BLASTX nr result
ID: Catharanthus23_contig00011063
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00011063
(1176 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN82939.1| hypothetical protein VITISV_013126 [Vitis vinifera] 53 4e-08
emb|CAN83738.1| hypothetical protein VITISV_014440 [Vitis vinifera] 52 8e-08
emb|CAN61586.1| hypothetical protein VITISV_042821 [Vitis vinifera] 51 2e-07
emb|CAN66193.1| hypothetical protein VITISV_013311 [Vitis vinifera] 49 4e-07
emb|CAN64923.1| hypothetical protein VITISV_017202 [Vitis vinifera] 49 5e-07
emb|CAN74759.1| hypothetical protein VITISV_011400 [Vitis vinifera] 47 2e-06
ref|NP_001175316.1| Os07g0649700 [Oryza sativa Japonica Group] g... 49 5e-06
gb|EEC77962.1| hypothetical protein OsI_17322 [Oryza sativa Indi... 49 5e-06
gb|AAD37021.1| putative non-LTR retrolelement reverse transcript... 58 7e-06
emb|CAN81751.1| hypothetical protein VITISV_026939 [Vitis vinifera] 48 8e-06
ref|XP_002267683.2| PREDICTED: uncharacterized protein LOC100249... 48 8e-06
emb|CCA66188.1| hypothetical protein [Beta vulgaris subsp. vulga... 58 9e-06
>emb|CAN82939.1| hypothetical protein VITISV_013126 [Vitis vinifera]
Length = 2416
Score = 52.8 bits (125), Expect(2) = 4e-08
Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 3/97 (3%)
Frame = -1
Query: 930 TLIQSSISSIPLHFMWRVLLPKTTVNAINKSSEISL---GII*P*KGLHLIKWDMVTLPK 760
TLI+S+++SIP++F+ + +PK+ I K + L G + + HLIKW +V PK
Sbjct: 1475 TLIKSTLASIPIYFLSLIRIPKSVTKRIEKIQKDFLWGGGSLE--RKAHLIKWKVVCSPK 1532
Query: 759 QSGGLQLKKR*IAKPSITNKWSLEILPNYENTHGKII 649
+ GGL ++K + ++ KW EN ++I
Sbjct: 1533 EEGGLGIRKIDLLNKALLGKWVWRYAYEKENLWKRVI 1569
Score = 32.7 bits (73), Expect(2) = 4e-08
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = -2
Query: 1052 YVGFPLYHHRPKTQDFSRVSQKIQAKLANWITKYLTHVGRV 930
Y+G PL H + + V ++++ +LA W +Y++ GR+
Sbjct: 1434 YLGLPLGAHHKTSSSWDGVEERMRRRLAQWKKQYISKGGRI 1474
>emb|CAN83738.1| hypothetical protein VITISV_014440 [Vitis vinifera]
Length = 666
Score = 51.6 bits (122), Expect(2) = 8e-08
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
Frame = -1
Query: 930 TLIQSSISSIPLHFMWRVLLPKTTVNAINKSSEISL---GII*P*KGLHLIKWDMVTLPK 760
TLI+S+++SIP++F+ + +PK+ I K L G + + HLIKW +V PK
Sbjct: 430 TLIKSTLASIPIYFLSLIRIPKSVTKRIEKIQRDFLWGGGSLE--RKAHLIKWKVVCSPK 487
Query: 759 QSGGLQLKKR*IAKPSITNKWSLEILPNYENTHGKIIKKQVSSK 628
+ GGL ++K + ++ KW EN +I + K
Sbjct: 488 EEGGLGIRKIDLLNKALLGKWVWRYAYEKENLWKMVIGVKYGQK 531
Score = 32.7 bits (73), Expect(2) = 8e-08
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = -2
