BLASTX nr result
ID: Catharanthus23_contig00011475
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00011475
(389 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOX91100.1| Clathrin adaptor complex small chain family prote... 77 3e-12
ref|XP_002521592.1| AP-3 complex subunit sigma-1, putative [Rici... 76 5e-12
gb|AFK43698.1| unknown [Medicago truncatula] 75 7e-12
gb|EMJ03877.1| hypothetical protein PRUPE_ppa012523mg [Prunus pe... 74 2e-11
gb|ESW28036.1| hypothetical protein PHAVU_003G253500g [Phaseolus... 73 4e-11
ref|XP_002266832.1| PREDICTED: AP-3 complex subunit sigma [Vitis... 73 4e-11
ref|XP_006598730.1| PREDICTED: uncharacterized protein LOC100781... 72 6e-11
ref|XP_006403989.1| hypothetical protein EUTSA_v10010773mg [Eutr... 72 6e-11
ref|XP_004509260.1| PREDICTED: AP-3 complex subunit sigma-like [... 72 6e-11
ref|XP_006291952.1| hypothetical protein CARUB_v10018140mg [Caps... 72 6e-11
ref|XP_006598731.1| PREDICTED: uncharacterized protein LOC100781... 72 6e-11
ref|NP_001236188.1| uncharacterized protein LOC100306517 [Glycin... 72 6e-11
ref|NP_190655.2| Clathrin adaptor complex small chain family pro... 72 6e-11
gb|EXC35484.1| AP-3 complex subunit sigma [Morus notabilis] 72 8e-11
ref|XP_002310231.2| clathrin adaptor complex small chain family ... 72 8e-11
ref|XP_002876049.1| clathrin adaptor complex small chain family ... 71 2e-10
ref|XP_004287897.1| PREDICTED: AP-3 complex subunit sigma-like [... 70 3e-10
ref|XP_004142366.1| PREDICTED: AP-3 complex subunit sigma-like [... 70 4e-10
ref|XP_006425676.1| hypothetical protein CICLE_v10026648mg [Citr... 68 1e-09
ref|NP_001242788.1| uncharacterized protein LOC100781795 [Glycin... 67 2e-09
>gb|EOX91100.1| Clathrin adaptor complex small chain family protein [Theobroma
cacao]
Length = 166
Score = 76.6 bits (187), Expect = 3e-12
Identities = 42/59 (71%), Positives = 45/59 (76%)
Frame = +2
Query: 2 IVFNYSKTQTILDEIISGGQLLETSSTEVMKTVEEITKLEAAXXXXXXXLLPKSLVAWR 178
IVFNYSK TILDEII GGQ+LETSSTEVMK VEEI+KLEAA L+PKS WR
Sbjct: 108 IVFNYSKMHTILDEIIFGGQVLETSSTEVMKAVEEISKLEAA--SNAITLIPKSASGWR 164
>ref|XP_002521592.1| AP-3 complex subunit sigma-1, putative [Ricinus communis]
gi|223539270|gb|EEF40863.1| AP-3 complex subunit
sigma-1, putative [Ricinus communis]
Length = 166
Score = 75.9 bits (185), Expect = 5e-12
Identities = 40/59 (67%), Positives = 47/59 (79%)
Frame = +2
Query: 2 IVFNYSKTQTILDEIISGGQLLETSSTEVMKTVEEITKLEAAXXXXXXXLLPKSLVAWR 178
IVFNYSK TILDEII GGQ+LETSSTEVMK VEEI+KLEA+ L+PK++ +WR
Sbjct: 108 IVFNYSKLHTILDEIIFGGQVLETSSTEVMKAVEEISKLEAS--SYSMTLVPKTVASWR 164
>gb|AFK43698.1| unknown [Medicago truncatula]
Length = 166
Score = 75.5 bits (184), Expect = 7e-12
Identities = 40/59 (67%), Positives = 46/59 (77%)
Frame = +2
Query: 2 IVFNYSKTQTILDEIISGGQLLETSSTEVMKTVEEITKLEAAXXXXXXXLLPKSLVAWR 178
