BLASTX nr result
ID: Catharanthus23_contig00010436
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00010436
(1002 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006344504.1| PREDICTED: putative F-box protein At1g65770-... 76 2e-11
ref|XP_006368067.1| PREDICTED: F-box protein SKIP23-like [Solanu... 74 9e-11
ref|XP_006344379.1| PREDICTED: F-box protein SKIP23-like [Solanu... 74 9e-11
ref|XP_004236527.1| PREDICTED: putative F-box protein At2g16290-... 73 2e-10
ref|XP_004236020.1| PREDICTED: F-box protein At2g17690-like [Sol... 72 3e-10
ref|XP_006343858.1| PREDICTED: putative F-box protein At3g25750-... 72 4e-10
ref|XP_004237592.1| PREDICTED: F-box protein At2g26160-like [Sol... 72 4e-10
ref|XP_004237591.1| PREDICTED: F-box protein At2g26160-like [Sol... 72 4e-10
ref|XP_006344380.1| PREDICTED: putative F-box protein At2g16290-... 71 6e-10
ref|XP_006343855.1| PREDICTED: probable F-box protein At1g65740-... 71 6e-10
ref|XP_006344414.1| PREDICTED: putative F-box protein At5g55150-... 70 1e-09
ref|XP_006353316.1| PREDICTED: F-box protein At2g17690-like [Sol... 69 3e-09
ref|XP_006343854.1| PREDICTED: probable F-box protein At1g65740-... 69 3e-09
ref|XP_004245513.1| PREDICTED: F-box protein At2g17036-like [Sol... 69 3e-09
ref|XP_006345154.1| PREDICTED: probable F-box protein At1g65740-... 68 5e-09
ref|XP_006343853.1| PREDICTED: F-box protein At2g17036-like [Sol... 68 5e-09
ref|XP_004236567.1| PREDICTED: probable F-box protein At1g65740-... 68 6e-09
ref|XP_006440155.1| hypothetical protein CICLE_v10024484mg [Citr... 67 8e-09
ref|XP_006355340.1| PREDICTED: F-box protein At2g26160-like isof... 65 5e-08
ref|XP_006366271.1| PREDICTED: F-box protein At2g26160-like isof... 63 2e-07
>ref|XP_006344504.1| PREDICTED: putative F-box protein At1g65770-like [Solanum tuberosum]
Length = 399
Score = 76.3 bits (186), Expect = 2e-11
Identities = 38/71 (53%), Positives = 48/71 (67%)
Frame = -2
Query: 1001 GRNPSVSLSASEFEGLFKPNCIYFTDDNEENFYFEPGGGGGLDMGIFNMENSTIEPHFTG 822
G N S+S+ AS+F G+ KPN IYFTDD E+ Y GGGLDMG+FN+ N +I+PH+ G
Sbjct: 325 GANASISVQASQFPGI-KPNHIYFTDDFFES-YLSYEEGGGLDMGVFNLANGSIQPHYNG 382
Query: 821 ESRSPISPPFW 789
S S PP W
Sbjct: 383 VSLSRFCPPTW 393
>ref|XP_006368067.1| PREDICTED: F-box protein SKIP23-like [Solanum tuberosum]
Length = 251
Score = 73.9 bits (180), Expect = 9e-11
Identities = 35/71 (49%), Positives = 48/71 (67%)
Frame = -2
Query: 1001 GRNPSVSLSASEFEGLFKPNCIYFTDDNEENFYFEPGGGGGLDMGIFNMENSTIEPHFTG 822
