BLASTX nr result
ID: Catharanthus23_contig00011386
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00011386
(1186 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006359612.1| PREDICTED: probable ribosome-binding factor ... 245 3e-62
ref|XP_004230968.1| PREDICTED: probable ribosome-binding factor ... 244 4e-62
ref|XP_006487286.1| PREDICTED: probable ribosome-binding factor ... 241 5e-61
ref|XP_006423529.1| hypothetical protein CICLE_v10029227mg [Citr... 241 5e-61
gb|EMJ02497.1| hypothetical protein PRUPE_ppa011113mg [Prunus pe... 240 9e-61
ref|XP_002306146.2| hypothetical protein POPTR_0004s17120g [Popu... 239 1e-60
gb|EOX97829.1| Ribosome-binding factor A family protein isoform ... 239 1e-60
ref|XP_002513014.1| Ribosome-binding factor A, putative [Ricinus... 239 2e-60
ref|XP_003631582.1| PREDICTED: probable ribosome-binding factor ... 239 2e-60
ref|XP_002270280.1| PREDICTED: probable ribosome-binding factor ... 239 2e-60
gb|EXB61806.1| putative ribosome-binding factor A [Morus notabilis] 238 4e-60
ref|XP_006412190.1| hypothetical protein EUTSA_v10026220mg [Eutr... 238 4e-60
ref|XP_003527611.1| PREDICTED: probable ribosome-binding factor ... 237 8e-60
gb|ESW07903.1| hypothetical protein PHAVU_009G002100g [Phaseolus... 235 3e-59
ref|XP_004151338.1| PREDICTED: probable ribosome-binding factor ... 233 9e-59
ref|XP_003604015.1| hypothetical protein MTR_3g117600 [Medicago ... 233 1e-58
ref|XP_004290346.1| PREDICTED: probable ribosome-binding factor ... 232 2e-58
ref|XP_006284501.1| hypothetical protein CARUB_v10005701mg [Caps... 230 7e-58
ref|NP_195199.2| ribosome-binding factor A [Arabidopsis thalian... 230 1e-57
ref|XP_002867105.1| hypothetical protein ARALYDRAFT_353351 [Arab... 227 8e-57
>ref|XP_006359612.1| PREDICTED: probable ribosome-binding factor A, chloroplastic-like
[Solanum tuberosum]
Length = 225
Score = 245 bits (625), Expect = 3e-62
Identities = 127/140 (90%), Positives = 134/140 (95%)
Frame = -3
Query: 923 IKCMANPRRVKMVAKQIRRELSDMLLTDKVLQYAILPEAALGADRYLSSLTTISDVEVSA 744
I+CMANPRRVKMVAKQIRRELSDMLLTDKVLQYA+LPEAALGADRYLSSLTTISDVEVS
Sbjct: 56 IRCMANPRRVKMVAKQIRRELSDMLLTDKVLQYAVLPEAALGADRYLSSLTTISDVEVST 115
Query: 743 DLQVVKVYVSVFGDERGKEVAISGLKSKAKYVRGELGRRMKLRLTPEIRFIEDESLERGS 564
DLQVVKVYVSVFGDERGKEVA++GLKSKAKYVR ELGRRMKLRLTPEIRFIEDESLERGS
Sbjct: 116 DLQVVKVYVSVFGDERGKEVALTGLKSKAKYVRSELGRRMKLRLTPEIRFIEDESLERGS 175
