BLASTX nr result
ID: Catharanthus23_contig00011971
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00011971
(654 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOX94376.1| ATP citrate lyase (ACL) family protein [Theobroma... 88 3e-15
ref|NP_001234293.1| succinyl-CoA ligase [ADP-forming] subunit be... 84 3e-14
ref|XP_004289972.1| PREDICTED: succinyl-CoA ligase [ADP-forming]... 82 5e-14
ref|XP_002884202.1| hypothetical protein ARALYDRAFT_480870 [Arab... 84 5e-14
ref|XP_004140571.1| PREDICTED: succinyl-CoA ligase [ADP-forming]... 82 6e-14
ref|XP_006408960.1| hypothetical protein EUTSA_v10001996mg [Eutr... 83 6e-14
ref|XP_006352732.1| PREDICTED: succinyl-CoA ligase [ADP-forming]... 83 8e-14
gb|ABC01911.1| succinyl CoA ligase beta subunit-like protein [So... 83 8e-14
ref|XP_006297759.1| hypothetical protein CARUB_v10013793mg [Caps... 82 1e-13
ref|XP_002529830.1| succinyl-CoA synthetase beta chain, putative... 82 2e-13
ref|NP_179632.1| Succinyl-CoA ligase [GDP-forming] subunit beta ... 81 2e-13
gb|AAM65138.1| succinyl-CoA ligase beta subunit [Arabidopsis tha... 81 2e-13
gb|EMJ01046.1| hypothetical protein PRUPE_ppa006210mg [Prunus pe... 80 4e-13
gb|ABQ10186.1| succinyl-CoA ligase beta subunit [Caragana jubata] 79 5e-13
ref|XP_004953133.1| PREDICTED: succinyl-CoA ligase [ADP-forming]... 78 6e-13
ref|XP_002320625.1| Succinyl-CoA ligase beta-chain family protei... 79 9e-13
ref|XP_003542431.1| PREDICTED: succinyl-CoA ligase [ADP-forming]... 77 1e-12
ref|XP_003537078.1| PREDICTED: succinyl-CoA ligase [ADP-forming]... 77 1e-12
ref|XP_003575382.1| PREDICTED: succinyl-CoA ligase [ADP-forming]... 77 1e-12
gb|ACU17170.1| unknown [Glycine max] 77 1e-12
>gb|EOX94376.1| ATP citrate lyase (ACL) family protein [Theobroma cacao]
Length = 421
Score = 87.8 bits (216), Expect = 3e-15
Identities = 49/71 (69%), Positives = 56/71 (78%), Gaps = 2/71 (2%)
Frame = -2
Query: 494 ALSVSGKWQQQ*LYRLNIHEYQETI*GS*LMSKYGINFPKGVAVSSVQEAKEAVRAAFPN 315
+LSV+GKWQQQ L RLNIHEYQ G+ LMSKYGIN PKGVAVSSV E K+AV+ AFPN
Sbjct: 12 SLSVAGKWQQQQLRRLNIHEYQ----GAELMSKYGINVPKGVAVSSVDEVKQAVKDAFPN 67
Query: 314 KSE--VKSNTL 288
++E VKS L
Sbjct: 68 QNELVVKSQIL 78
>ref|NP_001234293.1| succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial
[Solanum lycopersicum]
gi|75147005|sp|Q84LB6.1|SUCB_SOLLC RecName:
Full=Succinyl-CoA ligase [ADP-forming] subunit beta,
