BLASTX nr result
ID: Catharanthus23_contig00011228
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00011228
(225 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMJ12275.1| hypothetical protein PRUPE_ppa017205mg, partial [... 73 5e-21
ref|XP_006344998.1| PREDICTED: pentatricopeptide repeat-containi... 74 3e-20
ref|XP_004236153.1| PREDICTED: pentatricopeptide repeat-containi... 74 4e-20
ref|XP_006439730.1| hypothetical protein CICLE_v10019863mg [Citr... 73 1e-19
gb|EOY20581.1| Pentatricopeptide repeat superfamily protein isof... 74 3e-19
ref|XP_004301284.1| PREDICTED: pentatricopeptide repeat-containi... 69 3e-19
gb|EOY20582.1| Pentatricopeptide repeat (PPR) superfamily protei... 74 3e-19
emb|CBI15095.3| unnamed protein product [Vitis vinifera] 71 5e-19
ref|XP_003634254.1| PREDICTED: pentatricopeptide repeat-containi... 71 5e-19
ref|XP_006476683.1| PREDICTED: pentatricopeptide repeat-containi... 71 7e-19
ref|XP_004501962.1| PREDICTED: pentatricopeptide repeat-containi... 70 6e-18
gb|EXC32244.1| hypothetical protein L484_004747 [Morus notabilis] 69 2e-17
ref|XP_004152457.1| PREDICTED: pentatricopeptide repeat-containi... 68 2e-17
ref|XP_002511467.1| pentatricopeptide repeat-containing protein,... 66 2e-17
ref|XP_002321560.2| pentatricopeptide repeat-containing family p... 65 8e-17
ref|XP_006647686.1| PREDICTED: pentatricopeptide repeat-containi... 66 3e-14
gb|AFW72799.1| hypothetical protein ZEAMMB73_717335 [Zea mays] 65 3e-14
ref|XP_003572818.1| PREDICTED: pentatricopeptide repeat-containi... 66 7e-14
gb|EPS67440.1| hypothetical protein M569_07334, partial [Genlise... 60 7e-14
gb|EMT22252.1| hypothetical protein F775_04062 [Aegilops tauschii] 64 7e-14
>gb|EMJ12275.1| hypothetical protein PRUPE_ppa017205mg, partial [Prunus persica]
Length = 403
Score = 73.2 bits (178), Expect(2) = 5e-21
Identities = 30/47 (63%), Positives = 40/47 (85%)
Frame = -2
Query: 224 VLCKKDDLENGILVFHEMLRKGYIPNVTTYTVIVRGRCNDGKMDRAI 84
VLCKKD +EN +LVF EM+ KGY+PNVTTY+V++RG C+ G M+RA+
Sbjct: 231 VLCKKDSVENAVLVFEEMMSKGYVPNVTTYSVLIRGLCHAGNMERAM 277
Score = 53.5 bits (127), Expect(2) = 5e-21
Identities = 21/27 (77%), Positives = 25/27 (92%)
Frame = -3
Query: 82 EYMERMKDNRCEANVQTYNVIIRYYCD 2
EYMERMKD++CE NVQ YNV+IRY+CD
Sbjct: 278 EYMERMKDDKCEPNVQIYNVVIRYFCD 304
>ref|XP_006344998.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like isoform X1 [Solanum tuberosum]
gi|565356286|ref|XP_006344999.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like isoform X2 [Solanum tuberosum]
gi|565356288|ref|XP_006345000.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like isoform X3 [Solanum tuberosum]
Length = 486
Score = 73.9 bits (180), Expect(2) = 3e-20
Identities = 31/47 (65%), Positives = 39/47 (82%)
Frame = -2
Query: 224 VLCKKDDLENGILVFHEMLRKGYIPNVTTYTVIVRGRCNDGKMDRAI 84
V+CKKD +EN IL+F+EMLRKGY+PN TTY I+RG C+ GKMD A+
