BLASTX nr result
ID: Catharanthus23_contig00011868
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00011868
(492 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AEI98616.1| hypothetical protein 111O18.3 [Coffea canephora] 100 4e-33
emb|CBI17549.3| unnamed protein product [Vitis vinifera] 73 1e-20
ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III s... 73 1e-20
gb|ABU45193.1| unknown [Petunia integrifolia subsp. inflata] 64 5e-15
ref|XP_006355441.1| PREDICTED: DNA-directed RNA polymerase III s... 61 5e-12
ref|XP_006355442.1| PREDICTED: DNA-directed RNA polymerase III s... 61 5e-12
ref|XP_006366082.1| PREDICTED: uncharacterized protein LOC102595... 61 5e-12
ref|XP_006366085.1| PREDICTED: uncharacterized protein LOC102595... 61 5e-12
gb|EPS66723.1| hypothetical protein M569_08053 [Genlisea aurea] 49 6e-12
ref|XP_006590438.1| PREDICTED: DNA-directed RNA polymerase III s... 56 1e-11
gb|ABU45208.1| unknown [Solanum bulbocastanum] 55 1e-11
gb|ABU45174.1| unknown [Solanum melongena] 55 2e-11
gb|EOX91150.1| Transcription regulators,zinc ion binding, putati... 55 5e-11
gb|EOX91148.1| SIN-like family protein, putative isoform 1 [Theo... 55 5e-11
ref|XP_004245771.1| PREDICTED: DNA-directed RNA polymerase III s... 57 5e-11
ref|XP_004232385.1| PREDICTED: uncharacterized protein LOC101252... 55 5e-11
gb|EOX91149.1| Transcription regulators,zinc ion binding, putati... 55 5e-11
gb|ESW29064.1| hypothetical protein PHAVU_002G0404001g, partial ... 52 4e-10
gb|AAG01125.1|AF273333_10 BAC19.10 [Solanum lycopersicum] 50 8e-10
ref|XP_006355444.1| PREDICTED: DNA-directed RNA polymerase III s... 52 2e-09
>gb|AEI98616.1| hypothetical protein 111O18.3 [Coffea canephora]
Length = 643
Score = 100 bits (249), Expect(2) = 4e-33
Identities = 54/102 (52%), Positives = 69/102 (67%)
Frame = -3
Query: 307 PGISFMKLHPNIVKXXXXXXXXXEKQITDFIFRGRDKPALKSSSKSVTTNNPAALKSSSK 128
P ++F+KL+P IV+ EK IT+ IF +++PA K+SS+ +TTNNPA KS SK
Sbjct: 455 PDMTFIKLNPKIVREQEQTWERLEKLITEKIFGDKNRPATKNSSRPLTTNNPATSKSLSK 514
Query: 127 QTSKPSNGGPSRMPMSDETCEALPKVLQKIFQNHNVCSFQQI 2
S N G R PMS+ET EALPK LQK+FQ+H VC FQQI
Sbjct: 515 HASNSLNAGVPRRPMSEETREALPKALQKLFQSHKVC-FQQI 555
Score = 66.6 bits (161), Expect(2) = 4e-33
Identities = 35/67 (52%), Positives = 51/67 (76%), Gaps = 2/67 (2%)
Frame = -2
Query: 491 VPKGSLLNA--QGMEELARDYVLLLLSKSPLVHNSRLPPQSELVKAVRDVLNVLASPRRT 318
+PK SLL QG++ LARDYVLLL S++P+++NS+LP Q +L +A+RDVL+ +A R +
Sbjct: 386 IPKSSLLYGKDQGIDALARDYVLLLFSRTPIINNSQLPQQQKLNRAMRDVLDTVAFERVS 445