mitochondrial; Short=SlSCoALbeta; Flags: Precursor
gi|27803873|gb|AAO22150.1| succinyl CoA ligase beta
subunit [Solanum lycopersicum]
Length = 417
Score = 84.3 bits (207), Expect = 3e-14
Identities = 43/64 (67%), Positives = 52/64 (81%)
Frame = -2
Query: 494 ALSVSGKWQQQ*LYRLNIHEYQETI*GS*LMSKYGINFPKGVAVSSVQEAKEAVRAAFPN 315
+LSV+GKWQQQ L RLNIHEYQ G+ LMSKYGIN PKGVAV+S+ E K+A++ FPN
Sbjct: 9 SLSVAGKWQQQQLRRLNIHEYQ----GAELMSKYGINVPKGVAVASLDEVKKAIQDVFPN 64
Query: 314 KSEV 303
+SEV
Sbjct: 65 QSEV 68
>ref|XP_004289972.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 422
Score = 82.0 bits (201), Expect(2) = 5e-14
Identities = 44/71 (61%), Positives = 52/71 (73%), Gaps = 2/71 (2%)
Frame = -2
Query: 494 ALSVSGKWQQQ*LYRLNIHEYQETI*GS*LMSKYGINFPKGVAVSSVQEAKEAVRAAFPN 315
+LS +GKWQQQ L RLNIHEYQ G+ LMSKYG+N PKGVAV SV E K+ + + FPN
Sbjct: 13 SLSFAGKWQQQQLRRLNIHEYQ----GAELMSKYGVNVPKGVAVGSVDEVKKVIESTFPN 68
Query: 314 KSE--VKSNTL 288
+SE VKS L
Sbjct: 69 QSELVVKSQVL 79
Score = 21.9 bits (45), Expect(2) = 5e-14
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -1
Query: 528 MV*GLLGKLASRSLRF 481
MV GLL +L+SRSL F
Sbjct: 1 MVRGLLKQLSSRSLSF 16
>ref|XP_002884202.1| hypothetical protein ARALYDRAFT_480870 [Arabidopsis lyrata subsp.
lyrata] gi|297330042|gb|EFH60461.1| hypothetical protein
ARALYDRAFT_480870 [Arabidopsis lyrata subsp. lyrata]
Length = 421
Score = 83.6 bits (205), Expect = 5e-14
Identities = 44/71 (61%), Positives = 54/71 (76%), Gaps = 2/71 (2%)
Frame = -2
Query: 494 ALSVSGKWQQQ*LYRLNIHEYQETI*GS*LMSKYGINFPKGVAVSSVQEAKEAVRAAFPN 315
+LS+SGKWQQQ L RLNIHEYQ G+ LM KYG+N PKGVA SS++E K+A++ FPN
Sbjct: 12 SLSISGKWQQQQLRRLNIHEYQ----GAELMGKYGVNVPKGVAASSLEEVKKAIQEVFPN 67
Query: 314 KSE--VKSNTL 288
+SE VKS L
Sbjct: 68 ESELVVKSQIL 78
>ref|XP_004140571.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
mitochondrial-like [Cucumis sativus]
gi|449487361|ref|XP_004157588.1| PREDICTED: succinyl-CoA
ligase [ADP-forming] subunit beta, mitochondrial-like
[Cucumis sativus]
Length = 421
Score = 81.6 bits (200), Expect(2) = 6e-14
Identities = 46/71 (64%), Positives = 53/71 (74%), Gaps = 2/71 (2%)
Frame = -2
Query: 494 ALSVSGKWQQQ*LYRLNIHEYQETI*GS*LMSKYGINFPKGVAVSSVQEAKEAVRAAFPN 315
+LSV+GKWQ Q L RLNIHEYQ G+ LMSKYGIN PKG+AVSSV E K A++AAFP+
Sbjct: 13 SLSVAGKWQHQQLRRLNIHEYQ----GAELMSKYGINVPKGLAVSSVDEVKSAMQAAFPD 68
Query: 314 KSE--VKSNTL 288
E VKS L
Sbjct: 69 AKELVVKSQIL 79
