 MKAFAYLVFPNSAISIIPEGSSHMEGELMEHGIITSVTHGVMSVDDYLHCLERGQAASTK 222
Query: 438 LSDFLRRSLQSQAPN 394
+S FLRRSLQSQAPN
Sbjct: 223 MSAFLRRSLQSQAPN 237
>ref|XP_002324223.2| hypothetical protein POPTR_0018s00300g [Populus trichocarpa]
gi|550317698|gb|EEF02788.2| hypothetical protein
POPTR_0018s00300g [Populus trichocarpa]
Length = 243
Score = 107 bits (267), Expect = 3e-21
Identities = 53/75 (70%), Positives = 63/75 (84%)
Frame = -2
Query: 618 MKAFVDLVFPNSIQSVIPKGSSEVGGESIEDGIITSVTHGVISVEDYLLCIERGQAASEK 439
M+ F LVFPNS+ SV+P+G S V GE +E GIITSVTHGV+SVE+YL C+ERG+AAS K
Sbjct: 163 MRGFAYLVFPNSVVSVLPEGLSHVEGEPMEHGIITSVTHGVMSVEEYLKCLERGRAASTK 222
Query: 438 LSDFLRRSLQSQAPN 394
LSDFLRRSLQSQ P+
Sbjct: 223 LSDFLRRSLQSQLPS 237
>ref|XP_006476041.1| PREDICTED: exosome complex exonuclease RRP46 homolog isoform X1
[Citrus sinensis] gi|568844330|ref|XP_006476042.1|
PREDICTED: exosome complex exonuclease RRP46 homolog
isoform X2 [Citrus sinensis]
gi|568844332|ref|XP_006476043.1| PREDICTED: exosome
complex exonuclease RRP46 homolog isoform X3 [Citrus
sinensis]
Length = 243
Score = 106 bits (265), Expect = 5e-21
Identities = 54/74 (72%), Positives = 62/74 (83%)
Frame = -2
Query: 618 MKAFVDLVFPNSIQSVIPKGSSEVGGESIEDGIITSVTHGVISVEDYLLCIERGQAASEK 439
MKAF LVFPNSI SV+P+GSS V GE +E GIITSVTHG +SV+DY C+ERG+AAS K
Sbjct: 163 MKAFAYLVFPNSILSVLPEGSSLVQGEPMEHGIITSVTHGAMSVDDYFHCLERGRAASAK 222
Query: 438 LSDFLRRSLQSQAP 397
LSDFLRRSLQS+ P
Sbjct: 223 LSDFLRRSLQSKLP 236
>ref|XP_006450678.1| hypothetical protein CICLE_v10009310mg [Citrus clementina]
gi|567917348|ref|XP_006450680.1| hypothetical protein
CICLE_v10009310mg [Citrus clementina]
gi|557553904|gb|ESR63918.1| hypothetical protein
CICLE_v10009310mg [Citrus clementina]
gi|557553906|gb|ESR63920.1| hypothetical protein
CICLE_v10009310mg [Citrus clementina]
Length = 243
Score = 106 bits (265), Expect = 5e-21
Identities = 54/74 (72%), Positives = 62/74 (83%)
Frame = -2
Query: 618 MKAFVDLVFPNSIQSVIPKGSSEVGGESIEDGIITSVTHGVISVEDYLLCIERGQAASEK 439
MKAF LVFPNSI SV+P+GSS V GE +E GIITSVTHG +SV+DY C+ERG+AAS K
Sbjct: 163 MKAFAYLVFPNSILSVLPEGSSLVQGEPMEHGIITSVTHGAMSVDDYFHCLERGRAASAK 222
Query: 438 LSDFLRRSLQSQAP 397
LSDFLRRSLQS+ P
Sbjct: 223 LSDFLRRSLQSKLP 236
>gb|EXB39324.1| Exosome complex exonuclease RRP46-like protein [Morus notabilis]
Length = 313
Score = 97.8 bits (242), Expect = 2e-18
Identities = 47/74 (63%), Positives = 60/74 (81%)
Frame = -2
Query: 618 MKAFVDLVFPNSIQSVIPKGSSEVGGESIEDGIITSVTHGVISVEDYLLCIERGQAASEK 439