G N S+S+ AS+F G+ KPN IY+TDD E++ F GGG DMG++N+ N + EPH+ G
Sbjct: 177 GANASISVQASQFPGV-KPNHIYYTDDFVESYLFYEEGGGR-DMGVYNIANGSFEPHYNG 234
Query: 821 ESRSPISPPFW 789
S S + PP W
Sbjct: 235 VSLSRVCPPIW 245
>ref|XP_006344379.1| PREDICTED: F-box protein SKIP23-like [Solanum tuberosum]
Length = 390
Score = 73.9 bits (180), Expect = 9e-11
Identities = 35/71 (49%), Positives = 48/71 (67%)
Frame = -2
Query: 1001 GRNPSVSLSASEFEGLFKPNCIYFTDDNEENFYFEPGGGGGLDMGIFNMENSTIEPHFTG 822
G N S+S+ AS+F G+ KPN IY+TDD E++ F GGG DMG++N+ N + EPH+ G
Sbjct: 316 GANASISVQASQFPGV-KPNHIYYTDDFVESYLFYEEGGGR-DMGVYNIANGSFEPHYNG 373
Query: 821 ESRSPISPPFW 789
S S + PP W
Sbjct: 374 VSLSRVCPPIW 384
>ref|XP_004236527.1| PREDICTED: putative F-box protein At2g16290-like [Solanum
lycopersicum]
Length = 295
Score = 73.2 bits (178), Expect = 2e-10
Identities = 35/71 (49%), Positives = 47/71 (66%)
Frame = -2
Query: 1001 GRNPSVSLSASEFEGLFKPNCIYFTDDNEENFYFEPGGGGGLDMGIFNMENSTIEPHFTG 822
G N S+S+ AS F G+ KPN IY+TDD E+ Y GGG+DMG++N+ N + EPH+ G
Sbjct: 221 GANASISVQASHFPGV-KPNHIYYTDDFVES-YLSYEEGGGMDMGVYNIANCSFEPHYNG 278
Query: 821 ESRSPISPPFW 789
S S + PP W
Sbjct: 279 VSLSRVCPPIW 289
>ref|XP_004236020.1| PREDICTED: F-box protein At2g17690-like [Solanum lycopersicum]
Length = 399
Score = 72.4 bits (176), Expect = 3e-10
Identities = 36/71 (50%), Positives = 47/71 (66%)
Frame = -2
Query: 1001 GRNPSVSLSASEFEGLFKPNCIYFTDDNEENFYFEPGGGGGLDMGIFNMENSTIEPHFTG 822
G N S+S+ AS+ G+ KPN IYFTDD E+ Y GGGLDMG+FN+ + +I+PH+ G
Sbjct: 325 GANASISVQASQCTGI-KPNHIYFTDDFYES-YLSYDEGGGLDMGVFNLADGSIQPHYRG 382
Query: 821 ESRSPISPPFW 789
S S PP W
Sbjct: 383 VSLSRFCPPIW 393
>ref|XP_006343858.1| PREDICTED: putative F-box protein At3g25750-like [Solanum tuberosum]
Length = 385
Score = 71.6 bits (174), Expect = 4e-10
Identities = 36/71 (50%), Positives = 47/71 (66%)
Frame = -2
Query: 1001 GRNPSVSLSASEFEGLFKPNCIYFTDDNEENFYFEPGGGGGLDMGIFNMENSTIEPHFTG 822
G N S+S+ AS+F G+ KPN IYFTD N Y GGGLDMG+FN+ + +I+PH+ G
Sbjct: 311 GANASLSVQASQFPGI-KPNHIYFTD-NCLGAYLHFEEGGGLDMGVFNLADGSIQPHYAG 368
Query: 821 ESRSPISPPFW 789
S S + PP W
Sbjct: 369 VSLSRVCPPIW 379
>ref|XP_004237592.1| PREDICTED: F-box protein At2g26160-like [Solanum lycopersicum]
Length = 461
Score = 71.6 bits (174), Expect = 4e-10
Identities = 37/77 (48%), Positives = 47/77 (61%)
Frame = -2
Query: 1001 GRNPSVSLSASEFEGLFKPNCIYFTDDNEENFYFEPGGGGGLDMGIFNMENSTIEPHFTG 822
G N S S+ AS+F G+ KPN IYFTD N Y GGGLDMG+FN+ +S+ +PH+ G