Score = 21.9 bits (45), Expect(2) = 6e-14
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -1
Query: 528 MV*GLLGKLASRSL 487
MV GLL KL SRSL
Sbjct: 1 MVRGLLNKLVSRSL 14
>ref|XP_006408960.1| hypothetical protein EUTSA_v10001996mg [Eutrema salsugineum]
gi|557110116|gb|ESQ50413.1| hypothetical protein
EUTSA_v10001996mg [Eutrema salsugineum]
Length = 420
Score = 83.2 bits (204), Expect = 6e-14
Identities = 45/71 (63%), Positives = 54/71 (76%), Gaps = 2/71 (2%)
Frame = -2
Query: 494 ALSVSGKWQQQ*LYRLNIHEYQETI*GS*LMSKYGINFPKGVAVSSVQEAKEAVRAAFPN 315
+LSV+GKWQQQ L RLNIHEYQ G+ LM KYG+N PKGVAVSS+ E K+A++ FPN
Sbjct: 12 SLSVAGKWQQQQLRRLNIHEYQ----GAELMGKYGVNVPKGVAVSSLDEVKKAIQDVFPN 67
Query: 314 KSE--VKSNTL 288
+SE VKS L
Sbjct: 68 ESELVVKSQIL 78
>ref|XP_006352732.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
mitochondrial isoform X1 [Solanum tuberosum]
gi|565372299|ref|XP_006352733.1| PREDICTED: succinyl-CoA
ligase [ADP-forming] subunit beta, mitochondrial isoform
X2 [Solanum tuberosum]
Length = 421
Score = 82.8 bits (203), Expect = 8e-14
Identities = 42/64 (65%), Positives = 51/64 (79%)
Frame = -2
Query: 494 ALSVSGKWQQQ*LYRLNIHEYQETI*GS*LMSKYGINFPKGVAVSSVQEAKEAVRAAFPN 315
+LSV+GKWQQQ L RLNIHEYQ G+ LM KYGIN PKGVAV+S+ E K+A++ FPN
Sbjct: 13 SLSVAGKWQQQQLRRLNIHEYQ----GAELMGKYGINVPKGVAVASLDEVKKAIQDVFPN 68
Query: 314 KSEV 303
+SEV
Sbjct: 69 QSEV 72
>gb|ABC01911.1| succinyl CoA ligase beta subunit-like protein [Solanum tuberosum]
Length = 421
Score = 82.8 bits (203), Expect = 8e-14
Identities = 42/64 (65%), Positives = 51/64 (79%)
Frame = -2
Query: 494 ALSVSGKWQQQ*LYRLNIHEYQETI*GS*LMSKYGINFPKGVAVSSVQEAKEAVRAAFPN 315
+LSV+GKWQQQ L RLNIHEYQ G+ LM KYGIN PKGVAV+S+ E K+A++ FPN
Sbjct: 13 SLSVAGKWQQQQLRRLNIHEYQ----GAELMGKYGINVPKGVAVASLDEVKKAIQDVFPN 68
Query: 314 KSEV 303
+SEV
Sbjct: 69 QSEV 72
>ref|XP_006297759.1| hypothetical protein CARUB_v10013793mg [Capsella rubella]
gi|482566468|gb|EOA30657.1| hypothetical protein
CARUB_v10013793mg [Capsella rubella]
Length = 421
Score = 82.4 bits (202), Expect = 1e-13
Identities = 45/71 (63%), Positives = 52/71 (73%), Gaps = 2/71 (2%)
Frame = -2
Query: 494 ALSVSGKWQQQ*LYRLNIHEYQETI*GS*LMSKYGINFPKGVAVSSVQEAKEAVRAAFPN 315
+LSVSGKWQQQ L RLNIHEYQ G+ LM KYG+N PKGVA S++E K+AV FPN
Sbjct: 12 SLSVSGKWQQQQLRRLNIHEYQ----GAELMGKYGVNVPKGVAAGSLEEVKKAVHEVFPN 67
Query: 314 KSE--VKSNTL 288
+SE VKS L
Sbjct: 68 ESELVVKSQIL 78