Query: 563 RVIAILDKIKKENEEKMTKS 504
RV+AILD+IK ENE K + S
Sbjct: 176 RVLAILDRIKDENENKDSPS 195
>ref|XP_004230968.1| PREDICTED: probable ribosome-binding factor A, chloroplastic-like
[Solanum lycopersicum]
Length = 221
Score = 244 bits (624), Expect = 4e-62
Identities = 126/136 (92%), Positives = 132/136 (97%)
Frame = -3
Query: 923 IKCMANPRRVKMVAKQIRRELSDMLLTDKVLQYAILPEAALGADRYLSSLTTISDVEVSA 744
I+CMANPRRVKMVAKQIRRELSDMLLTDKVLQYA+LPEAALGADRYLSSLTTISDVEVS
Sbjct: 56 IRCMANPRRVKMVAKQIRRELSDMLLTDKVLQYAVLPEAALGADRYLSSLTTISDVEVST 115
Query: 743 DLQVVKVYVSVFGDERGKEVAISGLKSKAKYVRGELGRRMKLRLTPEIRFIEDESLERGS 564
DLQVVKVYVSVFGDERGKEVA++GLKSKAKYVR ELGRRMKLRLTPEIRFIEDESLERGS
Sbjct: 116 DLQVVKVYVSVFGDERGKEVALTGLKSKAKYVRSELGRRMKLRLTPEIRFIEDESLERGS 175
Query: 563 RVIAILDKIKKENEEK 516
RV+AILD+IK ENE K
Sbjct: 176 RVLAILDRIKDENENK 191
>ref|XP_006487286.1| PREDICTED: probable ribosome-binding factor A, chloroplastic-like
isoform X1 [Citrus sinensis]
gi|568867951|ref|XP_006487287.1| PREDICTED: probable
ribosome-binding factor A, chloroplastic-like isoform X2
[Citrus sinensis]
Length = 229
Score = 241 bits (614), Expect = 5e-61
Identities = 130/171 (76%), Positives = 144/171 (84%), Gaps = 4/171 (2%)
Frame = -3
Query: 1001 LKSVTVLQPAVQFPGARAGIFWGRC----SIKCMANPRRVKMVAKQIRRELSDMLLTDKV 834
L +T A P + A I R ++KCMANPRRVKMVAKQI+RELSDMLLTDKV
Sbjct: 31 LLPITSFNSATWAPKSTAAIHLRRSPTRKTVKCMANPRRVKMVAKQIQRELSDMLLTDKV 90
Query: 833 LQYAILPEAALGADRYLSSLTTISDVEVSADLQVVKVYVSVFGDERGKEVAISGLKSKAK 654
LQ+A+LPEAALGADRYLSSLTTISDVEVSADLQVVKVYVSVFGD+RGKEVAI+GLKSKAK
Sbjct: 91 LQFAVLPEAALGADRYLSSLTTISDVEVSADLQVVKVYVSVFGDDRGKEVAIAGLKSKAK 150
Query: 653 YVRGELGRRMKLRLTPEIRFIEDESLERGSRVIAILDKIKKENEEKMTKSE 501
YVR +LGRRMKLRLTPEIRFIEDES ERGSRVIAILD+IK E E +K++
Sbjct: 151 YVRSQLGRRMKLRLTPEIRFIEDESFERGSRVIAILDRIKAEKEAAKSKNK 201
>ref|XP_006423529.1| hypothetical protein CICLE_v10029227mg [Citrus clementina]
gi|567861752|ref|XP_006423530.1| hypothetical protein
CICLE_v10029227mg [Citrus clementina]
gi|557525463|gb|ESR36769.1| hypothetical protein
CICLE_v10029227mg [Citrus clementina]
gi|557525464|gb|ESR36770.1| hypothetical protein
CICLE_v10029227mg [Citrus clementina]
Length = 226
Score = 241 bits (614), Expect = 5e-61
Identities = 130/171 (76%), Positives = 144/171 (84%), Gaps = 4/171 (2%)
Frame = -3
Query: 1001 LKSVTVLQPAVQFPGARAGIFWGRC----SIKCMANPRRVKMVAKQIRRELSDMLLTDKV 834
