BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00010317
         (2655 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC63844.1| putative non-LTR retroelement reverse transcripta...    98   6e-51
dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]             103   3e-43
dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]             103   3e-43
dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]             100   6e-42
emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulga...    91   3e-40
emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis ...   102   1e-38
emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga...    98   2e-34
gb|EMJ28511.1| hypothetical protein PRUPE_ppa016553mg [Prunus pe...    70   4e-33
ref|XP_006490008.1| PREDICTED: uncharacterized protein LOC102624...    90   1e-32
gb|ABA98898.1| retrotransposon protein, putative, unclassified [...    64   6e-31
gb|EAZ20803.1| hypothetical protein OsJ_36426 [Oryza sativa Japo...    64   6e-31
gb|ABA96650.1| retrotransposon protein, putative, unclassified [...    65   2e-30
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga...    79   8e-30
gb|EMJ27906.1| hypothetical protein PRUPE_ppa020120mg [Prunus pe...    71   1e-28
gb|AAC26674.1| putative non-LTR retroelement reverse transcripta...    73   4e-28
gb|EEE52912.1| hypothetical protein OsJ_35521 [Oryza sativa Japo...    65   8e-28
gb|EEE50691.1| hypothetical protein OsJ_30951 [Oryza sativa Japo...    64   3e-27
emb|CAN77005.1| hypothetical protein VITISV_027306 [Vitis vinifera]    54   7e-27
gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse ...    66   1e-26
gb|AAP54617.2| retrotransposon protein, putative, unclassified [...    66   1e-26

>gb|AAC63844.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1231

 Score = 97.8 bits (242), Expect(4) = 6e-51
 Identities = 67/233 (28%), Positives = 119/233 (51%), Gaps = 12/233 (5%)
 Frame = -2

Query: 1505 SLLIIWNGGQLESFQPSRGIWK----RTFYLLICLSCVWRF*-VIIFTRRWRQ-AVGRGY 1344
            S+ ++WNG + +SF P+RG+ +      +  ++CL  +       +  R W+  AV  G 
Sbjct: 477  SMSVLWNGERTDSFVPARGLRQGDPLSPYLFVLCLERLCHLIEASVGKREWKPIAVSCGG 536

Query: 1343 GYLGRPELSDHLCFEDGFLLFGVGTEKQASVMESIVQEFC-SSWAKVST*RD-----HNC 1182
              L       H+CF D  +LF   +  Q  ++  +++ FC +S  KVS  +      HN 
Sbjct: 537  SKLS------HVCFADDLILFAEASVAQIRIIRRVLERFCEASGQKVSLEKSKIFFSHNV 590

Query: 1181 SFRKMFNQSFLSDFL*LRYSSTHDFGLYLGIPLLHRRVGKGTYHYLVEKVRKKLSAWKGC 1002
            S R+M  +  +S+   +    T + G YLG+P+L +R+ K T+  ++E+V  +L+ WKG 
Sbjct: 591  S-REM--EQLISEESGI--GCTKELGKYLGMPILQKRMNKETFGEVLERVSARLAGWKGR 645

Query: 1001 NMSMASRALLIQYSMSTVANYAMGTTLVPAHTLQLLKKANHRFQWGDLLGSSK 843
            ++S+A R  L +  +S++  + M   L+P  TL  L + +  F WG  +   K
Sbjct: 646  SLSLAGRITLTKAVLSSIPVHVMSAILLPVSTLDTLDRYSRTFLWGSTMEKKK 698



 Score = 91.3 bits (225), Expect(4) = 6e-51
 Identities = 65/256 (25%), Positives = 123/256 (48%), Gaps = 6/256 (2%)
 Frame = -3

Query: 2272 FFHASALLKQKKRNISMLRDSENRWIHDQKKMQTLVRNFFSKLYTLEACITCDTEF--GT 2099
            FFH S ++++++  I  L+  ++RW+ D+ +++ +   ++ +LY+LE           G 
Sbjct: 217  FFHTSTIIRRRRNRIESLKGDDDRWVTDKVELEAMALTYYKRLYSLEDVSEVRNMLPTGG 276

Query: 2098 FHLFLFWTSGGLTMGCWIMKLGRQYSKWVQIKLWASWFSS*FYKKKYWDIIGLSCTKFIQ 1919
            F          L       ++        + K          + ++ W+ +G S T+F+ 
Sbjct: 277  FASISEAEKAALLQAFTKAEVVSAVKSMGRFKAPGPDGYQPVFYQQCWETVGPSVTRFVL 336

Query: 1918 QAFRDVTFFRGS*CYLDYFNTEEGFPG--VGFTV*TYCTVQCPYEGHHQSIVNWLKPLMT 1745
            + F        +   L     +   P     F   + C V   ++   + +V  LK +++
Sbjct: 337  EFFETGVLPASTNDALLVLIAKVAKPERIQQFRPVSLCNVL--FKIITKMMVTRLKNVIS 394

Query: 1744 KLTGDSKSSFVLGRQAADNIILAKEVIHTMRRKK--QDLMATNIDLEKAHDRVEWDLLKK 1571
            KL G +++SF+ GR + DNI+L +E +H+MRRKK  +  M   +DLEKA+DRV WD L++
Sbjct: 395  KLIGPAQASFIPGRLSIDNIVLVQEAVHSMRRKKGRKGWMLLKLDLEKAYDRVRWDFLQE 454

Query: 1570 IL*NEGINDDFVRLIM 1523
             L   G+++ +   IM
Sbjct: 455  TLEAAGLSEGWTSRIM 470



 Score = 47.0 bits (110), Expect(4) = 6e-51
 Identities = 60/248 (24%), Positives = 99/248 (39%), Gaps = 13/248 (5%)
 Frame = -3

Query: 733  NRDQLWARVLYAK*--GDIRERDPGKTVRAASYTLHNPLEGY*-FLTQGLDWVAGDGNFI 563
            +++ LWARV+  K   G +++    K     S T  +   G    + +G+ WV GDG  I
Sbjct: 739  DKESLWARVVRKKYKVGGVQDTSWLKPQPRWSSTWRSVAVGLREVVVKGVGWVPGDGCTI 798

Query: 562  QFWMDDWLGNGKLVDLCPVLLPAEDLKKSLASHISLHLPWDQIPLVQSLPLEVLDKLQLI 383
            +FW+D WL    LV+L   ++P  +  K  A +      W+   L   LP  V  +L  +
Sbjct: 799  RFWLDRWLLQEPLVELGTDMIPEGERIKVAADYWLPGSGWNLEILGLYLPETVKRRLLSV 858

Query: 382  TPSI--GRGDGYASVGW*WQ*YLQCPFSVQGRFGTTT-S*S*MLDFGVEIRRIDAVFCSH 212
               +  G GD  +     W+      F+V+  +           + G    RI  +    
Sbjct: 859  VVQVFLGNGDEIS-----WKGTQDGAFTVRSAYSLLQGDVGDRPNMGSFFNRIWKLITPE 913

Query: 211  MASSLLWFEE*GFAGLS------WVAC*SILLLCD-CIELDMHALRDSVAASTIWKFILS 53
                 +W         +       ++  +I  +C+   E  +H LRD  A   IW+ +L 
Sbjct: 914  RVRVFIWLVSQNVIMTNVERVRRHLSENAICSVCNGAEETILHVLRDCPAMEPIWRRLLP 973

Query: 52   FPRWHGFF 29
              R H FF
Sbjct: 974  LRRHHEFF 981



 Score = 36.2 bits (82), Expect(4) = 6e-51
 Identities = 18/35 (51%), Positives = 23/35 (65%)
 Frame = -2

Query: 2372 LLLKYEGILK*EEHLWFQKSRSKWFVEGD*TTCFF 2268
            LL + + +L+ EE LWFQKSR K+   GD  T FF
Sbjct: 184  LLKEMDLVLEQEETLWFQKSREKYIELGDRNTTFF 218


>dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score =  103 bits (256), Expect(3) = 3e-43
 Identities = 78/260 (30%), Positives = 122/260 (46%), Gaps = 16/260 (6%)
 Frame = -2

Query: 1511 QASLLIIWNGGQLESFQPSRGIWKRT-----FYLLICLSCVWRF*VIIFTRRWRQA-VGR 1350
            ++SL I+WNGG+L  F+P RG+ +        + L+           +  R W+   + R
Sbjct: 616  ESSLAILWNGGRLPPFKPGRGLRQGDPLAPYLFNLVMERLAHDIQTRVNARTWKPVHITR 675

Query: 1349 GYGYLGRPELSDHLCFEDGFLLFGVGTEKQASVMESIVQEFCS-SWAKVST*RDHNCSFR 1173
            G   +       HL F D  +LFG  +E QA +M   +  F + S  KV      N S  
Sbjct: 676  GGTGIS------HLFFADDLMLFGEASEHQAQIMFDCLDSFSNASGLKV------NFSKS 723

Query: 1172 KMFNQSFLSDFL*------LRYSSTHDFGLYLGIPLLHRRVGKGTYHYLVEKVRKKLSAW 1011
             +F  S ++  L       L+       G YLGIP+L  RV + T++ +++K+R KLS+W
Sbjct: 724  LLFCSSNVNAGLKRAIGSILQVPVAESLGTYLGIPMLKERVSRNTFNAVIDKMRTKLSSW 783

Query: 1010 KGCNMSMASRALLIQYSMSTVANYAMGTTLVPAHTLQLLKKANHRFQWGDLLGSSKLLGQ 831
            K  +++MA R +L+Q S++TV  Y M    +P  T   + K    F WG    + KL   
Sbjct: 784  KASSLNMAGRRVLVQASLATVPTYTMQVMALPVSTCNEIDKTCRNFLWGHDTNTRKLHSV 843

