BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00011223
         (792 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006351972.1| PREDICTED: E3 ubiquitin-protein ligase COP1-...   383   e-104
ref|NP_001234047.1| COP1 homolog [Solanum lycopersicum] gi|40909...   379   e-103
gb|AAG31173.1| COP1 [Ipomoea nil]                                     365   7e-99
ref|XP_006447656.1| hypothetical protein CICLE_v10014491mg [Citr...   359   5e-97
gb|AAN86553.1| COP1 [Brassica rapa subsp. pekinensis]                 357   2e-96
gb|EOX93348.1| Transducin/WD40 repeat-like superfamily protein i...   355   8e-96
gb|EOX93347.1| Transducin/WD40 repeat-like superfamily protein i...   355   8e-96
gb|EOX93345.1| Transducin/WD40 repeat-like superfamily protein i...   355   8e-96
gb|EOX93344.1| Transducin/WD40 repeat-like superfamily protein i...   355   8e-96
gb|EXB72970.1| E3 ubiquitin-protein ligase COP1 [Morus notabilis]     349   5e-94
ref|XP_006293448.1| hypothetical protein CARUB_v10022726mg [Caps...   348   2e-93
ref|XP_002879425.1| hypothetical protein ARALYDRAFT_902362 [Arab...   347   3e-93
ref|XP_006410433.1| hypothetical protein EUTSA_v10016348mg [Eutr...   345   8e-93
gb|AFH57127.1| COP1 protein, partial [Beta vulgaris subsp. vulga...   345   8e-93
gb|AAA32772.1| regulatory protein [Arabidopsis thaliana]              343   3e-92
ref|NP_180854.1| E3 ubiquitin-protein ligase COP1 [Arabidopsis t...   343   5e-92
dbj|BAE98955.1| photomorphogenesis repressor [Arabidopsis thaliana]   343   5e-92
gb|ADL59932.1| constitutively photomorphogenic 1 [Brassica napus]     341   2e-91
gb|ADR72985.1| COP1 protein [Brassica rapa var. purpuraria] gi|3...   340   3e-91
gb|AEE81754.1| constitutively photomorphogenic 1 [Brassica rapa ...   339   6e-91

>ref|XP_006351972.1| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Solanum
           tuberosum]
          Length = 675

 Score =  383 bits (983), Expect = e-104
 Identities = 193/265 (72%), Positives = 216/265 (81%), Gaps = 23/265 (8%)
 Frame = -3

Query: 727 LDKDLLCPICMQIIKDAFLTSCGHSFCYMCIVTHLQNKSDCPCCSHYLTPSQLYPNFLLD 548
           LD++LLCPICMQIIKDAFLT+CGHSFCYMCIVTHL NKSDCPCCSHYLT SQLYPNFLLD
Sbjct: 43  LDRELLCPICMQIIKDAFLTACGHSFCYMCIVTHLHNKSDCPCCSHYLTTSQLYPNFLLD 102

Query: 547 KLLKKRSAVQNSKTASPVEQFRQSLQQGCEVSIKELDSLLMLLGEKKRKLEQEEAERNMQ 368
           KL+KK SA Q SKTASPVEQFR SL+QGCEVSIKELD+LL++L EKKRKLEQEEAERNMQ
Sbjct: 103 KLMKKTSARQISKTASPVEQFRHSLEQGCEVSIKELDALLLMLSEKKRKLEQEEAERNMQ 162

Query: 367 ILLDFLHILRKQKIDELNEIQNDLQYVKEDINAVERYRIDLYRARDR------------- 227
           ILLDFL +LRKQK+DEL+E+Q+DLQY+KED+N+VER+RIDLYRARDR             
Sbjct: 163 ILLDFLQMLRKQKVDELSEVQHDLQYIKEDLNSVERHRIDLYRARDRYSMKLRMLADDPI 222

Query: 226 ----------RTSSGLACSSRSVHGGLAAGNFQYKKGDSKPQFGSLGPQKKNASLSALNS 77
                     R   GL  +SR+  GGL  GN  YKK DSK Q  S GPQ+K+ S+S LNS
Sbjct: 223 GKKPWSSSTDRNFGGLFSTSRNAPGGLPTGNLTYKKVDSKAQISSPGPQRKDTSISELNS 282

Query: 76  QHMSQSGLAVVRKKRVHAQFNDLQE 2
           QHMSQSGLAVVRKKRV+AQFNDLQE
Sbjct: 283 QHMSQSGLAVVRKKRVNAQFNDLQE 307


>ref|NP_001234047.1| COP1 homolog [Solanum lycopersicum] gi|4090943|gb|AAC98912.1| COP1
           homolog [Solanum lycopersicum]
          Length = 677

 Score =  379 bits (972), Expect = e-103
 Identities = 192/265 (72%), Positives = 215/265 (81%), Gaps = 23/265 (8%)
 Frame = -3

Query: 727 LDKDLLCPICMQIIKDAFLTSCGHSFCYMCIVTHLQNKSDCPCCSHYLTPSQLYPNFLLD 548
           LD++LLCPICMQIIKDAFLT+CGHSFCYMCIVTHL NKSDCPCCSHYLT SQLYPNFLLD
Sbjct: 45  LDRELLCPICMQIIKDAFLTACGHSFCYMCIVTHLHNKSDCPCCSHYLTTSQLYPNFLLD 104

Query: 547 KLLKKRSAVQNSKTASPVEQFRQSLQQGCEVSIKELDSLLMLLGEKKRKLEQEEAERNMQ 368
           KLLKK SA Q SKTASPVEQFR SL+QG EVSIKELD+LL++L EKKRKLEQEEAERNMQ
Sbjct: 105 KLLKKTSARQISKTASPVEQFRHSLEQGSEVSIKELDALLLMLSEKKRKLEQEEAERNMQ 164

Query: 367 ILLDFLHILRKQKIDELNEIQNDLQYVKEDINAVERYRIDLYRARDR------------- 227
           ILLDFL +LRKQK+DELNE+Q+DLQY+KED+N+VER+RIDLYRARDR             
Sbjct: 165 ILLDFLQMLRKQKVDELNEVQHDLQYIKEDLNSVERHRIDLYRARDRYSMKLRMLADDPI 224

