BLASTX nr result

ID: Catharanthus23_contig00011132 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00011132
         (270 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315361.1| hypothetical protein POPTR_0010s26160g [Popu...   165   7e-39
ref|XP_004236877.1| PREDICTED: transcription elongation factor S...   162   6e-38
ref|XP_002310913.1| hypothetical protein POPTR_0008s00300g [Popu...   162   6e-38
ref|XP_006360853.1| PREDICTED: transcription elongation factor S...   161   7e-38
ref|XP_002270173.1| PREDICTED: transcription elongation factor S...   161   7e-38
ref|XP_006448501.1| hypothetical protein CICLE_v10017231mg [Citr...   160   1e-37
ref|XP_002513156.1| suppressor of ty, putative [Ricinus communis...   160   2e-37
ref|XP_004502081.1| PREDICTED: transcription elongation factor S...   159   4e-37
ref|XP_004156922.1| PREDICTED: uncharacterized LOC101210450 [Cuc...   159   5e-37
ref|XP_004145631.1| PREDICTED: transcription elongation factor S...   159   5e-37
gb|EOX99006.1| Transcription elongation factor SPT4 isoform 3 [T...   157   1e-36
gb|EOX99005.1| Transcription elongation factor SPT4 isoform 2 [T...   157   1e-36
gb|EOX99004.1| Transcription elongation factor SPT4 isoform 1 [T...   157   1e-36
gb|EXB96339.1| hypothetical protein L484_023056 [Morus notabilis]     156   3e-36
ref|NP_001238307.1| uncharacterized protein LOC100306659 [Glycin...   155   5e-36
gb|ESW25065.1| hypothetical protein PHAVU_003G004200g [Phaseolus...   155   7e-36
gb|ESW33428.1| hypothetical protein PHAVU_001G068300g [Phaseolus...   154   2e-35
gb|AFK41664.1| unknown [Lotus japonicus]                              153   2e-35
ref|XP_006288742.1| hypothetical protein CARUB_v10002059mg [Caps...   152   3e-35
ref|XP_003529703.1| PREDICTED: transcription elongation factor S...   152   3e-35

>ref|XP_002315361.1| hypothetical protein POPTR_0010s26160g [Populus trichocarpa]
           gi|118489920|gb|ABK96757.1| unknown [Populus trichocarpa
           x Populus deltoides] gi|222864401|gb|EEF01532.1|
           hypothetical protein POPTR_0010s26160g [Populus
           trichocarpa]
          Length = 116

 Score =  165 bits (417), Expect = 7e-39
 Identities = 78/81 (96%), Positives = 78/81 (96%)
 Frame = -3

Query: 244 MGSNAPAAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPN 65
           MGS   AAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPN
Sbjct: 1   MGS--AAAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPN 58

Query: 64  FTGIISVMDPSRSWAARWLRI 2
           FTGIISVMDPSRSWAARWLRI
Sbjct: 59  FTGIISVMDPSRSWAARWLRI 79


>ref|XP_004236877.1| PREDICTED: transcription elongation factor SPT4 homolog 2-like
           [Solanum lycopersicum]
          Length = 116

 Score =  162 bits (409), Expect = 6e-38
 Identities = 75/81 (92%), Positives = 77/81 (95%)
 Frame = -3

Query: 244 MGSNAPAAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPN 65
           MGS    AQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPN
Sbjct: 1   MGSQP--AQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPN 58

Query: 64  FTGIISVMDPSRSWAARWLRI 2
           FTG+ISVMDP+RSWAARWLRI
Sbjct: 59  FTGVISVMDPTRSWAARWLRI 79


>ref|XP_002310913.1| hypothetical protein POPTR_0008s00300g [Populus trichocarpa]
           gi|222850733|gb|EEE88280.1| hypothetical protein
           POPTR_0008s00300g [Populus trichocarpa]
          Length = 116

 Score =  162 bits (409), Expect = 6e-38
 Identities = 77/81 (95%), Positives = 77/81 (95%)
 Frame = -3

Query: 244 MGSNAPAAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPN 65
           MGS   AAQIPTSFGHELRACLRCRLVKTYDQFRESGCENC FFKMDEDHERVVDCTTPN
Sbjct: 1   MGS--AAAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCSFFKMDEDHERVVDCTTPN 58