>ref|XP_002529830.1| succinyl-CoA synthetase beta chain, putative [Ricinus communis]
gi|223530658|gb|EEF32531.1| succinyl-CoA synthetase beta
chain, putative [Ricinus communis]
Length = 425
Score = 81.6 bits (200), Expect = 2e-13
Identities = 44/71 (61%), Positives = 54/71 (76%), Gaps = 2/71 (2%)
Frame = -2
Query: 494 ALSVSGKWQQQ*LYRLNIHEYQETI*GS*LMSKYGINFPKGVAVSSVQEAKEAVRAAFPN 315
+LSV+GKWQQQ L RLNIHEYQ G+ LMSKYGIN PKGVA +S+ E ++A++ FP+
Sbjct: 12 SLSVAGKWQQQQLRRLNIHEYQ----GADLMSKYGINVPKGVAAASIDEVRKAIQDVFPD 67
Query: 314 KSE--VKSNTL 288
KSE VKS L
Sbjct: 68 KSELVVKSQIL 78
>ref|NP_179632.1| Succinyl-CoA ligase [GDP-forming] subunit beta [Arabidopsis
thaliana] gi|21264030|sp|O82662.1|SUCB_ARATH RecName:
Full=Succinyl-CoA ligase [ADP-forming] subunit beta,
mitochondrial; AltName: Full=Succinyl-CoA synthetase
beta chain; Short=SCS-beta; Flags: Precursor
gi|3660469|emb|CAA05024.1| succinyl-CoA-ligase beta
subunit [Arabidopsis thaliana]
gi|20197853|gb|AAM15283.1| succinyl-CoA ligase beta
subunit [Arabidopsis thaliana]
gi|20466482|gb|AAM20558.1| succinyl-CoA ligase beta
subunit [Arabidopsis thaliana]
gi|22136422|gb|AAM91289.1| succinyl-CoA ligase beta
subunit [Arabidopsis thaliana]
gi|330251911|gb|AEC07005.1| Succinyl-CoA ligase
[GDP-forming] subunit beta [Arabidopsis thaliana]
Length = 421
Score = 81.3 bits (199), Expect = 2e-13
Identities = 43/71 (60%), Positives = 53/71 (74%), Gaps = 2/71 (2%)
Frame = -2
Query: 494 ALSVSGKWQQQ*LYRLNIHEYQETI*GS*LMSKYGINFPKGVAVSSVQEAKEAVRAAFPN 315
+LS+SGKWQ Q L RLNIHEYQ G+ LM KYG+N PKGVA SS++E K+A++ FPN
Sbjct: 12 SLSISGKWQNQQLRRLNIHEYQ----GAELMGKYGVNVPKGVAASSLEEVKKAIQDVFPN 67
Query: 314 KSE--VKSNTL 288
+SE VKS L
Sbjct: 68 ESELVVKSQIL 78
>gb|AAM65138.1| succinyl-CoA ligase beta subunit [Arabidopsis thaliana]
Length = 421
Score = 81.3 bits (199), Expect = 2e-13
Identities = 43/71 (60%), Positives = 53/71 (74%), Gaps = 2/71 (2%)
Frame = -2
Query: 494 ALSVSGKWQQQ*LYRLNIHEYQETI*GS*LMSKYGINFPKGVAVSSVQEAKEAVRAAFPN 315
+LS+SGKWQ Q L RLNIHEYQ G+ LM KYG+N PKGVA SS++E K+A++ FPN
Sbjct: 12 SLSISGKWQNQQLRRLNIHEYQ----GAELMGKYGVNVPKGVAASSLEEVKKAIQDVFPN 67
Query: 314 KSE--VKSNTL 288
+SE VKS L
Sbjct: 68 ESELVVKSQIL 78
>gb|EMJ01046.1| hypothetical protein PRUPE_ppa006210mg [Prunus persica]
Length = 422
Score = 80.5 bits (197), Expect = 4e-13
Identities = 43/71 (60%), Positives = 52/71 (73%), Gaps = 2/71 (2%)