Sbjct: 387 GANASFSVQASQFPGI-KPNHIYFTD-NCLGAYLHSETGGGLDMGMFNLADSSFQPHYDG 444
Query: 821 ESRSPISPPFWYL*KFC 771
S S + PP W C
Sbjct: 445 VSLSRVCPPIWVTPTLC 461
>ref|XP_004237591.1| PREDICTED: F-box protein At2g26160-like [Solanum lycopersicum]
Length = 392
Score = 71.6 bits (174), Expect = 4e-10
Identities = 37/77 (48%), Positives = 47/77 (61%)
Frame = -2
Query: 1001 GRNPSVSLSASEFEGLFKPNCIYFTDDNEENFYFEPGGGGGLDMGIFNMENSTIEPHFTG 822
G N S S+ AS+F G+ KPN IYFTD N Y GGGLDMG+FN+ +S+ +PH+ G
Sbjct: 318 GANASFSVQASQFPGI-KPNHIYFTD-NCLGAYLHSKRGGGLDMGMFNLADSSFQPHYDG 375
Query: 821 ESRSPISPPFWYL*KFC 771
S S + PP W C
Sbjct: 376 VSLSRVCPPIWVTPTLC 392
>ref|XP_006344380.1| PREDICTED: putative F-box protein At2g16290-like [Solanum tuberosum]
Length = 249
Score = 71.2 bits (173), Expect = 6e-10
Identities = 34/71 (47%), Positives = 47/71 (66%)
Frame = -2
Query: 1001 GRNPSVSLSASEFEGLFKPNCIYFTDDNEENFYFEPGGGGGLDMGIFNMENSTIEPHFTG 822
G N S+S+ AS+ G+ KPN IY+TDD E+ Y GGG+DMG++N+ N + EPH+ G
Sbjct: 175 GANASISVQASQSPGV-KPNHIYYTDDFVES-YLSYEEGGGMDMGVYNIANGSFEPHYNG 232
Query: 821 ESRSPISPPFW 789
S S + PP W
Sbjct: 233 VSLSRVCPPIW 243
>ref|XP_006343855.1| PREDICTED: probable F-box protein At1g65740-like isoform X1 [Solanum
tuberosum] gi|565353899|ref|XP_006343856.1| PREDICTED:
probable F-box protein At1g65740-like isoform X2 [Solanum
tuberosum]
Length = 387
Score = 71.2 bits (173), Expect = 6e-10
Identities = 36/71 (50%), Positives = 48/71 (67%)
Frame = -2
Query: 1001 GRNPSVSLSASEFEGLFKPNCIYFTDDNEENFYFEPGGGGGLDMGIFNMENSTIEPHFTG 822
G N S+S+ AS+F G+ KPN IYFTD N + Y GG GLDMG+FN+ + +I+PH+ G
Sbjct: 313 GPNASISVQASQFPGI-KPNHIYFTD-NCLSAYLRFEGGCGLDMGVFNLVDESIQPHYDG 370
Query: 821 ESRSPISPPFW 789
S S + PP W
Sbjct: 371 VSLSRVCPPIW 381
>ref|XP_006344414.1| PREDICTED: putative F-box protein At5g55150-like [Solanum tuberosum]
Length = 393
Score = 70.1 bits (170), Expect = 1e-09
Identities = 38/75 (50%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
Frame = -2
Query: 1001 GRNPSVSLSASEFEGLFKPNCIYFTDDNEENFYFEP----GGGGGLDMGIFNMENSTIEP 834
G N S+S+ AS+F G+ KPN IYFTD YF GGGG DMG+FN+ + +I+P
Sbjct: 319 GYNASLSVQASKFLGI-KPNHIYFTDH-----YFRSCLAYEGGGGFDMGVFNLADGSIQP 372
Query: 833 HFTGESRSPISPPFW 789
H+ G S S ISPP W
Sbjct: 373 HYNGVSLSRISPPTW 387
>ref|XP_006353316.1| PREDICTED: F-box protein At2g17690-like [Solanum tuberosum]
Length = 393
Score = 68.9 bits (167), Expect = 3e-09
Identities = 35/71 (49%), Positives = 45/71 (63%)
Frame = -2