Query: 226 ----------RTSSGLACSSRSVHGGLAAGNFQYKKGDSKPQFGSLGPQKKNASLSALNS 77
                     R   GL  +S++  GGL  GN  +KK DSK Q  S GPQ+K+ S+S LNS
Sbjct: 225 GKKPWSSSTDRNFGGLFSTSQNAPGGLPTGNLTFKKVDSKAQISSPGPQRKDTSISELNS 284

Query: 76  QHMSQSGLAVVRKKRVHAQFNDLQE 2
           QHMSQSGLAVVRKKRV+AQFNDLQE
Sbjct: 285 QHMSQSGLAVVRKKRVNAQFNDLQE 309


>gb|AAG31173.1| COP1 [Ipomoea nil]
          Length = 677

 Score =  365 bits (938), Expect = 7e-99
 Identities = 190/270 (70%), Positives = 213/270 (78%), Gaps = 28/270 (10%)
 Frame = -3

Query: 727 LDKDLLCPICMQIIKDAFLTSCGHSFCYMCIVTHLQNKSDCPCCSHYLTPSQLYPNFLLD 548
           LD++LLCPICMQIIKDAFLTSCGHSFCYMCIVTHL NKSDCPCCSHYLT +QLYPNFLLD
Sbjct: 47  LDRELLCPICMQIIKDAFLTSCGHSFCYMCIVTHLHNKSDCPCCSHYLTTAQLYPNFLLD 106

Query: 547 KLLKKRSAVQNSKTASPVEQFRQSLQQGCEVSIKELDSLLMLLGEKKRKLEQEEAERNMQ 368
           KLLKK SA Q SKTASPVEQFR S++QG EVSIKELD LL +L EKKRKLEQEEAERNMQ
Sbjct: 107 KLLKKTSAHQISKTASPVEQFRHSIEQGREVSIKELDVLLTILAEKKRKLEQEEAERNMQ 166

Query: 367 ILLDFLHILRKQKIDELNEIQNDLQYVKEDINAVERYRIDLYRARDR------------- 227
           ILL+FLH+L+K+K+DELNE+QNDLQY+KEDINAVER+RIDLYRARDR             
Sbjct: 167 ILLEFLHMLKKKKVDELNEVQNDLQYIKEDINAVERHRIDLYRARDRYSMKLRMLADDPL 226

Query: 226 ----------RTSSGLACSSRSVHGGLAAGNFQYKKGDSKPQFGSLGPQKKNASLSAL-- 83
                     R + GL  SSRS HGGLA+GN  YKK D        G Q+K+ S++ L  
Sbjct: 227 GSKSRSSSVDRNTIGLFPSSRSAHGGLASGNLMYKKNDG-------GSQRKDVSVTELSL 279

Query: 82  ---NSQHMSQSGLAVVRKKRVHAQFNDLQE 2
              +SQHM+QSGLAV+RKKRVHAQFNDLQE
Sbjct: 280 NGSDSQHMNQSGLAVMRKKRVHAQFNDLQE 309


>ref|XP_006447656.1| hypothetical protein CICLE_v10014491mg [Citrus clementina]
           gi|568830650|ref|XP_006469604.1| PREDICTED: E3
           ubiquitin-protein ligase COP1-like [Citrus sinensis]
           gi|557550267|gb|ESR60896.1| hypothetical protein
           CICLE_v10014491mg [Citrus clementina]
          Length = 680

 Score =  359 bits (922), Expect = 5e-97
 Identities = 183/265 (69%), Positives = 210/265 (79%), Gaps = 23/265 (8%)
 Frame = -3

Query: 727 LDKDLLCPICMQIIKDAFLTSCGHSFCYMCIVTHLQNKSDCPCCSHYLTPSQLYPNFLLD 548
           LDKD+LCPICMQIIK+AFLT+CGHSFCYMCI+THL+NKSDCPCC HYLT +QLYPNFLLD
Sbjct: 49  LDKDMLCPICMQIIKEAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNNQLYPNFLLD 108

Query: 547 KLLKKRSAVQNSKTASPVEQFRQSLQQGCEVSIKELDSLLMLLGEKKRKLEQEEAERNMQ 368
           KLLKK SA Q SKTASP+E FRQ+LQQGC VS+KE+DSL+ LL EKKRK+EQEEAERNMQ
Sbjct: 109 KLLKKTSARQISKTASPLENFRQALQQGCGVSVKEIDSLMSLLSEKKRKMEQEEAERNMQ 168

Query: 367 ILLDFLHILRKQKIDELNEIQNDLQYVKEDINAVERYRIDLYRARDR------------- 227
           ILLDFLH LRKQK+DEL EIQ DL Y+KEDINAVER+RIDLYRARDR             
Sbjct: 169 ILLDFLHCLRKQKVDELKEIQTDLHYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDSN 228

Query: 226 ----------RTSSGLACSSRSVHGGLAAGNFQYKKGDSKPQFGSLGPQKKNASLSALNS 77
                     + SSG+  SS +  GG +AG+ Q KKGD K Q  S G Q+K+ SL+  +S
Sbjct: 229 TRKSWVSSIDKNSSGIITSSLNARGGSSAGSLQNKKGDGKAQANSHGHQRKD-SLTGSDS 287

Query: 76  QHMSQSGLAVVRKKRVHAQFNDLQE 2
           Q ++QSGL+VVRKKRVHAQFNDLQE
Sbjct: 288 QCLNQSGLSVVRKKRVHAQFNDLQE 312


>gb|AAN86553.1| COP1 [Brassica rapa subsp. pekinensis]
          Length = 254

 Score =  357 bits (917), Expect = 2e-96
 Identities = 185/258 (71%), Positives = 205/258 (79%), Gaps = 23/258 (8%)
 Frame = -3

Query: 706 PICMQIIKDAFLTSCGHSFCYMCIVTHLQNKSDCPCCSHYLTPSQLYPNFLLDKLLKKRS 527
           PICMQIIKDAFLTSCGHSFCYMCIVTHL NKSDCPCCSHYLT +QLYPNFLLDKLLKK S
Sbjct: 2   PICMQIIKDAFLTSCGHSFCYMCIVTHLHNKSDCPCCSHYLTTAQLYPNFLLDKLLKKTS 61