Query: 830  RY---FNPRTVENWGLKV*R 780
             +     PR     GL++ R
Sbjct: 844  NWAEICKPRNEGGLGLRMAR 863



 Score = 81.6 bits (200), Expect(3) = 3e-43
 Identities = 77/323 (23%), Positives = 144/323 (44%), Gaps = 14/323 (4%)
 Frame = -3

Query: 2449 VGRKFVGVQ*AFERRPSNFLTELEEICF*SMKES*SKKNIYGFKSLGLNGLWRGTELHAF 2270
            +  + +G+Q A+    S  L +LE+     + E   ++    F+    + +  G     F
Sbjct: 300  IENRILGIQRAWNYNTSVRLQDLEKRLLSELNEVLVQEETLWFQKARTDWIRNGDRNTTF 359

Query: 2269 FHASALLKQKKRNISMLRDSENRWIHDQKKMQTLVRNFFSKLYTLEACITCDTEFGTFHL 2090
            +H SAL+K+ +  +  L+  +  W  D   +   + NFFS L+      +     G    
Sbjct: 360  YHRSALIKRNRNRVRFLK-LQGAWTDDADLLTEHIINFFSTLFCRVDRDSQPPRQGLPMD 418

Query: 2089 FLFWTSGGLTMGCWIMKLGRQYSKWVQ-----IKLWAS----WFSS*FYKKKYWDIIGLS 1937
            F        T+      L R   + V+     +K + S       + FY++ +W  +G +
Sbjct: 419  FQIPRDQASTL------LRRASLEEVKKAVFGMKKYGSPGPDGIPAVFYQQ-FWGEVGPA 471

Query: 1936 CTKFIQQAFRDVTFFRGS*CYLDYFNT---EEGFPGVGFTV*TYCTVQCPYEGHHQSIVN 1766
             T  +  AF + + +      L  F T   ++  P           +   ++   + +VN
Sbjct: 472  MTDMVNHAFENGSTYISQ---LQAFMTLIPKKDTPETAADFRPITLLNASFKVISKVLVN 528

Query: 1765 WLKPLMTKLTGDSKSSFVLGRQAADNIILAKEVIHTMR--RKKQDLMATNIDLEKAHDRV 1592
             L+P+M+ + G  ++SF+ GR   DN+IL +EV+H+M   R+K+  M   +DL+KA+D V
Sbjct: 529  RLRPIMSNIIGPHQNSFLPGRSTMDNVILTQEVVHSMNNPRRKKKQMILKVDLQKAYDSV 588

Query: 1591 EWDLLKKIL*NEGINDDFVRLIM 1523
             WD L++ L + G     + LI+
Sbjct: 589  SWDYLEETLEDFGFPRRLIDLIL 611



 Score = 41.2 bits (95), Expect(3) = 3e-43
 Identities = 30/118 (25%), Positives = 47/118 (39%), Gaps = 3/118 (2%)
 Frame = -3

Query: 733  NRDQLWARVL---YAK*GDIRERDPGKTVRAASYTLHNPLEGY*FLTQGLDWVAGDGNFI 563
            N D+LW +VL   Y K  D             S+   + ++G   L   + W  G+G  I
Sbjct: 880  NIDKLWVKVLREKYVKNADFLHLQSQSN---CSWGWRSIMKGKDVLAGAIKWNVGNGRKI 936

Query: 562  QFWMDDWLGNGKLVDLCPVLLPAEDLKKSLASHISLHLPWDQIPLVQSLPLEVLDKLQ 389
             FW D W+G+G L      +         +   I+    WD   L   LP  ++D ++
Sbjct: 937  NFWNDWWVGDGPLASNTDCINQPHMTDIKVEDLITSQRRWDTGALHNILPTNMIDMVR 994


>dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score =  103 bits (256), Expect(3) = 3e-43
 Identities = 78/260 (30%), Positives = 122/260 (46%), Gaps = 16/260 (6%)
 Frame = -2

Query: 1511 QASLLIIWNGGQLESFQPSRGIWKRT-----FYLLICLSCVWRF*VIIFTRRWRQA-VGR 1350
            ++SL I+WNGG+L  F+P RG+ +        + L+           +  R W+   + R
Sbjct: 616  ESSLAILWNGGRLPPFKPGRGLRQGDPLAPYLFNLVMERLAHDIQTRVNARTWKPVHITR 675

Query: 1349 GYGYLGRPELSDHLCFEDGFLLFGVGTEKQASVMESIVQEFCS-SWAKVST*RDHNCSFR 1173
            G   +       HL F D  +LFG  +E QA +M   +  F + S  KV      N S  
Sbjct: 676  GGTGIS------HLFFADDLMLFGEASEHQAQIMFDCLDSFSNASGLKV------NFSKS 723

Query: 1172 KMFNQSFLSDFL*------LRYSSTHDFGLYLGIPLLHRRVGKGTYHYLVEKVRKKLSAW 1011
             +F  S ++  L       L+       G YLGIP+L  RV + T++ +++K+R KLS+W
Sbjct: 724  LLFCSSNVNAGLKRAIGSILQVPVAESLGTYLGIPMLKERVSRNTFNAVIDKMRTKLSSW 783

Query: 1010 KGCNMSMASRALLIQYSMSTVANYAMGTTLVPAHTLQLLKKANHRFQWGDLLGSSKLLGQ 831
            K  +++MA R +L+Q S++TV  Y M    +P  T   + K    F WG    + KL   
Sbjct: 784  KASSLNMAGRRVLVQASLATVPTYTMQVMALPVSTCNEIDKTCRNFLWGHDTNTRKLHSV 843

Query: 830  RY---FNPRTVENWGLKV*R 780
             +     PR     GL++ R
Sbjct: 844  NWAEICKPRNEGGLGLRMAR 863



 Score = 81.3 bits (199), Expect(3) = 3e-43
 Identities = 77/323 (23%), Positives = 144/323 (44%), Gaps = 14/323 (4%)
 Frame = -3

Query: 2449 VGRKFVGVQ*AFERRPSNFLTELEEICF*SMKES*SKKNIYGFKSLGLNGLWRGTELHAF 2270
            +  + +G+Q A+    S  L +LE+     + E   ++    F+    + +  G     F
Sbjct: 300  IENRILGIQRAWNYNTSVRLQDLEKRLLSELNEVLVQEETLWFQKARTDWIRNGDRNTTF 359

Query: 2269 FHASALLKQKKRNISMLRDSENRWIHDQKKMQTLVRNFFSKLYTLEACITCDTEFGTFHL 2090
            +H SAL+K+ +  +  L+  +  W  D   +   + NFFS L+      +     G    
Sbjct: 360  YHRSALIKRNRNRVRFLK-LQGAWTDDADLLTEHIINFFSTLFCRVDRDSQPPRQGLPMD 418

Query: 2089 FLFWTSGGLTMGCWIMKLGRQYSKWVQ-----IKLWAS----WFSS*FYKKKYWDIIGLS 1937
            F        T+      L R   + V+     +K + S       + FY++ +W  +G +
Sbjct: 419  FQIPRDQASTL------LRRASLEEVKKAVFGMKKYGSPGPDGIPAVFYQQ-FWGEVGPA 471

Query: 1936 CTKFIQQAFRDVTFFRGS*CYLDYFNT---EEGFPGVGFTV*TYCTVQCPYEGHHQSIVN 1766
             T  +  AF + + +      L  F T   ++  P           +   ++   + +VN
Sbjct: 472  MTDMVNHAFENGSTYISQ---LQAFMTLIPKKDTPETAADFRPITLLNVSFKVISKVLVN 528

Query: 1765 WLKPLMTKLTGDSKSSFVLGRQAADNIILAKEVIHTMR--RKKQDLMATNIDLEKAHDRV 1592
             L+P+M+ + G  ++SF+ GR   DN+IL +EV+H+M   R+K+  M   +DL+KA+D V
Sbjct: 529  RLRPIMSNIIGPHQNSFLPGRSTMDNVILTQEVVHSMNNPRRKKKQMILKVDLQKAYDSV 588

Query: 1591 EWDLLKKIL*NEGINDDFVRLIM 1523
             WD L++ L + G     + LI+
Sbjct: 589  SWDYLEETLEDFGFPRRLIDLIL 611



 Score = 41.2 bits (95), Expect(3) = 3e-43
 Identities = 30/118 (25%), Positives = 47/118 (39%), Gaps = 3/118 (2%)
 Frame = -3

Query: 733  NRDQLWARVL---YAK*GDIRERDPGKTVRAASYTLHNPLEGY*FLTQGLDWVAGDGNFI 563
            N D+LW +VL   Y K  D             S+   + ++G   L   + W  G+G  I
Sbjct: 880  NIDKLWVKVLREKYVKNADFLHLQSQSN---CSWGWRSIMKGKDVLAGAIKWNVGNGRKI 936

Query: 562  QFWMDDWLGNGKLVDLCPVLLPAEDLKKSLASHISLHLPWDQIPLVQSLPLEVLDKLQ 389
             FW D W+G+G L      +         +   I+    WD   L   LP  ++D ++
Sbjct: 937  NFWNDWWVGDGPLASNTDCINQPHMTDIKVEDLITSQRRWDTGALHNILPTNMIDMVR 994


>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
          Length = 1898

 Score =  100 bits (249), Expect(3) = 6e-42
 Identities = 77/260 (29%), Positives = 121/260 (46%), Gaps = 16/260 (6%)
 Frame = -2