MKAF LVFPNS+ S +P+GS +V GE +E+GIITSVT G ++V+DY C+ERG+AA+EK
Sbjct: 239 MKAFAYLVFPNSVLSALPEGSPKVEGEPMENGIITSVTQGAMAVDDYFHCLERGRAANEK 298
Query: 438 LSDFLRRSLQSQAP 397
+S FLRRSLQ Q P
Sbjct: 299 MSAFLRRSLQPQLP 312
>ref|XP_006359768.1| PREDICTED: exosome complex exonuclease RRP46 homolog [Solanum
tuberosum]
Length = 238
Score = 96.7 bits (239), Expect = 5e-18
Identities = 47/72 (65%), Positives = 60/72 (83%)
Frame = -2
Query: 618 MKAFVDLVFPNSIQSVIPKGSSEVGGESIEDGIITSVTHGVISVEDYLLCIERGQAASEK 439
MKAFV LVFPNS SV+P+ + +V GE +E G+ITS THGV+SV+DY+ C+ERG+AA+ K
Sbjct: 163 MKAFVYLVFPNSTLSVLPEEALKVRGEPMEHGLITSSTHGVMSVDDYIRCLERGRAATSK 222
Query: 438 LSDFLRRSLQSQ 403
LSDF RR+LQSQ
Sbjct: 223 LSDFFRRNLQSQ 234
>gb|EMJ24979.1| hypothetical protein PRUPE_ppa010603mg [Prunus persica]
Length = 243
Score = 96.7 bits (239), Expect = 5e-18
Identities = 46/74 (62%), Positives = 59/74 (79%)
Frame = -2
Query: 618 MKAFVDLVFPNSIQSVIPKGSSEVGGESIEDGIITSVTHGVISVEDYLLCIERGQAASEK 439
MKAF LVFPNS+ S++P+ +VGGE +E GIITSVT G +SV+DYL C+ERG+AA+ K
Sbjct: 163 MKAFAYLVFPNSVLSILPEEQLQVGGEPVEHGIITSVTQGAMSVDDYLHCLERGRAATAK 222
Query: 438 LSDFLRRSLQSQAP 397
+S FLR+SLQ Q P
Sbjct: 223 MSAFLRKSLQPQLP 236
>gb|EMJ24978.1| hypothetical protein PRUPE_ppa010603mg [Prunus persica]
Length = 235
Score = 96.7 bits (239), Expect = 5e-18
Identities = 46/74 (62%), Positives = 59/74 (79%)
Frame = -2
Query: 618 MKAFVDLVFPNSIQSVIPKGSSEVGGESIEDGIITSVTHGVISVEDYLLCIERGQAASEK 439
MKAF LVFPNS+ S++P+ +VGGE +E GIITSVT G +SV+DYL C+ERG+AA+ K
Sbjct: 155 MKAFAYLVFPNSVLSILPEEQLQVGGEPVEHGIITSVTQGAMSVDDYLHCLERGRAATAK 214
Query: 438 LSDFLRRSLQSQAP 397
+S FLR+SLQ Q P
Sbjct: 215 MSAFLRKSLQPQLP 228
>gb|EXB63842.1| hypothetical protein L484_021115 [Morus notabilis]
Length = 217
Score = 96.3 bits (238), Expect = 6e-18
Identities = 47/74 (63%), Positives = 61/74 (82%)
Frame = -2
Query: 618 MKAFVDLVFPNSIQSVIPKGSSEVGGESIEDGIITSVTHGVISVEDYLLCIERGQAASEK 439
MKAF LVFPNS+ SV+P+GS +V GE +E+GIITSVT G ++V++Y C+ERG+AA+EK
Sbjct: 143 MKAFPYLVFPNSVLSVLPEGSPKVEGELMENGIITSVTQGAMAVDNYFHCLERGRAANEK 202
Query: 438 LSDFLRRSLQSQAP 397
+S FLRRSLQ Q P
Sbjct: 203 MSAFLRRSLQPQLP 216
>gb|EOY29741.1| Ribosomal protein S5 domain 2-like superfamily protein isoform 1
[Theobroma cacao]
Length = 240
Score = 96.3 bits (238), Expect = 6e-18
Identities = 48/70 (68%), Positives = 58/70 (82%)
Frame = -2
Query: 618 MKAFVDLVFPNSIQSVIPKGSSEVGGESIEDGIITSVTHGVISVEDYLLCIERGQAASEK 439