Query: 1052 YVGFPLYHHRPKTQDFSRVSQKIQAKLANWITKYLTHVGRV 930
Y+G PL H + + V ++++ +LA W +Y++ GR+
Sbjct: 389 YLGLPLGAHHKTSSSWDGVEERMRRRLAQWKRQYISKGGRI 429
>emb|CAN61586.1| hypothetical protein VITISV_042821 [Vitis vinifera]
Length = 1302
Score = 50.8 bits (120), Expect(2) = 2e-07
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Frame = -1
Query: 930 TLIQSSISSIPLHFMWRVLLPKTTVNAINKSSEISL---GII*P*KGLHLIKWDMVTLPK 760
TLI+S+++SIP++F+ + +PK+ I K L G + + HLIKW +V PK
Sbjct: 979 TLIKSTLASIPIYFLSLIXIPKSVTKRIEKIQRDFLWGGGSLE--RKAHLIKWKVVCSPK 1036
Query: 759 QSGGLQLKKR*IAKPSITNKWSLEILPNYENTHGKII 649
+ GGL ++K + + KW EN +I
Sbjct: 1037 EEGGLGIRKIDLLNKXLLGKWVWRYAYEKENLWKMVI 1073
Score = 32.3 bits (72), Expect(2) = 2e-07
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = -2
Query: 1052 YVGFPLYHHRPKTQDFSRVSQKIQAKLANWITKYLTHVGRV 930
Y+G PL H + + V ++++ +LA W +Y++ GR+
Sbjct: 938 YLGLPLGAHHKTSSXWDGVEERMRRRLAQWKRQYISKGGRI 978
>emb|CAN66193.1| hypothetical protein VITISV_013311 [Vitis vinifera]
Length = 1222
Score = 49.3 bits (116), Expect(2) = 4e-07
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Frame = -1
Query: 930 TLIQSSISSIPLHFMWRVLLPKTTVNAINKSSEISL---GII*P*KGLHLIKWDMVTLPK 760
TLI+S+++ IP++F+ + +PK+ I K L G + + HLIKW +V PK
Sbjct: 936 TLIKSTLAXIPIYFLSLIRIPKSVTKRIEKIQRDFLWGGGSLE--RKAHLIKWKVVCSPK 993
Query: 759 QSGGLQLKKR*IAKPSITNKWSLEILPNYENTHGKII 649
+ GGL ++K + ++ KW EN +I
Sbjct: 994 EEGGLGIRKIDLLNKALLGKWVWRYAYEKENLWKMVI 1030
Score = 32.7 bits (73), Expect(2) = 4e-07
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = -2
Query: 1052 YVGFPLYHHRPKTQDFSRVSQKIQAKLANWITKYLTHVGRV 930
Y+G PL H + + V ++++ +LA W +Y++ GR+
Sbjct: 895 YLGLPLGAHHKTSSSWDGVEERMRRRLAQWKRQYISKGGRI 935
>emb|CAN64923.1| hypothetical protein VITISV_017202 [Vitis vinifera]
Length = 739
Score = 48.9 bits (115), Expect(2) = 5e-07
Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Frame = -1
Query: 930 TLIQSSISSIPLHFMWRVLLPKTTVNAINKSSEISL-GII*P*KGLHLIKWDMVTLPKQS 754
TLI+S+++SIP++F+ + +PK+ I K L G + HLIKW +V K+
Sbjct: 402 TLIKSTLASIPIYFLSLIRIPKSVTKRIEKIQRDFLWGGGRLERKAHLIKWKVVCSLKEE 461
Query: 753 GGLQLKKR*IAKPSITNKWSLEILPNYENTHGKII 649
GGL ++K + ++ KW EN ++I
Sbjct: 462 GGLGIRKIDVLNKALLGKWVWRYAYEKENLWKRVI 496
Score = 32.7 bits (73), Expect(2) = 5e-07
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = -2
Query: 1052 YVGFPLYHHRPKTQDFSRVSQKIQAKLANWITKYLTHVGRV 930
Y+G PL H + + V ++++ +LA W +Y++ GR+
Sbjct: 361 YLGLPLGAHHKTSSSWDGVEERMRRRLAQWKRQYISKGGRI 401
>emb|CAN74759.1| hypothetical protein VITISV_011400 [Vitis vinifera]
Length = 1540