L +T A P + A I R ++KCMANPRRVKMVAKQI+RELSDMLLTDKV
Sbjct: 28 LLPITSFNSATWAPKSTAAIHLRRSPTRKTVKCMANPRRVKMVAKQIQRELSDMLLTDKV 87
Query: 833 LQYAILPEAALGADRYLSSLTTISDVEVSADLQVVKVYVSVFGDERGKEVAISGLKSKAK 654
LQ+A+LPEAALGADRYLSSLTTISDVEVSADLQVVKVYVSVFGD+RGKEVAI+GLKSKAK
Sbjct: 88 LQFAVLPEAALGADRYLSSLTTISDVEVSADLQVVKVYVSVFGDDRGKEVAIAGLKSKAK 147
Query: 653 YVRGELGRRMKLRLTPEIRFIEDESLERGSRVIAILDKIKKENEEKMTKSE 501
YVR +LGRRMKLRLTPEIRFIEDES ERGSRVIAILD+IK E E +K++
Sbjct: 148 YVRSQLGRRMKLRLTPEIRFIEDESFERGSRVIAILDRIKAEKEAAKSKTK 198
>gb|EMJ02497.1| hypothetical protein PRUPE_ppa011113mg [Prunus persica]
Length = 223
Score = 240 bits (612), Expect = 9e-61
Identities = 141/202 (69%), Positives = 156/202 (77%), Gaps = 5/202 (2%)
Frame = -3
Query: 1091 MPQLLLLHHPSTVTTCSIMNFRRLRPQISSLKSVTV-LQPAVQFPGAR--AGIF-WG-RC 927
MPQ++L HHP S + P SS S + Q + + R AG+ W
Sbjct: 1 MPQVVL-HHPLLTPCLSHL------PSSSSTSSFPIRTQKSTAWIPQRNHAGLLRWHPTT 53
Query: 926 SIKCMANPRRVKMVAKQIRRELSDMLLTDKVLQYAILPEAALGADRYLSSLTTISDVEVS 747
+I+CMANPRRV MVAKQIRRELSDMLLTD VLQYAILPE ALGADRYLSSLTTISDVEVS
Sbjct: 54 TIRCMANPRRVAMVAKQIRRELSDMLLTDNVLQYAILPEVALGADRYLSSLTTISDVEVS 113
Query: 746 ADLQVVKVYVSVFGDERGKEVAISGLKSKAKYVRGELGRRMKLRLTPEIRFIEDESLERG 567
DLQVVKVYVSVFGDERGKEVA++GLKSKAKYVRGELG+RMKLRLTPEIRFIEDESLERG
Sbjct: 114 TDLQVVKVYVSVFGDERGKEVALAGLKSKAKYVRGELGKRMKLRLTPEIRFIEDESLERG 173
Query: 566 SRVIAILDKIKKENEEKMTKSE 501
SRVIAILDKIK E ++ + E
Sbjct: 174 SRVIAILDKIKNEKKDPDIQDE 195
>ref|XP_002306146.2| hypothetical protein POPTR_0004s17120g [Populus trichocarpa]
gi|550341216|gb|EEE86657.2| hypothetical protein
POPTR_0004s17120g [Populus trichocarpa]
Length = 224
Score = 239 bits (611), Expect = 1e-60
Identities = 134/185 (72%), Positives = 147/185 (79%)
Frame = -3
Query: 1076 LLHHPSTVTTCSIMNFRRLRPQISSLKSVTVLQPAVQFPGARAGIFWGRCSIKCMANPRR 897
LLH P + T NF + S+ S + P P F +IKCMANPRR
Sbjct: 8 LLHQPQPLLTYQ-SNFLPITTLYST--SFPIRSPKSTVPIHLQKPFMYGTTIKCMANPRR 64
Query: 896 VKMVAKQIRRELSDMLLTDKVLQYAILPEAALGADRYLSSLTTISDVEVSADLQVVKVYV 717
VKMVAKQI+RELSDMLLTDKVLQYA+LPEAALGAD+YLSSLTTISDVEVSADLQVVKVYV
Sbjct: 65 VKMVAKQIQRELSDMLLTDKVLQYAVLPEAALGADKYLSSLTTISDVEVSADLQVVKVYV 124
Query: 716 SVFGDERGKEVAISGLKSKAKYVRGELGRRMKLRLTPEIRFIEDESLERGSRVIAILDKI 537
SVFGD+RGKEVAI+GLKSKAKYVR +LGRRMKLRLTPEIRFIEDE LERGSRVIAILD+I
Sbjct: 125 SVFGDDRGKEVAIAGLKSKAKYVRSQLGRRMKLRLTPEIRFIEDEGLERGSRVIAILDRI 184
Query: 536 KKENE 522
K E +
Sbjct: 185 KAEKD 189