Query: 317 LDDSWYF 297
L+D W F
Sbjct: 446 LND-WKF 451
>emb|CBI17549.3| unnamed protein product [Vitis vinifera]
Length = 688
Score = 72.8 bits (177), Expect(2) = 1e-20
Identities = 47/102 (46%), Positives = 57/102 (55%), Gaps = 2/102 (1%)
Frame = -3
Query: 301 ISFMKLHPNIVKXXXXXXXXXEKQITDFIFRG-RDKPALKSSSKSVTTNNPAALKSSSKQ 125
+SFMKLHP+IV+ EKQITD I G R P K+S K N S
Sbjct: 460 VSFMKLHPDIVREQRRVWESLEKQITDIIHGGGRRGPVTKNSGKPSIANKTGTSTKSDGA 519
Query: 124 TSKPSNGGP-SRMPMSDETCEALPKVLQKIFQNHNVCSFQQI 2
T + +NG P R MS ET EALPK L+++F+ H VCSFQ I
Sbjct: 520 T-RATNGTPVRRTAMSAETREALPKALEEVFRLHKVCSFQLI 560
Score = 52.8 bits (125), Expect(2) = 1e-20
Identities = 31/67 (46%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
Frame = -2
Query: 491 VPKGSLL--NAQGMEELARDYVLLLLSKSPLVHNSRLPPQSELVKAVRDVLNVLASPRRT 318
VPK SLL QG+ LARDY+LLL SK PL++ S++ L KA++ L++LA R +
Sbjct: 389 VPKSSLLFPGGQGVAPLARDYILLLFSKGPLINYSQVDVPGSLNKALKGFLSILAVERPS 448
Query: 317 LDDSWYF 297
D W F
Sbjct: 449 FRD-WKF 454
>ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Vitis
vinifera]
Length = 672
Score = 72.8 bits (177), Expect(2) = 1e-20
Identities = 47/102 (46%), Positives = 57/102 (55%), Gaps = 2/102 (1%)
Frame = -3
Query: 301 ISFMKLHPNIVKXXXXXXXXXEKQITDFIFRG-RDKPALKSSSKSVTTNNPAALKSSSKQ 125
+SFMKLHP+IV+ EKQITD I G R P K+S K N S
Sbjct: 444 VSFMKLHPDIVREQRRVWESLEKQITDIIHGGGRRGPVTKNSGKPSIANKTGTSTKSDGA 503
Query: 124 TSKPSNGGP-SRMPMSDETCEALPKVLQKIFQNHNVCSFQQI 2
T + +NG P R MS ET EALPK L+++F+ H VCSFQ I
Sbjct: 504 T-RATNGTPVRRTAMSAETREALPKALEEVFRLHKVCSFQLI 544
Score = 52.8 bits (125), Expect(2) = 1e-20
Identities = 31/67 (46%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
Frame = -2
Query: 491 VPKGSLL--NAQGMEELARDYVLLLLSKSPLVHNSRLPPQSELVKAVRDVLNVLASPRRT 318
VPK SLL QG+ LARDY+LLL SK PL++ S++ L KA++ L++LA R +
Sbjct: 373 VPKSSLLFPGGQGVAPLARDYILLLFSKGPLINYSQVDVPGSLNKALKGFLSILAVERPS 432
Query: 317 LDDSWYF 297
D W F
Sbjct: 433 FRD-WKF 438
>gb|ABU45193.1| unknown [Petunia integrifolia subsp. inflata]
Length = 666
Score = 63.5 bits (153), Expect(2) = 5e-15
Identities = 38/102 (37%), Positives = 53/102 (51%)
Frame = -3
Query: 307 PGISFMKLHPNIVKXXXXXXXXXEKQITDFIFRGRDKPALKSSSKSVTTNNPAALKSSSK 128
P F L+ ++VK KQI + GR++P +K+ S NP+A +
Sbjct: 456 PDKEFENLYGDLVKEQQVTWERLGKQIYGLLAGGRNRPTMKNPS------NPSAGIPALP 509
Query: 127 QTSKPSNGGPSRMPMSDETCEALPKVLQKIFQNHNVCSFQQI 2
KP+ +R MS+ T EAL K LQK+F+ H VCSFQQI
Sbjct: 510 SGGKPTPRSVTRTSMSERTREALQKALQKVFRTHKVCSFQQI 551
Score = 42.7 bits (99), Expect(2) = 5e-15