Score = 47.0 bits (110), Expect(2) = 2e-06
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Frame = -1
Query: 930 TLIQSSISSIPLHFMWRVLLPKTTVNAINKSSEISLGII*P*KG-LHLIKWDMVTLPKQS 754
TLI+S+++SIP++ + + +PK I K L +G +HLI W +V PK+
Sbjct: 1259 TLIKSTLASIPIYLLSLIRIPKAVAKRIEKIQRDFLWGGGSLEGKVHLINWKVVYSPKEE 1318
Query: 753 GGLQLKKR*IAKPSITNKW 697
GGL ++K + ++ KW
Sbjct: 1319 GGLGIRKIDLLNKALLGKW 1337
Score = 32.7 bits (73), Expect(2) = 2e-06
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = -2
Query: 1052 YVGFPLYHHRPKTQDFSRVSQKIQAKLANWITKYLTHVGRV 930
Y+G PL H + + V ++++ +LA W +Y++ GR+
Sbjct: 1218 YLGLPLGAHHKTSSSWDGVEERMRRRLAQWKMQYISKGGRI 1258
>ref|NP_001175316.1| Os07g0649700 [Oryza sativa Japonica Group]
gi|255678022|dbj|BAH94044.1| Os07g0649700 [Oryza sativa
Japonica Group]
Length = 1509
Score = 48.5 bits (114), Expect(2) = 5e-06
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Frame = -1
Query: 957 QILDPCRKSTLIQSSISSIPLHFMWRVLLPKTTVNAINKSSEISL--GII*P*KGLHLIK 784
++L P + LI+S ++++P+HFM ++LPK + NK L G G L+
Sbjct: 1192 KLLSPDGRLRLIKSVLTALPVHFMSVLVLPKWAIKEFNKKCRAFLWKGQEEVNGGHCLVA 1251
Query: 783 WDMVTLPKQSGGLQLKKR*IAKPSITNKW 697
WD+V PK+ GGL +K + ++ KW
Sbjct: 1252 WDIVCSPKECGGLGVKNLELFGQAMRMKW 1280
Score = 29.6 bits (65), Expect(2) = 5e-06
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -2
Query: 1052 YVGFPLYHHRPKTQDFSRVSQKIQAKLANWITKYLTHVGRV 930
Y+G PL RP + + ++ K+A W K L+ GR+
Sbjct: 1160 YLGLPLSLRRPTKAEVQPILDRLSKKVAGWKPKLLSPDGRL 1200
>gb|EEC77962.1| hypothetical protein OsI_17322 [Oryza sativa Indica Group]
Length = 1104
Score = 48.5 bits (114), Expect(2) = 5e-06
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Frame = -1
Query: 957 QILDPCRKSTLIQSSISSIPLHFMWRVLLPKTTVNAINKSSEISL--GII*P*KGLHLIK 784
++L P + LI+S ++++P+HFM ++LPK + NK L G G L+
Sbjct: 787 KLLSPDGRLRLIKSVLTALPVHFMSVLVLPKWAIKEFNKKCRAFLWKGQEEVNGGHCLVA 846
Query: 783 WDMVTLPKQSGGLQLKKR*IAKPSITNKW 697
WD+V PK+ GGL +K + ++ KW
Sbjct: 847 WDIVCSPKECGGLGVKNLELFGQAMRMKW 875
Score = 29.6 bits (65), Expect(2) = 5e-06
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -2
Query: 1052 YVGFPLYHHRPKTQDFSRVSQKIQAKLANWITKYLTHVGRV 930
Y+G PL RP + + ++ K+A W K L+ GR+
Sbjct: 755 YLGLPLSLRRPTKAEVQPILDRLSKKVAGWKPKLLSPDGRL 795
>gb|AAD37021.1| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
thaliana]
Length = 732
Score = 58.2 bits (139), Expect = 7e-06
Identities = 44/169 (26%), Positives = 79/169 (46%), Gaps = 2/169 (1%)
Frame = -1
Query: 1146 KSKVIFSNNINWNLTEKISDLLSVKEA-VCWKICRVPTLSS*A*NSRFLQSQSENSG*TC 970
KSK+ FS N++ +L + ISD + K +P L F + +