>gb|EOX97829.1| Ribosome-binding factor A family protein isoform 1 [Theobroma
cacao] gi|508705934|gb|EOX97830.1| Ribosome-binding
factor A family protein isoform 1 [Theobroma cacao]
Length = 212
Score = 239 bits (611), Expect = 1e-60
Identities = 123/135 (91%), Positives = 131/135 (97%)
Frame = -3
Query: 926 SIKCMANPRRVKMVAKQIRRELSDMLLTDKVLQYAILPEAALGADRYLSSLTTISDVEVS 747
+IKCMANPRRVKMVAKQIRRELSDMLLTDKVLQYA+LPEAALGADRYLSSLTTISDVEVS
Sbjct: 42 TIKCMANPRRVKMVAKQIRRELSDMLLTDKVLQYAVLPEAALGADRYLSSLTTISDVEVS 101
Query: 746 ADLQVVKVYVSVFGDERGKEVAISGLKSKAKYVRGELGRRMKLRLTPEIRFIEDESLERG 567
DLQVVKVYVSVFGDERGKE+A++GLKSK+KYVR ELG+RMKLRLTPEIRFIEDESLERG
Sbjct: 102 TDLQVVKVYVSVFGDERGKEIALAGLKSKSKYVRSELGKRMKLRLTPEIRFIEDESLERG 161
Query: 566 SRVIAILDKIKKENE 522
SRVIAILDKIK E +
Sbjct: 162 SRVIAILDKIKAEKK 176
>ref|XP_002513014.1| Ribosome-binding factor A, putative [Ricinus communis]
gi|223548025|gb|EEF49517.1| Ribosome-binding factor A,
putative [Ricinus communis]
Length = 221
Score = 239 bits (610), Expect = 2e-60
Identities = 124/143 (86%), Positives = 134/143 (93%)
Frame = -3
Query: 926 SIKCMANPRRVKMVAKQIRRELSDMLLTDKVLQYAILPEAALGADRYLSSLTTISDVEVS 747
+IKCMANPRRVKMVAKQI+RELSDMLLTDKVLQYAILPEAALGAD+YLSSLTTISDVEVS
Sbjct: 53 TIKCMANPRRVKMVAKQIQRELSDMLLTDKVLQYAILPEAALGADKYLSSLTTISDVEVS 112
Query: 746 ADLQVVKVYVSVFGDERGKEVAISGLKSKAKYVRGELGRRMKLRLTPEIRFIEDESLERG 567
DLQVVKVYVSVFGD+RGKEVAI+GLK+KAKYVR ELGRRMKLRLTPEIRFIEDES ERG
Sbjct: 113 TDLQVVKVYVSVFGDDRGKEVAIAGLKAKAKYVRSELGRRMKLRLTPEIRFIEDESFERG 172
Query: 566 SRVIAILDKIKKENEEKMTKSEV 498
SRV+AILDKIK E E ++ E+
Sbjct: 173 SRVLAILDKIKAEKENTGSEDEL 195
>ref|XP_003631582.1| PREDICTED: probable ribosome-binding factor A, chloroplastic
isoform 2 [Vitis vinifera]
Length = 215
Score = 239 bits (609), Expect = 2e-60
Identities = 125/142 (88%), Positives = 136/142 (95%)
Frame = -3
Query: 926 SIKCMANPRRVKMVAKQIRRELSDMLLTDKVLQYAILPEAALGADRYLSSLTTISDVEVS 747
+++CMAN RRVKMVAKQIRRELSDMLLTDKVLQ+A+LPEAALGADRYLSSLTTISDVEVS
Sbjct: 54 TVRCMANQRRVKMVAKQIRRELSDMLLTDKVLQFAVLPEAALGADRYLSSLTTISDVEVS 113
Query: 746 ADLQVVKVYVSVFGDERGKEVAISGLKSKAKYVRGELGRRMKLRLTPEIRFIEDESLERG 567
ADLQVVKVYVSVFGDE+GKEVAI+GLKSKAKYVR ELGRRMKLRLTPEIRF+EDESLERG
Sbjct: 114 ADLQVVKVYVSVFGDEKGKEVAIAGLKSKAKYVRSELGRRMKLRLTPEIRFVEDESLERG 173
Query: 566 SRVIAILDKIKKENEEKMTKSE 501
SRVIAILD+IK NE+KM S+
Sbjct: 174 SRVIAILDRIK--NEKKMAGSQ 193