MK+F LVFPNS+ SV+P+GS V GE +E GI+TSVTHG++SV+DY C+ERG AAS K
Sbjct: 163 MKSFAYLVFPNSVHSVLPEGS--VQGEPMEHGIVTSVTHGIMSVDDYFYCLERGCAASAK 220
Query: 438 LSDFLRRSLQ 409
LSDFLRRSLQ
Sbjct: 221 LSDFLRRSLQ 230
>ref|XP_004245172.1| PREDICTED: exosome complex exonuclease RRP46 homolog [Solanum
lycopersicum]
Length = 232
Score = 93.2 bits (230), Expect = 5e-17
Identities = 45/70 (64%), Positives = 58/70 (82%)
Frame = -2
Query: 618 MKAFVDLVFPNSIQSVIPKGSSEVGGESIEDGIITSVTHGVISVEDYLLCIERGQAASEK 439
MKAFV LVFPNS SV+P+ + +V GE +E G+ITS THGV+SV+DY+ C+ERG+AA+ K
Sbjct: 163 MKAFVYLVFPNSTLSVLPEEALKVRGEPMEHGLITSSTHGVMSVDDYIRCLERGRAATSK 222
Query: 438 LSDFLRRSLQ 409
LSDF RR+LQ
Sbjct: 223 LSDFFRRNLQ 232
>ref|XP_004164036.1| PREDICTED: exosome complex exonuclease RRP46 homolog [Cucumis
sativus]
Length = 243
Score = 92.8 bits (229), Expect = 7e-17
Identities = 46/74 (62%), Positives = 59/74 (79%)
Frame = -2
Query: 618 MKAFVDLVFPNSIQSVIPKGSSEVGGESIEDGIITSVTHGVISVEDYLLCIERGQAASEK 439
MKA V LVFPN+ SV+P+GS++ GE +E GIITSVT G +SV+DY+ C+ERG+AA+ K
Sbjct: 163 MKASVHLVFPNAPVSVVPEGSTQGVGEPLEHGIITSVTQGAMSVDDYIHCLERGRAATTK 222
Query: 438 LSDFLRRSLQSQAP 397
+S FLRRSLQ Q P
Sbjct: 223 MSAFLRRSLQPQLP 236
>ref|XP_004150286.1| PREDICTED: exosome complex exonuclease RRP46 homolog [Cucumis
sativus]
Length = 243
Score = 92.8 bits (229), Expect = 7e-17
Identities = 46/74 (62%), Positives = 59/74 (79%)
Frame = -2
Query: 618 MKAFVDLVFPNSIQSVIPKGSSEVGGESIEDGIITSVTHGVISVEDYLLCIERGQAASEK 439
MKA V LVFPN+ SV+P+GS++ GE +E GIITSVT G +SV+DY+ C+ERG+AA+ K
Sbjct: 163 MKASVHLVFPNAPVSVVPEGSTQGVGEPLEHGIITSVTQGAMSVDDYIHCLERGRAATTK 222
Query: 438 LSDFLRRSLQSQAP 397
+S FLRRSLQ Q P
Sbjct: 223 MSAFLRRSLQPQLP 236
>ref|XP_004291185.1| PREDICTED: exosome complex exonuclease RRP46 homolog [Fragaria
vesca subsp. vesca]
Length = 238
Score = 92.4 bits (228), Expect = 9e-17
Identities = 46/74 (62%), Positives = 58/74 (78%)
Frame = -2
Query: 618 MKAFVDLVFPNSIQSVIPKGSSEVGGESIEDGIITSVTHGVISVEDYLLCIERGQAASEK 439
MKAFV LVFPNS+ S +P+G +V GE +E GIITSVT G + VEDYL C+ERG+AA+ K
Sbjct: 163 MKAFVYLVFPNSVLSNLPEGQLKVQGEPMEHGIITSVTQGAMPVEDYLHCLERGRAATAK 222
Query: 438 LSDFLRRSLQSQAP 397
+S FLR+SLQ + P
Sbjct: 223 MSAFLRKSLQPKLP 236
>ref|XP_003552384.1| PREDICTED: exosome complex exonuclease RRP46 homolog isoform X1
[Glycine max] gi|571548374|ref|XP_006602785.1|
PREDICTED: exosome complex exonuclease RRP46 homolog
isoform X2 [Glycine max]
Length = 243
Score = 89.4 bits (220), Expect = 8e-16