Sbjct: 243 KSKIFFSENVSRDLGKLISDESGISSTRELGKYLGMPVLQRRINKDTFGDILEKLTTRLA 302
Query: 969 KLDNQILDPCRKSTLIQSSISSIPLHFMWRVLLPKTTVNAINKSSEISL-GII*P*KGLH 793
+ L + TL ++ +SSIP+H M + LPK+T++ ++K S L G + H
Sbjct: 303 GWKGRFLSLAGRVTLTKAVLSSIPVHTMSTIALPKSTLDGLDKVSRSFLWGSSVTQRKQH 362
Query: 792 LIKWDMVTLPKQSGGLQLKKR*IAKPSITNKWSLEILPNYENTHGKIIK 646
LI W V P+ GGL ++K ++ +K ++ +Y + +I++
Sbjct: 363 LISWKRVCKPRSEGGLGIRKAQDMNKALLSKVGWRLIQDYHSLWARIMR 411
>emb|CAN81751.1| hypothetical protein VITISV_026939 [Vitis vinifera]
Length = 1653
Score = 48.1 bits (113), Expect(2) = 8e-06
Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Frame = -1
Query: 936 KSTLIQSSISSIPLHFMWRVLLPKTTVNAINKSSEISL--GII*P*KGLHLIKWDMVTLP 763
+ TLI+S+++SIP++ + + +PK I K L G KG HLI W +V P
Sbjct: 1377 RMTLIKSTLASIPIYLLSLIRIPKVVAKRIEKIQRDFLWGGGSLEGKG-HLINWQVVCSP 1435
Query: 762 KQSGGLQLKKR*IAKPSITNKW 697
K+ GGL ++K + ++ KW
Sbjct: 1436 KEEGGLGIRKIDLLNKTLLGKW 1457
Score = 29.3 bits (64), Expect(2) = 8e-06
Identities = 11/41 (26%), Positives = 23/41 (56%)
Frame = -2
Query: 1052 YVGFPLYHHRPKTQDFSRVSQKIQAKLANWITKYLTHVGRV 930
Y+G PL + + V ++++ +LA W +Y++ GR+
Sbjct: 1338 YLGLPLGANHKNASSWDGVEERMRRRLAQWKRQYISKGGRM 1378
>ref|XP_002267683.2| PREDICTED: uncharacterized protein LOC100249836 [Vitis vinifera]
Length = 1552
Score = 48.1 bits (113), Expect(2) = 8e-06
Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Frame = -1
Query: 936 KSTLIQSSISSIPLHFMWRVLLPKTTVNAINKSSEISL--GII*P*KGLHLIKWDMVTLP 763
+ TLI+S+++SIP++ + + +PK I K L G KG HLI W +V P
Sbjct: 335 RMTLIKSTLASIPIYLLSLIRIPKVVAKRIEKIQRDFLWGGGSLEGKG-HLINWQVVCSP 393
Query: 762 KQSGGLQLKKR*IAKPSITNKW 697
K+ GGL ++K + ++ KW
Sbjct: 394 KEEGGLGIRKIDLLNKTLLGKW 415
Score = 29.3 bits (64), Expect(2) = 8e-06
Identities = 11/41 (26%), Positives = 23/41 (56%)
Frame = -2
Query: 1052 YVGFPLYHHRPKTQDFSRVSQKIQAKLANWITKYLTHVGRV 930
Y+G PL + + V ++++ +LA W +Y++ GR+
Sbjct: 296 YLGLPLGANHKNASSWDGVEERMRRRLAQWKRQYISKGGRM 336
>emb|CCA66188.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1381
Score = 57.8 bits (138), Expect = 9e-06
Identities = 39/120 (32%), Positives = 60/120 (50%), Gaps = 7/120 (5%)
Frame = -1
Query: 957 QILDPCRKSTLIQSSISSIPLHFMWRVLLPKTTVNAINK-------SSEISLGII*P*KG 799
++L + TLI++SISS+PL++M P+ + AINK S E+
Sbjct: 778 RMLSIAGRITLIKASISSLPLYYMSLFPAPRGVIEAINKLQRNFLWSGELRK------SS 831
Query: 798 LHLIKWDMVTLPKQSGGLQLKKR*IAKPSITNKWSLEILPNYENTHGKIIKKQVSSKHTT 619
L L+ W+ V LPK+SGGL S+ KW + + E+ K+IK++ HTT
Sbjct: 832 LALVAWNQVVLPKESGGLNCGNLLNRNISLLFKWIWRLSHDPESLWQKVIKEKYGYSHTT 891