Identities = 27/63 (42%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = -2
Query: 491 VPKGSLLNAQ--GMEELARDYVLLLLSKSPLVHNSRLPPQSELVKAVRDVLNVLASPRRT 318
VPK SL+ + G E LARD+VL SKSP + S + E KA L +LA R
Sbjct: 387 VPKSSLVYGRNDGHEVLARDFVLFEFSKSPFIKQSVFDRKPEFFKAATPALKLLAVERPD 446
Query: 317 LDD 309
L+D
Sbjct: 447 LND 449
>ref|XP_006355441.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like
isoform X1 [Solanum tuberosum]
Length = 669
Score = 60.8 bits (146), Expect(2) = 5e-12
Identities = 36/102 (35%), Positives = 53/102 (51%)
Frame = -3
Query: 307 PGISFMKLHPNIVKXXXXXXXXXEKQITDFIFRGRDKPALKSSSKSVTTNNPAALKSSSK 128
P F L+ ++V+ KQI D + GR++P +K+ NP A +
Sbjct: 444 PDKKFENLYGDVVREKQATWECLGKQINDVLPGGRNRPTMKNPL------NPNADIPALP 497
Query: 127 QTSKPSNGGPSRMPMSDETCEALPKVLQKIFQNHNVCSFQQI 2
KP++ R MS+E EALPK LQ++F+ + VCSFQQI
Sbjct: 498 SGDKPTSSSLLRTSMSEEIREALPKALQEVFRTYKVCSFQQI 539
Score = 35.4 bits (80), Expect(2) = 5e-12
Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = -2
Query: 491 VPKGSLLNA--QGMEELARDYVLLLLSKSPLVHNSRLPPQSELVKAVRDVLNVLASPRRT 318
VPK SL+ G+E LAR++VL +K L+ S + E +KA L LA R
Sbjct: 375 VPKSSLVYGTNSGVEVLARNFVLYEFTKGILIKKSVFGRRPEFLKAATPALKSLAVERPD 434
Query: 317 LDD 309
L+D
Sbjct: 435 LND 437
>ref|XP_006355442.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like
isoform X2 [Solanum tuberosum]
Length = 657
Score = 60.8 bits (146), Expect(2) = 5e-12
Identities = 36/102 (35%), Positives = 53/102 (51%)
Frame = -3
Query: 307 PGISFMKLHPNIVKXXXXXXXXXEKQITDFIFRGRDKPALKSSSKSVTTNNPAALKSSSK 128
P F L+ ++V+ KQI D + GR++P +K+ NP A +
Sbjct: 432 PDKKFENLYGDVVREKQATWECLGKQINDVLPGGRNRPTMKNPL------NPNADIPALP 485
Query: 127 QTSKPSNGGPSRMPMSDETCEALPKVLQKIFQNHNVCSFQQI 2
KP++ R MS+E EALPK LQ++F+ + VCSFQQI
Sbjct: 486 SGDKPTSSSLLRTSMSEEIREALPKALQEVFRTYKVCSFQQI 527
Score = 35.4 bits (80), Expect(2) = 5e-12
Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = -2
Query: 491 VPKGSLLNA--QGMEELARDYVLLLLSKSPLVHNSRLPPQSELVKAVRDVLNVLASPRRT 318
VPK SL+ G+E LAR++VL +K L+ S + E +KA L LA R
Sbjct: 363 VPKSSLVYGTNSGVEVLARNFVLYEFTKGILIKKSVFGRRPEFLKAATPALKSLAVERPD 422
Query: 317 LDD 309
L+D
Sbjct: 423 LND 425
>ref|XP_006366082.1| PREDICTED: uncharacterized protein LOC102595101 isoform X1 [Solanum
tuberosum] gi|565401166|ref|XP_006366083.1| PREDICTED:
uncharacterized protein LOC102595101 isoform X2 [Solanum
tuberosum] gi|565401168|ref|XP_006366084.1| PREDICTED:
uncharacterized protein LOC102595101 isoform X3 [Solanum
tuberosum]
Length = 426
Score = 60.8 bits (146), Expect(2) = 5e-12
Identities = 36/102 (35%), Positives = 53/102 (51%)