Query: 1511 QASLLIIWNGGQLESFQPSRGIWKRT-----FYLLICLSCVWRF*VIIFTRRWRQA-VGR 1350
            ++SL I+WNGG+   F+P RG+ +        + L+           +  R W+   + R
Sbjct: 1148 ESSLAILWNGGRPPPFKPGRGLRQGDPLVPYLFNLVMERLAHDIQTRVNARTWKPVHITR 1207

Query: 1349 GYGYLGRPELSDHLCFEDGFLLFGVGTEKQASVMESIVQEFC-SSWAKVST*RDHNCSFR 1173
            G   +       HL F D  +LFG  +E QA +M   +  F  +S  KV      N S  
Sbjct: 1208 GGTGIS------HLFFADDLMLFGEASEHQAQIMFDCLDSFSDASGLKV------NFSKS 1255

Query: 1172 KMFNQSFLSDFL*------LRYSSTHDFGLYLGIPLLHRRVGKGTYHYLVEKVRKKLSAW 1011
             +F  S ++  L       L+       G YLGIP+L  RV + T++ +++K+R KLS+W
Sbjct: 1256 LLFCSSNVNAGLKRAIGSILQVPVAESLGTYLGIPMLKERVSRNTFNAVIDKMRTKLSSW 1315

Query: 1010 KGCNMSMASRALLIQYSMSTVANYAMGTTLVPAHTLQLLKKANHRFQWGDLLGSSKLLGQ 831
            K  +++MA R +L+Q S++TV  Y M    +P  T   + K    F WG    + KL   
Sbjct: 1316 KASSLNMAGRRVLVQASLATVPTYTMQVMALPVSTCNEIDKTCRNFLWGHDTNTRKLHSV 1375

Query: 830  RY---FNPRTVENWGLKV*R 780
             +     PR     GL++ R
Sbjct: 1376 NWAEICKPRNEGGLGLRMAR 1395



 Score = 80.5 bits (197), Expect(3) = 6e-42
 Identities = 78/323 (24%), Positives = 144/323 (44%), Gaps = 14/323 (4%)
 Frame = -3

Query: 2449 VGRKFVGVQ*AFERRPSNFLTELEEICF*SMKES*SKKNIYGFKSLGLNGLWRGTELHAF 2270
            +  + +G+Q A+    S  L +LE+     + E   ++    F+    + +  G     F
Sbjct: 832  IENRILGIQRAWNYNTSVRLQDLEKRLLSELNEVLVQEETLWFQKARTDWIRNGDRNTTF 891

Query: 2269 FHASALLKQKKRNISMLRDSENRWIHDQKKMQTLVRNFFSKLYTLEACITCDTEFGTFHL 2090
            +H SAL+K+ +  +  L+  +  W  D   +   + NFFS L+      +     G    
Sbjct: 892  YHRSALIKRNRNRVRFLK-LQGAWTDDADLLTEHIINFFSTLFCRVDRDSQPPRQGLPMD 950

Query: 2089 FLFWTSGGLTMGCWIMKLGRQYSKWVQ-----IKLWAS----WFSS*FYKKKYWDIIGLS 1937
            F        T+      L R   + V+     +K + S       + FY++ +W  +G +
Sbjct: 951  FQIPRDQASTL------LRRASLEEVKKAVFGMKKYGSPGPDGIPAVFYQQ-FWGEVGPA 1003

Query: 1936 CTKFIQQAFRDVTFFRGS*CYLDYFNTEEGFPGVGFTV*TYCTVQCP---YEGHHQSIVN 1766
             T  +  AF + + +      L  F T         T   +  +  P   ++   + +VN
Sbjct: 1004 MTDMVNHAFENGSTYISQ---LQAFMTLIPKKDTPETAADFRPITLPNVSFKVISKVLVN 1060

Query: 1765 WLKPLMTKLTGDSKSSFVLGRQAADNIILAKEVIHTMR--RKKQDLMATNIDLEKAHDRV 1592
             L+P+M+ + G  ++SF+ GR   DN+IL +EV+H+M   R+K+  M   +DL+KA+D V
Sbjct: 1061 RLRPIMSNIIGPHQNSFLPGRSTMDNVILTQEVVHSMNNPRRKKKQMILKVDLQKAYDSV 1120

Query: 1591 EWDLLKKIL*NEGINDDFVRLIM 1523
             WD L++ L + G     + LI+
Sbjct: 1121 SWDYLEETLEDFGFPRRLIDLIL 1143



 Score = 40.4 bits (93), Expect(3) = 6e-42
 Identities = 29/118 (24%), Positives = 47/118 (39%), Gaps = 3/118 (2%)
 Frame = -3

Query: 733  NRDQLWARVL---YAK*GDIRERDPGKTVRAASYTLHNPLEGY*FLTQGLDWVAGDGNFI 563
            N D+LW +VL   Y K  D             S+   + ++G   L   + W  G+G  I
Sbjct: 1412 NIDKLWVKVLREKYVKNADFLHLQSQSN---CSWGWRSIMKGKDVLAGAIKWNVGNGRKI 1468

Query: 562  QFWMDDWLGNGKLVDLCPVLLPAEDLKKSLASHISLHLPWDQIPLVQSLPLEVLDKLQ 389
             FW D W+G+G L      +         +    +    WD   L   LP+ ++D ++
Sbjct: 1469 NFWNDWWVGDGPLASNTDCINQPHMTDIKVEDLTTSQRRWDTGALHNILPINMIDMVR 1526


>emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1363

 Score = 90.5 bits (223), Expect(3) = 3e-40
 Identities = 78/328 (23%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
 Frame = -3

Query: 2431 GVQ*AFERRPSNFLTELEEICF*SMKES*SKKNIYGFKSLGLNGLWRGTELHAFFHASAL 2252
            G+Q +    PS FL++LE      + E   ++ ++  +  G++    G     +FH  A 
Sbjct: 306  GIQKSLSIHPSVFLSKLEIDLLVELNELSKQERVFWAQKAGIDRAKLGDMNTKYFHTLAK 365

Query: 2251 LKQKKRNISMLRDSENRWIHDQKKMQTLVRNFFSKLYTLEACITCDTEFGTFHLFLFWTS 2072
            ++  KR IS L++  + W+ + + ++ ++ + F K++T               ++    +
Sbjct: 366  IRTCKRKISCLKNDNHDWVSNNEDLKKMMMSHFEKIFTTS-------------MYSHQRN 412

Query: 2071 GGLTMGC-----WIMKLGRQY---------SKWVQIKLWASWFSS*FYKKKYWDIIGLSC 1934
                  C     W  +L R+          ++   +K         F+ KKYW+ +G S 
Sbjct: 413  NSFRGECRISDEWNKRLARRVEEDEIKEALAQMAPLKSPGPDGIQAFFFKKYWEQMGPSV 472

Query: 1933 TKFIQQAFRDVTFFRG-S*CYLDYFNTEEG------FPGVGFTV*TYCTVQCPYEGHHQS 1775
               I +AF +     G S  +L      E       F  +G     Y  +        + 
Sbjct: 473  VSLIIRAFENNRIPSGLSDSFLALIPKIESPVCCKDFRPIGLCNTVYKMIT-------KV 525

Query: 1774 IVNWLKPLMTKLTGDSKSSFVLGRQAADNIILAKEVIHTMRRK--KQDLMATNIDLEKAH 1601
            I N +KP++ +L   S++SFV GR   +NII+AKE+    ++   K+++MA  IDL KA+
Sbjct: 526  IANRIKPILGELIHPSQTSFVPGRNIQENIIIAKEMAFLFKKSNPKRNIMALKIDLSKAY 585

Query: 1600 DRVEWDLLKKIL*NEGINDDFVRLIMKC 1517
            D +EW  +++ L         + LIM C
Sbjct: 586  DSLEWGFIRETLQGFNFPQSLIALIMDC 613



 Score = 84.3 bits (207), Expect(3) = 3e-40
 Identities = 72/267 (26%), Positives = 129/267 (48%), Gaps = 20/267 (7%)
 Frame = -2

Query: 1514 SQASLLIIWNGGQLESFQPSRGIWKRT-FYLLICLSCVWRF*VIIFTR----RWRQA-VG 1353
            S  ++ +IWNG   +SF PSRGI +       I + C+ R  ++I  R     W+   + 
Sbjct: 615  SSPAISLIWNGEVTQSFSPSRGIRQGDPLSPYIFVLCMERLSMLISDRIRDGSWKPIKIS 674

Query: 1352 RGYGYLGRPELSDHLCFEDGFLLFGVGTEKQASVMESIVQEFCS-SWAKVST*RDHNCSF 1176
               G         H+ + D   LFG  + +   V++++++EF + S  +V+  +      
Sbjct: 675  SDLGV-------SHIFYADDVFLFGQASVRNGGVIQNVLEEFGNISGLRVNMSKSLAIFP 727

Query: 1175 RKMFNQS--FLSDFL*LRYSSTHDFGLYLGIPLLHRRVGKGTYHYLVEKVRKKLSAWKGC 1002
             KM  Q    L+DFL ++ S++  FG YLG  +L  ++ +G Y  L+EKV+  ++ W+  
Sbjct: 728  PKMNPQRRRMLADFLTMKGSTS--FGKYLGCNILPNKLRRGDYDGLLEKVKSAINGWQAK 785

Query: 1001 NMSMASRALLIQYSMSTVANYAMGTTLVPAHTLQLLKKANHRFQWGDLLGS---SKLLGQ 831
             ++MA R  LI+  +S+   Y M ++L+P   +  ++K   +F W  +  S   +++   
Sbjct: 786  YLNMAGRCTLIKSVVSSFPVYGMQSSLLPVSVMNEIEKDCRKFLWNKMDKSHYLARMSWD 845

