BLASTX nr result

ID: Catharanthus23_contig00010488 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00010488
         (764 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXB38835.1| hypothetical protein L484_027269 [Morus notabilis]      60   6e-07
gb|AFK48658.1| unknown [Lotus japonicus]                               60   6e-07
ref|XP_006369291.1| hypothetical protein POPTR_0001s20740g [Popu...    57   5e-06
ref|XP_002329022.1| predicted protein [Populus trichocarpa] gi|5...    57   5e-06

>gb|EXB38835.1| hypothetical protein L484_027269 [Morus notabilis]
          Length = 608

 Score = 60.5 bits (145), Expect = 6e-07
 Identities = 41/107 (38%), Positives = 55/107 (51%), Gaps = 11/107 (10%)
 Frame = +1

Query: 73  PPSGHQVPTAPQLRRMKFGWRALLFCNFALGAYLFTVPKKKGSYEE----------KRSG 222
           PPS    P     RR K  WRALL  N ALGAY+F  PKKK ++ E          K S 
Sbjct: 10  PPSP---PKESLTRRNKLIWRALLISNLALGAYMFARPKKKDAHVENNRKASEKGVKDSK 66

Query: 223 AEEASHIP-VETTIHYEEPVYSPPPSDPTGMQQQSTPKDQEQDLFGW 360
           AEE   +  ++T   Y+ P   PPP+      ++  P+DQ+++LF W
Sbjct: 67  AEEEVDLSNIKTMPIYDTPT-PPPPAVEHAKVRELIPEDQQRELFKW 112


>gb|AFK48658.1| unknown [Lotus japonicus]
          Length = 173

 Score = 60.5 bits (145), Expect = 6e-07
 Identities = 42/117 (35%), Positives = 58/117 (49%), Gaps = 11/117 (9%)
 Frame = +1

Query: 43  KRMEGARKYVPPSGHQVPT-APQ---------LRRMKFGWRALLFCNFALGAYLFTVPKK 192
           K+ +G  K+  P G    T AP           RR K+ W  LL  N  +GAYLF   KK
Sbjct: 23  KQSKGQHKFSSPPGMGTQTTAPPPPPPPKESFARRYKYLWPMLLAVNLGVGAYLFVRTKK 82

Query: 193 KGSYEEKRSGAEEASHIPV-ETTIHYEEPVYSPPPSDPTGMQQQSTPKDQEQDLFGW 360
           K   EE+    ++AS +PV ET  H  E   SP P     ++++  P DQ+++LF W
Sbjct: 83  KDIGEEE----QDASPVPVKETVAHVAETRVSPAPIASPVIEREPIPVDQQRELFKW 135


>ref|XP_006369291.1| hypothetical protein POPTR_0001s20740g [Populus trichocarpa]
           gi|550347750|gb|ERP65860.1| hypothetical protein
           POPTR_0001s20740g [Populus trichocarpa]
          Length = 176

 Score = 57.4 bits (137), Expect = 5e-06
 Identities = 34/102 (33%), Positives = 52/102 (50%)
 Frame = +1

Query: 55  GARKYVPPSGHQVPTAPQLRRMKFGWRALLFCNFALGAYLFTVPKKKGSYEEKRSGAEEA 234
           G++   PP   Q P     RR KF W  +L  N ++GAYLF   KKK + +E+   ++  
Sbjct: 38  GSQSTAPPPPPQPPKESFARRYKFLWPLILTVNLSVGAYLFMRTKKKDTVQEEEVSSKIP 97

Query: 235 SHIPVETTIHYEEPVYSPPPSDPTGMQQQSTPKDQEQDLFGW 360
           S  P  T    E P+ SP  S+   +  +   +DQ+++LF W
Sbjct: 98  SSTPSTTAPVSETPIPSPTISEVVKL-CEPIREDQQRELFKW 138


>ref|XP_002329022.1| predicted protein [Populus trichocarpa]
           gi|566150045|ref|XP_006369292.1| hypothetical protein
           POPTR_0001s20740g [Populus trichocarpa]
           gi|550347751|gb|ERP65861.1| hypothetical protein
           POPTR_0001s20740g [Populus trichocarpa]
          Length = 189

 Score = 57.4 bits (137), Expect = 5e-06
 Identities = 34/102 (33%), Positives = 52/102 (50%)
 Frame = +1

Query: 55  GARKYVPPSGHQVPTAPQLRRMKFGWRALLFCNFALGAYLFTVPKKKGSYEEKRSGAEEA 234
           G++   PP   Q P     RR KF W  +L  N ++GAYLF   KKK + +E+   ++  
Sbjct: 51  GSQSTAPPPPPQPPKESFARRYKFLWPLILTVNLSVGAYLFMRTKKKDTVQEEEVSSKIP 110

Query: 235 SHIPVETTIHYEEPVYSPPPSDPTGMQQQSTPKDQEQDLFGW 360
           S  P  T    E P+ SP  S+   +  +   +DQ+++LF W
Sbjct: 111 SSTPSTTAPVSETPIPSPTISEVVKL-CEPIREDQQRELFKW 151


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