Sbjct: 314 VMCKKDSVENAILIFNEMLRKGYLPNATTYNAIIRGLCHVGKMDNAM 360
Score = 50.1 bits (118), Expect(2) = 3e-20
Identities = 19/27 (70%), Positives = 24/27 (88%)
Frame = -3
Query: 82 EYMERMKDNRCEANVQTYNVIIRYYCD 2
EYM++M ++ CE NVQTYNV+IRYYCD
Sbjct: 361 EYMDKMNEDGCEPNVQTYNVVIRYYCD 387
>ref|XP_004236153.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Solanum lycopersicum]
Length = 492
Score = 73.6 bits (179), Expect(2) = 4e-20
Identities = 32/47 (68%), Positives = 38/47 (80%)
Frame = -2
Query: 224 VLCKKDDLENGILVFHEMLRKGYIPNVTTYTVIVRGRCNDGKMDRAI 84
V+CKKD EN ILVF+EMLRKGY+PN TTY I+RG C+ GKMD A+
Sbjct: 320 VMCKKDSTENAILVFNEMLRKGYLPNATTYNAIIRGLCHVGKMDNAM 366
Score = 50.1 bits (118), Expect(2) = 4e-20
Identities = 19/27 (70%), Positives = 24/27 (88%)
Frame = -3
Query: 82 EYMERMKDNRCEANVQTYNVIIRYYCD 2
EYM++M ++ CE NVQTYNV+IRYYCD
Sbjct: 367 EYMDKMNEDGCEPNVQTYNVVIRYYCD 393
>ref|XP_006439730.1| hypothetical protein CICLE_v10019863mg [Citrus clementina]
gi|557541992|gb|ESR52970.1| hypothetical protein
CICLE_v10019863mg [Citrus clementina]
Length = 493
Score = 73.2 bits (178), Expect(2) = 1e-19
Identities = 31/47 (65%), Positives = 40/47 (85%)
Frame = -2
Query: 224 VLCKKDDLENGILVFHEMLRKGYIPNVTTYTVIVRGRCNDGKMDRAI 84
VLCKKD +EN ILVF EM+RKGY+PN TTY V++RG C+ G+M+RA+
Sbjct: 321 VLCKKDSVENAILVFEEMVRKGYMPNSTTYNVVIRGLCHAGEMERAL 367
Score = 48.5 bits (114), Expect(2) = 1e-19
Identities = 18/27 (66%), Positives = 24/27 (88%)
Frame = -3
Query: 82 EYMERMKDNRCEANVQTYNVIIRYYCD 2
E++ RMKD+ CE NVQTYN++IRY+CD
Sbjct: 368 EFVGRMKDDECEPNVQTYNILIRYFCD 394
>gb|EOY20581.1| Pentatricopeptide repeat superfamily protein isoform 1 [Theobroma
cacao] gi|508773328|gb|EOY20584.1| Pentatricopeptide
repeat superfamily protein isoform 1 [Theobroma cacao]
Length = 491
Score = 73.6 bits (179), Expect(2) = 3e-19
Identities = 33/47 (70%), Positives = 39/47 (82%)
Frame = -2
Query: 224 VLCKKDDLENGILVFHEMLRKGYIPNVTTYTVIVRGRCNDGKMDRAI 84
VLCKKD +EN ILVF EMLRKGY+PN TTY V++RG C+ +MDRAI
Sbjct: 319 VLCKKDCVENAILVFEEMLRKGYVPNSTTYNVVIRGLCHKEQMDRAI 365
Score = 47.0 bits (110), Expect(2) = 3e-19
Identities = 16/27 (59%), Positives = 24/27 (88%)
Frame = -3
Query: 82 EYMERMKDNRCEANVQTYNVIIRYYCD 2
E+M++M+D+ C NVQTYN++IRY+CD
Sbjct: 366 EFMDKMRDDECGPNVQTYNIVIRYFCD 392
>ref|XP_004301284.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 489
Score = 69.3 bits (168), Expect(2) = 3e-19
Identities = 29/44 (65%), Positives = 36/44 (81%)
Frame = -2
Query: 224 VLCKKDDLENGILVFHEMLRKGYIPNVTTYTVIVRGRCNDGKMD 93
VLCKKD +EN ++VF EM+ KGY+PNVTTY V+VRG C+ G MD
Sbjct: 317 VLCKKDSVENAVVVFEEMVSKGYVPNVTTYNVLVRGLCHAGNMD 360
Score = 51.2 bits (121), Expect(2) = 3e-19
Identities = 21/27 (77%), Positives = 24/27 (88%)
Frame = -3
Query: 82 EYMERMKDNRCEANVQTYNVIIRYYCD 2
E MERMKD+ CE NVQTYNV+IRY+CD
Sbjct: 364 ELMERMKDDDCEPNVQTYNVVIRYFCD 390
>gb|EOY20582.1| Pentatricopeptide repeat (PPR) superfamily protein isoform 2
