BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00012232
         (836 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004245997.1| PREDICTED: DNA-directed RNA polymerase III s...   109   1e-21
ref|XP_006366884.1| PREDICTED: DNA-directed RNA polymerase III s...   107   7e-21
gb|EPS63446.1| hypothetical protein M569_11341, partial [Genlise...   107   7e-21
gb|EMJ10006.1| hypothetical protein PRUPE_ppa024742mg [Prunus pe...   103   6e-20
ref|XP_002324707.1| hypothetical protein POPTR_0018s04220g [Popu...   103   6e-20
ref|XP_002266428.1| PREDICTED: DNA-directed RNA polymerase III s...   103   8e-20
emb|CBI33284.3| unnamed protein product [Vitis vinifera]              102   1e-19
ref|XP_003635403.1| PREDICTED: DNA-directed RNA polymerase III s...   102   1e-19
ref|XP_003635557.1| PREDICTED: DNA-directed RNA polymerase III s...   102   1e-19
gb|EOY25790.1| DNA-directed RNA polymerase III subunit rpc6, put...   101   4e-19
ref|XP_002297621.2| hypothetical protein POPTR_0001s04090g [Popu...    99   1e-18
ref|XP_002509507.1| DNA-directed RNA polymerase III subunit F, p...    98   4e-18
gb|ESW11339.1| hypothetical protein PHAVU_008G021700g [Phaseolus...    95   3e-17
ref|XP_003551792.1| PREDICTED: DNA-directed RNA polymerase III s...    95   3e-17
gb|EXB67305.1| DNA-directed RNA polymerase III subunit RPC6 [Mor...    94   5e-17
ref|XP_004148278.1| PREDICTED: DNA-directed RNA polymerase III s...    94   5e-17
ref|XP_003529842.1| PREDICTED: DNA-directed RNA polymerase III s...    94   8e-17
dbj|BAJ53222.1| JHL06P13.1 [Jatropha curcas]                           93   1e-16
ref|XP_006475959.1| PREDICTED: DNA-directed RNA polymerase III s...    91   5e-16
ref|XP_006475958.1| PREDICTED: DNA-directed RNA polymerase III s...    91   5e-16

>ref|XP_004245997.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like
           isoform 1 [Solanum lycopersicum]
           gi|460400960|ref|XP_004245998.1| PREDICTED: DNA-directed
           RNA polymerase III subunit rpc6-like isoform 2 [Solanum
           lycopersicum]
          Length = 237

 Score =  109 bits (273), Expect = 1e-21
 Identities = 52/67 (77%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
 Frame = +3

Query: 3   GEYHSIPIGEQCYRIANVAGVDKGPK-IGAMASIPCGMCPRISQCTPDGIISPRTCVYYK 179
           GEYHSIPIG  CYRIA   GV  GPK IG MASIPCG CPRIS CTPDGIISP+TCVY+ 
Sbjct: 173 GEYHSIPIGSVCYRIA--VGVTSGPKTIGPMASIPCGACPRISVCTPDGIISPKTCVYFT 230

Query: 180 KWLDIDF 200
           KWLDI+F
Sbjct: 231 KWLDIEF 237


>ref|XP_006366884.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like
           [Solanum tuberosum]
          Length = 237

 Score =  107 bits (266), Expect = 7e-21
 Identities = 51/67 (76%), Positives = 54/67 (80%), Gaps = 1/67 (1%)
 Frame = +3

Query: 3   GEYHSIPIGEQCYRIANVAGVDKGPK-IGAMASIPCGMCPRISQCTPDGIISPRTCVYYK 179
           GEYHSIPIG  CYRIA   G   GPK IG MASIPCG CPRIS CTPDGIISP+TCVYY 
Sbjct: 173 GEYHSIPIGSACYRIA--VGDTSGPKTIGPMASIPCGACPRISVCTPDGIISPKTCVYYT 230

Query: 180 KWLDIDF 200
           KWL+I+F
Sbjct: 231 KWLNIEF 237


>gb|EPS63446.1| hypothetical protein M569_11341, partial [Genlisea aurea]
          Length = 179

 Score =  107 bits (266), Expect = 7e-21
 Identities = 45/66 (68%), Positives = 51/66 (77%)
 Frame = +3

Query: 3   GEYHSIPIGEQCYRIANVAGVDKGPKIGAMASIPCGMCPRISQCTPDGIISPRTCVYYKK 182
           G+Y  IP GE CYRIA   G  +GP+IG  ASIPCG CPRIS CTPDG+ISP TCVYY K
Sbjct: 114 GDYELIPAGENCYRIATGDGAARGPRIGGFASIPCGACPRISSCTPDGLISPSTCVYYTK 173