Frame = -3
Query: 307 PGISFMKLHPNIVKXXXXXXXXXEKQITDFIFRGRDKPALKSSSKSVTTNNPAALKSSSK 128
P F L+ ++V+ KQI D + GR++P +K+ NP A +
Sbjct: 201 PDKKFENLYGDVVREKQATWECLGKQINDVLPGGRNRPTMKNPL------NPNADIPALP 254
Query: 127 QTSKPSNGGPSRMPMSDETCEALPKVLQKIFQNHNVCSFQQI 2
KP++ R MS+E EALPK LQ++F+ + VCSFQQI
Sbjct: 255 SGDKPTSSSLLRTSMSEEIREALPKALQEVFRTYKVCSFQQI 296
Score = 35.4 bits (80), Expect(2) = 5e-12
Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = -2
Query: 491 VPKGSLLNA--QGMEELARDYVLLLLSKSPLVHNSRLPPQSELVKAVRDVLNVLASPRRT 318
VPK SL+ G+E LAR++VL +K L+ S + E +KA L LA R
Sbjct: 132 VPKSSLVYGTNSGVEVLARNFVLYEFTKGILIKKSVFGRRPEFLKAATPALKSLAVERPD 191
Query: 317 LDD 309
L+D
Sbjct: 192 LND 194
>ref|XP_006366085.1| PREDICTED: uncharacterized protein LOC102595101 isoform X4 [Solanum
tuberosum] gi|565401172|ref|XP_006366086.1| PREDICTED:
uncharacterized protein LOC102595101 isoform X5 [Solanum
tuberosum] gi|565401174|ref|XP_006366087.1| PREDICTED:
uncharacterized protein LOC102595101 isoform X6 [Solanum
tuberosum]
Length = 387
Score = 60.8 bits (146), Expect(2) = 5e-12
Identities = 36/102 (35%), Positives = 53/102 (51%)
Frame = -3
Query: 307 PGISFMKLHPNIVKXXXXXXXXXEKQITDFIFRGRDKPALKSSSKSVTTNNPAALKSSSK 128
P F L+ ++V+ KQI D + GR++P +K+ NP A +
Sbjct: 162 PDKKFENLYGDVVREKQATWECLGKQINDVLPGGRNRPTMKNPL------NPNADIPALP 215
Query: 127 QTSKPSNGGPSRMPMSDETCEALPKVLQKIFQNHNVCSFQQI 2
KP++ R MS+E EALPK LQ++F+ + VCSFQQI
Sbjct: 216 SGDKPTSSSLLRTSMSEEIREALPKALQEVFRTYKVCSFQQI 257
Score = 35.4 bits (80), Expect(2) = 5e-12
Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = -2
Query: 491 VPKGSLLNA--QGMEELARDYVLLLLSKSPLVHNSRLPPQSELVKAVRDVLNVLASPRRT 318
VPK SL+ G+E LAR++VL +K L+ S + E +KA L LA R
Sbjct: 93 VPKSSLVYGTNSGVEVLARNFVLYEFTKGILIKKSVFGRRPEFLKAATPALKSLAVERPD 152
Query: 317 LDD 309
L+D
Sbjct: 153 LND 155
>gb|EPS66723.1| hypothetical protein M569_08053 [Genlisea aurea]
Length = 599
Score = 48.9 bits (115), Expect(2) = 6e-12
Identities = 28/63 (44%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
Frame = -2
Query: 491 VPKGSLLNA--QGMEELARDYVLLLLSKSPLVHNSRLPPQSELVKAVRDVLNVLASPRRT 318
VPK SL+ G E LARDYVLLL +K+ ++N+ L Q +L A+++VL V+A R
Sbjct: 306 VPKSSLVYGTDHGNEVLARDYVLLLFTKNVCINNAELRQQPKLSGAMKEVLKVVAEERPA 365
Query: 317 LDD 309
+D
Sbjct: 366 FND 368
Score = 47.0 bits (110), Expect(2) = 6e-12
Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 1/103 (0%)
Frame = -3
Query: 307 PGISFMKLHPNIVKXXXXXXXXXEKQITDFI-FRGRDKPALKSSSKSVTTNNPAALKSSS 131
P F+K+HP +VK E I + FR +KP K+++ S + S++