Frame = -2
Query: 494 ALSVSGKWQQQ*LYRLNIHEYQETI*GS*LMSKYGINFPKGVAVSSVQEAKEAVRAAFPN 315
+LS++GKWQQQ L RLNIHEYQ G+ LMSKYG+N PKG AV+SV E K A++ FP
Sbjct: 13 SLSIAGKWQQQQLRRLNIHEYQ----GADLMSKYGVNVPKGAAVASVDEVKRAIQDVFPK 68
Query: 314 KSE--VKSNTL 288
+SE VKS L
Sbjct: 69 ESELVVKSQVL 79
>gb|ABQ10186.1| succinyl-CoA ligase beta subunit [Caragana jubata]
Length = 421
Score = 78.6 bits (192), Expect(2) = 5e-13
Identities = 38/64 (59%), Positives = 51/64 (79%)
Frame = -2
Query: 494 ALSVSGKWQQQ*LYRLNIHEYQETI*GS*LMSKYGINFPKGVAVSSVQEAKEAVRAAFPN 315
+LSV+GKWQ Q L RLNIHEYQ G+ LMSKYG+N P+GVAVSS++E ++A++ F N
Sbjct: 13 SLSVAGKWQNQQLRRLNIHEYQ----GAELMSKYGVNVPRGVAVSSIEEVRKAIKDVFAN 68
Query: 314 KSEV 303
++EV
Sbjct: 69 QNEV 72
Score = 21.9 bits (45), Expect(2) = 5e-13
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -1
Query: 528 MV*GLLGKLASRSL 487
MV GLL KL SRSL
Sbjct: 1 MVRGLLNKLVSRSL 14
>ref|XP_004953133.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
mitochondrial-like [Setaria italica]
Length = 422
Score = 77.8 bits (190), Expect(2) = 6e-13
Identities = 39/64 (60%), Positives = 48/64 (75%)
Frame = -2
Query: 494 ALSVSGKWQQQ*LYRLNIHEYQETI*GS*LMSKYGINFPKGVAVSSVQEAKEAVRAAFPN 315
ALSV+G+WQ Q L RLNIHEYQ G+ LM KYGIN P+G AV SVQE K+A++ AFP
Sbjct: 13 ALSVAGRWQHQQLRRLNIHEYQ----GAELMGKYGINVPRGAAVGSVQELKDALKNAFPE 68
Query: 314 KSEV 303
+ E+
Sbjct: 69 EKEI 72
Score = 22.3 bits (46), Expect(2) = 6e-13
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -1
Query: 528 MV*GLLGKLASRSL 487
MV G LGKLASR+L
Sbjct: 1 MVRGSLGKLASRAL 14
>ref|XP_002320625.1| Succinyl-CoA ligase beta-chain family protein [Populus trichocarpa]
gi|222861398|gb|EEE98940.1| Succinyl-CoA ligase
beta-chain family protein [Populus trichocarpa]
Length = 421
Score = 79.3 bits (194), Expect = 9e-13
Identities = 43/71 (60%), Positives = 52/71 (73%), Gaps = 2/71 (2%)
Frame = -2
Query: 494 ALSVSGKWQQQ*LYRLNIHEYQETI*GS*LMSKYGINFPKGVAVSSVQEAKEAVRAAFPN 315
+LSV+GKWQ Q L RLNIHEYQ G+ LM KYG+N PKGVAVSS+ E K+A++ FP
Sbjct: 12 SLSVAGKWQHQQLRRLNIHEYQ----GAELMGKYGVNVPKGVAVSSLDEVKKAIQDVFPG 67
Query: 314 KSE--VKSNTL 288
+SE VKS L
Sbjct: 68 ESELVVKSQVL 78
>ref|XP_003542431.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
mitochondrial-like [Glycine max]
Length = 422
Score = 77.4 bits (189), Expect(2) = 1e-12
Identities = 41/71 (57%), Positives = 54/71 (76%), Gaps = 2/71 (2%)
Frame = -2