Query: 64  FTGIISVMDPSRSWAARWLRI 2
           FTGIISVMDPSRSWAARWLRI
Sbjct: 59  FTGIISVMDPSRSWAARWLRI 79


>ref|XP_006360853.1| PREDICTED: transcription elongation factor SPT4 homolog 2-like
           [Solanum tuberosum]
          Length = 116

 Score =  161 bits (408), Expect = 7e-38
 Identities = 75/81 (92%), Positives = 77/81 (95%)
 Frame = -3

Query: 244 MGSNAPAAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPN 65
           MGS    AQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPN
Sbjct: 1   MGSQP--AQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPN 58

Query: 64  FTGIISVMDPSRSWAARWLRI 2
           FTG+ISVMDP+RSWAARWLRI
Sbjct: 59  FTGLISVMDPTRSWAARWLRI 79


>ref|XP_002270173.1| PREDICTED: transcription elongation factor SPT4 homolog 2 [Vitis
           vinifera] gi|297742714|emb|CBI35348.3| unnamed protein
           product [Vitis vinifera]
          Length = 114

 Score =  161 bits (408), Expect = 7e-38
 Identities = 73/75 (97%), Positives = 74/75 (98%)
 Frame = -3

Query: 226 AAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFTGIIS 47
           AAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNF GIIS
Sbjct: 4   AAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIIS 63

Query: 46  VMDPSRSWAARWLRI 2
           +MDPSRSWAARWLRI
Sbjct: 64  MMDPSRSWAARWLRI 78


>ref|XP_006448501.1| hypothetical protein CICLE_v10017231mg [Citrus clementina]
           gi|567912377|ref|XP_006448502.1| hypothetical protein
           CICLE_v10017231mg [Citrus clementina]
           gi|568828704|ref|XP_006468680.1| PREDICTED:
           transcription elongation factor SPT4 homolog 2-like
           [Citrus sinensis] gi|557551112|gb|ESR61741.1|
           hypothetical protein CICLE_v10017231mg [Citrus
           clementina] gi|557551113|gb|ESR61742.1| hypothetical
           protein CICLE_v10017231mg [Citrus clementina]
          Length = 115

 Score =  160 bits (406), Expect = 1e-37
 Identities = 77/81 (95%), Positives = 78/81 (96%)
 Frame = -3

Query: 244 MGSNAPAAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPN 65
           MGS APA QIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPN
Sbjct: 1   MGS-APA-QIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPN 58

Query: 64  FTGIISVMDPSRSWAARWLRI 2
           F GIISVMDP+RSWAARWLRI
Sbjct: 59  FNGIISVMDPTRSWAARWLRI 79


>ref|XP_002513156.1| suppressor of ty, putative [Ricinus communis]
           gi|223548167|gb|EEF49659.1| suppressor of ty, putative
           [Ricinus communis]
          Length = 116

 Score =  160 bits (404), Expect = 2e-37
 Identities = 72/74 (97%), Positives = 73/74 (98%)
 Frame = -3

Query: 223 AQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFTGIISV 44
           AQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNF GIISV
Sbjct: 6   AQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISV 65

Query: 43  MDPSRSWAARWLRI 2
           MDP+RSWAARWLRI
Sbjct: 66  MDPTRSWAARWLRI 79


>ref|XP_004502081.1| PREDICTED: transcription elongation factor SPT4 homolog 1-like
           [Cicer arietinum]
          Length = 117

 Score =  159 bits (402), Expect = 4e-37
 Identities = 74/81 (91%), Positives = 77/81 (95%)
 Frame = -3

Query: 244 MGSNAPAAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPN 65
           MGS AP AQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKM++D ERVVDCTTPN
Sbjct: 1   MGS-APPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMEDDQERVVDCTTPN 59

Query: 64  FTGIISVMDPSRSWAARWLRI 2
           F GIISVMDP+RSWAARWLRI
Sbjct: 60  FNGIISVMDPTRSWAARWLRI 80


>ref|XP_004156922.1| PREDICTED: uncharacterized LOC101210450 [Cucumis sativus]
          Length = 1093

 Score =  159 bits (401), Expect = 5e-37
 Identities = 73/79 (92%), Positives = 77/79 (97%)
 Frame = -3

Query: 238 SNAPAAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFT 59
           ++APA QIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVV+CTTPNF 
Sbjct: 2   ASAPA-QIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVECTTPNFN 60

