BLASTX nr result

ID: Catharanthus23_contig00011976 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00011976
         (952 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632368.1| PREDICTED: CLAVATA3/ESR (CLE)-related protei...    64   6e-08
gb|AFK49423.1| unknown [Lotus japonicus]                               59   3e-06

>ref|XP_003632368.1| PREDICTED: CLAVATA3/ESR (CLE)-related protein TDIF-like [Vitis
           vinifera] gi|297744332|emb|CBI37302.3| unnamed protein
           product [Vitis vinifera]
          Length = 128

 Score = 64.3 bits (155), Expect = 6e-08
 Identities = 47/131 (35%), Positives = 58/131 (44%), Gaps = 13/131 (9%)
 Frame = +3

Query: 168 MDIDLLWSIGGWFLINLDCMATXXXXXXXXXXXXXXXXPNXXXXXXXXXXXXXXVHSSPA 347
           MDIDLLW++GGWFL+  DCMA                                 VH +  
Sbjct: 1   MDIDLLWALGGWFLVP-DCMAAFRTTTISETSTKSHPF---LLFLALLFILLILVHPAHQ 56

Query: 348 ADPSMPSISSKFSTQNTLPIPDST---MMNLHHKRNRQKSR----------RSEFEAGEH 488
           + PS    S+   +Q  L   DS+    +NLH K+    S           R EF+AG H
Sbjct: 57  SRPSAMDSSNITPSQRLLLSSDSSPTSTVNLHPKQTHASSSPSSSSSAASSRREFKAGAH 116

Query: 489 EVPSGPNPISN 521
           EVPSGPNPISN
Sbjct: 117 EVPSGPNPISN 127


>gb|AFK49423.1| unknown [Lotus japonicus]
          Length = 117

 Score = 58.9 bits (141), Expect = 3e-06
 Identities = 42/122 (34%), Positives = 54/122 (44%), Gaps = 4/122 (3%)
 Frame = +3

Query: 168 MDIDLLWSIGGWFLINLDCMATXXXXXXXXXXXXXXXXPNXXXXXXXXXXXXXXVHSSPA 347
           MDI+ LWS+GGWFL++  CMA                 P               +H S  
Sbjct: 1   MDIEPLWSLGGWFLLST-CMAQPKTSSSPISETFSKS-PTFLHFLTLFFILLLLIHLSYQ 58

Query: 348 ADPSMPSISSKFSTQNTLPIPDSTMMNLHHKRNRQKSRRS----EFEAGEHEVPSGPNPI 515
            +PS    S+K S   T     +T ++    +N Q S +     EF A  HEVPSGPNPI
Sbjct: 59  PNPSTAMASAKSSESTT----STTNLHPQKTKNSQSSSKDDAGREFGADAHEVPSGPNPI 114

Query: 516 SN 521
           SN
Sbjct: 115 SN 116


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