Query: 830  RYFNP--------RTVENWGLKV*RKL 774
            R  +P        R + NW L    KL
Sbjct: 846  RICSPTGKGGLGFRRLHNWNLAFMAKL 872



 Score = 40.8 bits (94), Expect(3) = 3e-40
 Identities = 33/119 (27%), Positives = 53/119 (44%), Gaps = 5/119 (4%)
 Frame = -3

Query: 724  QLWARVLYAK*GDIRERDPGKTVRAASYTLHNPL-----EGY*FLTQGLDWVAGDGNFIQ 560
            +LW R+L A     R  + G  + A     H+P+     +G   L +GL    G+G    
Sbjct: 882  KLWVRILKA-----RYWERGSFLSAVGKNHHSPIWRDIVKGRELLEKGLVRRIGNGRSTS 936

Query: 559  FWMDDWLGNGKLVDLCPVLLPAEDLKKSLASHISLHLPWDQIPLVQSLPLEVLDKLQLI 383
             W   W+G G LVD+    +P E +     S+I     WD   +   LP ++L +++ I
Sbjct: 937  LWYHWWVGGGPLVDVMGSNIP-EFMSHWQVSNIIKRGRWDTKKISHLLPPDILKQIKEI 994


>emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis thaliana]
            gi|7268307|emb|CAB78601.1| reverse transcriptase like
            protein [Arabidopsis thaliana]
          Length = 929

 Score =  102 bits (254), Expect(2) = 1e-38
 Identities = 72/267 (26%), Positives = 138/267 (51%), Gaps = 15/267 (5%)
 Frame = -3

Query: 2272 FFHASALLKQKKRNISMLRDSENRWIHDQKKMQTLVRNFFSKLYTLEACITCDTEFGTF- 2096
            FFH S ++++++  I ML+DSE+RW+ +++ ++ L  +++ KLY+LE          T  
Sbjct: 169  FFHTSTVIRRRRNRIEMLKDSEDRWVTEKEALEKLAMDYYRKLYSLEDVSVVRGTLPTEG 228

Query: 2095 ----------HLFLFWTSGGLTMGCWIMKLGRQYSKWVQIKLWASWFSS*FYKKKYWDII 1946
                      +L   +T   + +   +  +GR  +           +   FY++  W+ +
Sbjct: 229  FPRLTREEKNNLNRPFTRDEVVVA--VRSMGRFKAPG------PDGYQPVFYQQ-CWETV 279

Query: 1945 GLSCTKFIQQAFRDVTFFRGS*CYLDYFNTEEGFPG--VGFTV*TYCTVQCPYEGHHQSI 1772
            G S +KF+ + F      + +   L     +   P     F   + C V   ++   + +
Sbjct: 280  GESVSKFVMEFFESGVLPKSTNDVLLVLLAKVAKPERITQFRPVSLCNVL--FKIITKMM 337

Query: 1771 VNWLKPLMTKLTGDSKSSFVLGRQAADNIILAKEVIHTMRRKK--QDLMATNIDLEKAHD 1598
            V  LK +++KL G +++SF+ GR + DNI++ +E +H+MRRKK  +  M   +DLEKA+D
Sbjct: 338  VIRLKNVISKLIGPAQASFIPGRLSFDNIVVVQEAVHSMRRKKGRKGWMLLKLDLEKAYD 397

Query: 1597 RVEWDLLKKIL*NEGINDDFVRLIMKC 1517
            R+ WD L + L   G+++ +++ IM+C
Sbjct: 398  RIRWDFLAETLEAAGLSEGWIKRIMEC 424



 Score = 87.0 bits (214), Expect(2) = 1e-38
 Identities = 69/256 (26%), Positives = 117/256 (45%), Gaps = 11/256 (4%)
 Frame = -2

Query: 1523 EMYSQASLLIIWNGGQLESFQPSRGIWKR---TFYLLICLSCVWRF*VIIFTRRWRQAVG 1353
            E  +   + ++WNG + +SF P RG+ +    + YL +   C+ R        +   AVG
Sbjct: 423  ECVAGPEMSLLWNGEKTDSFTPERGLRQGDPISPYLFVL--CIER-----LCHQIETAVG 475

Query: 1352 RGYG-----YLGRPELSDHLCFEDGFLLFGVGTEKQASVMESIVQEFCSSWAKVST*RDH 1188
            RG         G P++S H+CF D  +LF      +ASV + +  E    +   +  RD 
Sbjct: 476  RGDWKSISISQGGPKVS-HVCFADDLILFA-----EASVAQKVSLEKSKIFFSNNVSRDL 529

Query: 1187 NCSFRKMFNQSFLSDFL*LRYSSTHDFGLYLGIPLLHRRVGKGTYHYLVEKVRKKLSAWK 1008
                                  ST + G YLG+P+L +R+ K T+  ++E+V  +LS WK
Sbjct: 530  EGLITAETG-----------IGSTRELGKYLGMPVLQKRINKDTFGEVLERVSSRLSGWK 578

Query: 1007 GCNMSMASRALLIQYSMSTVANYAMGTTLVPAHTLQLLKKANHRFQWGDLLGSSK---LL 837
              ++S+A R  L +  + ++  + M + L+PA  L+ L K +  F WG  +   K   L 
Sbjct: 579  SRSLSLAGRITLTKAVLMSIPIHTMSSILLPASLLEQLDKVSRNFLWGSTVEKRKQHLLS 638

Query: 836  GQRYFNPRTVENWGLK 789
             ++   P+     GL+
Sbjct: 639  WKKVCRPKAAGGLGLR 654


>emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1378

 Score = 97.8 bits (242), Expect(2) = 2e-34
 Identities = 70/233 (30%), Positives = 116/233 (49%), Gaps = 8/233 (3%)
 Frame = -2

Query: 1514 SQASLLIIWNGGQLESFQPSRGIWK----RTFYLLICLSCVWRF*VIIFTR-RWRQAVGR 1350
            S A+L I+WNG  +E   P+RG+ +      +  +IC+  +        T   W+     
Sbjct: 617  SSANLQILWNGEPMEKICPTRGLRQGDPLSPYLYVICMERLAHLIDQEVTNGNWKPVKAS 676

Query: 1349 GYGYLGRPELSDHLCFEDGFLLFGVGTEKQASVMESIVQEFC-SSWAKVST*RDHNCSFR 1173
              G    P +S+ L F D  +LF   + +QA VM+  +  FC +S +KV+   D +  + 
Sbjct: 677  RNG----PPISN-LAFADDLILFSEASVEQAQVMKWCLDRFCEASGSKVN--EDKSKIYF 729

Query: 1172 KMFNQSFLSDFL*--LRYSSTHDFGLYLGIPLLHRRVGKGTYHYLVEKVRKKLSAWKGCN 999
                   + D +   L   +T DFG YLG+P ++ R  K  Y YLV+++  KL+ WK   
Sbjct: 730  SANTHLDIRDAVCNTLAMEATADFGKYLGVPTINGRSSKREYQYLVDRINGKLAGWKTKT 789

Query: 998  MSMASRALLIQYSMSTVANYAMGTTLVPAHTLQLLKKANHRFQWGDLLGSSKL 840
            +S+A RA LIQ + S++  Y M +T +P  T   + + +  F WG+  G  ++
Sbjct: 790  LSIAGRATLIQSAFSSIPYYTMQSTKLPRSTCDDIDRKSRSFLWGEQEGKRRV 842



 Score = 78.2 bits (191), Expect(2) = 2e-34
 Identities = 73/322 (22%), Positives = 135/322 (41%), Gaps = 17/322 (5%)
 Frame = -3

Query: 2431 GVQ*AFERRPSNFLTELEEICF*SMKES*SKKNIYGFKSLGLNGLWRGTELHAFFHASAL 2252
            GVQ        N L +LE      M      +    F+   +  +  G     +FH S +
Sbjct: 307  GVQALLSTGRQNHLIKLEAKLRREMDIVLDDEETLWFQKSRMEAICDGDRNTRYFHLSTV 366

Query: 2251 LKQKKRNISMLRDSENRWIHDQKKMQTLVRNFFSKLYTLEACITCDTEFGTFHL----FL 2084
            +++ +  I ML++++  WI +  +++ +V  ++  L++ ++      +    HL    F 
Sbjct: 367  IRRSRNRIDMLQNNDGEWISNPMEVKAMVLGYWKHLFSEDS-----VQSNFCHLPRDFFP 421

Query: 2083 FWTSGGLTMGCWIMKLGRQYSKWVQIKL-----------WASWFSS*FYKKKYWDIIGLS 1937
              T+          K+ R  S+ V++ L               F   FY++ +WD++  +
Sbjct: 422  QITADDFE------KMMRPLSE-VEVTLALKSMKPFKAPGPDGFQPLFYQR-FWDLVKPN 473

Query: 1936 CTKFIQQAFRDVTFFRGS*CYLDYFNTEEGFPGVGFTV*TYCTVQCPYEGHHQSIVNWLK 1757
                + +      F  G          +   P +             Y+   + I+N LK
Sbjct: 474  VMHLVSEILSGRDFPEGFNDTFIVLIPKMDIPQLAKHFRPIGLCNIVYKIVTKVIINRLK 533

Query: 1756 PLMTKLTGDSKSSFVLGRQAADNIILAKEVIHTMRRK--KQDLMATNIDLEKAHDRVEWD 1583
            P++  L   ++ SFV  RQ  DN+I+ +E+ H+MR K  K+  MA  ID EKA+DR+ W 
Sbjct: 534  PILPSLISPTQCSFVPNRQITDNVIIVQEMFHSMRNKQGKKGFMAVKIDFEKAYDRLRWT 593