Query: 526 AVQNSKTASPVEQFRQSLQQGCEVSIKELDSLLMLLGEKKRKLEQEEAERNMQILLDFLH 347
           A Q SKTASPVEQFR S++QG EVSIKELD L  +L EKKRKLEQEEAERNMQILL+FLH
Sbjct: 62  AHQISKTASPVEQFRHSIEQGREVSIKELDVLSTILAEKKRKLEQEEAERNMQILLEFLH 121

Query: 346 ILRKQKIDELNEIQNDLQYVKEDINAVERYRIDLYRARDR-------------------- 227
           +L+K+K+DELNEIQNDLQY+KED+NAVER+RI+LYRARDR                    
Sbjct: 122 MLKKKKVDELNEIQNDLQYIKEDVNAVERHRIELYRARDRYSMKLRMLADDPLGSKSRSS 181

Query: 226 ---RTSSGLACSSRSVHGGLAAGNFQYKKGDSKPQFGSLGPQKKNASLSALNSQHMSQSG 56
              R + GL  SSRS HGGLA+GN  YKK D        G Q+K+ S++ LNSQHMSQSG
Sbjct: 182 SVDRNTIGLFPSSRSAHGGLASGNLMYKKMD--------GSQRKDVSVTELNSQHMSQSG 233

Query: 55  LAVVRKKRVHAQFNDLQE 2
           LAV+RKKRVHAQFNDLQE
Sbjct: 234 LAVMRKKRVHAQFNDLQE 251


>gb|EOX93348.1| Transducin/WD40 repeat-like superfamily protein isoform 5
           [Theobroma cacao]
          Length = 643

 Score =  355 bits (912), Expect = 8e-96
 Identities = 182/265 (68%), Positives = 211/265 (79%), Gaps = 23/265 (8%)
 Frame = -3

Query: 727 LDKDLLCPICMQIIKDAFLTSCGHSFCYMCIVTHLQNKSDCPCCSHYLTPSQLYPNFLLD 548
           +DKDLLCPICMQIIKDAFLTSCGHSFCYMCI+THL+NKSDCPCCS +LT +QL+PNFLLD
Sbjct: 48  VDKDLLCPICMQIIKDAFLTSCGHSFCYMCIITHLRNKSDCPCCSQFLTNNQLFPNFLLD 107

Query: 547 KLLKKRSAVQNSKTASPVEQFRQSLQQGCEVSIKELDSLLMLLGEKKRKLEQEEAERNMQ 368
           KLLKK S+ Q SKTASPVEQFRQ+LQQG EVSIKELD+LL LL EKKRK+EQEEAERNMQ
Sbjct: 108 KLLKKTSSRQISKTASPVEQFRQALQQGYEVSIKELDNLLSLLAEKKRKMEQEEAERNMQ 167

Query: 367 ILLDFLHILRKQKIDELNEIQNDLQYVKEDINAVERYRIDLYRARDR------------- 227
           ILLDFL+ LRKQK+DELNE+Q+DLQ++KEDIN+VER+RIDLYRARDR             
Sbjct: 168 ILLDFLNCLRKQKVDELNEVQSDLQFIKEDINSVERHRIDLYRARDRYSVKLRMLGDDSG 227

Query: 226 ----------RTSSGLACSSRSVHGGLAAGNFQYKKGDSKPQFGSLGPQKKNASLSALNS 77
                     + SSG+  SS +V GG++AG  Q KK D K Q    GPQ+K+A LS  +S
Sbjct: 228 TGKPWPSSIDKNSSGIVSSSLNVRGGMSAGYLQNKKIDGKAQVSGHGPQRKDA-LSGADS 286

Query: 76  QHMSQSGLAVVRKKRVHAQFNDLQE 2
           Q  +QSGL++ RKKRVH QFNDLQE
Sbjct: 287 QGFNQSGLSIARKKRVHVQFNDLQE 311


>gb|EOX93347.1| Transducin/WD40 repeat-like superfamily protein isoform 4
           [Theobroma cacao]
          Length = 635

 Score =  355 bits (912), Expect = 8e-96
 Identities = 182/265 (68%), Positives = 211/265 (79%), Gaps = 23/265 (8%)
 Frame = -3

Query: 727 LDKDLLCPICMQIIKDAFLTSCGHSFCYMCIVTHLQNKSDCPCCSHYLTPSQLYPNFLLD 548
           +DKDLLCPICMQIIKDAFLTSCGHSFCYMCI+THL+NKSDCPCCS +LT +QL+PNFLLD
Sbjct: 48  VDKDLLCPICMQIIKDAFLTSCGHSFCYMCIITHLRNKSDCPCCSQFLTNNQLFPNFLLD 107

Query: 547 KLLKKRSAVQNSKTASPVEQFRQSLQQGCEVSIKELDSLLMLLGEKKRKLEQEEAERNMQ 368
           KLLKK S+ Q SKTASPVEQFRQ+LQQG EVSIKELD+LL LL EKKRK+EQEEAERNMQ
Sbjct: 108 KLLKKTSSRQISKTASPVEQFRQALQQGYEVSIKELDNLLSLLAEKKRKMEQEEAERNMQ 167

Query: 367 ILLDFLHILRKQKIDELNEIQNDLQYVKEDINAVERYRIDLYRARDR------------- 227
           ILLDFL+ LRKQK+DELNE+Q+DLQ++KEDIN+VER+RIDLYRARDR             
Sbjct: 168 ILLDFLNCLRKQKVDELNEVQSDLQFIKEDINSVERHRIDLYRARDRYSVKLRMLGDDSG 227

Query: 226 ----------RTSSGLACSSRSVHGGLAAGNFQYKKGDSKPQFGSLGPQKKNASLSALNS 77
                     + SSG+  SS +V GG++AG  Q KK D K Q    GPQ+K+A LS  +S
Sbjct: 228 TGKPWPSSIDKNSSGIVSSSLNVRGGMSAGYLQNKKIDGKAQVSGHGPQRKDA-LSGADS 286