>ref|XP_002270280.1| PREDICTED: probable ribosome-binding factor A, chloroplastic
isoform 1 [Vitis vinifera]
Length = 223
Score = 239 bits (609), Expect = 2e-60
Identities = 125/142 (88%), Positives = 136/142 (95%)
Frame = -3
Query: 926 SIKCMANPRRVKMVAKQIRRELSDMLLTDKVLQYAILPEAALGADRYLSSLTTISDVEVS 747
+++CMAN RRVKMVAKQIRRELSDMLLTDKVLQ+A+LPEAALGADRYLSSLTTISDVEVS
Sbjct: 54 TVRCMANQRRVKMVAKQIRRELSDMLLTDKVLQFAVLPEAALGADRYLSSLTTISDVEVS 113
Query: 746 ADLQVVKVYVSVFGDERGKEVAISGLKSKAKYVRGELGRRMKLRLTPEIRFIEDESLERG 567
ADLQVVKVYVSVFGDE+GKEVAI+GLKSKAKYVR ELGRRMKLRLTPEIRF+EDESLERG
Sbjct: 114 ADLQVVKVYVSVFGDEKGKEVAIAGLKSKAKYVRSELGRRMKLRLTPEIRFVEDESLERG 173
Query: 566 SRVIAILDKIKKENEEKMTKSE 501
SRVIAILD+IK NE+KM S+
Sbjct: 174 SRVIAILDRIK--NEKKMAGSQ 193
>gb|EXB61806.1| putative ribosome-binding factor A [Morus notabilis]
Length = 225
Score = 238 bits (607), Expect = 4e-60
Identities = 134/196 (68%), Positives = 151/196 (77%)
Frame = -3
Query: 1088 PQLLLLHHPSTVTTCSIMNFRRLRPQISSLKSVTVLQPAVQFPGARAGIFWGRCSIKCMA 909
P L H PS+ ++ S+ + L + +L+S + PA GA I+CMA
Sbjct: 13 PSLSHRHAPSSTSSSSVSSTSSLSFRFRTLRSTARIHPASH--GA---------VIRCMA 61
Query: 908 NPRRVKMVAKQIRRELSDMLLTDKVLQYAILPEAALGADRYLSSLTTISDVEVSADLQVV 729
PRRV MVAKQIRRELSDMLLTD LQYAILPEAALGADRYLSSLTTISDVEVS+DLQVV
Sbjct: 62 KPRRVAMVAKQIRRELSDMLLTDTTLQYAILPEAALGADRYLSSLTTISDVEVSSDLQVV 121
Query: 728 KVYVSVFGDERGKEVAISGLKSKAKYVRGELGRRMKLRLTPEIRFIEDESLERGSRVIAI 549
KVYVSVFGDER KEVA++GLKSKAKYVR ELGRRMKLRLTPEIRFIEDESLERGSRVIAI
Sbjct: 122 KVYVSVFGDERRKEVALAGLKSKAKYVRSELGRRMKLRLTPEIRFIEDESLERGSRVIAI 181
Query: 548 LDKIKKENEEKMTKSE 501
LDKIK E + + + +
Sbjct: 182 LDKIKNEKKTAVIEDD 197
>ref|XP_006412190.1| hypothetical protein EUTSA_v10026220mg [Eutrema salsugineum]
gi|557113360|gb|ESQ53643.1| hypothetical protein
EUTSA_v10026220mg [Eutrema salsugineum]
Length = 214
Score = 238 bits (607), Expect = 4e-60
Identities = 138/193 (71%), Positives = 153/193 (79%), Gaps = 5/193 (2%)
Frame = -3
Query: 1091 MPQLLLLHHPSTVTTCSIMNFRRLRPQISSLKSVTVLQPAVQFPG--ARAGIFWG---RC 927
MP +L HH + F L P IS+++S T + QFP A A I R
Sbjct: 1 MPGVLHTHHSTF--------FFPLHPPISTVRSKT---QSFQFPQPLAPANIRTNLSVRR 49
Query: 926 SIKCMANPRRVKMVAKQIRRELSDMLLTDKVLQYAILPEAALGADRYLSSLTTISDVEVS 747
S+KCMANPRRVKMVAKQI RELSDMLLTD VLQ+A+LPEAALGADRYLSSLTTISDVEVS
Sbjct: 50 SVKCMANPRRVKMVAKQIMRELSDMLLTDTVLQHAVLPEAALGADRYLSSLTTISDVEVS 109
Query: 746 ADLQVVKVYVSVFGDERGKEVAISGLKSKAKYVRGELGRRMKLRLTPEIRFIEDESLERG 567