Query: 1582 LLKKIL*NEGINDDFVRLIMKC 1517
             +++ L    I    V ++M C
Sbjct: 594  FIRESLMELRIPQHLVDIVMNC 615


>gb|EMJ28511.1| hypothetical protein PRUPE_ppa016553mg [Prunus persica]
          Length = 992

 Score = 70.5 bits (171), Expect(6) = 4e-33
 Identities = 33/89 (37%), Positives = 57/89 (64%), Gaps = 3/89 (3%)
 Frame = -3

Query: 1774 IVNWLKPLMTKLTGDSKSSFVLGRQAADNIILAKEVIHTMRRK---KQDLMATNIDLEKA 1604
            + N LK ++ K+   S+S+ + GR  +DN ILA E+IH +RR+   K+  MA  +D+ KA
Sbjct: 166  LANRLKLILDKIISPSQSALISGRLISDNTILAAEIIHYLRRRRRGKKGFMALKMDMSKA 225

Query: 1603 HDRVEWDLLKKIL*NEGINDDFVRLIMKC 1517
            +DR+EW  L+ I+   G  + +++L++ C
Sbjct: 226  YDRIEWSFLEAIMRKLGFAEQWIQLMLTC 254



 Score = 57.0 bits (136), Expect(6) = 4e-33
 Identities = 53/233 (22%), Positives = 97/233 (41%), Gaps = 8/233 (3%)
 Frame = -2

Query: 1514 SQASLLIIWNGGQLESFQPSRGIWK----RTFYLLICLSCVWRF*VIIFTRRWRQAVGRG 1347
            S  S   + NG       PSRG+ +      +  L+C   +      +  ++ R+   +G
Sbjct: 256  STVSYSFVINGTPHGFLHPSRGLRQGDPLSPYLFLLCAEGL----TALIAQKEREGFLKG 311

Query: 1346 YGYL-GRPELSDHLCFEDGFLLFGVGTEKQASVMESIVQEFCSSWAKVST*RDHNCSFRK 1170
                 G P +S HL F D   LF          ++ I+  +  +  +    +     F K
Sbjct: 312  VSICRGAPAIS-HLFFADDSFLFAWANMADCMALKDILDTYERALGQQVNFQKSAVCFSK 370

Query: 1169 MFN---QSFLSDFL*LRYSSTHDFGLYLGIPLLHRRVGKGTYHYLVEKVRKKLSAWKGCN 999
              +   Q  L+ F+ +     H    YLG+P++  +    ++++L E++ KKL  WKG  
Sbjct: 371  NVHRGDQLMLAQFMGIPCVDHHS--QYLGLPMVLDKKKGASFNHLKERLWKKLQTWKGKL 428

Query: 998  MSMASRALLIQYSMSTVANYAMGTTLVPAHTLQLLKKANHRFQWGDLLGSSKL 840
            +S A + +LI+     +  Y M   L+P +  + L K   +F W     + K+
Sbjct: 429  LSGAGKEILIKVVAQAIPIYTMSCFLLPKYVCEDLNKLVAQFWWNSSTENKKI 481



 Score = 45.4 bits (106), Expect(6) = 4e-33
 Identities = 29/76 (38%), Positives = 44/76 (57%)
 Frame = -1

Query: 1998 GPVGFLPSFIKKNIGILLASLVQSLSNKLFEM*LFSEDLNATLITLILKKDFLELVSQFR 1819
            GP G  P F +K   I+ + + +++ + L    L  + +N T + LI K    + +SQ R
Sbjct: 92   GPDGMPPIFFQKYWHIVGSDVTRAIKDFLTSGRLLQK-INFTHVVLIPKVKHPKDMSQLR 150

Query: 1818 PIALCNVLMKVITKVL 1771
            PI+LCNVL K+ TKVL
Sbjct: 151  PISLCNVLFKIATKVL 166



 Score = 28.1 bits (61), Expect(6) = 4e-33
 Identities = 20/65 (30%), Positives = 25/65 (38%)
 Frame = -3

Query: 733 NRDQLWARVLYAK*GDIRERDPGKTVRAASYTLHNPLEGY*FLTQGLDWVAGDGNFIQFW 554
           N D L  +VL AK    R          AS    +  +    + QG  W  G G+ I  W
Sbjct: 521 NPDSLVTKVLKAKYFPTRSFLETTVSPYASVVWKSLCDARTVIIQGSRWQVGSGDTIGIW 580

Query: 553 MDDWL 539
            D WL
Sbjct: 581 EDRWL 585



 Score = 26.9 bits (58), Expect(6) = 4e-33
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -1

Query: 843 IAWAKVFQPKDCGELGFKSMKEVNCVALDRTTCRFL 736
           +AW ++  PK+ G LGF+++   N   L +   R L
Sbjct: 484 MAWDRLCAPKEEGGLGFRNLHAFNLALLAKQGWRLL 519



 Score = 22.3 bits (46), Expect(6) = 4e-33
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -2

Query: 2048 DHEIREAIFQMGSNKA 2001
            D EI EA+FQM   KA
Sbjct: 75   DAEIHEAVFQMYPTKA 90


>ref|XP_006490008.1| PREDICTED: uncharacterized protein LOC102624085 [Citrus sinensis]
          Length = 1635

 Score = 90.1 bits (222), Expect(3) = 1e-32
 Identities = 66/230 (28%), Positives = 109/230 (47%), Gaps = 11/230 (4%)
 Frame = -2

Query: 1523 EMYSQASLLIIWNGGQLESFQPSRGIWKRT-FYLLICLSCVWRF*VIIFTRRWRQAVGRG 1347
            E  + A++ ++WNG     F P RG+ +       I + C+ R      +    +++ +G
Sbjct: 1104 ECITTATMNVLWNGELSSEFCPGRGVRQGDPLSPYIFVLCIERL-----SHGISRSIQQG 1158

Query: 1346 Y------GYLGRPELSDHLCFEDGFLLFGVGTEKQASVMESIVQEF-CSSWAKVST*RD- 1191
            +        +G P    HL F D  L     + +QA ++  I+ EF  SS AKV+  +  
Sbjct: 1159 HWKPIRLARMGTP--LSHLFFADDLLFLSEASSQQAIIINKIIDEFSASSGAKVNKSKTL 1216

Query: 1190 --HNCSFRKMFNQSFLSDFL*LRYSSTHDFGLYLGIPLLHRRVGKGTYHYLVEKVRKKLS 1017
               + +   M      SD   L YS T + G YLG+PL H R+ K TY  +V+K+ ++LS
Sbjct: 1217 VYFSANISAMEASRIGSD---LGYSVTDNLGKYLGVPLCHSRISKQTYQSIVDKIDQRLS 1273

Query: 1016 AWKGCNMSMASRALLIQYSMSTVANYAMGTTLVPAHTLQLLKKANHRFQW 867
             W   ++++A R  L Q  +  ++ YAM TT +P      + +   RF W
Sbjct: 1274 GWNASHLTLAGRITLAQSVLQAISVYAMQTTKLPRSIKMKIDQLCRRFIW 1323



 Score = 74.3 bits (181), Expect(3) = 1e-32
 Identities = 41/101 (40%), Positives = 63/101 (62%), Gaps = 2/101 (1%)
 Frame = -3

Query: 1813 CTVQCPYEGHHQSIVNWLKPLMTKLTGDSKSSFVLGRQAADNIILAKEVIHTMRRKK--Q 1640
            CTV   Y+   + I N L+ L+ +L G  ++SFV GR   +NII+A+E+IH+MRRKK  +
Sbjct: 1007 CTVM--YKTITKIIANRLQELLPELIGPHQTSFVPGRHITENIIVAQEIIHSMRRKKGRK 1064

Query: 1639 DLMATNIDLEKAHDRVEWDLLKKIL*NEGINDDFVRLIMKC 1517
              MA  +DL KA+DR+ W  +++ L    +    + LIM+C
Sbjct: 1065 GFMAIKVDLGKAYDRLSWTFIQETLQELNLPTMLINLIMEC 1105



 Score = 25.8 bits (55), Expect(3) = 1e-32
 Identities = 13/53 (24%), Positives = 22/53 (41%)
 Frame = -1

Query: 843  IAWAKVFQPKDCGELGFKSMKEVNCVALDRTTCRFLLTVISFGPEFCMPSRGI 685
            + W  +  PK  G LGFK +  +N   L + T R +        +  +   G+
Sbjct: 1335 VNWDMICTPKCKGGLGFKKLDIMNHALLMKNTWRLITEPTKLSNQVLLTKYGV 1387


>gb|ABA98898.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1188

 Score = 63.5 bits (153), Expect(4) = 6e-31
 Identities = 58/225 (25%), Positives = 91/225 (40%), Gaps = 9/225 (4%)
 Frame = -2

Query: 1490 WNGGQLESFQPSRGIWK----RTFYLLICLSCVWRF*VIIFTRRWRQAVGRGYGYLGRPE 1323
            +NG  L +F PSRG+ +      F  L  +  +     ++   R  Q          R  
Sbjct: 483  FNGTLLSTFAPSRGLRQGDPLSPFLFLFVVDGL----SLLLEERVAQGALSPVHICRRAP 538

Query: 1322 LSDHLCFEDGFLLFGVGTEKQASVMESIVQEFCSSWAKVST*RDHNCSFRKMFNQSFLSD 1143
               +L F D  LLF   T +QA+V+ +++ ++  +W          CS   MF ++   D
Sbjct: 539  GISNLLFTDDTLLFFKATSEQANVVMNVLADY--AWCTGQLINQEKCSI--MFGEASPPD 594