Query: 1001 GRNPSVSLSASEFEGLFKPNCIYFTDDNEENFYFEPGGGGGLDMGIFNMENSTIEPHFTG 822
G N S+S+ AS + G+ KPN IYFTDD E Y GGGLDMG+FN+ + +I+PH+
Sbjct: 319 GANASLSVQASRYPGI-KPNHIYFTDDFYET-YMSYEEGGGLDMGVFNLADGSIQPHYND 376
Query: 821 ESRSPISPPFW 789
S S PP W
Sbjct: 377 VSLSRFCPPTW 387
>ref|XP_006343854.1| PREDICTED: probable F-box protein At1g65740-like [Solanum tuberosum]
Length = 393
Score = 68.9 bits (167), Expect = 3e-09
Identities = 35/71 (49%), Positives = 46/71 (64%)
Frame = -2
Query: 1001 GRNPSVSLSASEFEGLFKPNCIYFTDDNEENFYFEPGGGGGLDMGIFNMENSTIEPHFTG 822
G N S+S+ AS+F G+ KPN IYFTD N Y G GLDMG+FN+ + +I+PH+ G
Sbjct: 319 GHNSSISVQASQFPGI-KPNHIYFTD-NCLCLYLHLREGCGLDMGVFNLADESIQPHYDG 376
Query: 821 ESRSPISPPFW 789
S S + PP W
Sbjct: 377 VSLSRVCPPIW 387
>ref|XP_004245513.1| PREDICTED: F-box protein At2g17036-like [Solanum lycopersicum]
Length = 389
Score = 68.9 bits (167), Expect = 3e-09
Identities = 36/71 (50%), Positives = 46/71 (64%)
Frame = -2
Query: 1001 GRNPSVSLSASEFEGLFKPNCIYFTDDNEENFYFEPGGGGGLDMGIFNMENSTIEPHFTG 822
G N S+S+ AS+F G+ KPNCIYFTD N Y G GLDMG+FN+ + +IEP + G
Sbjct: 316 GANASLSIQASQFPGI-KPNCIYFTD-NWIGAYLFFEKGCGLDMGVFNLADGSIEPFYDG 373
Query: 821 ESRSPISPPFW 789
S S + PP W
Sbjct: 374 ISVSRVCPPIW 384
>ref|XP_006345154.1| PREDICTED: probable F-box protein At1g65740-like [Solanum tuberosum]
Length = 340
Score = 68.2 bits (165), Expect = 5e-09
Identities = 35/71 (49%), Positives = 45/71 (63%)
Frame = -2
Query: 1001 GRNPSVSLSASEFEGLFKPNCIYFTDDNEENFYFEPGGGGGLDMGIFNMENSTIEPHFTG 822
G N S+S+ AS G+ KPN IYFT+D E Y GGGLDMG+FN+ + +I+PH+ G
Sbjct: 266 GANASLSVQASRCPGI-KPNHIYFTEDFYET-YLSYEEGGGLDMGVFNLADGSIQPHYNG 323
Query: 821 ESRSPISPPFW 789
S S PP W
Sbjct: 324 VSLSRFCPPTW 334
>ref|XP_006343853.1| PREDICTED: F-box protein At2g17036-like [Solanum tuberosum]
Length = 389
Score = 68.2 bits (165), Expect = 5e-09
Identities = 36/71 (50%), Positives = 46/71 (64%)
Frame = -2
Query: 1001 GRNPSVSLSASEFEGLFKPNCIYFTDDNEENFYFEPGGGGGLDMGIFNMENSTIEPHFTG 822
G N S+S+ AS+F G+ KPNCIYFTD N Y G GLDMG+FN+ + +IEP + G
Sbjct: 316 GANASLSIQASQFPGI-KPNCIYFTD-NWIGAYLFFKKGCGLDMGVFNLADGSIEPLYDG 373
Query: 821 ESRSPISPPFW 789
S S + PP W
Sbjct: 374 ISVSRVCPPIW 384
>ref|XP_004236567.1| PREDICTED: probable F-box protein At1g65740-like isoform 1 [Solanum
lycopersicum]
Length = 423
Score = 67.8 bits (164), Expect = 6e-09
Identities = 35/71 (49%), Positives = 45/71 (63%)
Frame = -2
Query: 1001 GRNPSVSLSASEFEGLFKPNCIYFTDDNEENFYFEPGGGGGLDMGIFNMENSTIEPHFTG 822