+VFNYSK TILDEII GGQ+LETSS EV+K VEEITKLEAA L+PKS+ +WR
Sbjct: 108 VVFNYSKMHTILDEIIFGGQVLETSSAEVLKAVEEITKLEAA--SSAINLVPKSVSSWR 164
>gb|EMJ03877.1| hypothetical protein PRUPE_ppa012523mg [Prunus persica]
Length = 166
Score = 73.9 bits (180), Expect = 2e-11
Identities = 39/59 (66%), Positives = 45/59 (76%)
Frame = +2
Query: 2 IVFNYSKTQTILDEIISGGQLLETSSTEVMKTVEEITKLEAAXXXXXXXLLPKSLVAWR 178
+V NYSK T+LDEII GGQ+LETSSTEVMK VEEI+KLE A L+PKS+ AWR
Sbjct: 108 VVLNYSKMHTVLDEIIFGGQVLETSSTEVMKAVEEISKLETA--SNAISLVPKSVSAWR 164
>gb|ESW28036.1| hypothetical protein PHAVU_003G253500g [Phaseolus vulgaris]
Length = 166
Score = 72.8 bits (177), Expect = 4e-11
Identities = 38/59 (64%), Positives = 45/59 (76%)
Frame = +2
Query: 2 IVFNYSKTQTILDEIISGGQLLETSSTEVMKTVEEITKLEAAXXXXXXXLLPKSLVAWR 178
IVFNYSK TILDEII GGQ+LETSSTEVM+ +EEI +L+AA L+PKS+ WR
Sbjct: 108 IVFNYSKMHTILDEIILGGQVLETSSTEVMRAIEEIARLDAA--SNAINLVPKSVSGWR 164
>ref|XP_002266832.1| PREDICTED: AP-3 complex subunit sigma [Vitis vinifera]
gi|297735157|emb|CBI17519.3| unnamed protein product
[Vitis vinifera]
Length = 165
Score = 72.8 bits (177), Expect = 4e-11
Identities = 39/59 (66%), Positives = 44/59 (74%)
Frame = +2
Query: 2 IVFNYSKTQTILDEIISGGQLLETSSTEVMKTVEEITKLEAAXXXXXXXLLPKSLVAWR 178
IVFNYSK TILDEII GGQ+LETSS EVMK VEEI++LE A L+PKS+ WR
Sbjct: 108 IVFNYSKLHTILDEIIFGGQVLETSSAEVMKAVEEISRLETA--SNTITLVPKSISGWR 164
>ref|XP_006598730.1| PREDICTED: uncharacterized protein LOC100781795 isoform X1 [Glycine
max]
Length = 194
Score = 72.4 bits (176), Expect = 6e-11
Identities = 38/59 (64%), Positives = 45/59 (76%)
Frame = +2
Query: 2 IVFNYSKTQTILDEIISGGQLLETSSTEVMKTVEEITKLEAAXXXXXXXLLPKSLVAWR 178
IVFNYSK TILDEII GGQ+LETSS EVMK +EEI++LE+A L+PKS+ WR
Sbjct: 136 IVFNYSKMHTILDEIILGGQVLETSSNEVMKAIEEISRLESA--SNAINLVPKSVSGWR 192
>ref|XP_006403989.1| hypothetical protein EUTSA_v10010773mg [Eutrema salsugineum]
gi|557105108|gb|ESQ45442.1| hypothetical protein
EUTSA_v10010773mg [Eutrema salsugineum]
Length = 166
Score = 72.4 bits (176), Expect = 6e-11
Identities = 38/59 (64%), Positives = 44/59 (74%)
Frame = +2
Query: 2 IVFNYSKTQTILDEIISGGQLLETSSTEVMKTVEEITKLEAAXXXXXXXLLPKSLVAWR 178
IVFNYSK +LDEI+ GGQ+LETSS EVMK VEEI+KLEAA L+PKS+ WR
Sbjct: 108 IVFNYSKMHAVLDEIVFGGQVLETSSAEVMKAVEEISKLEAA--SNSISLVPKSVSGWR 164
>ref|XP_004509260.1| PREDICTED: AP-3 complex subunit sigma-like [Cicer arietinum]
Length = 194
Score = 72.4 bits (176), Expect = 6e-11
Identities = 39/59 (66%), Positives = 46/59 (77%)
Frame = +2
Query: 2 IVFNYSKTQTILDEIISGGQLLETSSTEVMKTVEEITKLEAAXXXXXXXLLPKSLVAWR 178
+VFNYSK TILDEII GGQ+LETSSTEV+K VEEI+KLEAA L+ KS+ +WR
Sbjct: 136 VVFNYSKMHTILDEIIFGGQVLETSSTEVIKAVEEISKLEAA--SSSINLVSKSVSSWR 192
>ref|XP_006291952.1| hypothetical protein CARUB_v10018140mg [Capsella rubella]
gi|482560659|gb|EOA24850.1| hypothetical protein
CARUB_v10018140mg [Capsella rubella]
Length = 166