DLQVVKVYVSVFGD+RGK+VAI+GLKSKAKYVR ELG+RMKLRLTPE+RFIEDES+ERG
Sbjct: 110 NDLQVVKVYVSVFGDDRGKDVAIAGLKSKAKYVRSELGKRMKLRLTPEVRFIEDESMERG 169
Query: 566 SRVIAILDKIKKE 528
SRVIAILDKIK E
Sbjct: 170 SRVIAILDKIKAE 182
>ref|XP_003527611.1| PREDICTED: probable ribosome-binding factor A, chloroplastic-like
[Glycine max]
Length = 255
Score = 237 bits (604), Expect = 8e-60
Identities = 130/198 (65%), Positives = 156/198 (78%), Gaps = 2/198 (1%)
Frame = -3
Query: 1085 QLLLLHHPSTVTTCSIMNFRRLRPQISSLKSVTVLQPAVQFPGAR--AGIFWGRCSIKCM 912
++ +LH + + +C R ++ S + + AV P R A + G I+CM
Sbjct: 35 EIAMLHPAALIASCPYPYPYPGRHELPSASASATARVAVPMPNLRGKAVVGVGSRMIRCM 94
Query: 911 ANPRRVKMVAKQIRRELSDMLLTDKVLQYAILPEAALGADRYLSSLTTISDVEVSADLQV 732
ANPRRV+MVAKQIRRELS MLLTDKVLQYA+LPEA+LGADRYLSSLTTI+DV+VSADLQV
Sbjct: 95 ANPRRVQMVAKQIRRELSHMLLTDKVLQYAVLPEASLGADRYLSSLTTITDVQVSADLQV 154
Query: 731 VKVYVSVFGDERGKEVAISGLKSKAKYVRGELGRRMKLRLTPEIRFIEDESLERGSRVIA 552
VKVYVSVFGDERGKEVAI+GLKSKAKYVR ELG+R+KLRLTPEIRF+ED+S ERGSRVIA
Sbjct: 155 VKVYVSVFGDERGKEVAIAGLKSKAKYVRSELGKRIKLRLTPEIRFLEDDSFERGSRVIA 214
Query: 551 ILDKIKKENEEKMTKSEV 498
ILDKIK N++ K+E+
Sbjct: 215 ILDKIK--NDKSQYKAEL 230
>gb|ESW07903.1| hypothetical protein PHAVU_009G002100g [Phaseolus vulgaris]
Length = 214
Score = 235 bits (599), Expect = 3e-59
Identities = 128/195 (65%), Positives = 152/195 (77%), Gaps = 6/195 (3%)
Frame = -3
Query: 1067 HPSTVTTCSIMNFRRLRPQISSLKSVTVLQPAVQFPGARAGIFWGRCSIKCMANPRRVKM 888
HP+ V +C +N R +VTV ++ +A + I+CMANPRRV+M
Sbjct: 3 HPALVASCPCLNPYPWRHHFPGAGTVTVRMTPMRIVREKAVV---GSRIRCMANPRRVQM 59
Query: 887 VAKQIRRELSDMLLTDKVLQYAILPEAALGADRYLSSLTTISDVEVSADLQVVKVYVSVF 708
VAKQIRRELSDMLLTDKVLQYAILPE +LGADRYLSSLTTI+DV+VS DLQVVKV+VSVF
Sbjct: 60 VAKQIRRELSDMLLTDKVLQYAILPETSLGADRYLSSLTTITDVQVSGDLQVVKVFVSVF 119
Query: 707 GDERGKEVAISGLKSKAKYVRGELGRRMKLRLTPEIRFIEDESLERGSRVIAILDKIKKE 528
GDERG+EVAI+GLKSKAKYVR ELG+RMKLRLTPEIRF+ED+S E+GSRVIAILDKIK E
Sbjct: 120 GDERGREVAIAGLKSKAKYVRSELGKRMKLRLTPEIRFLEDDSFEKGSRVIAILDKIKNE 179
Query: 527 ------NEEKMTKSE 501
N+E++ S+
Sbjct: 180 KSSGSQNKEQLDSSK 194
>ref|XP_004151338.1| PREDICTED: probable ribosome-binding factor A, chloroplastic-like
[Cucumis sativus] gi|449529960|ref|XP_004171965.1|
PREDICTED: probable ribosome-binding factor A,
chloroplastic-like [Cucumis sativus]
Length = 225
Score = 233 bits (595), Expect = 9e-59
Identities = 126/171 (73%), Positives = 144/171 (84%)