Identities = 39/70 (55%), Positives = 59/70 (84%)
Frame = -2
Query: 618 MKAFVDLVFPNSIQSVIPKGSSEVGGESIEDGIITSVTHGVISVEDYLLCIERGQAASEK 439
MKAF++LVFPN+I SV+P+GS + G E + GI+TS+T G +SV+DYL C+ERG+AAS +
Sbjct: 163 MKAFINLVFPNTIVSVLPEGSLQAGSEPMAHGIMTSITQGAMSVDDYLHCLERGRAASAR 222
Query: 438 LSDFLRRSLQ 409
LS+F+R++++
Sbjct: 223 LSEFVRKNIE 232
>ref|NP_190207.1| ribosomal protein S5 domain 2-like superfamily protein [Arabidopsis
thaliana] gi|79314404|ref|NP_001030817.1| ribosomal
protein S5 domain 2-like superfamily protein
[Arabidopsis thaliana] gi|79314427|ref|NP_001030818.1|
ribosomal protein S5 domain 2-like superfamily protein
[Arabidopsis thaliana] gi|79314448|ref|NP_001030819.1|
ribosomal protein S5 domain 2-like superfamily protein
[Arabidopsis thaliana] gi|145332769|ref|NP_001078250.1|
ribosomal protein S5 domain 2-like superfamily protein
[Arabidopsis thaliana] gi|334185757|ref|NP_001190019.1|
ribosomal protein S5 domain 2-like superfamily protein
[Arabidopsis thaliana] gi|7799009|emb|CAB90948.1|
putative protein [Arabidopsis thaliana]
gi|27808554|gb|AAO24557.1| At3g46210 [Arabidopsis
thaliana] gi|110736314|dbj|BAF00127.1| hypothetical
protein [Arabidopsis thaliana]
gi|222423954|dbj|BAH19939.1| AT3G46210 [Arabidopsis
thaliana] gi|222424492|dbj|BAH20201.1| AT3G46210
[Arabidopsis thaliana] gi|332644608|gb|AEE78129.1|
ribosomal protein S5 domain 2-like superfamily protein
[Arabidopsis thaliana] gi|332644609|gb|AEE78130.1|
ribosomal protein S5 domain 2-like superfamily protein
[Arabidopsis thaliana] gi|332644610|gb|AEE78131.1|
ribosomal protein S5 domain 2-like superfamily protein
[Arabidopsis thaliana] gi|332644611|gb|AEE78132.1|
ribosomal protein S5 domain 2-like superfamily protein
[Arabidopsis thaliana] gi|332644612|gb|AEE78133.1|
ribosomal protein S5 domain 2-like superfamily protein
[Arabidopsis thaliana] gi|332644613|gb|AEE78134.1|
ribosomal protein S5 domain 2-like superfamily protein
[Arabidopsis thaliana]
Length = 239
Score = 87.8 bits (216), Expect = 2e-15
Identities = 41/73 (56%), Positives = 54/73 (73%)
Frame = -2
Query: 618 MKAFVDLVFPNSIQSVIPKGSSEVGGESIEDGIITSVTHGVISVEDYLLCIERGQAASEK 439
M AF LVFPN+ SV+P+GSS GE +E GIITS+THGV+SV+DY LC+E G+AA+
Sbjct: 163 MTAFAYLVFPNTTLSVLPEGSSVAEGEPVEHGIITSITHGVMSVDDYFLCVENGRAATAS 222
Query: 438 LSDFLRRSLQSQA 400
LS F R++ Q +
Sbjct: 223 LSAFFRKNFQQSS 235
>ref|XP_002877464.1| hypothetical protein ARALYDRAFT_485002 [Arabidopsis lyrata subsp.
