BLASTX nr result

ID: Catharanthus23_contig00011088 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00011088
         (489 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006340553.1| PREDICTED: two-component response regulator-...    64   5e-10
ref|XP_004237533.1| PREDICTED: two-component response regulator-...    64   2e-09
emb|CAN81386.1| hypothetical protein VITISV_012325 [Vitis vinifera]    63   3e-09
ref|XP_006828277.1| hypothetical protein AMTR_s00023p00221340 [A...    52   1e-05

>ref|XP_006340553.1| PREDICTED: two-component response regulator-like PRR37-like
           [Solanum tuberosum]
          Length = 783

 Score = 64.3 bits (155), Expect(2) = 5e-10
 Identities = 29/60 (48%), Positives = 40/60 (66%)
 Frame = -1

Query: 285 MRGIRGDTDHLPTKGLAEINNDYVQHDHSSVRNGVMGDGNGISDEDESRVNEDANEGTES 106
           MR +R D++  PTK L E+N   +Q   + VR G+ GDG G+S+EDESR+NED   G E+
Sbjct: 1   MRSVRMDSNGPPTKRLVELNCHSIQDGQNGVRGGITGDGQGLSEEDESRINEDVEGGNET 60



 Score = 25.0 bits (53), Expect(2) = 5e-10
 Identities = 14/38 (36%), Positives = 17/38 (44%)
 Frame = -3

Query: 115 HRELVQARGALHSXXXXXXXXXXXXXXXPVVRWERFLP 2
           HR LVQ +  L +                +VRWERFLP
Sbjct: 61  HRNLVQVQAVLQTQQQQPPGP--------LVRWERFLP 90


>ref|XP_004237533.1| PREDICTED: two-component response regulator-like PRR37-like
           [Solanum lycopersicum]
          Length = 781

 Score = 64.3 bits (155), Expect(2) = 2e-09
 Identities = 29/60 (48%), Positives = 40/60 (66%)
 Frame = -1

Query: 285 MRGIRGDTDHLPTKGLAEINNDYVQHDHSSVRNGVMGDGNGISDEDESRVNEDANEGTES 106
           MR +R D+   PTK L E+N   +Q   + VR+G+ GDG G+S+EDESR+NED   G E+
Sbjct: 1   MRSVRMDSIGPPTKRLVELNRHSIQDGQNGVRDGITGDGQGLSEEDESRINEDVEGGNET 60



 Score = 23.1 bits (48), Expect(2) = 2e-09
 Identities = 8/9 (88%), Positives = 9/9 (100%)
 Frame = -3

Query: 28  VVRWERFLP 2
           +VRWERFLP
Sbjct: 82  LVRWERFLP 90


>emb|CAN81386.1| hypothetical protein VITISV_012325 [Vitis vinifera]
          Length = 240

 Score = 62.8 bits (151), Expect(2) = 3e-09
 Identities = 30/76 (39%), Positives = 50/76 (65%)
 Frame = -1

Query: 345 GFLANSISCFIRHWSFLIWLMRGIRGDTDHLPTKGLAEINNDYVQHDHSSVRNGVMGDGN 166
           GF+ N++     H +F IW MR    + +   TKG AE+N+ + Q +  ++R+ V+G+G+
Sbjct: 96  GFIVNTL--LSHHHAFSIWFMRSFEMNVNGPWTKGSAELNH-HAQDEQKNIRDKVVGEGH 152

Query: 165 GISDEDESRVNEDANE 118
           G+S+EDESR+NED  +
Sbjct: 153 GLSEEDESRINEDVED 168



 Score = 23.9 bits (50), Expect(2) = 3e-09
 Identities = 8/9 (88%), Positives = 9/9 (100%)
 Frame = -3

Query: 28  VVRWERFLP 2
           +VRWERFLP
Sbjct: 195 IVRWERFLP 203


>ref|XP_006828277.1| hypothetical protein AMTR_s00023p00221340 [Amborella trichopoda]
           gi|548832924|gb|ERM95693.1| hypothetical protein
           AMTR_s00023p00221340 [Amborella trichopoda]
          Length = 784

 Score = 52.0 bits (123), Expect(2) = 1e-05
 Identities = 23/42 (54%), Positives = 34/42 (80%)
 Frame = -1

Query: 246 KGLAEINNDYVQHDHSSVRNGVMGDGNGISDEDESRVNEDAN 121
           +GLAE NN + + +H  VR+G+MG+G G+S+EDESR+NE A+
Sbjct: 14  EGLAEFNN-HKRDEHGPVRDGIMGEGQGLSEEDESRINEAAD 54



 Score = 22.7 bits (47), Expect(2) = 1e-05
 Identities = 8/9 (88%), Positives = 9/9 (100%)
 Frame = -3

Query: 28  VVRWERFLP 2
           VV+WERFLP
Sbjct: 87  VVQWERFLP 95


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