Query: 76  QHMSQSGLAVVRKKRVHAQFNDLQE 2
           Q  +QSGL++ RKKRVH QFNDLQE
Sbjct: 287 QGFNQSGLSIARKKRVHVQFNDLQE 311


>gb|EOX93345.1| Transducin/WD40 repeat-like superfamily protein isoform 2
           [Theobroma cacao]
          Length = 694

 Score =  355 bits (912), Expect = 8e-96
 Identities = 182/265 (68%), Positives = 211/265 (79%), Gaps = 23/265 (8%)
 Frame = -3

Query: 727 LDKDLLCPICMQIIKDAFLTSCGHSFCYMCIVTHLQNKSDCPCCSHYLTPSQLYPNFLLD 548
           +DKDLLCPICMQIIKDAFLTSCGHSFCYMCI+THL+NKSDCPCCS +LT +QL+PNFLLD
Sbjct: 48  VDKDLLCPICMQIIKDAFLTSCGHSFCYMCIITHLRNKSDCPCCSQFLTNNQLFPNFLLD 107

Query: 547 KLLKKRSAVQNSKTASPVEQFRQSLQQGCEVSIKELDSLLMLLGEKKRKLEQEEAERNMQ 368
           KLLKK S+ Q SKTASPVEQFRQ+LQQG EVSIKELD+LL LL EKKRK+EQEEAERNMQ
Sbjct: 108 KLLKKTSSRQISKTASPVEQFRQALQQGYEVSIKELDNLLSLLAEKKRKMEQEEAERNMQ 167

Query: 367 ILLDFLHILRKQKIDELNEIQNDLQYVKEDINAVERYRIDLYRARDR------------- 227
           ILLDFL+ LRKQK+DELNE+Q+DLQ++KEDIN+VER+RIDLYRARDR             
Sbjct: 168 ILLDFLNCLRKQKVDELNEVQSDLQFIKEDINSVERHRIDLYRARDRYSVKLRMLGDDSG 227

Query: 226 ----------RTSSGLACSSRSVHGGLAAGNFQYKKGDSKPQFGSLGPQKKNASLSALNS 77
                     + SSG+  SS +V GG++AG  Q KK D K Q    GPQ+K+A LS  +S
Sbjct: 228 TGKPWPSSIDKNSSGIVSSSLNVRGGMSAGYLQNKKIDGKAQVSGHGPQRKDA-LSGADS 286

Query: 76  QHMSQSGLAVVRKKRVHAQFNDLQE 2
           Q  +QSGL++ RKKRVH QFNDLQE
Sbjct: 287 QGFNQSGLSIARKKRVHVQFNDLQE 311


>gb|EOX93344.1| Transducin/WD40 repeat-like superfamily protein isoform 1
           [Theobroma cacao]
          Length = 679

 Score =  355 bits (912), Expect = 8e-96
 Identities = 182/265 (68%), Positives = 211/265 (79%), Gaps = 23/265 (8%)
 Frame = -3

Query: 727 LDKDLLCPICMQIIKDAFLTSCGHSFCYMCIVTHLQNKSDCPCCSHYLTPSQLYPNFLLD 548
           +DKDLLCPICMQIIKDAFLTSCGHSFCYMCI+THL+NKSDCPCCS +LT +QL+PNFLLD
Sbjct: 48  VDKDLLCPICMQIIKDAFLTSCGHSFCYMCIITHLRNKSDCPCCSQFLTNNQLFPNFLLD 107

Query: 547 KLLKKRSAVQNSKTASPVEQFRQSLQQGCEVSIKELDSLLMLLGEKKRKLEQEEAERNMQ 368
           KLLKK S+ Q SKTASPVEQFRQ+LQQG EVSIKELD+LL LL EKKRK+EQEEAERNMQ
Sbjct: 108 KLLKKTSSRQISKTASPVEQFRQALQQGYEVSIKELDNLLSLLAEKKRKMEQEEAERNMQ 167

Query: 367 ILLDFLHILRKQKIDELNEIQNDLQYVKEDINAVERYRIDLYRARDR------------- 227
           ILLDFL+ LRKQK+DELNE+Q+DLQ++KEDIN+VER+RIDLYRARDR             
Sbjct: 168 ILLDFLNCLRKQKVDELNEVQSDLQFIKEDINSVERHRIDLYRARDRYSVKLRMLGDDSG 227

Query: 226 ----------RTSSGLACSSRSVHGGLAAGNFQYKKGDSKPQFGSLGPQKKNASLSALNS 77
                     + SSG+  SS +V GG++AG  Q KK D K Q    GPQ+K+A LS  +S
Sbjct: 228 TGKPWPSSIDKNSSGIVSSSLNVRGGMSAGYLQNKKIDGKAQVSGHGPQRKDA-LSGADS 286

Query: 76  QHMSQSGLAVVRKKRVHAQFNDLQE 2
           Q  +QSGL++ RKKRVH QFNDLQE
Sbjct: 287 QGFNQSGLSIARKKRVHVQFNDLQE 311


>gb|EXB72970.1| E3 ubiquitin-protein ligase COP1 [Morus notabilis]
          Length = 682

 Score =  349 bits (896), Expect = 5e-94
 Identities = 176/265 (66%), Positives = 210/265 (79%), Gaps = 23/265 (8%)
 Frame = -3

Query: 727 LDKDLLCPICMQIIKDAFLTSCGHSFCYMCIVTHLQNKSDCPCCSHYLTPSQLYPNFLLD 548
           +DKD LCPICMQ IKDAFLT+CGHSFCYMCI+THL+NKSDCPCCSH+LT  QL+PNFLLD
Sbjct: 51  VDKDFLCPICMQTIKDAFLTACGHSFCYMCIITHLRNKSDCPCCSHFLTTKQLFPNFLLD 110

Query: 547 KLLKKRSAVQNSKTASPVEQFRQSLQQGCEVSIKELDSLLMLLGEKKRKLEQEEAERNMQ 368
           KLLKK  A Q SKTASPVE FRQ+LQQGCEVSIKE+D+LL LL +KKRK+EQEEAERNMQ
Sbjct: 111 KLLKKTCARQISKTASPVEHFRQALQQGCEVSIKEVDTLLALLADKKRKMEQEEAERNMQ 170