Query: 58  GIISVMDPSRSWAARWLRI 2
           GIISVMDP+RSWAARWLRI
Sbjct: 61  GIISVMDPARSWAARWLRI 79


>ref|XP_004145631.1| PREDICTED: transcription elongation factor SPT4 homolog 2-like
           [Cucumis sativus]
          Length = 116

 Score =  159 bits (401), Expect = 5e-37
 Identities = 73/79 (92%), Positives = 77/79 (97%)
 Frame = -3

Query: 238 SNAPAAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFT 59
           ++APA QIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVV+CTTPNF 
Sbjct: 2   ASAPA-QIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVECTTPNFN 60

Query: 58  GIISVMDPSRSWAARWLRI 2
           GIISVMDP+RSWAARWLRI
Sbjct: 61  GIISVMDPARSWAARWLRI 79


>gb|EOX99006.1| Transcription elongation factor SPT4 isoform 3 [Theobroma cacao]
          Length = 110

 Score =  157 bits (398), Expect = 1e-36
 Identities = 76/81 (93%), Positives = 77/81 (95%)
 Frame = -3

Query: 244 MGSNAPAAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPN 65
           MGS APA QIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTT N
Sbjct: 1   MGS-APA-QIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTAN 58

Query: 64  FTGIISVMDPSRSWAARWLRI 2
           F GIISVMDP+RSWAARWLRI
Sbjct: 59  FNGIISVMDPTRSWAARWLRI 79


>gb|EOX99005.1| Transcription elongation factor SPT4 isoform 2 [Theobroma cacao]
          Length = 116

 Score =  157 bits (398), Expect = 1e-36
 Identities = 76/81 (93%), Positives = 77/81 (95%)
 Frame = -3

Query: 244 MGSNAPAAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPN 65
           MGS APA QIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTT N
Sbjct: 1   MGS-APA-QIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTAN 58

Query: 64  FTGIISVMDPSRSWAARWLRI 2
           F GIISVMDP+RSWAARWLRI
Sbjct: 59  FNGIISVMDPTRSWAARWLRI 79


>gb|EOX99004.1| Transcription elongation factor SPT4 isoform 1 [Theobroma cacao]
          Length = 102

 Score =  157 bits (398), Expect = 1e-36
 Identities = 76/81 (93%), Positives = 77/81 (95%)
 Frame = -3

Query: 244 MGSNAPAAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPN 65
           MGS APA QIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTT N
Sbjct: 1   MGS-APA-QIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTAN 58

Query: 64  FTGIISVMDPSRSWAARWLRI 2
           F GIISVMDP+RSWAARWLRI
Sbjct: 59  FNGIISVMDPTRSWAARWLRI 79


>gb|EXB96339.1| hypothetical protein L484_023056 [Morus notabilis]
          Length = 125

 Score =  156 bits (394), Expect = 3e-36
 Identities = 75/88 (85%), Positives = 80/88 (90%)
 Frame = -3

Query: 265 KEEEATAMGSNAPAAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERV 86
           +E E+T +G  APA QIPTSFGHELRACLRCRLVKTYDQFRESGCENC FFKMDED+ERV
Sbjct: 3   RERESTRVGI-APA-QIPTSFGHELRACLRCRLVKTYDQFRESGCENCSFFKMDEDNERV 60

Query: 85  VDCTTPNFTGIISVMDPSRSWAARWLRI 2
            DCTTPNF GIISVMDP+RSWAARWLRI
Sbjct: 61  ADCTTPNFNGIISVMDPARSWAARWLRI 88


>ref|NP_001238307.1| uncharacterized protein LOC100306659 [Glycine max]
           gi|571531935|ref|XP_006600129.1| PREDICTED:
           uncharacterized protein LOC100306659 isoform X1 [Glycine
           max] gi|255629207|gb|ACU14948.1| unknown [Glycine max]
          Length = 116

 Score =  155 bits (392), Expect = 5e-36
 Identities = 70/74 (94%), Positives = 72/74 (97%)
 Frame = -3

Query: 223 AQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFTGIISV 44
           AQIPTSFGHELRACLRCRLVKTYDQFRESGCENC FFKM+EDHERVVDCTTPNF GIISV
Sbjct: 6   AQIPTSFGHELRACLRCRLVKTYDQFRESGCENCSFFKMEEDHERVVDCTTPNFNGIISV 65