Query: 183 WLDIDF 200
           WL++DF
Sbjct: 174 WLNLDF 179


>gb|EMJ10006.1| hypothetical protein PRUPE_ppa024742mg [Prunus persica]
          Length = 236

 Score =  103 bits (258), Expect = 6e-20
 Identities = 43/63 (68%), Positives = 52/63 (82%)
 Frame = +3

Query: 3   GEYHSIPIGEQCYRIANVAGVDKGPKIGAMASIPCGMCPRISQCTPDGIISPRTCVYYKK 182
           GE+ S P+G+ CY+  +  G  + PK+GAMASIPCG+CPRISQCTPDGIISPRTCVY+ K
Sbjct: 173 GEFGSFPVGKVCYKSTSKGGSKREPKVGAMASIPCGVCPRISQCTPDGIISPRTCVYFTK 232

Query: 183 WLD 191
           WLD
Sbjct: 233 WLD 235


>ref|XP_002324707.1| hypothetical protein POPTR_0018s04220g [Populus trichocarpa]
           gi|222866141|gb|EEF03272.1| hypothetical protein
           POPTR_0018s04220g [Populus trichocarpa]
          Length = 239

 Score =  103 bits (258), Expect = 6e-20
 Identities = 44/63 (69%), Positives = 52/63 (82%)
 Frame = +3

Query: 3   GEYHSIPIGEQCYRIANVAGVDKGPKIGAMASIPCGMCPRISQCTPDGIISPRTCVYYKK 182
           GE+ SIP GE CY+  +  G+   PK GA+ASIPCG+CPRISQCTPDGIISP+TCVYY+K
Sbjct: 176 GEFASIPFGEVCYKYISKVGLGGEPKAGALASIPCGVCPRISQCTPDGIISPKTCVYYQK 235

Query: 183 WLD 191
           WLD
Sbjct: 236 WLD 238


>ref|XP_002266428.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
           vinifera]
          Length = 239

 Score =  103 bits (257), Expect = 8e-20
 Identities = 46/64 (71%), Positives = 52/64 (81%), Gaps = 1/64 (1%)
 Frame = +3

Query: 3   GEYHSIPIGEQCYRIANVAGVDKG-PKIGAMASIPCGMCPRISQCTPDGIISPRTCVYYK 179
           GE+ SIPIG  CYR  N  G+  G PKIGAMASIPCG+CPRI+QCTPDGIISP++C YY 
Sbjct: 175 GEFSSIPIGAVCYRCTNKGGLGGGGPKIGAMASIPCGVCPRITQCTPDGIISPKSCAYYA 234

Query: 180 KWLD 191
           KWLD
Sbjct: 235 KWLD 238


>emb|CBI33284.3| unnamed protein product [Vitis vinifera]
          Length = 300

 Score =  102 bits (255), Expect = 1e-19
 Identities = 46/64 (71%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
 Frame = +3

Query: 3   GEYHSIPIGEQCYRIANVAGVDKG-PKIGAMASIPCGMCPRISQCTPDGIISPRTCVYYK 179
           GE+ SIPIG  CYR  N  G+  G P IGAMASIPCG+CPRI+QCTPDGIISP+TC YY 
Sbjct: 236 GEFSSIPIGAVCYRCTNKGGLGGGGPTIGAMASIPCGVCPRITQCTPDGIISPKTCAYYT 295

Query: 180 KWLD 191
           KWLD
Sbjct: 296 KWLD 299


>ref|XP_003635403.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
           vinifera]
          Length = 239

 Score =  102 bits (255), Expect = 1e-19
 Identities = 46/64 (71%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
 Frame = +3

Query: 3   GEYHSIPIGEQCYRIANVAGVDKG-PKIGAMASIPCGMCPRISQCTPDGIISPRTCVYYK 179
           GE+ SIPIG  CYR  N  G+  G P IGAMASIPCG+CPRI+QCTPDGIISP+TC YY 
Sbjct: 175 GEFSSIPIGAVCYRCTNKGGLGGGGPTIGAMASIPCGVCPRITQCTPDGIISPKTCAYYT 234

Query: 180 KWLD 191
           KWLD
Sbjct: 235 KWLD 238


>ref|XP_003635557.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
           vinifera]
          Length = 239

 Score =  102 bits (255), Expect = 1e-19
 Identities = 46/64 (71%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
 Frame = +3

Query: 3   GEYHSIPIGEQCYRIANVAGVDKG-PKIGAMASIPCGMCPRISQCTPDGIISPRTCVYYK 179
           GE+ SIPIG  CYR  N  G+  G P IGAMASIPCG+CPRI+QCTPDGIISP+TC YY 
Sbjct: 175 GEFSSIPIGAVCYRCTNKGGLGGGGPTIGAMASIPCGVCPRITQCTPDGIISPKTCAYYT 234