Query: 367 ILLDFLHILRKQKIDELNEIQNDLQYVKEDINAVERYRIDLYRARDR------------- 227
           ILLDFLH LRKQK++ELNE+Q DLQ+VKEDIN+VER+R+DLYRA++R             
Sbjct: 171 ILLDFLHCLRKQKVEELNEVQTDLQFVKEDINSVERHRMDLYRAKERYSLKLRTVGEDSS 230

Query: 226 ----------RTSSGLACSSRSVHGGLAAGNFQYKKGDSKPQFGSLGPQKKNASLSALNS 77
                     + SSG   S  ++ GG+++GN Q KK D + Q  S G Q+K+ S+S  +S
Sbjct: 231 ARKPWHSLIDKNSSGPISSPLNLRGGMSSGNLQIKKLDGRGQVNSSGLQRKD-SMSGSDS 289

Query: 76  QHMSQSGLAVVRKKRVHAQFNDLQE 2
           Q+++QSGLAVVRKKRVHAQFNDLQE
Sbjct: 290 QYINQSGLAVVRKKRVHAQFNDLQE 314


>ref|XP_006293448.1| hypothetical protein CARUB_v10022726mg [Capsella rubella]
           gi|482562156|gb|EOA26346.1| hypothetical protein
           CARUB_v10022726mg [Capsella rubella]
          Length = 723

 Score =  348 bits (892), Expect = 2e-93
 Identities = 176/263 (66%), Positives = 208/263 (79%), Gaps = 21/263 (7%)
 Frame = -3

Query: 727 LDKDLLCPICMQIIKDAFLTSCGHSFCYMCIVTHLQNKSDCPCCSHYLTPSQLYPNFLLD 548
           LDKDLLCPICMQIIKDAFLT+CGHSFCYMCI+THL+NKSDCPCCS +LT +QLYPNFLLD
Sbjct: 94  LDKDLLCPICMQIIKDAFLTACGHSFCYMCIITHLRNKSDCPCCSQHLTNNQLYPNFLLD 153

Query: 547 KLLKKRSAVQNSKTASPVEQFRQSLQQGCEVSIKELDSLLMLLGEKKRKLEQEEAERNMQ 368
           KLLKK SA   SKTASP++QFR++LQ+GC+VSIKE+D+LL LL E+KRK+EQEEAERNMQ
Sbjct: 154 KLLKKTSARHVSKTASPLDQFREALQRGCDVSIKEVDNLLSLLAERKRKIEQEEAERNMQ 213

Query: 367 ILLDFLHILRKQKIDELNEIQNDLQYVKEDINAVERYRIDLYRARDR------------- 227
           ILLDFLH LRKQK+DELNE+Q DLQY+KEDINAVER+RIDLYRARDR             
Sbjct: 214 ILLDFLHCLRKQKVDELNEVQTDLQYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDPS 273

Query: 226 --------RTSSGLACSSRSVHGGLAAGNFQYKKGDSKPQFGSLGPQKKNASLSALNSQH 71
                   +  SGL  +S S+ GG   GN+Q KK + K Q  S G  KK+A LS  +SQ 
Sbjct: 274 TRNAWPHEKNHSGLNSNSLSIRGGNLVGNYQNKKAEGKAQGSSHGLPKKDA-LSGSDSQS 332

Query: 70  MSQSGLAVVRKKRVHAQFNDLQE 2
           ++QS +++ RKKR+HAQFNDLQE
Sbjct: 333 LNQSTVSMARKKRIHAQFNDLQE 355


>ref|XP_002879425.1| hypothetical protein ARALYDRAFT_902362 [Arabidopsis lyrata subsp.
           lyrata] gi|297325264|gb|EFH55684.1| hypothetical protein
           ARALYDRAFT_902362 [Arabidopsis lyrata subsp. lyrata]
          Length = 675

 Score =  347 bits (890), Expect = 3e-93
 Identities = 177/263 (67%), Positives = 208/263 (79%), Gaps = 21/263 (7%)
 Frame = -3

Query: 727 LDKDLLCPICMQIIKDAFLTSCGHSFCYMCIVTHLQNKSDCPCCSHYLTPSQLYPNFLLD 548
           LDKDLLCPICMQIIKDAFLT+CGHSFCYMCI+THL+NKSDCPCCS +LT +QLYPNFLLD
Sbjct: 46  LDKDLLCPICMQIIKDAFLTACGHSFCYMCIITHLRNKSDCPCCSQHLTNNQLYPNFLLD 105

Query: 547 KLLKKRSAVQNSKTASPVEQFRQSLQQGCEVSIKELDSLLMLLGEKKRKLEQEEAERNMQ 368
           KLLKK SA Q SKTASP++QFR++LQ+GC+VSIKE+D+LL LL E+KRK+EQEEAERNMQ
Sbjct: 106 KLLKKTSARQVSKTASPLDQFREALQRGCDVSIKEVDNLLSLLAERKRKMEQEEAERNMQ 165

Query: 367 ILLDFLHILRKQKIDELNEIQNDLQYVKEDINAVERYRIDLYRARDR------------- 227
           ILLDFLH LRKQK+DELNE+Q DLQY+KEDINAVER+RIDLYRARDR             
Sbjct: 166 ILLDFLHCLRKQKVDELNEVQTDLQYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDPS 225

Query: 226 --------RTSSGLACSSRSVHGGLAAGNFQYKKGDSKPQFGSLGPQKKNASLSALNSQH 71
                   +  SG   +S SV GG   GN+Q KK + K Q  S G  KK+A LS  +SQ 
Sbjct: 226 TRNAWPHEKNQSGFNSNSLSVRGGNFLGNYQNKKVEGKAQGSSHGLPKKDA-LSGSDSQS 284

Query: 70  MSQSGLAVVRKKRVHAQFNDLQE 2
           ++QS +++ RKKR+HAQFNDLQE
Sbjct: 285 LNQSTVSMARKKRIHAQFNDLQE 307


>ref|XP_006410433.1| hypothetical protein EUTSA_v10016348mg [Eutrema salsugineum]
           gi|557111602|gb|ESQ51886.1| hypothetical protein
           EUTSA_v10016348mg [Eutrema salsugineum]
          Length = 678

 Score =  345 bits (886), Expect = 8e-93
 Identities = 176/263 (66%), Positives = 209/263 (79%), Gaps = 21/263 (7%)
 Frame = -3