Query: 1142 FL*-----LRYSSTHDFGLYLGIPLLHRRVGKGTYHYLVEKVRKKLSAWKGCNMSMASRA 978
                    L+  ST     YLG P    R+ KG +  L EK+ K++  W    +S   + 
Sbjct: 595  VQESVRSVLQVGSTSFDDKYLGFPTPEGRMNKGKFQSLQEKLCKRIMQWGENFLSSGGKE 654

Query: 977  LLIQYSMSTVANYAMGTTLVPAHTLQLLKKANHRFQWGDLLGSSK 843
            +LI+  +  +  Y MG   +P      L K    F WG   G  K
Sbjct: 655  ILIKAVLQAITVYVMGIFKLPDSICDELTKLTRNFWWGSEKGKRK 699



 Score = 62.4 bits (150), Expect(4) = 6e-31
 Identities = 33/96 (34%), Positives = 57/96 (59%), Gaps = 3/96 (3%)
 Frame = -3

Query: 1795 YEGHHQSIVNWLKPLMTKLTGDSKSSFVLGRQAADNIILAKEVIHTMRRKKQDLMAT--- 1625
            Y+   + +VN L+P++ +L   ++S+FV GR   DN ++A E  H++++ K+   AT   
Sbjct: 378  YKVVSKCLVNRLRPILDELISPNQSAFVPGRMITDNALIAFECFHSIQKNKKLSSATCAY 437

Query: 1624 NIDLEKAHDRVEWDLLKKIL*NEGINDDFVRLIMKC 1517
             +DL KA+DRV+W  L++ +   G    +V  IM C
Sbjct: 438  KLDLSKAYDRVDWKFLEQSMYKLGFAHCWVNWIMSC 473



 Score = 49.7 bits (117), Expect(4) = 6e-31
 Identities = 29/76 (38%), Positives = 44/76 (57%)
 Frame = -1

Query: 1998 GPVGFLPSFIKKNIGILLASLVQSLSNKLFEM*LFSEDLNATLITLILKKDFLELVSQFR 1819
            GP GF   F ++N G+L   +V+++  + F   +    +N T I LI K D    +  +R
Sbjct: 311  GPDGFPARFFQRNWGLLKEEVVKAVK-EFFNTGVMPAGVNETAIVLIPKVDQPIELRDYR 369

Query: 1818 PIALCNVLMKVITKVL 1771
            PI+LCNVL KV++K L
Sbjct: 370  PISLCNVLYKVVSKCL 385



 Score = 28.5 bits (62), Expect(4) = 6e-31
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = -1

Query: 840 AWAKVFQPKDCGELGFKSMKEVNCVALDRTTCRFL 736
           +W  + +PK CG LGF+  +  N   L R   R +
Sbjct: 704 SWDCITKPKHCGGLGFRDFRLFNQALLARQAWRLI 738


>gb|EAZ20803.1| hypothetical protein OsJ_36426 [Oryza sativa Japonica Group]
          Length = 787

 Score = 63.5 bits (153), Expect(4) = 6e-31
 Identities = 58/225 (25%), Positives = 91/225 (40%), Gaps = 9/225 (4%)
 Frame = -2

Query: 1490 WNGGQLESFQPSRGIWK----RTFYLLICLSCVWRF*VIIFTRRWRQAVGRGYGYLGRPE 1323
            +NG  L +F PSRG+ +      F  L  +  +     ++   R  Q          R  
Sbjct: 483  FNGTLLSTFAPSRGLRQGDPLSPFLFLFVVDGL----SLLLEERVAQGALSPVHICRRAP 538

Query: 1322 LSDHLCFEDGFLLFGVGTEKQASVMESIVQEFCSSWAKVST*RDHNCSFRKMFNQSFLSD 1143
               +L F D  LLF   T +QA+V+ +++ ++  +W          CS   MF ++   D
Sbjct: 539  GISNLLFTDDTLLFFKATSEQANVVMNVLADY--AWCTGQLINQEKCSI--MFGEASPPD 594

Query: 1142 FL*-----LRYSSTHDFGLYLGIPLLHRRVGKGTYHYLVEKVRKKLSAWKGCNMSMASRA 978
                    L+  ST     YLG P    R+ KG +  L EK+ K++  W    +S   + 
Sbjct: 595  VQESVRSVLQVGSTSFDDKYLGFPTPEGRMNKGKFQSLQEKLCKRIMQWGENFLSSGGKE 654

Query: 977  LLIQYSMSTVANYAMGTTLVPAHTLQLLKKANHRFQWGDLLGSSK 843
            +LI+  +  +  Y MG   +P      L K    F WG   G  K
Sbjct: 655  ILIKAVLQAITVYVMGIFKLPDSICDELTKLTRNFWWGSEKGKRK 699



 Score = 62.4 bits (150), Expect(4) = 6e-31
 Identities = 33/96 (34%), Positives = 57/96 (59%), Gaps = 3/96 (3%)
 Frame = -3

Query: 1795 YEGHHQSIVNWLKPLMTKLTGDSKSSFVLGRQAADNIILAKEVIHTMRRKKQDLMAT--- 1625
            Y+   + +VN L+P++ +L   ++S+FV GR   DN ++A E  H++++ K+   AT   
Sbjct: 378  YKVVSKCLVNRLRPILDELISPNQSAFVPGRMITDNALIAFECFHSIQKNKKLSSATCAY 437

Query: 1624 NIDLEKAHDRVEWDLLKKIL*NEGINDDFVRLIMKC 1517
             +DL KA+DRV+W  L++ +   G    +V  IM C
Sbjct: 438  KLDLSKAYDRVDWKFLEQSMYKLGFAHCWVNWIMSC 473



 Score = 49.7 bits (117), Expect(4) = 6e-31
 Identities = 29/76 (38%), Positives = 44/76 (57%)
 Frame = -1

Query: 1998 GPVGFLPSFIKKNIGILLASLVQSLSNKLFEM*LFSEDLNATLITLILKKDFLELVSQFR 1819
            GP GF   F ++N G+L   +V+++  + F   +    +N T I LI K D    +  +R
Sbjct: 311  GPDGFPARFFQRNWGLLKEEVVKAVK-EFFNTGVMPAGVNETAIVLIPKVDQPIELRDYR 369

Query: 1818 PIALCNVLMKVITKVL 1771
            PI+LCNVL KV++K L
Sbjct: 370  PISLCNVLYKVVSKCL 385



 Score = 28.5 bits (62), Expect(4) = 6e-31
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = -1

Query: 840 AWAKVFQPKDCGELGFKSMKEVNCVALDRTTCRFL 736
           +W  + +PK CG LGF+  +  N   L R   R +
Sbjct: 704 SWDCITKPKHCGGLGFRDFRLFNQALLARQAWRLI 738


>gb|ABA96650.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1100

 Score = 65.5 bits (158), Expect(4) = 2e-30
 Identities = 29/95 (30%), Positives = 56/95 (58%), Gaps = 3/95 (3%)
 Frame = -3

Query: 1774 IVNWLKPLMTKLTGDSKSSFVLGRQAADNIILAKEVIHTM---RRKKQDLMATNIDLEKA 1604
            +VN L+P++  +    +S+F+ GR   DN ++A E  H +   +R+ Q+  A  +DL KA
Sbjct: 638  LVNHLRPILESIISQEQSAFIPGRMITDNALIAFECFHNIAQSKRESQEFCAYKLDLAKA 697

Query: 1603 HDRVEWDLLKKIL*NEGINDDFVRLIMKCTLKLLF 1499
            +DRV+W  L+ +L   G ++ +++ +M C   + +
Sbjct: 698  YDRVDWQYLEGVLDRMGFSNTWIQWMMACVTSVRY 732



 Score = 55.8 bits (133), Expect(4) = 2e-30
 Identities = 64/254 (25%), Positives = 108/254 (42%), Gaps = 20/254 (7%)
 Frame = -2

Query: 1490 WNGGQLESFQPSRGIWK---RTFYLLI--------CLSCVWRF*VIIFTRRWRQAVGRGY 1344
            +NG  L+SFQPSRG+ +    + YL +         LS   R   ++  +  RQA G   
Sbjct: 736  FNGSMLKSFQPSRGLRQGDPLSPYLFLFVADGLSTILSSAVRTGDLVPLKVCRQAPG--- 792

Query: 1343 GYLGRPELSDHLCFEDGFLLFGVGTEKQASVMESIVQ--EFCSSW----AKVST*RDHNC 1182
                      HL F D  LLF     +QA+V++  +   E C+S     AK S     +C
Sbjct: 793  --------ISHLLFADDSLLFFKANVEQATVVKEALNLYERCTSQLLSPAKCSMLFGKHC 844

Query: 1181 SFRKMFNQSFLSDFL*LRYSSTHDFGLYLGIPLLHRRVGKGTYHYLVEKVRKKLSAWKGC 1002
            S +    Q  +   L ++ +S  D   YLG+P    R+    +  + E+  K+L  W   
Sbjct: 845  SDQ---TQPGIKSLLDVQQNSFED--KYLGLPTPEGRMKADRFQSIKERFFKRLIDWAEK 899

Query: 1001 NMSMASRALLIQYSMSTVANYAMGTTLVPAHTLQLLKKANHRFQWGDLLGSSKL---LGQ 831
            ++ M  + +LI+  +  +  Y M    +P    +   +   +F WG+     K+     Q
Sbjct: 900  HLPMGGKEVLIKSVIQALPTYMMSVFKLPPSFCEEYMQLVRKFWWGEDRSQRKVHWASWQ 959

