BLASTX nr result
ID: Catharanthus23_contig00010355
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00010355
(282 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMJ25313.1| hypothetical protein PRUPE_ppa015679mg [Prunus pe... 85 9e-15
ref|XP_006354470.1| PREDICTED: dentin sialophosphoprotein-like [... 84 2e-14
ref|XP_004247930.1| PREDICTED: uncharacterized protein LOC101262... 81 1e-13
ref|XP_004297831.1| PREDICTED: uncharacterized protein LOC101296... 80 2e-13
gb|EOY06088.1| RNA-binding (RRM/RBD/RNP motifs) family protein [... 74 2e-11
ref|XP_002883427.1| nucleic acid binding protein [Arabidopsis ly... 71 1e-10
ref|NP_188979.2| RNA recognition motif-containing protein [Arabi... 70 3e-10
ref|NP_001118682.1| RNA recognition motif-containing protein [Ar... 70 3e-10
ref|XP_006406035.1| hypothetical protein EUTSA_v10020149mg [Eutr... 69 6e-10
ref|XP_006297030.1| hypothetical protein CARUB_v10013033mg [Caps... 67 2e-09
ref|XP_002314482.2| hypothetical protein POPTR_0010s08070g [Popu... 65 7e-09
>gb|EMJ25313.1| hypothetical protein PRUPE_ppa015679mg [Prunus persica]
Length = 835
Score = 85.1 bits (209), Expect = 9e-15
Identities = 39/55 (70%), Positives = 46/55 (83%)
Frame = +2
Query: 8 IPTALVKNPTRTVVIKKLTHDISSRHIEAALTFCGSNITGFFLGSSSSAAYVEFE 172
+P AL+KNPTRTV+IK LTHDIS H++ AL FCGS I+ FFLGSSSS A+VEFE
Sbjct: 627 LPVALIKNPTRTVMIKHLTHDISLHHLKGALAFCGSGISSFFLGSSSSVAFVEFE 681
>ref|XP_006354470.1| PREDICTED: dentin sialophosphoprotein-like [Solanum tuberosum]
Length = 928
Score = 84.0 bits (206), Expect = 2e-14
Identities = 38/59 (64%), Positives = 47/59 (79%)
Frame = +2
Query: 2 PSIPTALVKNPTRTVVIKKLTHDISSRHIEAALTFCGSNITGFFLGSSSSAAYVEFEVI 178
P +PT+LVK+P+RTV+IK+L H++S IE L FCGSNITG F GSSSS AYVEFE +
Sbjct: 716 PEVPTSLVKHPSRTVMIKELKHNVSFHDIEEVLAFCGSNITGIFFGSSSSVAYVEFETV 774
>ref|XP_004247930.1| PREDICTED: uncharacterized protein LOC101262563 [Solanum
lycopersicum]
Length = 851
Score = 81.3 bits (199), Expect = 1e-13
Identities = 37/59 (62%), Positives = 47/59 (79%)
Frame = +2
Query: 2 PSIPTALVKNPTRTVVIKKLTHDISSRHIEAALTFCGSNITGFFLGSSSSAAYVEFEVI 178
P +PT+LVK+P+RTV+IK+L H++S IE AL FC SNITG + GSSSS AYVEFE +
Sbjct: 639 PEVPTSLVKHPSRTVMIKELKHNVSFHDIEEALAFCRSNITGIYFGSSSSVAYVEFETV 697
>ref|XP_004297831.1| PREDICTED: uncharacterized protein LOC101296092 [Fragaria vesca
subsp. vesca]
Length = 736
Score = 80.5 bits (197), Expect = 2e-13
Identities = 38/57 (66%), Positives = 45/57 (78%)
Frame = +2
Query: 2 PSIPTALVKNPTRTVVIKKLTHDISSRHIEAALTFCGSNITGFFLGSSSSAAYVEFE 172
P +P LVK+PTRTV+IK+LTHDIS ++ AL FCGS I+ FLGSSSS AYVEFE
Sbjct: 520 PEVPLMLVKSPTRTVMIKQLTHDISLHQLKEALAFCGSGISSVFLGSSSSVAYVEFE 576
>gb|EOY06088.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Theobroma cacao]
Length = 245
Score = 73.9 bits (180), Expect = 2e-11
Identities = 34/57 (59%), Positives = 44/57 (77%)
Frame = +2
Query: 2 PSIPTALVKNPTRTVVIKKLTHDISSRHIEAALTFCGSNITGFFLGSSSSAAYVEFE 172
P P ALVKNPT+TV +K+L+ DISS+ ++ AL FC S I+ F+LGS+SS YVEFE
Sbjct: 164 PDAPVALVKNPTKTVKVKQLSEDISSQQLKEALAFCQSGISSFYLGSTSSVLYVEFE 220
