BLASTX nr result

ID: Catharanthus23_contig00011241 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00011241
         (486 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004252138.1| PREDICTED: disease resistance protein At4g27...    57   3e-06
ref|XP_006362283.1| PREDICTED: probable disease resistance prote...    55   1e-05

>ref|XP_004252138.1| PREDICTED: disease resistance protein At4g27190-like [Solanum
            lycopersicum]
          Length = 944

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 47/152 (30%), Positives = 77/152 (50%), Gaps = 5/152 (3%)
 Frame = -3

Query: 484  GFLSGLVQLEELILIGTFYDWWEDEETXXXNASLAELDSLSHLTTLCV-----DINNPNA 320
            G LS LV+LEEL ++G               ++L++L+SLS LTTL +     D+   N 
Sbjct: 609  GVLSRLVRLEELHMMGV---------RECGYSTLSDLESLSRLTTLTLSHCSRDVIYSNL 659

Query: 319  IPKMKPHWVHKLKIYSMIVARPDFIDSDILRFQKSIWLGDREVTPLRDWFYDHLVREAKY 140
            +   K    + LK+    + R D+         K I L   E TPL DW   HL++E+++
Sbjct: 660  VLPSKLTQ-YALKVGEATLQRDDY--------NKKIALEVMETTPLGDWIC-HLLKESEF 709

Query: 139  LNLSGSVCVDVFNKLIPSGYKNLTCLRIYRFN 44
            + L+G    +V  +L  + ++N+ CLR++  N
Sbjct: 710  VYLTGMGSNNVLTELQLNEFQNMKCLRLFNCN 741


>ref|XP_006362283.1| PREDICTED: probable disease resistance protein At4g27220-like
           [Solanum tuberosum]
          Length = 856

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 47/147 (31%), Positives = 78/147 (53%)
 Frame = -3

Query: 484 GFLSGLVQLEELILIGTFYDWWEDEETXXXNASLAELDSLSHLTTLCVDINNPNAIPKMK 305
           G LS LV+LEEL ++G      ED       ++L EL+SLS LT L +   + + I    
Sbjct: 483 GVLSSLVRLEELHMVGV-----ED----CSYSTLTELESLSRLTALTLSDCSRDVIYN-N 532

Query: 304 PHWVHKLKIYSMIVARPDFIDSDILRFQKSIWLGDREVTPLRDWFYDHLVREAKYLNLSG 125
                KL  Y++ V       S +  ++K+I L   E  PL DW   HL++E+++++ SG
Sbjct: 533 LSLCSKLTRYALKVGGAT---SRLDDYKKNIALEVTETIPLGDWIC-HLLKESEFVDSSG 588

Query: 124 SVCVDVFNKLIPSGYKNLTCLRIYRFN 44
               +V  +L  + ++N+ CLR+ +F+
Sbjct: 589 KGSHNVLTELQLNEFQNVKCLRLSKFD 615


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