Sbjct: 375 PDSEFIKMHPEVVKKQDDEWGNIENNINELPWFRRNNKPGTKTAATSKS--------SAA 426
Query: 130 KQTSKPSNGGPSRMPMSDETCEALPKVLQKIFQNHNVCSFQQI 2
+KP +S +T +A+ +VL K+F+ VCSFQQ+
Sbjct: 427 GSQAKPKVAADK---LSSQTRDAINEVLHKLFKRDKVCSFQQV 466
>ref|XP_006590438.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like
[Glycine max]
Length = 697
Score = 56.2 bits (134), Expect(2) = 1e-11
Identities = 35/104 (33%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Frame = -3
Query: 310 IPGISFMKLHPNIVKXXXXXXXXXEKQITDFIFR-GRDKPALKSSSKSVTTNNPAALKSS 134
+P SF KL+P+IV+ EKQ++ F G+ K + + +SS
Sbjct: 470 LPDESFKKLYPDIVEKQEELFKGLEKQLSGFSSNVGKRKIGKNAVANQGVNTEVHKSESS 529
Query: 133 SKQTSKPSNGGPSRMPMSDETCEALPKVLQKIFQNHNVCSFQQI 2
++ + P++M MS+ET ALP L+K+FQ H VCSF+ I
Sbjct: 530 DQRVTSLGRVPPAKMTMSNETRHALPIALKKLFQTHKVCSFKLI 573
Score = 38.5 bits (88), Expect(2) = 1e-11
Identities = 29/62 (46%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Frame = -2
Query: 485 KGSLLNAQG-MEELARDYVLLLLSKSPLVHNSRLPPQ-SELVKAVRDVLNVLASPRRTLD 312
K SLL G +E LARDY LLL SKS V S + + ELV VR+ L + R LD
Sbjct: 396 KSSLLYPDGGVETLARDYSLLLFSKSLKVQFSDVSIRGGELVNRVRNCLKIFGVERNDLD 455
Query: 311 DS 306
S
Sbjct: 456 KS 457
>gb|ABU45208.1| unknown [Solanum bulbocastanum]
Length = 654
Score = 54.7 bits (130), Expect(2) = 1e-11
Identities = 37/103 (35%), Positives = 49/103 (47%)
Frame = -3
Query: 310 IPGISFMKLHPNIVKXXXXXXXXXEKQITDFIFRGRDKPALKSSSKSVTTNNPAALKSSS 131
+P F L+ ++V+ KQI D + GR++P +K+ N AL SS
Sbjct: 451 LPDKKFENLYGDVVREQQAIWDSMGKQINDILHGGRNRPTMKNPLPKA---NLPALSSSD 507
Query: 130 KQTSKPSNGGPSRMPMSDETCEALPKVLQKIFQNHNVCSFQQI 2
K T R MS+E ALPK LQ IF+ H VCS QI
Sbjct: 508 KPTPTTF----LRTSMSEEIRGALPKALQNIFRIHKVCSLLQI 546
Score = 40.0 bits (92), Expect(2) = 1e-11
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Frame = -2
Query: 491 VPKGSLL--NAQGMEELARDYVLLLLSKSPLVHNSRLPPQSELVKAVRDVLNVLASPRRT 318
VPK SL+ G+E LAR++VL +K+ L+ S + E +KA VL LA R
Sbjct: 383 VPKSSLVYDTNNGVEVLARNFVLYEFTKNTLIKKSVFGRRPEFLKAATPVLKSLAVERPD 442
Query: 317 LDD 309
LDD
Sbjct: 443 LDD 445
>gb|ABU45174.1| unknown [Solanum melongena]
Length = 664
Score = 55.1 bits (131), Expect(2) = 2e-11
Identities = 35/103 (33%), Positives = 50/103 (48%)
Frame = -3
Query: 310 IPGISFMKLHPNIVKXXXXXXXXXEKQITDFIFRGRDKPALKSSSKSVTTNNPAALKSSS 131
+P F L+ ++V+ KQI D I GR++P +K+ NP A +
Sbjct: 461 LPDKKFENLYGDVVREQQAIWETMGKQINDIIHGGRNRPTVKNPL------NPKANIPAV 514
Query: 130 KQTSKPSNGGPSRMPMSDETCEALPKVLQKIFQNHNVCSFQQI 2
KP + R +S+E EAL K LQ +F+ H VCS QQI