Query: 180 KWLD 191
           KWLD
Sbjct: 235 KWLD 238


>gb|EOY25790.1| DNA-directed RNA polymerase III subunit rpc6, putative isoform 1
           [Theobroma cacao] gi|508778535|gb|EOY25791.1|
           DNA-directed RNA polymerase III subunit rpc6, putative
           isoform 1 [Theobroma cacao]
          Length = 237

 Score =  101 bits (251), Expect = 4e-19
 Identities = 42/63 (66%), Positives = 50/63 (79%)
 Frame = +3

Query: 3   GEYHSIPIGEQCYRIANVAGVDKGPKIGAMASIPCGMCPRISQCTPDGIISPRTCVYYKK 182
           GE+ SIP+G+ CY+     G    PK+G MASIPCG+CP+IS CTPDGIISP+TCVYYKK
Sbjct: 174 GEFASIPVGKVCYKCIGKRGYGGEPKVGTMASIPCGVCPQISHCTPDGIISPKTCVYYKK 233

Query: 183 WLD 191
           WLD
Sbjct: 234 WLD 236


>ref|XP_002297621.2| hypothetical protein POPTR_0001s04090g [Populus trichocarpa]
           gi|550346475|gb|EEE82426.2| hypothetical protein
           POPTR_0001s04090g [Populus trichocarpa]
          Length = 291

 Score = 99.4 bits (246), Expect = 1e-18
 Identities = 42/63 (66%), Positives = 50/63 (79%)
 Frame = +3

Query: 3   GEYHSIPIGEQCYRIANVAGVDKGPKIGAMASIPCGMCPRISQCTPDGIISPRTCVYYKK 182
           GE+ SIP G+ CYR  +   +   PK GA+ASIPCG+CPRIS CTPDGIISP+TCVYY+K
Sbjct: 228 GEFASIPFGKVCYRYISKGALGGEPKAGALASIPCGVCPRISHCTPDGIISPKTCVYYQK 287

Query: 183 WLD 191
           WLD
Sbjct: 288 WLD 290


>ref|XP_002509507.1| DNA-directed RNA polymerase III subunit F, putative [Ricinus
           communis] gi|223549406|gb|EEF50894.1| DNA-directed RNA
           polymerase III subunit F, putative [Ricinus communis]
          Length = 236

 Score = 97.8 bits (242), Expect = 4e-18
 Identities = 42/62 (67%), Positives = 48/62 (77%)
 Frame = +3

Query: 6   EYHSIPIGEQCYRIANVAGVDKGPKIGAMASIPCGMCPRISQCTPDGIISPRTCVYYKKW 185
           E+  IPIG+ CY+          P+IGAMASIPCG+CPRISQCTPDGIISP+TCVYY KW
Sbjct: 174 EFSFIPIGKVCYKCVGKGSTAGEPRIGAMASIPCGVCPRISQCTPDGIISPQTCVYYSKW 233

Query: 186 LD 191
           LD
Sbjct: 234 LD 235


>gb|ESW11339.1| hypothetical protein PHAVU_008G021700g [Phaseolus vulgaris]
          Length = 239

 Score = 95.1 bits (235), Expect = 3e-17
 Identities = 41/63 (65%), Positives = 49/63 (77%)
 Frame = +3

Query: 3   GEYHSIPIGEQCYRIANVAGVDKGPKIGAMASIPCGMCPRISQCTPDGIISPRTCVYYKK 182
           G++ S+P+G  CYR  +  G     K GAMASIPCG+CPRI+ CTPDGIISPRTCVYY+K
Sbjct: 176 GDFSSVPVGRICYRCKSKGGNRGEQKPGAMASIPCGVCPRINFCTPDGIISPRTCVYYQK 235

Query: 183 WLD 191
           WLD
Sbjct: 236 WLD 238


>ref|XP_003551792.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
           [Glycine max]
          Length = 239

 Score = 95.1 bits (235), Expect = 3e-17
 Identities = 41/63 (65%), Positives = 49/63 (77%)
 Frame = +3

Query: 3   GEYHSIPIGEQCYRIANVAGVDKGPKIGAMASIPCGMCPRISQCTPDGIISPRTCVYYKK 182
           G++ S+P+G  CYR  +  G     K GAMASIPCG+CPRI+ CTPDGIISPRTCVYY+K
Sbjct: 176 GDFSSVPVGRICYRCKSKGGNRGEQKPGAMASIPCGVCPRINFCTPDGIISPRTCVYYQK 235

Query: 183 WLD 191
           WLD
Sbjct: 236 WLD 238


>gb|EXB67305.1| DNA-directed RNA polymerase III subunit RPC6 [Morus notabilis]
          Length = 238