Query: 727 LDKDLLCPICMQIIKDAFLTSCGHSFCYMCIVTHLQNKSDCPCCSHYLTPSQLYPNFLLD 548
           LDKDLLCPICMQIIKDAFLT+CGHSFCYMCI+THL++KSDCPCCS +LT +QLYPNFLLD
Sbjct: 49  LDKDLLCPICMQIIKDAFLTACGHSFCYMCIITHLRHKSDCPCCSQHLTNNQLYPNFLLD 108

Query: 547 KLLKKRSAVQNSKTASPVEQFRQSLQQGCEVSIKELDSLLMLLGEKKRKLEQEEAERNMQ 368
           KLLKK SA Q SKTASP++QFR++LQ+GC+VSIKE+D+LL LL E+KRK+EQEEAERNMQ
Sbjct: 109 KLLKKTSARQVSKTASPLDQFREALQRGCDVSIKEVDNLLSLLAERKRKMEQEEAERNMQ 168

Query: 367 ILLDFLHILRKQKIDELNEIQNDLQYVKEDINAVERYRIDLYRARDR------------- 227
           ILLDFLH LRKQK+DELNE+Q DLQY+KEDINAVER+RIDLYRARDR             
Sbjct: 169 ILLDFLHCLRKQKVDELNEVQTDLQYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDPS 228

Query: 226 --------RTSSGLACSSRSVHGGLAAGNFQYKKGDSKPQFGSLGPQKKNASLSALNSQH 71
                   +  SG   +S S+ GG + GNFQ KK + K Q  S G  KK+A LS  +SQ 
Sbjct: 229 TRNAWPLEKNHSGFNSNSLSMRGGNSLGNFQNKKIEGKAQGSSHGLPKKDA-LSGSDSQS 287

Query: 70  MSQSGLAVVRKKRVHAQFNDLQE 2
           ++QS +++ RKKR+HAQFNDLQE
Sbjct: 288 LNQSTVSMARKKRIHAQFNDLQE 310


>gb|AFH57127.1| COP1 protein, partial [Beta vulgaris subsp. vulgaris]
          Length = 474

 Score =  345 bits (886), Expect = 8e-93
 Identities = 176/263 (66%), Positives = 207/263 (78%), Gaps = 22/263 (8%)
 Frame = -3

Query: 724 DKDLLCPICMQIIKDAFLTSCGHSFCYMCIVTHLQNKSDCPCCSHYLTPSQLYPNFLLDK 545
           DKDL+CPICMQ+IKDAFLT+CGHSFCYMCI+THL+NKSDCPCC  +LT +QLYPNFLLDK
Sbjct: 8   DKDLMCPICMQMIKDAFLTACGHSFCYMCIITHLRNKSDCPCCGRHLTNNQLYPNFLLDK 67

Query: 544 LLKKRSAVQNSKTASPVEQFRQSLQQGCEVSIKELDSLLMLLGEKKRKLEQEEAERNMQI 365
           LLKK S  Q S+ ASPVEQFR++L QGCEVS+KE+D+L+ LL EKKRK+EQEEAERNMQI
Sbjct: 68  LLKKASVRQVSRNASPVEQFRRALLQGCEVSVKEVDTLMSLLAEKKRKMEQEEAERNMQI 127

Query: 364 LLDFLHILRKQKIDELNEIQNDLQYVKEDINAVERYRIDLYRARDR-------------- 227
           LLDFLH LRKQK+DEL+EIQ DLQY+KEDI AVER+R++LYRARDR              
Sbjct: 128 LLDFLHCLRKQKVDELSEIQGDLQYIKEDITAVERHRMELYRARDRYSVKLRMLSDDPSP 187

Query: 226 --------RTSSGLACSSRSVHGGLAAGNFQYKKGDSKPQFGSLGPQKKNASLSALNSQH 71
                   R+  G++  SRS  GGLAAG FQ KK D K Q GS GP +K+A L  L+SQ+
Sbjct: 188 KLWPSTADRSGGGVSSGSRSSLGGLAAGTFQNKKMDGKAQ-GSQGPLRKDA-LGGLDSQY 245

Query: 70  MSQSGLAVVRKKRVHAQFNDLQE 2
           + QSGLAV+RKK +H QFNDLQE
Sbjct: 246 IXQSGLAVMRKKXIHVQFNDLQE 268


>gb|AAA32772.1| regulatory protein [Arabidopsis thaliana]
          Length = 675

 Score =  343 bits (881), Expect = 3e-92
 Identities = 174/263 (66%), Positives = 206/263 (78%), Gaps = 21/263 (7%)
 Frame = -3

Query: 727 LDKDLLCPICMQIIKDAFLTSCGHSFCYMCIVTHLQNKSDCPCCSHYLTPSQLYPNFLLD 548
           LDKDLLCPICMQIIKDAFLT+CGHSFCYMCI+THL+NKSDCPCCS +LT +QLYPNFLLD
Sbjct: 46  LDKDLLCPICMQIIKDAFLTACGHSFCYMCIITHLRNKSDCPCCSQHLTNNQLYPNFLLD 105

Query: 547 KLLKKRSAVQNSKTASPVEQFRQSLQQGCEVSIKELDSLLMLLGEKKRKLEQEEAERNMQ 368
           KLLKK SA   SKTASP++QFR++LQ+GC+VSIKE+D+LL LL E+KRK+EQEEAERNMQ
Sbjct: 106 KLLKKTSARHVSKTASPLDQFREALQRGCDVSIKEVDNLLTLLAERKRKMEQEEAERNMQ 165

Query: 367 ILLDFLHILRKQKIDELNEIQNDLQYVKEDINAVERYRIDLYRARDR------------- 227
           ILLDFLH LRKQK+DELNE+Q DLQY+KEDINAVER+RIDLYRARDR             
Sbjct: 166 ILLDFLHCLRKQKVDELNEVQTDLQYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDPS 225

Query: 226 --------RTSSGLACSSRSVHGGLAAGNFQYKKGDSKPQFGSLGPQKKNASLSALNSQH 71
                   +   G   +S S+ GG   GN+Q KK + K Q  S G  KK+A LS  +SQ 
Sbjct: 226 TRNAWPHEKNQIGFNSNSLSIRGGNFVGNYQNKKVEGKAQGSSHGLPKKDA-LSGSDSQS 284