Score = 72.4 bits (176), Expect = 6e-11
Identities = 38/59 (64%), Positives = 44/59 (74%)
Frame = +2
Query: 2 IVFNYSKTQTILDEIISGGQLLETSSTEVMKTVEEITKLEAAXXXXXXXLLPKSLVAWR 178
IVFNYSK +LDEI+ GGQ+LETSS EVMK VEEI+KLEAA L+PKS+ WR
Sbjct: 108 IVFNYSKMHAVLDEIVFGGQVLETSSAEVMKAVEEISKLEAA--SNSISLVPKSVSGWR 164
>ref|XP_006598731.1| PREDICTED: uncharacterized protein LOC100781795 isoform X2 [Glycine
max]
Length = 166
Score = 72.4 bits (176), Expect = 6e-11
Identities = 38/59 (64%), Positives = 45/59 (76%)
Frame = +2
Query: 2 IVFNYSKTQTILDEIISGGQLLETSSTEVMKTVEEITKLEAAXXXXXXXLLPKSLVAWR 178
IVFNYSK TILDEII GGQ+LETSS EVMK +EEI++LE+A L+PKS+ WR
Sbjct: 108 IVFNYSKMHTILDEIILGGQVLETSSNEVMKAIEEISRLESA--SNAINLVPKSVSGWR 164
>ref|NP_001236188.1| uncharacterized protein LOC100306517 [Glycine max]
gi|571437826|ref|XP_006574342.1| PREDICTED:
uncharacterized protein LOC100306517 isoform X1 [Glycine
max] gi|571437828|ref|XP_006574343.1| PREDICTED:
uncharacterized protein LOC100306517 isoform X2 [Glycine
max] gi|255628757|gb|ACU14723.1| unknown [Glycine max]
Length = 166
Score = 72.4 bits (176), Expect = 6e-11
Identities = 38/59 (64%), Positives = 45/59 (76%)
Frame = +2
Query: 2 IVFNYSKTQTILDEIISGGQLLETSSTEVMKTVEEITKLEAAXXXXXXXLLPKSLVAWR 178
IVFNYSK TILDEII GGQ+LETSS EVMK +EEI++LE+A L+PKS+ WR
Sbjct: 108 IVFNYSKMHTILDEIILGGQVLETSSNEVMKAIEEISRLESA--SKAINLVPKSVSGWR 164
>ref|NP_190655.2| Clathrin adaptor complex small chain family protein [Arabidopsis
thaliana] gi|75161581|sp|Q8VZ37.1|AP3S_ARATH RecName:
Full=AP-3 complex subunit sigma; AltName: Full=AP-3
complex subunit sigma-3; AltName: Full=Adapter-related
protein complex 3 sigma subunit; AltName:
Full=Sigma-adaptin 3; AltName: Full=Sigma3-adaptin
gi|17529106|gb|AAL38763.1| putative clathrin coat
assembly protein [Arabidopsis thaliana]
gi|20465749|gb|AAM20343.1| putative clathrin coat
assembly protein [Arabidopsis thaliana]
gi|332645198|gb|AEE78719.1| Clathrin adaptor complex
small chain family protein [Arabidopsis thaliana]
Length = 166
Score = 72.4 bits (176), Expect = 6e-11
Identities = 38/59 (64%), Positives = 44/59 (74%)
Frame = +2
Query: 2 IVFNYSKTQTILDEIISGGQLLETSSTEVMKTVEEITKLEAAXXXXXXXLLPKSLVAWR 178
IVFNYSK +LDEI+ GGQ+LETSS EVMK VEEI+KLEAA L+PKS+ WR
Sbjct: 108 IVFNYSKMHAVLDEIVFGGQVLETSSAEVMKAVEEISKLEAA--SNSISLVPKSVSGWR 164
>gb|EXC35484.1| AP-3 complex subunit sigma [Morus notabilis]
Length = 166
Score = 72.0 bits (175), Expect = 8e-11
Identities = 38/59 (64%), Positives = 46/59 (77%)
Frame = +2
Query: 2 IVFNYSKTQTILDEIISGGQLLETSSTEVMKTVEEITKLEAAXXXXXXXLLPKSLVAWR 178
IVFNYSK TILDEII GGQ+LETSS+EVMK VEEI++L+ A L+PKS+ +WR
Sbjct: 108 IVFNYSKMHTILDEIIFGGQVLETSSSEVMKAVEEISRLDTA--SNSISLVPKSVSSWR 164
>ref|XP_002310231.2| clathrin adaptor complex small chain family protein [Populus
trichocarpa] gi|550334754|gb|EEE90681.2| clathrin