Query: 830  RYFNPRTVENWGLK 789
            +   P+++   G K
Sbjct: 960  QLIKPKSMGGMGFK 973



 Score = 49.7 bits (117), Expect(4) = 2e-30
 Identities = 28/76 (36%), Positives = 43/76 (56%)
 Frame = -1

Query: 1998 GPVGFLPSFIKKNIGILLASLVQSLSNKLFEM*LFSEDLNATLITLILKKDFLELVSQFR 1819
            GP GF   F ++N  +L   + +++    F+  +  E +N T I LI KK   + +  FR
Sbjct: 564  GPDGFPARFFQRNWEVLKNDVCKAVK-LFFDQKVMPEGVNTTAIVLIPKKKESKELKDFR 622

Query: 1818 PIALCNVLMKVITKVL 1771
            PI+LCNV+ KV+ K L
Sbjct: 623  PISLCNVIYKVVAKCL 638



 Score = 31.2 bits (69), Expect(4) = 2e-30
 Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
 Frame = -3

Query: 727  DQLWARVLYAK*---GDIRERDPGKTVRAASYTLHNPLEGY*FLTQGLDWVAGDGNFIQF 557
            D L ARVL AK    GD+ +         +S +    + G   L +G+ W  G G  +  
Sbjct: 995  DSLCARVLKAKYYPNGDLLDTAFSSV---SSDSWKGIVHGLELLKKGVIWRIGTGRKVHI 1051

Query: 556  WMDDWL 539
            W DDWL
Sbjct: 1052 WRDDWL 1057


>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1357

 Score = 78.6 bits (192), Expect(4) = 8e-30
 Identities = 78/314 (24%), Positives = 141/314 (44%), Gaps = 17/314 (5%)
 Frame = -3

Query: 2275 AFFHASALLKQKKRNISMLRDSENRWIHDQKKMQTLVRNFFSKLYTLEACITCDTEFGTF 2096
            ++FH  A  ++K+  I  + D   RW  + ++++ +V  +F +++T     + +     F
Sbjct: 358  SYFHHKASQRKKRNLIHGIFDGGGRWQTEGEEIECVVERYFQEIFT-----SSEPSSNDF 412

Query: 2095 HLFLFWTSGGLTMGCWIMKLGRQYSKWVQIKLWASW----------FSS*FYKKKYWDII 1946
               L      +T     + L + YSK       +              + FY++ +W II
Sbjct: 413  QEVLQHVKRSVTQEYNDILL-KPYSKEEIFAALSDMHPCKAPGPDGMHAIFYQR-FWHII 470

Query: 1945 GLSCTKFIQQAFRDVTFFRGS*CYLDYFNTEEGFPGV--GFTV*TYCTVQCPYEGHHQSI 1772
            G     F+     + +      C       +   P V   F   + C V   Y+   ++I
Sbjct: 471  GDEVFNFVSSILHNYSCPGNVNCTNIALIPKVKSPTVVSEFRPISLCNVL--YKIASKAI 528

Query: 1771 VNWLKPLMTKLTGDSKSSFVLGRQAADNIILAKEVIHTMRRK---KQDLMATNIDLEKAH 1601
            V  LK  +  +  +++S+FV GR  +DN ++A E+ HTM+++   ++ LMA  +D+ KA+
Sbjct: 529  VLRLKRFLPCIATENQSAFVPGRLISDNSLIALEIFHTMKKRNNSRKGLMAMKLDMSKAY 588

Query: 1600 DRVEWDLLKKIL*NEGINDDFVRLIMKC--TLKLLF*LFGMVASLKVSNHQEVYGRGPSI 1427
            DRVEW  L+K+L   G +  +V L+M C  T+   F + G V      +     G   S 
Sbjct: 589  DRVEWGFLRKLLLTMGFDGRWVNLVMSCVATVSYSFIINGRVCGSVTPSRGLRQGDPLSP 648

Query: 1426 YLFVCLVFGGFESL 1385
            +LF+ LV   F  +
Sbjct: 649  FLFI-LVADAFSQM 661



 Score = 60.8 bits (146), Expect(4) = 8e-30
 Identities = 46/158 (29%), Positives = 74/158 (46%), Gaps = 3/158 (1%)
 Frame = -2

Query: 1328 PELSDHLCFEDGFLLFGVGTEKQASVMESIVQEFCSSWAKVST*RDHNCSFRKMFN---Q 1158
            PE+S HL F D  LLF   T ++   +  I+ ++ ++  +         SF +  +   +
Sbjct: 681  PEIS-HLLFADDSLLFTRATRQECLTIVDILNKYEAASGQKINYEKSEVSFSRGVSCEKK 739

Query: 1157 SFLSDFL*LRYSSTHDFGLYLGIPLLHRRVGKGTYHYLVEKVRKKLSAWKGCNMSMASRA 978
              L   L +R    H    YLGIP L  R  K  +  L++++ KKL  WK   +S A + 
Sbjct: 740  EELITLLHMRQVDRHQ--KYLGIPALCGRSKKVLFRELLDRMWKKLRGWKEKLLSRAGKE 797

Query: 977  LLIQYSMSTVANYAMGTTLVPAHTLQLLKKANHRFQWG 864
            +LI+  +  +  Y MG   +P   +Q +  A  RF WG
Sbjct: 798  VLIKAVIQALPTYLMGVYKLPVAVIQEIHSAMARFWWG 835



 Score = 33.1 bits (74), Expect(4) = 8e-30
 Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
 Frame = -3

Query: 733  NRDQLWARVLYAK*---GDIRERDPGKTVRAASYTLHNPLEGY*FLTQGLDWVAGDGNFI 563
            N++ L +RV+ AK    GD+R    G +    SY+  +       + +GL W  GDG  I
Sbjct: 883  NKESLLSRVMSAKYYPHGDVRYARLGYS---HSYSWRSIWGAKSLVLEGLIWRVGDGTKI 939

Query: 562  QFWMDDWLGN 533
              W   W+G+
Sbjct: 940  DIWSAPWVGD 949



 Score = 27.7 bits (60), Expect(4) = 8e-30
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = -1

Query: 843 IAWAKVFQPKDCGELGFKSMKEVNCVALDRTTCRFL 736
           ++W K+ +PK  G +GFK +   N   L +   R L
Sbjct: 846 LSWEKMCKPKCMGGMGFKDLAVFNDALLGKQVWRLL 881


>gb|EMJ27906.1| hypothetical protein PRUPE_ppa020120mg [Prunus persica]
          Length = 1011

 Score = 70.9 bits (172), Expect(5) = 1e-28
 Identities = 33/89 (37%), Positives = 57/89 (64%), Gaps = 3/89 (3%)
 Frame = -3

Query: 1774 IVNWLKPLMTKLTGDSKSSFVLGRQAADNIILAKEVIHTMRRK---KQDLMATNIDLEKA 1604
            + N LK ++ K+   S+S+F+ GR  +DN ILA E+IH +RR+   K+  M   +D+ KA
Sbjct: 424  LANRLKLILHKIISPSQSAFISGRLISDNTILAAEIIHYLRRRRRGKKGFMVLKMDMSKA 483

Query: 1603 HDRVEWDLLKKIL*NEGINDDFVRLIMKC 1517
            +DR+EW  L+ I+   G  + +++L++ C
Sbjct: 484  YDRIEWSFLEAIMRKLGFAEQWIQLMLTC 512



 Score = 53.1 bits (126), Expect(5) = 1e-28
 Identities = 55/232 (23%), Positives = 99/232 (42%), Gaps = 7/232 (3%)
 Frame = -2

Query: 1514 SQASLLIIWNGGQLESFQPSRGIWK----RTFYLLICLSCVWRF*VIIFTRRWRQAVGRG 1347
            S  S   + NG       PSRG+ +      +  L+C   +      +  ++ R+   +G
Sbjct: 514  STVSYSFVINGTPHGFLHPSRGLHQGDPLSPYLFLLCAEGLTE----LIAQKEREGFLKG 569

Query: 1346 YGYL-GRPELSDHLCFEDGFLLFGVGTEKQASVMESIVQEFCSSWAKVST*RDHNCSFRK 1170
                 G P +S HL F D  +LF       A  M +  Q+       V+  +   C  + 
Sbjct: 570  VSICRGAPAIS-HLFFADDSVLFA--RANMADCMRASGQQ-------VNFQKSAVCFSKN 619

Query: 1169 MF--NQSFLSDFL*LRYSSTHDFGLYLGIPLLHRRVGKGTYHYLVEKVRKKLSAWKGCNM 996
            +   +Q  L+ F+ +     H    YLG+P++  +    ++++L E++ KKL  WKG  +
Sbjct: 620  VHRGDQLMLAQFMGIPCVDHHS--QYLGLPMVLDKKKGASFNHLKERLWKKLQTWKGKLL 677

Query: 995  SMASRALLIQYSMSTVANYAMGTTLVPAHTLQLLKKANHRFQWGDLLGSSKL 840
            S A + +LI+     +  Y M   L+P +  + L K   +F W     + K+
Sbjct: 678  SGAGKEILIKVVAQAIPIYTMSYFLLPKYVCEDLNKLVAQFWWNSSTENKKI 729



 Score = 35.0 bits (79), Expect(5) = 1e-28
 Identities = 15/21 (71%), Positives = 18/21 (85%)
 Frame = -1

Query: 1833 VSQFRPIALCNVLMKVITKVL 1771
            +SQ RPI+LCNVL K+ TKVL
Sbjct: 404  MSQLRPISLCNVLFKIATKVL 424



 Score = 29.3 bits (64), Expect(5) = 1e-28
 Identities = 21/65 (32%), Positives = 25/65 (38%)
 Frame = -3