G N S+S+ A +F G+ KPN IYFTDD Y GGGLDMG+FN+ + +I+PH+ G
Sbjct: 349 GANSSLSVQACQFPGI-KPNHIYFTDDCFLT-YLAYEEGGGLDMGVFNLADGSIQPHYNG 406
Query: 821 ESRSPISPPFW 789
S S PP W
Sbjct: 407 VSLSRFCPPTW 417
>ref|XP_006440155.1| hypothetical protein CICLE_v10024484mg [Citrus clementina]
gi|557542417|gb|ESR53395.1| hypothetical protein
CICLE_v10024484mg [Citrus clementina]
Length = 362
Score = 67.4 bits (163), Expect = 8e-09
Identities = 33/71 (46%), Positives = 45/71 (63%)
Frame = -2
Query: 1001 GRNPSVSLSASEFEGLFKPNCIYFTDDNEENFYFEPGGGGGLDMGIFNMENSTIEPHFTG 822
G N S S+ AS K NCIYFTDD + +++ GGG DMGI++++ TIEP F G
Sbjct: 288 GHNSSFSVDASISH--CKANCIYFTDDCVDAYWYIACKGGGKDMGIYDLQEETIEPFFKG 345
Query: 821 ESRSPISPPFW 789
+S + I+PP W
Sbjct: 346 DSYNRITPPMW 356
>ref|XP_006355340.1| PREDICTED: F-box protein At2g26160-like isoform X1 [Solanum
tuberosum] gi|565377770|ref|XP_006355341.1| PREDICTED:
F-box protein At2g26160-like isoform X2 [Solanum
tuberosum] gi|565377772|ref|XP_006355342.1| PREDICTED:
F-box protein At2g26160-like isoform X3 [Solanum
tuberosum] gi|565377774|ref|XP_006355343.1| PREDICTED:
F-box protein At2g26160-like isoform X4 [Solanum
tuberosum]
Length = 395
Score = 64.7 bits (156), Expect = 5e-08
Identities = 36/78 (46%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Frame = -2
Query: 1001 GRNPSVSLSASEFEGLFKPNCIYFTDDNEENF-YFEPGGGGGLDMGIFNMENSTIEPHFT 825
G N S S+ AS F G+ KPN IYF D+ + YFE GGG L MG+FN+ + +I+PH+
Sbjct: 321 GANASFSVQASLFPGI-KPNHIYFADNCLGAYLYFEEGGG--LYMGVFNLADGSIQPHYD 377
Query: 824 GESRSPISPPFWYL*KFC 771
G S S + PP W C
Sbjct: 378 GVSPSRVCPPIWVTPTLC 395
>ref|XP_006366271.1| PREDICTED: F-box protein At2g26160-like isoform X1 [Solanum
tuberosum] gi|565401574|ref|XP_006366272.1| PREDICTED:
F-box protein At2g26160-like isoform X2 [Solanum
tuberosum] gi|565401576|ref|XP_006366273.1| PREDICTED:
F-box protein At2g26160-like isoform X3 [Solanum
tuberosum] gi|565401578|ref|XP_006366274.1| PREDICTED:
F-box protein At2g26160-like isoform X4 [Solanum
tuberosum] gi|565401580|ref|XP_006366275.1| PREDICTED:
F-box protein At2g26160-like isoform X5 [Solanum
tuberosum]
Length = 368
Score = 63.2 bits (152), Expect = 2e-07
Identities = 32/71 (45%), Positives = 42/71 (59%)
Frame = -2
Query: 1001 GRNPSVSLSASEFEGLFKPNCIYFTDDNEENFYFEPGGGGGLDMGIFNMENSTIEPHFTG 822
GRN + ++ KPN IYFTDD E+ YF GGG DMG++N EN +E ++G
Sbjct: 297 GRNGATAMVTG-----LKPNHIYFTDDVFES-YFALEAGGGKDMGVYNFENGKVESFYSG 350
Query: 821 ESRSPISPPFW 789
S SP+ PP W
Sbjct: 351 VSLSPVCPPTW 361