adaptor complex small chain family protein [Populus
trichocarpa]
Length = 166
Score = 72.0 bits (175), Expect = 8e-11
Identities = 38/59 (64%), Positives = 45/59 (76%)
Frame = +2
Query: 2 IVFNYSKTQTILDEIISGGQLLETSSTEVMKTVEEITKLEAAXXXXXXXLLPKSLVAWR 178
IVFNYSK I+DEIISGGQ+LETSSTEVM+ VEEI+K EAA L+PK++ WR
Sbjct: 108 IVFNYSKLHAIIDEIISGGQVLETSSTEVMRAVEEISKSEAA--SNSISLVPKTVSGWR 164
>ref|XP_002876049.1| clathrin adaptor complex small chain family protein [Arabidopsis
lyrata subsp. lyrata] gi|297321887|gb|EFH52308.1|
clathrin adaptor complex small chain family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 166
Score = 70.9 bits (172), Expect = 2e-10
Identities = 37/59 (62%), Positives = 44/59 (74%)
Frame = +2
Query: 2 IVFNYSKTQTILDEIISGGQLLETSSTEVMKTVEEITKLEAAXXXXXXXLLPKSLVAWR 178
IVFNYSK +LDEI+ GGQ+LETSS EV+K VEEI+KLEAA L+PKS+ WR
Sbjct: 108 IVFNYSKMHAVLDEIVFGGQVLETSSAEVIKAVEEISKLEAA--SNSISLVPKSVSGWR 164
>ref|XP_004287897.1| PREDICTED: AP-3 complex subunit sigma-like [Fragaria vesca subsp.
vesca]
Length = 166
Score = 70.1 bits (170), Expect = 3e-10
Identities = 36/59 (61%), Positives = 44/59 (74%)
Frame = +2
Query: 2 IVFNYSKTQTILDEIISGGQLLETSSTEVMKTVEEITKLEAAXXXXXXXLLPKSLVAWR 178
+V NYSK T+LDEII GGQ+LETSSTEV+K VEEI +LE A L+PKS+ +WR
Sbjct: 108 VVLNYSKLHTVLDEIIFGGQVLETSSTEVLKAVEEIARLETA--SNAISLVPKSVSSWR 164
>ref|XP_004142366.1| PREDICTED: AP-3 complex subunit sigma-like [Cucumis sativus]
gi|449521621|ref|XP_004167828.1| PREDICTED: AP-3 complex
subunit sigma-like [Cucumis sativus]
Length = 165
Score = 69.7 bits (169), Expect = 4e-10
Identities = 37/59 (62%), Positives = 44/59 (74%)
Frame = +2
Query: 2 IVFNYSKTQTILDEIISGGQLLETSSTEVMKTVEEITKLEAAXXXXXXXLLPKSLVAWR 178
+VFNYSK TILDEIISGGQ+LETSS+EVMK VEEI+KLE A + K++ WR
Sbjct: 108 LVFNYSKMHTILDEIISGGQVLETSSSEVMKAVEEISKLETA--SNSINFVSKTVSGWR 164
>ref|XP_006425676.1| hypothetical protein CICLE_v10026648mg [Citrus clementina]
gi|568824821|ref|XP_006466790.1| PREDICTED: AP-3 complex
subunit sigma-like [Citrus sinensis]
gi|557527666|gb|ESR38916.1| hypothetical protein
CICLE_v10026648mg [Citrus clementina]
Length = 166
Score = 67.8 bits (164), Expect = 1e-09
Identities = 37/59 (62%), Positives = 44/59 (74%)
Frame = +2
Query: 2 IVFNYSKTQTILDEIISGGQLLETSSTEVMKTVEEITKLEAAXXXXXXXLLPKSLVAWR 178
IV+NYSK TILDEII GGQ+LETSS EV+K VEEI+KLE+A L+ KS+ WR
Sbjct: 108 IVYNYSKLHTILDEIIFGGQVLETSSIEVIKAVEEISKLESA--SNAIALVSKSVSGWR 164
>ref|NP_001242788.1| uncharacterized protein LOC100781795 [Glycine max]
gi|255633744|gb|ACU17232.1| unknown [Glycine max]
Length = 168
Score = 67.0 bits (162), Expect = 2e-09
Identities = 36/55 (65%), Positives = 43/55 (78%)
Frame = +2
Query: 2 IVFNYSKTQTILDEIISGGQLLETSSTEVMKTVEEITKLEAAXXXXXXXLLPKSL 166
IVFNYSK TILDEII GGQ+LETSS EVMK +EEI++LE+A L+PKS+
Sbjct: 108 IVFNYSKMHTILDEIILGGQVLETSSNEVMKAIEEISRLESA--SNAINLVPKSV 160