Sbjct: 515 ASGDKPIHNTFLRTSISEEIREALLKALQNVFRIHKVCSLQQI 557
Score = 38.9 bits (89), Expect(2) = 2e-11
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = -2
Query: 491 VPKGSLL--NAQGMEELARDYVLLLLSKSPLVHNSRLPPQSELVKAVRDVLNVLASPRRT 318
VPK SL+ G+E LAR+YVL +KS L+ S + E +KA L LA R
Sbjct: 393 VPKSSLVYDTNNGVEVLARNYVLYEFTKSTLIKKSVFGRRPEFLKAATQALKSLAIERPD 452
Query: 317 LDD 309
++D
Sbjct: 453 MND 455
>gb|EOX91150.1| Transcription regulators,zinc ion binding, putative isoform 3
[Theobroma cacao]
Length = 736
Score = 55.1 bits (131), Expect(2) = 5e-11
Identities = 36/98 (36%), Positives = 48/98 (48%)
Frame = -3
Query: 295 FMKLHPNIVKXXXXXXXXXEKQITDFIFRGRDKPALKSSSKSVTTNNPAALKSSSKQTSK 116
F KL+P+IVK E + + I RG S +K T P +S K +
Sbjct: 478 FKKLYPDIVKNQEQIWRAGEDNVINHICRGAKGGP--SRTKPGTVIKPEKAMNSDKGVRR 535
Query: 115 PSNGGPSRMPMSDETCEALPKVLQKIFQNHNVCSFQQI 2
+ + MSDET EA+PK L+K+FQ H VCS Q I
Sbjct: 536 VAPAVQAGRTMSDETREAIPKALKKVFQTHKVCSLQLI 573
Score = 37.7 bits (86), Expect(2) = 5e-11
Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Frame = -2
Query: 491 VPKGSLLNAQG-MEELARDYVLLLLSKSPLVHNSRLPPQSELVK-AVRDVLNVLASPRRT 318
VPK SLL + + LARDYVLLL SK+P++ +++ S K V+ L +LA R +
Sbjct: 405 VPKSSLLFPEDPYKSLARDYVLLLFSKNPIISLAQVHALSPSRKEEVKGFLKILAIERPS 464
Query: 317 LDD 309
D
Sbjct: 465 FKD 467
>gb|EOX91148.1| SIN-like family protein, putative isoform 1 [Theobroma cacao]
Length = 700
Score = 55.1 bits (131), Expect(2) = 5e-11
Identities = 36/98 (36%), Positives = 48/98 (48%)
Frame = -3
Query: 295 FMKLHPNIVKXXXXXXXXXEKQITDFIFRGRDKPALKSSSKSVTTNNPAALKSSSKQTSK 116
F KL+P+IVK E + + I RG S +K T P +S K +
Sbjct: 478 FKKLYPDIVKNQEQIWRAGEDNVINHICRGAKGGP--SRTKPGTVIKPEKAMNSDKGVRR 535
Query: 115 PSNGGPSRMPMSDETCEALPKVLQKIFQNHNVCSFQQI 2
+ + MSDET EA+PK L+K+FQ H VCS Q I
Sbjct: 536 VAPAVQAGRTMSDETREAIPKALKKVFQTHKVCSLQLI 573
Score = 37.7 bits (86), Expect(2) = 5e-11
Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Frame = -2
Query: 491 VPKGSLLNAQG-MEELARDYVLLLLSKSPLVHNSRLPPQSELVK-AVRDVLNVLASPRRT 318
VPK SLL + + LARDYVLLL SK+P++ +++ S K V+ L +LA R +
Sbjct: 405 VPKSSLLFPEDPYKSLARDYVLLLFSKNPIISLAQVHALSPSRKEEVKGFLKILAIERPS 464
Query: 317 LDD 309
D
Sbjct: 465 FKD 467
>ref|XP_004245771.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like
[Solanum lycopersicum]
Length = 669
Score = 57.4 bits (137), Expect(2) = 5e-11
Identities = 35/102 (34%), Positives = 52/102 (50%)
Frame = -3
Query: 307 PGISFMKLHPNIVKXXXXXXXXXEKQITDFIFRGRDKPALKSSSKSVTTNNPAALKSSSK 128
P F L+ ++V+ KQI D + GR +P +K+ N A ++