Query: 70  MSQSGLAVVRKKRVHAQFNDLQE 2
           ++QS +++ RKKR+HAQFNDLQE
Sbjct: 285 LNQSTVSIARKKRIHAQFNDLQE 307


>ref|NP_180854.1| E3 ubiquitin-protein ligase COP1 [Arabidopsis thaliana]
           gi|20141387|sp|P43254.2|COP1_ARATH RecName: Full=E3
           ubiquitin-protein ligase COP1; AltName:
           Full=Constitutive photomorphogenesis protein 1
           gi|2702280|gb|AAB91983.1| COP1 regulatory protein
           [Arabidopsis thaliana] gi|95147316|gb|ABF57293.1|
           At2g32950 [Arabidopsis thaliana]
           gi|330253672|gb|AEC08766.1| E3 ubiquitin-protein ligase
           COP1 [Arabidopsis thaliana]
          Length = 675

 Score =  343 bits (879), Expect = 5e-92
 Identities = 174/263 (66%), Positives = 206/263 (78%), Gaps = 21/263 (7%)
 Frame = -3

Query: 727 LDKDLLCPICMQIIKDAFLTSCGHSFCYMCIVTHLQNKSDCPCCSHYLTPSQLYPNFLLD 548
           LDKDLLCPICMQIIKDAFLT+CGHSFCYMCI+THL+NKSDCPCCS +LT +QLYPNFLLD
Sbjct: 46  LDKDLLCPICMQIIKDAFLTACGHSFCYMCIITHLRNKSDCPCCSQHLTNNQLYPNFLLD 105

Query: 547 KLLKKRSAVQNSKTASPVEQFRQSLQQGCEVSIKELDSLLMLLGEKKRKLEQEEAERNMQ 368
           KLLKK SA   SKTASP++QFR++LQ+GC+VSIKE+D+LL LL E+KRK+EQEEAERNMQ
Sbjct: 106 KLLKKTSARHVSKTASPLDQFREALQRGCDVSIKEVDNLLTLLAERKRKMEQEEAERNMQ 165

Query: 367 ILLDFLHILRKQKIDELNEIQNDLQYVKEDINAVERYRIDLYRARDR------------- 227
           ILLDFLH LRKQK+DELNE+Q DLQY+KEDINAVER+RIDLYRARDR             
Sbjct: 166 ILLDFLHCLRKQKVDELNEVQTDLQYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDPS 225

Query: 226 --------RTSSGLACSSRSVHGGLAAGNFQYKKGDSKPQFGSLGPQKKNASLSALNSQH 71
                   +   G   +S S+ GG   GN+Q KK + K Q  S G  KK+A LS  +SQ 
Sbjct: 226 TRNAWPHEKNQIGFNSNSLSIRGGNFVGNYQNKKVEGKAQGSSHGLPKKDA-LSGSDSQS 284

Query: 70  MSQSGLAVVRKKRVHAQFNDLQE 2
           ++QS +++ RKKR+HAQFNDLQE
Sbjct: 285 LNQSTVSMARKKRIHAQFNDLQE 307


>dbj|BAE98955.1| photomorphogenesis repressor [Arabidopsis thaliana]
          Length = 391

 Score =  343 bits (879), Expect = 5e-92
 Identities = 174/263 (66%), Positives = 206/263 (78%), Gaps = 21/263 (7%)
 Frame = -3

Query: 727 LDKDLLCPICMQIIKDAFLTSCGHSFCYMCIVTHLQNKSDCPCCSHYLTPSQLYPNFLLD 548
           LDKDLLCPICMQIIKDAFLT+CGHSFCYMCI+THL+NKSDCPCCS +LT +QLYPNFLLD
Sbjct: 46  LDKDLLCPICMQIIKDAFLTACGHSFCYMCIITHLRNKSDCPCCSQHLTNNQLYPNFLLD 105

Query: 547 KLLKKRSAVQNSKTASPVEQFRQSLQQGCEVSIKELDSLLMLLGEKKRKLEQEEAERNMQ 368
           KLLKK SA   SKTASP++QFR++LQ+GC+VSIKE+D+LL LL E+KRK+EQEEAERNMQ
Sbjct: 106 KLLKKTSARHVSKTASPLDQFREALQRGCDVSIKEVDNLLTLLAERKRKMEQEEAERNMQ 165

Query: 367 ILLDFLHILRKQKIDELNEIQNDLQYVKEDINAVERYRIDLYRARDR------------- 227
           ILLDFLH LRKQK+DELNE+Q DLQY+KEDINAVER+RIDLYRARDR             
Sbjct: 166 ILLDFLHCLRKQKVDELNEVQTDLQYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDPS 225

Query: 226 --------RTSSGLACSSRSVHGGLAAGNFQYKKGDSKPQFGSLGPQKKNASLSALNSQH 71
                   +   G   +S S+ GG   GN+Q KK + K Q  S G  KK+A LS  +SQ 
Sbjct: 226 TRNAWPHEKNQIGFNSNSLSIRGGNFVGNYQNKKVEGKAQGSSHGLPKKDA-LSGSDSQS 284

Query: 70  MSQSGLAVVRKKRVHAQFNDLQE 2
           ++QS +++ RKKR+HAQFNDLQE
Sbjct: 285 LNQSTVSMARKKRIHAQFNDLQE 307


>gb|ADL59932.1| constitutively photomorphogenic 1 [Brassica napus]
          Length = 677

 Score =  341 bits (874), Expect = 2e-91
 Identities = 174/264 (65%), Positives = 207/264 (78%), Gaps = 22/264 (8%)
 Frame = -3

Query: 727 LDKDLLCPICMQIIKDAFLTSCGHSFCYMCIVTHLQNKSDCPCCSHYLTPSQLYPNFLLD 548
           LDKDLLCPICMQ+IKDAFLT+CGHSFCYMCI+THL+NKSDCPCCS +LT +QLYPNFLLD
Sbjct: 47  LDKDLLCPICMQVIKDAFLTACGHSFCYMCIITHLRNKSDCPCCSQHLTNNQLYPNFLLD 106