>ref|XP_002883427.1| nucleic acid binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297329267|gb|EFH59686.1| nucleic acid binding protein
[Arabidopsis lyrata subsp. lyrata]
Length = 785
Score = 71.2 bits (173), Expect = 1e-10
Identities = 35/57 (61%), Positives = 41/57 (71%)
Frame = +2
Query: 2 PSIPTALVKNPTRTVVIKKLTHDISSRHIEAALTFCGSNITGFFLGSSSSAAYVEFE 172
P +P ALVK P+RTV I LTHD SS I+ AL FC SNI+ F LGSS + A+VEFE
Sbjct: 576 PDVPVALVKEPSRTVKIHPLTHDFSSNQIKEALKFCRSNISKFILGSSRTDAFVEFE 632
>ref|NP_188979.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|11994322|dbj|BAB02281.1| unnamed protein product
[Arabidopsis thaliana] gi|332643236|gb|AEE76757.1| RNA
recognition motif-containing protein [Arabidopsis
thaliana]
Length = 811
Score = 70.1 bits (170), Expect = 3e-10
Identities = 35/57 (61%), Positives = 40/57 (70%)
Frame = +2
Query: 2 PSIPTALVKNPTRTVVIKKLTHDISSRHIEAALTFCGSNITGFFLGSSSSAAYVEFE 172
P +P ALVK P RTV I LTHD SS I+ AL FC SNI+ F LGSS + A+VEFE
Sbjct: 602 PDVPVALVKEPARTVKIHPLTHDFSSNQIKEALKFCRSNISKFTLGSSRTDAFVEFE 658
>ref|NP_001118682.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332643237|gb|AEE76758.1| RNA recognition
motif-containing protein [Arabidopsis thaliana]
Length = 771
Score = 70.1 bits (170), Expect = 3e-10
Identities = 35/57 (61%), Positives = 40/57 (70%)
Frame = +2
Query: 2 PSIPTALVKNPTRTVVIKKLTHDISSRHIEAALTFCGSNITGFFLGSSSSAAYVEFE 172
P +P ALVK P RTV I LTHD SS I+ AL FC SNI+ F LGSS + A+VEFE
Sbjct: 562 PDVPVALVKEPARTVKIHPLTHDFSSNQIKEALKFCRSNISKFTLGSSRTDAFVEFE 618
>ref|XP_006406035.1| hypothetical protein EUTSA_v10020149mg [Eutrema salsugineum]
gi|557107181|gb|ESQ47488.1| hypothetical protein
EUTSA_v10020149mg [Eutrema salsugineum]
Length = 730
Score = 68.9 bits (167), Expect = 6e-10
Identities = 34/57 (59%), Positives = 41/57 (71%)
Frame = +2
Query: 2 PSIPTALVKNPTRTVVIKKLTHDISSRHIEAALTFCGSNITGFFLGSSSSAAYVEFE 172
P +P AL+K PTRTV I L H ISS I+ AL FC S+I+ F LGSS +AA+VEFE
Sbjct: 523 PDVPIALLKEPTRTVKIHPLAHGISSNQIKEALRFCRSDISKFILGSSKTAAFVEFE 579
>ref|XP_006297030.1| hypothetical protein CARUB_v10013033mg [Capsella rubella]
gi|482565739|gb|EOA29928.1| hypothetical protein
CARUB_v10013033mg [Capsella rubella]
Length = 764
Score = 67.4 bits (163), Expect = 2e-09
Identities = 32/57 (56%), Positives = 39/57 (68%)
Frame = +2
Query: 2 PSIPTALVKNPTRTVVIKKLTHDISSRHIEAALTFCGSNITGFFLGSSSSAAYVEFE 172
P +P ALVK P RT I +THD SS I+ AL FC SNI+ F LGS+ + A+VEFE
Sbjct: 552 PDVPIALVKEPARTAKIHPMTHDFSSNQIKEALRFCRSNISKFILGSAGTDAFVEFE 608
>ref|XP_002314482.2| hypothetical protein POPTR_0010s08070g [Populus trichocarpa]
gi|550329344|gb|EEF00653.2| hypothetical protein
POPTR_0010s08070g [Populus trichocarpa]
Length = 696
Score = 65.5 bits (158), Expect = 7e-09
Identities = 36/55 (65%), Positives = 42/55 (76%)
Frame = +2
Query: 8 IPTALVKNPTRTVVIKKLTHDISSRHIEAALTFCGSNITGFFLGSSSSAAYVEFE 172
I ALVK+PTRTV IK+LT DISS ++ AL+FC S I FLG+SSS AYVEFE
Sbjct: 488 ISVALVKHPTRTVKIKQLTDDISSHQLKEALSFCRSGI-NVFLGASSSNAYVEFE 541