Sbjct: 444 PDKKFENLYGDVVREQQATWECLGKQINDVLPGGRTRPTMKNPI------NRNADITALP 497
Query: 127 QTSKPSNGGPSRMPMSDETCEALPKVLQKIFQNHNVCSFQQI 2
KP++ R MS+E EALPK LQ++F+ + VCSFQQI
Sbjct: 498 SGDKPTSSSLLRTSMSEEIREALPKALQEVFRTYKVCSFQQI 539
Score = 35.4 bits (80), Expect(2) = 5e-11
Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = -2
Query: 491 VPKGSLLNA--QGMEELARDYVLLLLSKSPLVHNSRLPPQSELVKAVRDVLNVLASPRRT 318
VPK SL+ G+E LAR++VL +K L+ S + E +KA L LA R
Sbjct: 375 VPKSSLVYGTNSGVEVLARNFVLYEFTKGILIKKSVFGRRPEFLKAATPALKSLAVERPD 434
Query: 317 LDD 309
L+D
Sbjct: 435 LND 437
>ref|XP_004232385.1| PREDICTED: uncharacterized protein LOC101252245 [Solanum
lycopersicum]
Length = 659
Score = 54.7 bits (130), Expect(2) = 5e-11
Identities = 34/103 (33%), Positives = 50/103 (48%)
Frame = -3
Query: 310 IPGISFMKLHPNIVKXXXXXXXXXEKQITDFIFRGRDKPALKSSSKSVTTNNPAALKSSS 131
+P F L+ ++V+ KQI D + GR++P LK+ NP A +
Sbjct: 442 LPDKKFENLYGDVVREQEAIWESMGKQINDIMHGGRNRPTLKNPL------NPKANIPAL 495
Query: 130 KQTSKPSNGGPSRMPMSDETCEALPKVLQKIFQNHNVCSFQQI 2
+ KP+ R +S+E ALPK LQ +F+ H VCS QI
Sbjct: 496 SSSDKPTPTTFLRTSLSEEIRGALPKALQNVFRIHKVCSLLQI 538
Score = 38.1 bits (87), Expect(2) = 5e-11
Identities = 26/63 (41%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = -2
Query: 491 VPKGSLL--NAQGMEELARDYVLLLLSKSPLVHNSRLPPQSELVKAVRDVLNVLASPRRT 318
V K SL+ G+E LAR++VL +KS L+ S + E +KA VL LA R
Sbjct: 374 VAKSSLVYDTNNGVEVLARNFVLYEFTKSTLIKKSVFGRRPEFLKAATPVLKSLAVERPD 433
Query: 317 LDD 309
LDD
Sbjct: 434 LDD 436
>gb|EOX91149.1| Transcription regulators,zinc ion binding, putative isoform 2
[Theobroma cacao]
Length = 588
Score = 55.1 bits (131), Expect(2) = 5e-11
Identities = 36/98 (36%), Positives = 48/98 (48%)
Frame = -3
Query: 295 FMKLHPNIVKXXXXXXXXXEKQITDFIFRGRDKPALKSSSKSVTTNNPAALKSSSKQTSK 116
F KL+P+IVK E + + I RG S +K T P +S K +
Sbjct: 381 FKKLYPDIVKNQEQIWRAGEDNVINHICRGAKGGP--SRTKPGTVIKPEKAMNSDKGVRR 438
Query: 115 PSNGGPSRMPMSDETCEALPKVLQKIFQNHNVCSFQQI 2
+ + MSDET EA+PK L+K+FQ H VCS Q I
Sbjct: 439 VAPAVQAGRTMSDETREAIPKALKKVFQTHKVCSLQLI 476
Score = 37.7 bits (86), Expect(2) = 5e-11
Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Frame = -2
Query: 491 VPKGSLLNAQG-MEELARDYVLLLLSKSPLVHNSRLPPQSELVK-AVRDVLNVLASPRRT 318
VPK SLL + + LARDYVLLL SK+P++ +++ S K V+ L +LA R +
Sbjct: 308 VPKSSLLFPEDPYKSLARDYVLLLFSKNPIISLAQVHALSPSRKEEVKGFLKILAIERPS 367
Query: 317 LDD 309
D
Sbjct: 368 FKD 370
>gb|ESW29064.1| hypothetical protein PHAVU_002G0404001g, partial [Phaseolus
vulgaris]
Length = 341
Score = 52.0 bits (123), Expect(2) = 4e-10