Query: 547 KLLKKRSAVQNSKTASPVEQFRQSLQQGCEVSIKELDSLLMLLGEKKRKLEQEEAERNMQ 368
           KLLKK SA   SKTASP++QFR +LQ+GC+VSIKE+D+LL LL EKKRK+EQEEAERNMQ
Sbjct: 107 KLLKKTSARHVSKTASPLDQFRDALQRGCDVSIKEVDNLLTLLAEKKRKMEQEEAERNMQ 166

Query: 367 ILLDFLHILRKQKIDELNEIQNDLQYVKEDINAVERYRIDLYRARDR------------- 227
           ILLDFLH LRKQK+DELNE+Q DLQY+KEDINAVER+RIDLYRARDR             
Sbjct: 167 ILLDFLHCLRKQKVDELNEVQTDLQYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDPS 226

Query: 226 --------RTSSGLACSSRSVHGGLAAGNFQYKK-GDSKPQFGSLGPQKKNASLSALNSQ 74
                   ++ +G   +S S+ GG  +GNFQ KK  + K Q  S G  KK+A  S  +SQ
Sbjct: 227 TRNAWPPEKSHTGFNSNSLSIRGGNPSGNFQNKKVVEGKAQGSSHGISKKDAQ-SGSDSQ 285

Query: 73  HMSQSGLAVVRKKRVHAQFNDLQE 2
            ++QS +++ RKKR+HAQFNDLQE
Sbjct: 286 SLNQSSVSMARKKRIHAQFNDLQE 309


>gb|ADR72985.1| COP1 protein [Brassica rapa var. purpuraria]
           gi|338224822|gb|AEI89703.1| COP1 protein [Brassica rapa
           subsp. chinensis]
          Length = 676

 Score =  340 bits (872), Expect = 3e-91
 Identities = 172/263 (65%), Positives = 204/263 (77%), Gaps = 21/263 (7%)
 Frame = -3

Query: 727 LDKDLLCPICMQIIKDAFLTSCGHSFCYMCIVTHLQNKSDCPCCSHYLTPSQLYPNFLLD 548
           LDKDLLCPICMQ+IKDAFLT+CGHSFCYMCI+THL+NKSDCPCCS +LT  QLYPNFLLD
Sbjct: 47  LDKDLLCPICMQVIKDAFLTACGHSFCYMCIITHLKNKSDCPCCSQHLTNKQLYPNFLLD 106

Query: 547 KLLKKRSAVQNSKTASPVEQFRQSLQQGCEVSIKELDSLLMLLGEKKRKLEQEEAERNMQ 368
           KLLKK SA   SKTASP++QFR +LQ+GC+VSIKE+D+LL LL EKKRK+EQEEAERNMQ
Sbjct: 107 KLLKKTSARHVSKTASPLDQFRDALQRGCDVSIKEVDNLLTLLAEKKRKMEQEEAERNMQ 166

Query: 367 ILLDFLHILRKQKIDELNEIQNDLQYVKEDINAVERYRIDLYRARDR------------- 227
           ILLDFLH LRKQK+DELNE+Q DLQY+KEDINAVER+RIDLYRARDR             
Sbjct: 167 ILLDFLHCLRKQKVDELNEVQTDLQYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDPS 226

Query: 226 --------RTSSGLACSSRSVHGGLAAGNFQYKKGDSKPQFGSLGPQKKNASLSALNSQH 71
                   ++ +G   +S S+ GG    NFQ KK + K Q  S G  KK+A  S  +SQ 
Sbjct: 227 TRNAWPPEKSHTGFNSNSLSIRGGNPPANFQNKKVEGKAQGSSHGISKKDAQ-SGSDSQS 285

Query: 70  MSQSGLAVVRKKRVHAQFNDLQE 2
           ++QS +++ RKKR+HAQF+DLQE
Sbjct: 286 LNQSSVSMARKKRIHAQFSDLQE 308


>gb|AEE81754.1| constitutively photomorphogenic 1 [Brassica rapa subsp. rapa]
          Length = 677

 Score =  339 bits (870), Expect = 6e-91
 Identities = 174/264 (65%), Positives = 206/264 (78%), Gaps = 22/264 (8%)
 Frame = -3

Query: 727 LDKDLLCPICMQIIKDAFLTSCGHSFCYMCIVTHLQNKSDCPCCSHYLTPSQLYPNFLLD 548
           LDKDLLCPICMQ+IKDAFLT+CGHSFCYMCI+THL+NKSDCPCCS +LT +QLYPNFLLD
Sbjct: 47  LDKDLLCPICMQVIKDAFLTACGHSFCYMCIITHLRNKSDCPCCSQHLTNNQLYPNFLLD 106

Query: 547 KLLKKRSAVQNSKTASPVEQFRQSLQQGCEVSIKELDSLLMLLGEKKRKLEQEEAERNMQ 368
           KLLKK SA   SKTASP++QFR +LQ+GC+VSIKE+D+LL LL EKKRK+EQEEAERNMQ
Sbjct: 107 KLLKKTSARHVSKTASPLDQFRDALQRGCDVSIKEVDNLLTLLAEKKRKMEQEEAERNMQ 166

Query: 367 ILLDFLHILRKQKIDELNEIQNDLQYVKEDINAVERYRIDLYRARDR------------- 227
           ILLDFLH LRKQK DELNE+Q DLQY+KEDINAVER+RIDLYRARDR             
Sbjct: 167 ILLDFLHCLRKQKADELNEVQTDLQYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDPS 226

Query: 226 --------RTSSGLACSSRSVHGGLAAGNFQYKK-GDSKPQFGSLGPQKKNASLSALNSQ 74
                   ++ +G   +S S+ GG  +GNFQ KK  + K Q  S G  KK+A  S  +SQ
Sbjct: 227 TRNAWPLEKSHTGFNSNSLSIRGGNPSGNFQNKKVVEGKAQGSSHGISKKDAQ-SGSDSQ 285

Query: 73  HMSQSGLAVVRKKRVHAQFNDLQE 2
            ++QS +++ RKKR+HAQFNDLQE
Sbjct: 286 SLNQSSVSMARKKRIHAQFNDLQE 309