[Theobroma cacao] gi|508773327|gb|EOY20583.1|
Pentatricopeptide repeat (PPR) superfamily protein
isoform 2 [Theobroma cacao]
Length = 413
Score = 73.6 bits (179), Expect(2) = 3e-19
Identities = 33/47 (70%), Positives = 39/47 (82%)
Frame = -2
Query: 224 VLCKKDDLENGILVFHEMLRKGYIPNVTTYTVIVRGRCNDGKMDRAI 84
VLCKKD +EN ILVF EMLRKGY+PN TTY V++RG C+ +MDRAI
Sbjct: 319 VLCKKDCVENAILVFEEMLRKGYVPNSTTYNVVIRGLCHKEQMDRAI 365
Score = 47.0 bits (110), Expect(2) = 3e-19
Identities = 16/27 (59%), Positives = 24/27 (88%)
Frame = -3
Query: 82 EYMERMKDNRCEANVQTYNVIIRYYCD 2
E+M++M+D+ C NVQTYN++IRY+CD
Sbjct: 366 EFMDKMRDDECGPNVQTYNIVIRYFCD 392
>emb|CBI15095.3| unnamed protein product [Vitis vinifera]
Length = 815
Score = 70.9 bits (172), Expect(2) = 5e-19
Identities = 30/47 (63%), Positives = 40/47 (85%)
Frame = -2
Query: 224 VLCKKDDLENGILVFHEMLRKGYIPNVTTYTVIVRGRCNDGKMDRAI 84
VLCKKD++EN I VF EMLRKGY+PN TTY V++RG C+ G+M++A+
Sbjct: 270 VLCKKDNVENAISVFEEMLRKGYMPNSTTYNVVIRGLCHVGRMEKAM 316
Score = 48.9 bits (115), Expect(2) = 5e-19
Identities = 19/27 (70%), Positives = 23/27 (85%)
Frame = -3
Query: 82 EYMERMKDNRCEANVQTYNVIIRYYCD 2
E+M RMKD+ CE NVQ YNV+IRY+CD
Sbjct: 317 EFMARMKDDECEPNVQIYNVVIRYFCD 343
>ref|XP_003634254.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Vitis vinifera]
Length = 450
Score = 70.9 bits (172), Expect(2) = 5e-19
Identities = 30/47 (63%), Positives = 40/47 (85%)
Frame = -2
Query: 224 VLCKKDDLENGILVFHEMLRKGYIPNVTTYTVIVRGRCNDGKMDRAI 84
VLCKKD++EN I VF EMLRKGY+PN TTY V++RG C+ G+M++A+
Sbjct: 278 VLCKKDNVENAISVFEEMLRKGYMPNSTTYNVVIRGLCHVGRMEKAM 324
Score = 48.9 bits (115), Expect(2) = 5e-19
Identities = 19/27 (70%), Positives = 23/27 (85%)
Frame = -3
Query: 82 EYMERMKDNRCEANVQTYNVIIRYYCD 2
E+M RMKD+ CE NVQ YNV+IRY+CD
Sbjct: 325 EFMARMKDDECEPNVQIYNVVIRYFCD 351
>ref|XP_006476683.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like isoform X1 [Citrus sinensis]
gi|568845657|ref|XP_006476684.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like isoform X2 [Citrus sinensis]
Length = 493
Score = 70.9 bits (172), Expect(2) = 7e-19
Identities = 30/47 (63%), Positives = 39/47 (82%)
Frame = -2
Query: 224 VLCKKDDLENGILVFHEMLRKGYIPNVTTYTVIVRGRCNDGKMDRAI 84
VLCKKD +EN ILVF EM+ KGY+PN TTY V++RG C+ G+M+RA+
Sbjct: 321 VLCKKDSVENAILVFEEMVGKGYMPNSTTYNVVIRGLCHTGEMERAL 367
Score = 48.5 bits (114), Expect(2) = 7e-19
Identities = 18/27 (66%), Positives = 24/27 (88%)
Frame = -3
Query: 82 EYMERMKDNRCEANVQTYNVIIRYYCD 2
E++ RMKD+ CE NVQTYN++IRY+CD
Sbjct: 368 EFVGRMKDDECEPNVQTYNILIRYFCD 394
>ref|XP_004501962.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Cicer arietinum]
Length = 498
Score = 70.5 bits (171), Expect(2) = 6e-18
Identities = 27/47 (57%), Positives = 41/47 (87%)
Frame = -2
Query: 224 VLCKKDDLENGILVFHEMLRKGYIPNVTTYTVIVRGRCNDGKMDRAI 84
VLCKKD+++N +LVF EM+ KGY+PN+TTY V++RG C+ G+M++A+