Identities = 38/105 (36%), Positives = 54/105 (51%), Gaps = 2/105 (1%)
Frame = -3
Query: 310 IPGISFMKLHPNIVKXXXXXXXXXEKQITDFIFRGRDKPALKSSSKSVTTNNPAALKSSS 131
+P SF KL+P+IV+ E+ + + + KS+ + NN A LKS S
Sbjct: 113 LPDESFKKLYPDIVEKQEKLFKGLEQHLPGLVSNVGKRKIGKSAVATQGVNNDA-LKSVS 171
Query: 130 KQTSKPSNGGPS--RMPMSDETCEALPKVLQKIFQNHNVCSFQQI 2
S G S +M MS+ET ALP L+K+FQ + VCSF+ I
Sbjct: 172 SDQRPTSLAGVSTGKMTMSNETRHALPIALKKLFQTNKVCSFKVI 216
Score = 37.7 bits (86), Expect(2) = 4e-10
Identities = 26/61 (42%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = -2
Query: 485 KGSLLNAQG-MEELARDYVLLLLSKSPLVHNSRLPPQSELVKAVRDVLNVLASPRRTLDD 309
K SLL G LARDYVLL+ SK+ V +S L + EL V+D L LD
Sbjct: 40 KSSLLYPNGGAASLARDYVLLMFSKNLKVQSSDLNVRGELATHVKDFLKQFGLETANLDK 99
Query: 308 S 306
S
Sbjct: 100 S 100
>gb|AAG01125.1|AF273333_10 BAC19.10 [Solanum lycopersicum]
Length = 683
Score = 50.4 bits (119), Expect(2) = 8e-10
Identities = 31/98 (31%), Positives = 47/98 (47%)
Frame = -3
Query: 310 IPGISFMKLHPNIVKXXXXXXXXXEKQITDFIFRGRDKPALKSSSKSVTTNNPAALKSSS 131
+P F L+ ++V+ KQI D + GR++P LK+ NP A +
Sbjct: 425 LPDKKFENLYGDVVREQEAIWESMGKQINDIMHGGRNRPTLKNPL------NPKANIPAL 478
Query: 130 KQTSKPSNGGPSRMPMSDETCEALPKVLQKIFQNHNVC 17
+ KP+ R +S+E ALPK LQ +F+ H VC
Sbjct: 479 SSSDKPTPTTFLRTSLSEEIRGALPKALQNVFRIHKVC 516
Score = 38.1 bits (87), Expect(2) = 8e-10
Identities = 26/63 (41%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = -2
Query: 491 VPKGSLL--NAQGMEELARDYVLLLLSKSPLVHNSRLPPQSELVKAVRDVLNVLASPRRT 318
V K SL+ G+E LAR++VL +KS L+ S + E +KA VL LA R
Sbjct: 357 VAKSSLVYDTNNGVEVLARNFVLYEFTKSTLIKKSVFGRRPEFLKAATPVLKSLAVERPD 416
Query: 317 LDD 309
LDD
Sbjct: 417 LDD 419
>ref|XP_006355444.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like
isoform X4 [Solanum tuberosum]
Length = 536
Score = 51.6 bits (122), Expect(2) = 2e-09
Identities = 31/97 (31%), Positives = 48/97 (49%)
Frame = -3
Query: 307 PGISFMKLHPNIVKXXXXXXXXXEKQITDFIFRGRDKPALKSSSKSVTTNNPAALKSSSK 128
P F L+ ++V+ KQI D + GR++P +K+ NP A +
Sbjct: 444 PDKKFENLYGDVVREKQATWECLGKQINDVLPGGRNRPTMKNPL------NPNADIPALP 497
Query: 127 QTSKPSNGGPSRMPMSDETCEALPKVLQKIFQNHNVC 17
KP++ R MS+E EALPK LQ++F+ + VC
Sbjct: 498 SGDKPTSSSLLRTSMSEEIREALPKALQEVFRTYKVC 534
Score = 35.4 bits (80), Expect(2) = 2e-09
Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = -2
Query: 491 VPKGSLLNA--QGMEELARDYVLLLLSKSPLVHNSRLPPQSELVKAVRDVLNVLASPRRT 318
VPK SL+ G+E LAR++VL +K L+ S + E +KA L LA R
Sbjct: 375 VPKSSLVYGTNSGVEVLARNFVLYEFTKGILIKKSVFGRRPEFLKAATPALKSLAVERPD 434
Query: 317 LDD 309
L+D
Sbjct: 435 LND 437