 Score = 94.4 bits (233), Expect = 5e-17
 Identities = 41/63 (65%), Positives = 50/63 (79%)
 Frame = +3

Query: 3   GEYHSIPIGEQCYRIANVAGVDKGPKIGAMASIPCGMCPRISQCTPDGIISPRTCVYYKK 182
           GE+ SIP+G+ CY+  +  G    PKIGAM+SIPCG+CPRIS CTPDGIISP+TC YY +
Sbjct: 176 GEFDSIPVGKVCYKSTS-KGSRGDPKIGAMSSIPCGVCPRISDCTPDGIISPKTCKYYSQ 234

Query: 183 WLD 191
           WLD
Sbjct: 235 WLD 237


>ref|XP_004148278.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
           [Cucumis sativus] gi|449506569|ref|XP_004162785.1|
           PREDICTED: DNA-directed RNA polymerase III subunit
           RPC6-like [Cucumis sativus]
          Length = 243

 Score = 94.4 bits (233), Expect = 5e-17
 Identities = 43/64 (67%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
 Frame = +3

Query: 3   GEYHSIPIGEQCYRIANVAGVDKG-PKIGAMASIPCGMCPRISQCTPDGIISPRTCVYYK 179
           GE+  IPIG+ CY+     G  KG PK GAMASIPCG+CPRI+ CTP+GIISP TCVYY 
Sbjct: 179 GEFEFIPIGKICYKYCTQGGGLKGEPKTGAMASIPCGVCPRITYCTPNGIISPATCVYYT 238

Query: 180 KWLD 191
           KWLD
Sbjct: 239 KWLD 242


>ref|XP_003529842.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
           [Glycine max]
          Length = 229

 Score = 93.6 bits (231), Expect = 8e-17
 Identities = 39/63 (61%), Positives = 49/63 (77%)
 Frame = +3

Query: 3   GEYHSIPIGEQCYRIANVAGVDKGPKIGAMASIPCGMCPRISQCTPDGIISPRTCVYYKK 182
           G++ S+P+GE CYR+     V K   +GAMASIPCG+CPRI+ CTPDG+ISP TC YY+K
Sbjct: 171 GDFESVPVGEVCYRL-----VKKAAGVGAMASIPCGVCPRINSCTPDGVISPTTCQYYQK 225

Query: 183 WLD 191
           WLD
Sbjct: 226 WLD 228


>dbj|BAJ53222.1| JHL06P13.1 [Jatropha curcas]
          Length = 235

 Score = 92.8 bits (229), Expect = 1e-16
 Identities = 41/63 (65%), Positives = 49/63 (77%)
 Frame = +3

Query: 3   GEYHSIPIGEQCYRIANVAGVDKGPKIGAMASIPCGMCPRISQCTPDGIISPRTCVYYKK 182
           GE+ SIP+G+ CY+     G    PKIGAMASIPCG+CPRI  CTP+GIISP+TCVYY K
Sbjct: 173 GEFASIPVGKVCYKSIG-KGSSGDPKIGAMASIPCGVCPRIKHCTPNGIISPQTCVYYGK 231

Query: 183 WLD 191
           WL+
Sbjct: 232 WLE 234


>ref|XP_006475959.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
           isoform X2 [Citrus sinensis]
          Length = 234

 Score = 90.9 bits (224), Expect = 5e-16
 Identities = 36/63 (57%), Positives = 49/63 (77%)
 Frame = +3

Query: 3   GEYHSIPIGEQCYRIANVAGVDKGPKIGAMASIPCGMCPRISQCTPDGIISPRTCVYYKK 182
           GE+ +IP+G+ CY+  +  G    PK G+ AS+PCG+CP+I+ CTPDG+ISP+TCVYY K
Sbjct: 171 GEFTNIPVGKVCYKNVSKGGGGGEPKTGSSASVPCGVCPQINFCTPDGVISPKTCVYYTK 230

Query: 183 WLD 191
           WLD
Sbjct: 231 WLD 233


>ref|XP_006475958.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
           isoform X1 [Citrus sinensis]
          Length = 252

 Score = 90.9 bits (224), Expect = 5e-16
 Identities = 36/63 (57%), Positives = 49/63 (77%)
 Frame = +3

Query: 3   GEYHSIPIGEQCYRIANVAGVDKGPKIGAMASIPCGMCPRISQCTPDGIISPRTCVYYKK 182
           GE+ +IP+G+ CY+  +  G    PK G+ AS+PCG+CP+I+ CTPDG+ISP+TCVYY K
Sbjct: 189 GEFTNIPVGKVCYKNVSKGGGGGEPKTGSSASVPCGVCPQINFCTPDGVISPKTCVYYTK 248

Query: 183 WLD 191
           WLD
Sbjct: 249 WLD 251