Sbjct: 326 VLCKKDNVQNALLVFEEMVGKGYVPNLTTYNVVIRGLCHSGEMEKAL 372
Score = 45.8 bits (107), Expect(2) = 6e-18
Identities = 17/27 (62%), Positives = 24/27 (88%)
Frame = -3
Query: 82 EYMERMKDNRCEANVQTYNVIIRYYCD 2
E+MERM+++ C +VQTYNV+IRY+CD
Sbjct: 373 EFMERMEEHGCRPSVQTYNVVIRYFCD 399
>gb|EXC32244.1| hypothetical protein L484_004747 [Morus notabilis]
Length = 521
Score = 68.9 bits (167), Expect(2) = 2e-17
Identities = 29/47 (61%), Positives = 40/47 (85%)
Frame = -2
Query: 224 VLCKKDDLENGILVFHEMLRKGYIPNVTTYTVIVRGRCNDGKMDRAI 84
VLCKKD +EN ++VF EM+ KG +PNVTTYTV+VRG C+ G+M+R++
Sbjct: 310 VLCKKDSVENAVVVFEEMVGKGCVPNVTTYTVLVRGLCHAGQMERSM 356
Score = 45.8 bits (107), Expect(2) = 2e-17
Identities = 17/27 (62%), Positives = 23/27 (85%)
Frame = -3
Query: 82 EYMERMKDNRCEANVQTYNVIIRYYCD 2
E++ERMK + CE NVQ YN++IRY+CD
Sbjct: 357 EFVERMKGDGCEPNVQIYNIVIRYFCD 383
>ref|XP_004152457.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Cucumis sativus]
gi|449487784|ref|XP_004157799.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Cucumis sativus]
Length = 502
Score = 67.8 bits (164), Expect(2) = 2e-17
Identities = 27/47 (57%), Positives = 39/47 (82%)
Frame = -2
Query: 224 VLCKKDDLENGILVFHEMLRKGYIPNVTTYTVIVRGRCNDGKMDRAI 84
VLCKKD +EN +L+F EM++KGY+PN+TTY V++RG + G MD+A+
Sbjct: 331 VLCKKDSVENAVLMFEEMVKKGYVPNLTTYNVVIRGLFHAGNMDKAM 377
Score = 47.0 bits (110), Expect(2) = 2e-17
Identities = 19/27 (70%), Positives = 23/27 (85%)
Frame = -3
Query: 82 EYMERMKDNRCEANVQTYNVIIRYYCD 2
E++ERMK + CE NVQTYNV IRY+CD
Sbjct: 378 EFIERMKTDGCEPNVQTYNVAIRYFCD 404
>ref|XP_002511467.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223550582|gb|EEF52069.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 482
Score = 65.9 bits (159), Expect(2) = 2e-17
Identities = 25/47 (53%), Positives = 38/47 (80%)
Frame = -2
Query: 224 VLCKKDDLENGILVFHEMLRKGYIPNVTTYTVIVRGRCNDGKMDRAI 84
+LCKKD +EN IL+F EM+++GY+PN TY +++RG C+ G+M RA+
Sbjct: 310 ILCKKDSVENAILIFEEMVKRGYVPNSITYNLVIRGLCHVGEMQRAM 356
Score = 48.9 bits (115), Expect(2) = 2e-17
Identities = 19/27 (70%), Positives = 24/27 (88%)
Frame = -3
Query: 82 EYMERMKDNRCEANVQTYNVIIRYYCD 2
E MERM+D+ CE NVQTYN++IRY+CD
Sbjct: 357 ELMERMEDDDCEPNVQTYNILIRYFCD 383
>ref|XP_002321560.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550322291|gb|EEF05687.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 491
Score = 64.7 bits (156), Expect(2) = 8e-17
Identities = 25/47 (53%), Positives = 39/47 (82%)
Frame = -2
Query: 224 VLCKKDDLENGILVFHEMLRKGYIPNVTTYTVIVRGRCNDGKMDRAI 84
VLCKKD+++N I++F EM+ KGY+PN TY +++RG C+ G+M+RA+
Sbjct: 319 VLCKKDNVDNAIVIFEEMVVKGYVPNSITYNLVIRGLCHRGEMERAM 365
Score = 47.8 bits (112), Expect(2) = 8e-17
Identities = 18/27 (66%), Positives = 24/27 (88%)
Frame = -3
Query: 82 EYMERMKDNRCEANVQTYNVIIRYYCD 2
E+M RM+D+ CE NVQTYN++IRY+CD
Sbjct: 366 EFMGRMRDDGCEPNVQTYNLVIRYFCD 392