lyrata] gi|297323302|gb|EFH53723.1| hypothetical protein
ARALYDRAFT_485002 [Arabidopsis lyrata subsp. lyrata]
Length = 242
Score = 87.8 bits (216), Expect = 2e-15
Identities = 42/70 (60%), Positives = 53/70 (75%)
Frame = -2
Query: 618 MKAFVDLVFPNSIQSVIPKGSSEVGGESIEDGIITSVTHGVISVEDYLLCIERGQAASEK 439
M AF LVFPN+ SV+P+GSS GE +E GIITSVTHGV+SV+DY LC+E G+AA+
Sbjct: 163 MTAFAYLVFPNTTLSVLPEGSSVAEGEPVEHGIITSVTHGVMSVDDYFLCVENGRAATAS 222
Query: 438 LSDFLRRSLQ 409
LS F R++ Q
Sbjct: 223 LSAFFRKNFQ 232
>ref|XP_003534569.1| PREDICTED: exosome complex exonuclease RRP46 homolog isoform X1
[Glycine max] gi|571479421|ref|XP_006587855.1|
PREDICTED: exosome complex exonuclease RRP46 homolog
isoform X2 [Glycine max]
Length = 243
Score = 87.4 bits (215), Expect = 3e-15
Identities = 39/69 (56%), Positives = 59/69 (85%)
Frame = -2
Query: 618 MKAFVDLVFPNSIQSVIPKGSSEVGGESIEDGIITSVTHGVISVEDYLLCIERGQAASEK 439
MKA+++LVFPN+I SV+P+ SS+VG E + GI+TSVT G +SV+DYL C++RG+AAS +
Sbjct: 163 MKAYINLVFPNTIVSVLPERSSQVGSEPMAHGIMTSVTQGAMSVDDYLHCLDRGRAASAR 222
Query: 438 LSDFLRRSL 412
LS+F+R+++
Sbjct: 223 LSEFVRKNI 231
>gb|AFK43786.1| unknown [Lotus japonicus]
Length = 243
Score = 87.0 bits (214), Expect = 4e-15
Identities = 41/72 (56%), Positives = 58/72 (80%)
Frame = -2
Query: 615 KAFVDLVFPNSIQSVIPKGSSEVGGESIEDGIITSVTHGVISVEDYLLCIERGQAASEKL 436
KAF LVFPN+ SV+P+GSS+ G E + GIITSVT G +SV+DYL C+ERG+A SE+L
Sbjct: 164 KAFAYLVFPNTNISVLPEGSSQGGSEPMAHGIITSVTQGAMSVDDYLRCLERGRATSERL 223
Query: 435 SDFLRRSLQSQA 400
S+FLR++++ ++
Sbjct: 224 SEFLRKNIEPKS 235