Query: 494 ALSVSGKWQQQ*LYRLNIHEYQETI*GS*LMSKYGINFPKGVAVSSVQEAKEAVRAAFPN 315
+LSV+GKWQ L RLNIHEYQ G+ LMSK+G+N P+GVAVSSV+E ++A++ FPN
Sbjct: 13 SLSVAGKWQHNQLRRLNIHEYQ----GAELMSKHGVNVPRGVAVSSVEEVRKAIKDLFPN 68
Query: 314 KSE--VKSNTL 288
++E VKS L
Sbjct: 69 ENELVVKSQIL 79
Score = 21.9 bits (45), Expect(2) = 1e-12
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -1
Query: 528 MV*GLLGKLASRSL 487
MV GLL KL SRSL
Sbjct: 1 MVRGLLNKLVSRSL 14
>ref|XP_003537078.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
mitochondrial [Glycine max]
Length = 422
Score = 77.4 bits (189), Expect(2) = 1e-12
Identities = 41/71 (57%), Positives = 54/71 (76%), Gaps = 2/71 (2%)
Frame = -2
Query: 494 ALSVSGKWQQQ*LYRLNIHEYQETI*GS*LMSKYGINFPKGVAVSSVQEAKEAVRAAFPN 315
+LSV+GKWQ L RLNIHEYQ G+ LMSK+G+N P+GVAVSSV+EA++ ++ FPN
Sbjct: 13 SLSVAGKWQHNQLRRLNIHEYQ----GAELMSKHGVNVPRGVAVSSVEEARKVIKDLFPN 68
Query: 314 KSE--VKSNTL 288
++E VKS L
Sbjct: 69 ENELVVKSQIL 79
Score = 21.9 bits (45), Expect(2) = 1e-12
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -1
Query: 528 MV*GLLGKLASRSL 487
MV GLL KL SRSL
Sbjct: 1 MVRGLLNKLVSRSL 14
>ref|XP_003575382.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
mitochondrial-like [Brachypodium distachyon]
Length = 422
Score = 77.0 bits (188), Expect(2) = 1e-12
Identities = 39/64 (60%), Positives = 45/64 (70%)
Frame = -2
Query: 494 ALSVSGKWQQQ*LYRLNIHEYQETI*GS*LMSKYGINFPKGVAVSSVQEAKEAVRAAFPN 315
ALSV+GKWQ Q L RLNIHEYQ G+ LM KYGIN PKG V SVQE KE + FP+
Sbjct: 13 ALSVAGKWQHQQLRRLNIHEYQ----GAELMGKYGINVPKGAVVGSVQEVKEVLNKVFPS 68
Query: 314 KSEV 303
+ E+
Sbjct: 69 EKEI 72
Score = 22.3 bits (46), Expect(2) = 1e-12
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -1
Query: 528 MV*GLLGKLASRSL 487
MV G LGKLASR+L
Sbjct: 1 MVRGSLGKLASRAL 14
>gb|ACU17170.1| unknown [Glycine max]
Length = 172
Score = 77.4 bits (189), Expect(2) = 1e-12
Identities = 41/71 (57%), Positives = 54/71 (76%), Gaps = 2/71 (2%)
Frame = -2
Query: 494 ALSVSGKWQQQ*LYRLNIHEYQETI*GS*LMSKYGINFPKGVAVSSVQEAKEAVRAAFPN 315
+LSV+GKWQ L RLNIHEYQ G+ LMSK+G+N P+GVAVSSV+EA++ ++ FPN
Sbjct: 13 SLSVAGKWQHNQLRRLNIHEYQ----GAELMSKHGVNVPRGVAVSSVEEARKVIKDLFPN 68
Query: 314 KSE--VKSNTL 288
++E VKS L
Sbjct: 69 ENELVVKSQIL 79
Score = 21.9 bits (45), Expect(2) = 1e-12
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -1
Query: 528 MV*GLLGKLASRSL 487
MV GLL KL SRSL
Sbjct: 1 MVRGLLNKLVSRSL 14