>ref|XP_006647686.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Oryza brachyantha]
Length = 495
Score = 65.9 bits (159), Expect(2) = 3e-14
Identities = 26/47 (55%), Positives = 39/47 (82%)
Frame = -2
Query: 224 VLCKKDDLENGILVFHEMLRKGYIPNVTTYTVIVRGRCNDGKMDRAI 84
V+CKK ++E+ ++VF +ML KGY+PNV TYTV++RG C+ GK+DR +
Sbjct: 322 VICKKANVEDAVMVFDDMLVKGYVPNVVTYTVLIRGLCHAGKIDRGL 368
Score = 38.1 bits (87), Expect(2) = 3e-14
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = -3
Query: 76 MERMKDNRCEANVQTYNVIIRYYC 5
+ERMK+ CE VQTYNV+IRY C
Sbjct: 371 LERMKNGGCEPVVQTYNVLIRYSC 394
>gb|AFW72799.1| hypothetical protein ZEAMMB73_717335 [Zea mays]
Length = 501
Score = 65.1 bits (157), Expect(2) = 3e-14
Identities = 28/47 (59%), Positives = 38/47 (80%)
Frame = -2
Query: 224 VLCKKDDLENGILVFHEMLRKGYIPNVTTYTVIVRGRCNDGKMDRAI 84
V CKK +LE+ + VF +M+RKGYIPNV TYTV++RG C+ GK+ RA+
Sbjct: 328 VTCKKGNLEDAVAVFDDMVRKGYIPNVVTYTVLIRGLCHAGKVVRAM 374
Score = 38.5 bits (88), Expect(2) = 3e-14
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = -3
Query: 100 KWIEQYEYMERMKDNRCEANVQTYNVIIRY 11
K + + ++RMK CE NVQTYNV+IRY
Sbjct: 369 KVVRAMKLLDRMKSEGCEPNVQTYNVLIRY 398
>ref|XP_003572818.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Brachypodium distachyon]
Length = 496
Score = 65.9 bits (159), Expect(2) = 7e-14
Identities = 27/47 (57%), Positives = 39/47 (82%)
Frame = -2
Query: 224 VLCKKDDLENGILVFHEMLRKGYIPNVTTYTVIVRGRCNDGKMDRAI 84
V+CKK ++E+ + VF +M+RK YIPNV TYTV++RG C+ GK+DRA+
Sbjct: 323 VICKKGNVEDAVTVFDDMIRKDYIPNVVTYTVLIRGLCHVGKIDRAM 369
Score = 36.6 bits (83), Expect(2) = 7e-14
Identities = 16/22 (72%), Positives = 18/22 (81%)
Frame = -3
Query: 76 MERMKDNRCEANVQTYNVIIRY 11
MERMK+ CE VQTYNV+IRY
Sbjct: 372 MERMKNEGCEPVVQTYNVLIRY 393
>gb|EPS67440.1| hypothetical protein M569_07334, partial [Genlisea aurea]
Length = 451
Score = 60.1 bits (144), Expect(2) = 7e-14
Identities = 26/47 (55%), Positives = 34/47 (72%)
Frame = -2
Query: 224 VLCKKDDLENGILVFHEMLRKGYIPNVTTYTVIVRGRCNDGKMDRAI 84
+LCKKD +EN + VF EM +KG PN TTY +++RG C+ GK D AI
Sbjct: 278 ILCKKDSVENAMKVFDEMQQKGTKPNATTYNLVIRGLCHVGKFDMAI 324
Score = 42.4 bits (98), Expect(2) = 7e-14
Identities = 18/28 (64%), Positives = 22/28 (78%), Gaps = 1/28 (3%)
Frame = -3
Query: 82 EYMERMKDNRC-EANVQTYNVIIRYYCD 2
EYM+RMK+N C QT+N+IIRYYCD
Sbjct: 325 EYMDRMKENGCCTPTFQTFNIIIRYYCD 352
>gb|EMT22252.1| hypothetical protein F775_04062 [Aegilops tauschii]
Length = 347
Score = 63.9 bits (154), Expect(2) = 7e-14
Identities = 25/47 (53%), Positives = 39/47 (82%)
Frame = -2
Query: 224 VLCKKDDLENGILVFHEMLRKGYIPNVTTYTVIVRGRCNDGKMDRAI 84
V+CKK ++E+ + VF +M+R+ Y+PNV TYTV++RG C+ GK+DRA+
Sbjct: 174 VICKKGNVEDAVTVFDDMVRQDYVPNVVTYTVLIRGLCHAGKIDRAM 220
Score = 38.5 bits (88), Expect(2) = 7e-14
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = -3
Query: 76 MERMKDNRCEANVQTYNVIIRY 11
MERMKD CE VQTYNV+IRY
Sbjct: 223 MERMKDEGCEPVVQTYNVLIRY 244