Frame = -3
Query: 1031 FRRLRPQISSLKSVTVLQPAVQFPGARAGIFWGRCSIKCMANPRRVKMVAKQIRRELSDM 852
F+ RP + S SVT+L P GA +I+CMAN RR+KMVAKQI+RELSDM
Sbjct: 30 FQASRPCVYSPTSVTLLPPPPVMRGA---------TIRCMANSRRIKMVAKQIQRELSDM 80
Query: 851 LLTDKVLQYAILPEAALGADRYLSSLTTISDVEVSADLQVVKVYVSVFGDERGKEVAISG 672
LLTDKVLQ+AILPEA+LGAD+YLSSLTTI+DVEVSADLQVVKVYVSVFGDERGK+VAI+G
Sbjct: 81 LLTDKVLQFAILPEASLGADKYLSSLTTITDVEVSADLQVVKVYVSVFGDERGKDVAIAG 140
Query: 671 LKSKAKYVRGELGRRMKLRLTPEIRFIEDESLERGSRVIAILDKIKKENEE 519
LKSKAKYVR LG+RMKLRLTPEIRFIEDES ERGSRVIAILD+IK + ++
Sbjct: 141 LKSKAKYVRSVLGKRMKLRLTPEIRFIEDESFERGSRVIAILDRIKDKKKD 191
>ref|XP_003604015.1| hypothetical protein MTR_3g117600 [Medicago truncatula]
gi|355493063|gb|AES74266.1| hypothetical protein
MTR_3g117600 [Medicago truncatula]
Length = 229
Score = 233 bits (593), Expect = 1e-58
Identities = 118/144 (81%), Positives = 131/144 (90%)
Frame = -3
Query: 932 RCSIKCMANPRRVKMVAKQIRRELSDMLLTDKVLQYAILPEAALGADRYLSSLTTISDVE 753
R +IKCMANPRRVKMVAKQIRRELSDML+TD VLQ+A+LPEA+LGAD YLSS+TTI+DVE
Sbjct: 48 RITIKCMANPRRVKMVAKQIRRELSDMLITDNVLQFAVLPEASLGADLYLSSVTTITDVE 107
Query: 752 VSADLQVVKVYVSVFGDERGKEVAISGLKSKAKYVRGELGRRMKLRLTPEIRFIEDESLE 573
++ADLQV +VYVSVFGDERGKEVA++GLKSKAKYVRGELGRRMKLRLTPEIRF+EDES E
Sbjct: 108 ITADLQVARVYVSVFGDERGKEVAMAGLKSKAKYVRGELGRRMKLRLTPEIRFLEDESFE 167
Query: 572 RGSRVIAILDKIKKENEEKMTKSE 501
RGSRVIAILDKIK E E E
Sbjct: 168 RGSRVIAILDKIKNEKSETSKNME 191
>ref|XP_004290346.1| PREDICTED: probable ribosome-binding factor A, chloroplastic-like
[Fragaria vesca subsp. vesca]
Length = 215
Score = 232 bits (592), Expect = 2e-58
Identities = 120/134 (89%), Positives = 128/134 (95%)
Frame = -3
Query: 923 IKCMANPRRVKMVAKQIRRELSDMLLTDKVLQYAILPEAALGADRYLSSLTTISDVEVSA 744
I+CMA PRRV MVAKQI+RELSDMLLTDKVLQYAILPE +LGADRYLSSLTTISDVEVS
Sbjct: 47 IRCMAKPRRVAMVAKQIQRELSDMLLTDKVLQYAILPEVSLGADRYLSSLTTISDVEVST 106
Query: 743 DLQVVKVYVSVFGDERGKEVAISGLKSKAKYVRGELGRRMKLRLTPEIRFIEDESLERGS 564
DLQVVKV+VSVFGDERGKEVA++GLKSKAKYVRGELGRRMKLRLTPEIRFIEDESLERGS
Sbjct: 107 DLQVVKVFVSVFGDERGKEVALAGLKSKAKYVRGELGRRMKLRLTPEIRFIEDESLERGS 166
Query: 563 RVIAILDKIKKENE 522
RVIAILD+IK E +
Sbjct: 167 RVIAILDRIKNEKK 180
>ref|XP_006284501.1| hypothetical protein CARUB_v10005701mg [Capsella rubella]
gi|482553206|gb|EOA17399.1| hypothetical protein
CARUB_v10005701mg [Capsella rubella]
Length = 219
Score = 230 bits (587), Expect = 7e-58