Query: 43  MDPSRSWAARWLRI 2
           MDP+RSWAARWLRI
Sbjct: 66  MDPNRSWAARWLRI 79


>gb|ESW25065.1| hypothetical protein PHAVU_003G004200g [Phaseolus vulgaris]
          Length = 116

 Score =  155 bits (391), Expect = 7e-36
 Identities = 70/74 (94%), Positives = 72/74 (97%)
 Frame = -3

Query: 223 AQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFTGIISV 44
           AQIPTSFGHELRACLRCRLVKTYDQFRESGCENC FFKM+EDHERVV+CTTPNF GIISV
Sbjct: 6   AQIPTSFGHELRACLRCRLVKTYDQFRESGCENCQFFKMEEDHERVVECTTPNFNGIISV 65

Query: 43  MDPSRSWAARWLRI 2
           MDPSRSWAARWLRI
Sbjct: 66  MDPSRSWAARWLRI 79


>gb|ESW33428.1| hypothetical protein PHAVU_001G068300g [Phaseolus vulgaris]
          Length = 116

 Score =  154 bits (388), Expect = 2e-35
 Identities = 69/74 (93%), Positives = 72/74 (97%)
 Frame = -3

Query: 223 AQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFTGIISV 44
           AQIPTSFGHELRACLRCRLVKTYDQFRESGCENC FFKM+EDHERVV+CTTPNF GIISV
Sbjct: 6   AQIPTSFGHELRACLRCRLVKTYDQFRESGCENCQFFKMEEDHERVVECTTPNFNGIISV 65

Query: 43  MDPSRSWAARWLRI 2
           MDP+RSWAARWLRI
Sbjct: 66  MDPTRSWAARWLRI 79


>gb|AFK41664.1| unknown [Lotus japonicus]
          Length = 115

 Score =  153 bits (387), Expect = 2e-35
 Identities = 68/74 (91%), Positives = 71/74 (95%)
 Frame = -3

Query: 223 AQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFTGIISV 44
           AQIPTSFGHELRACLRCRLVKTYDQFR+SGCENC FFKM+EDHER+ DCTTPNF GIISV
Sbjct: 6   AQIPTSFGHELRACLRCRLVKTYDQFRDSGCENCQFFKMEEDHERIADCTTPNFNGIISV 65

Query: 43  MDPSRSWAARWLRI 2
           MDPSRSWAARWLRI
Sbjct: 66  MDPSRSWAARWLRI 79


>ref|XP_006288742.1| hypothetical protein CARUB_v10002059mg [Capsella rubella]
           gi|482557448|gb|EOA21640.1| hypothetical protein
           CARUB_v10002059mg [Capsella rubella]
          Length = 153

 Score =  152 bits (385), Expect = 3e-35
 Identities = 72/86 (83%), Positives = 78/86 (90%)
 Frame = -3

Query: 259 EEATAMGSNAPAAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVD 80
           EE + MG  APA QIPTSFGHELRACLRCRLVKTYDQFR+SGCENCPFFKM++DHER+VD
Sbjct: 33  EEKSQMGE-APA-QIPTSFGHELRACLRCRLVKTYDQFRDSGCENCPFFKMEDDHERIVD 90

Query: 79  CTTPNFTGIISVMDPSRSWAARWLRI 2
            TTPNF GIIS+MDP RSWAARWLRI
Sbjct: 91  VTTPNFNGIISMMDPRRSWAARWLRI 116


>ref|XP_003529703.1| PREDICTED: transcription elongation factor SPT4 homolog 1-like
           [Glycine max]
          Length = 116

 Score =  152 bits (385), Expect = 3e-35
 Identities = 69/74 (93%), Positives = 71/74 (95%)
 Frame = -3

Query: 223 AQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFTGIISV 44
           AQIPTSFGHELRACLRCRLVKTYDQFRESGCENC FFKM+EDHE VVDCTTPNF GIISV
Sbjct: 6   AQIPTSFGHELRACLRCRLVKTYDQFRESGCENCSFFKMEEDHELVVDCTTPNFNGIISV 65

Query: 43  MDPSRSWAARWLRI 2
           MDP+RSWAARWLRI
Sbjct: 66  MDPNRSWAARWLRI 79