Identities = 118/135 (87%), Positives = 129/135 (95%)
Frame = -3
Query: 932 RCSIKCMANPRRVKMVAKQIRRELSDMLLTDKVLQYAILPEAALGADRYLSSLTTISDVE 753
R S++CMANPRRVKMVAKQI RELSDMLLTD VLQ+A+LPEAALGADRYLSSLTTISDVE
Sbjct: 48 RRSVRCMANPRRVKMVAKQIMRELSDMLLTDTVLQHAVLPEAALGADRYLSSLTTISDVE 107
Query: 752 VSADLQVVKVYVSVFGDERGKEVAISGLKSKAKYVRGELGRRMKLRLTPEIRFIEDESLE 573
VS DLQVVKVYVSVFGD+RGK+VAI+GLKSKAKYVR ELG+RMKLRLTPE+RFIEDES+E
Sbjct: 108 VSNDLQVVKVYVSVFGDDRGKDVAIAGLKSKAKYVRSELGKRMKLRLTPEVRFIEDESME 167
Query: 572 RGSRVIAILDKIKKE 528
RGSRVIAILDK+K E
Sbjct: 168 RGSRVIAILDKLKAE 182
>ref|NP_195199.2| ribosome-binding factor A [Arabidopsis thaliana]
gi|78099793|sp|O65693.2|RBFA_ARATH RecName:
Full=Probable ribosome-binding factor A, chloroplastic;
Flags: Precursor gi|25082957|gb|AAN72022.1| putative
protein [Arabidopsis thaliana]
gi|30023650|gb|AAP13358.1| At4g34730 [Arabidopsis
thaliana] gi|332661016|gb|AEE86416.1| ribosome-binding
factor A [Arabidopsis thaliana]
Length = 215
Score = 230 bits (586), Expect = 1e-57
Identities = 119/144 (82%), Positives = 132/144 (91%)
Frame = -3
Query: 932 RCSIKCMANPRRVKMVAKQIRRELSDMLLTDKVLQYAILPEAALGADRYLSSLTTISDVE 753
R +++CMANPRRVKMVAKQI RELSDMLLTD VLQ+A+LPEAALGADRYLSSLTTISDVE
Sbjct: 48 RRTVRCMANPRRVKMVAKQIMRELSDMLLTDTVLQHAVLPEAALGADRYLSSLTTISDVE 107
Query: 752 VSADLQVVKVYVSVFGDERGKEVAISGLKSKAKYVRGELGRRMKLRLTPEIRFIEDESLE 573
VS DLQVVKVYVSVFGD+RGK+VAI+GLKSKAKYVR ELG+RMKLRLTPE+RFIEDE++E
Sbjct: 108 VSNDLQVVKVYVSVFGDDRGKDVAIAGLKSKAKYVRSELGKRMKLRLTPEVRFIEDEAME 167
Query: 572 RGSRVIAILDKIKKENEEKMTKSE 501
RGSRVIAILDKIK E K+E
Sbjct: 168 RGSRVIAILDKIKAEKGSGEGKTE 191
>ref|XP_002867105.1| hypothetical protein ARALYDRAFT_353351 [Arabidopsis lyrata subsp.
lyrata] gi|297312941|gb|EFH43364.1| hypothetical protein
ARALYDRAFT_353351 [Arabidopsis lyrata subsp. lyrata]
Length = 787
Score = 227 bits (578), Expect = 8e-57
Identities = 117/130 (90%), Positives = 125/130 (96%)
Frame = -3
Query: 917 CMANPRRVKMVAKQIRRELSDMLLTDKVLQYAILPEAALGADRYLSSLTTISDVEVSADL 738
CMANPRRVKMVAKQI RELSDMLLTD VLQ+A+LPEAALGADRYLSSLTTISDVEVS DL
Sbjct: 560 CMANPRRVKMVAKQIMRELSDMLLTDTVLQHAVLPEAALGADRYLSSLTTISDVEVSNDL 619
Query: 737 QVVKVYVSVFGDERGKEVAISGLKSKAKYVRGELGRRMKLRLTPEIRFIEDESLERGSRV 558
QVVKVYVSVFGD+RGK+VAI+GLKSKAKYVR ELG+RMKLRLTPE+RFIEDES+ERGSRV
Sbjct: 620 QVVKVYVSVFGDDRGKDVAIAGLKSKAKYVRSELGKRMKLRLTPEVRFIEDESMERGSRV 679
Query: 557 IAILDKIKKE 528
IAILDKIK E
Sbjct: 680 IAILDKIKAE 689