Query: 733 NRDQLWARVLYAK*GDIRERDPGKTVRAASYTLHNPLEGY*FLTQGLDWVAGDGNFIQFW 554
           N D L  +VL AK    R          AS    +  E    + QG  W  G G+ I  W
Sbjct: 769 NPDSLITKVLKAKYFPTRSFLETAVSLHASVVWKSLYEARTVIIQGSRWQVGSGDTIGIW 828

Query: 553 MDDWL 539
            D WL
Sbjct: 829 EDRWL 833



 Score = 26.9 bits (58), Expect(5) = 1e-28
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -1

Query: 843 IAWAKVFQPKDCGELGFKSMKEVNCVALDRTTCRFL 736
           +AW ++  PK+ G LGF+++   N   L +   R L
Sbjct: 732 MAWDRLCAPKEEGGLGFRNLHAFNLALLAKQGWRLL 767


>gb|AAC26674.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 970

 Score = 73.2 bits (178), Expect(3) = 4e-28
 Identities = 36/86 (41%), Positives = 59/86 (68%), Gaps = 2/86 (2%)
 Frame = -3

Query: 1774 IVNWLKPLMTKLTGDSKSSFVLGRQAADNIILAKEVIHTMRRKK--QDLMATNIDLEKAH 1601
            IVN LK ++ KL G ++++F+ GR + DNI+L +E +H+MRRKK  +  M   +DLEKA+
Sbjct: 235  IVNRLKKVILKLIGPAQANFIPGRLSIDNIVLVQEAVHSMRRKKGRKGWMLLKLDLEKAY 294

Query: 1600 DRVEWDLLKKIL*NEGINDDFVRLIM 1523
            DR+ W+ L++ L   G+++ +   IM
Sbjct: 295  DRIRWNFLQETLVATGLSEVWTHRIM 320



 Score = 60.1 bits (144), Expect(3) = 4e-28
 Identities = 55/244 (22%), Positives = 100/244 (40%), Gaps = 13/244 (5%)
 Frame = -2

Query: 1505 SLLIIWNGGQLESFQPSRGIWK----RTFYLLICLSCVWR-F*VIIFTRRWRQAVGRGYG 1341
            S+ ++WNGG+ +SF P+RG+ +      +  ++CL  +       + T  W+        
Sbjct: 327  SMSVLWNGGKTDSFVPARGLRQGDPLSPYLFVLCLERLCHLIEASVGTWDWKP------- 379

Query: 1340 YLGRPELSDHLCFEDGFLLFGVGTEKQASVMESIVQEFCSSWAKVST*RDHNCSFRK--- 1170
                              L    +  Q  ++  ++++FC +          N S  K   
Sbjct: 380  ----------------MALSCEASVAQILIIRRVLEQFCEA-------SGQNVSLEKSKI 416

Query: 1169 MFNQSFLSDFL*L-----RYSSTHDFGLYLGIPLLHRRVGKGTYHYLVEKVRKKLSAWKG 1005
            +F+ +   D   L         T + G YLG+P+L +R+ K T   ++E V   L+ WK 
Sbjct: 417  VFSNNVSRDMERLISGESGIGCTRELGKYLGMPILQKRMNKETSGEVLEHVSSSLAGWKS 476

Query: 1004 CNMSMASRALLIQYSMSTVANYAMGTTLVPAHTLQLLKKANHRFQWGDLLGSSKLLGQRY 825
             ++S+A R  L +  +ST+  + M   ++P  TL  L        W  LL   + L  R 
Sbjct: 477  RSLSLAWRITLTKAVLSTIPVHVMSAIILPVATLDSL-------DWWRLLHDKETLWARV 529

Query: 824  FNPR 813
             + +
Sbjct: 530  LSKK 533



 Score = 41.6 bits (96), Expect(3) = 4e-28
 Identities = 19/37 (51%), Positives = 27/37 (72%)
 Frame = -1

Query: 1881 NATLITLILKKDFLELVSQFRPIALCNVLMKVITKVL 1771
            N  L+ LI K    E ++QFRP++LCNVL K+ITK++
Sbjct: 199  NDALLVLIAKVAKPERITQFRPMSLCNVLFKIITKMI 235


>gb|EEE52912.1| hypothetical protein OsJ_35521 [Oryza sativa Japonica Group]
          Length = 1003

 Score = 65.5 bits (158), Expect(4) = 8e-28
 Identities = 29/95 (30%), Positives = 56/95 (58%), Gaps = 3/95 (3%)
 Frame = -3

Query: 1774 IVNWLKPLMTKLTGDSKSSFVLGRQAADNIILAKEVIHTM---RRKKQDLMATNIDLEKA 1604
            +VN L+P++  +    +S+F+ GR   DN ++A E  H +   +R+ Q+  A  +DL KA
Sbjct: 541  LVNHLRPILESIISQEQSAFIPGRMITDNALIAFECFHNIAQSKRESQEFCAYKLDLAKA 600

Query: 1603 HDRVEWDLLKKIL*NEGINDDFVRLIMKCTLKLLF 1499
            +DRV+W  L+ +L   G ++ +++ +M C   + +
Sbjct: 601  YDRVDWQYLEGVLDRMGFSNTWIQWMMACVTSVRY 635



 Score = 55.8 bits (133), Expect(4) = 8e-28
 Identities = 64/254 (25%), Positives = 108/254 (42%), Gaps = 20/254 (7%)
 Frame = -2

Query: 1490 WNGGQLESFQPSRGIWK---RTFYLLI--------CLSCVWRF*VIIFTRRWRQAVGRGY 1344
            +NG  L+SFQPSRG+ +    + YL +         LS   R   ++  +  RQA G   
Sbjct: 639  FNGSMLKSFQPSRGLRQGDPLSPYLFLFVADGLSTILSSAVRTGDLVPLKVCRQAPG--- 695

Query: 1343 GYLGRPELSDHLCFEDGFLLFGVGTEKQASVMESIVQ--EFCSSW----AKVST*RDHNC 1182
                      HL F D  LLF     +QA+V++  +   E C+S     AK S     +C
Sbjct: 696  --------ISHLLFADDSLLFFKANVEQATVVKEALNLYERCTSQLLSPAKCSMLFGKHC 747

Query: 1181 SFRKMFNQSFLSDFL*LRYSSTHDFGLYLGIPLLHRRVGKGTYHYLVEKVRKKLSAWKGC 1002
            S +    Q  +   L ++ +S  D   YLG+P    R+    +  + E+  K+L  W   
Sbjct: 748  SDQ---TQPGIKSLLDVQQNSFED--KYLGLPTPEGRMKADRFQSIKERFFKRLIDWAEK 802

Query: 1001 NMSMASRALLIQYSMSTVANYAMGTTLVPAHTLQLLKKANHRFQWGDLLGSSKL---LGQ 831
            ++ M  + +LI+  +  +  Y M    +P    +   +   +F WG+     K+     Q
Sbjct: 803  HLPMGGKEVLIKSVIQALPTYMMSVFKLPPSFCEEYMQLVRKFWWGEDRSQRKVHWASWQ 862

Query: 830  RYFNPRTVENWGLK 789
            +   P+++   G K
Sbjct: 863  QLIKPKSMGGMGFK 876



 Score = 40.8 bits (94), Expect(4) = 8e-28
 Identities = 20/40 (50%), Positives = 26/40 (65%)
 Frame = -1

Query: 1890 EDLNATLITLILKKDFLELVSQFRPIALCNVLMKVITKVL 1771
            E +N T I LI KK   + +  FRPI+LCNV+ KV+ K L
Sbjct: 502  EGVNTTAIVLIPKKKESKELKDFRPISLCNVIYKVVAKCL 541



 Score = 31.2 bits (69), Expect(4) = 8e-28
 Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
 Frame = -3

Query: 727  DQLWARVLYAK*---GDIRERDPGKTVRAASYTLHNPLEGY*FLTQGLDWVAGDGNFIQF 557
            D L ARVL AK    GD+ +         +S +    + G   L +G+ W  G G  +  
Sbjct: 898  DSLCARVLKAKYYPNGDLLDTAFSSV---SSDSWKGIVHGLELLKKGVIWRIGTGRKVHI 954

Query: 556  WMDDWL 539
            W DDWL
Sbjct: 955  WRDDWL 960


>gb|EEE50691.1| hypothetical protein OsJ_30951 [Oryza sativa Japonica Group]
          Length = 697

 Score = 64.3 bits (155), Expect(6) = 3e-27
 Identities = 33/89 (37%), Positives = 53/89 (59%), Gaps = 3/89 (3%)
 Frame = -3

Query: 1774 IVNWLKPLMTKLTGDSKSSFVLGRQAADNIILAKEVIHTMRRK---KQDLMATNIDLEKA 1604
            + N LK ++ ++  D++S+FV GR   DN+++A E  H ++ K   K    A  +D+ KA
Sbjct: 42   LANRLKSILPEIILDTQSAFVPGRLITDNVLIAYEATHFLQNKRNGKDGYAAIKLDMSKA 101

Query: 1603 HDRVEWDLLKKIL*NEGINDDFVRLIMKC 1517
            +DRVEW  L  +L   G ++ + RLIM C
Sbjct: 102  YDRVEWPFLLHMLRRLGFDEKWNRLIMNC 130



 Score = 45.8 bits (107), Expect(6) = 3e-27
 Identities = 41/164 (25%), Positives = 65/164 (39%), Gaps = 8/164 (4%)
 Frame = -2

Query: 1334 GRPELSDHLCFEDGFLLFGVGTEKQASVMESIVQEFCSSWAKVST*RDHNCSFRKMFNQS 1155
            G P L+ HL F D  LL    TE  A+ M+ I+ ++     ++         F    ++ 
Sbjct: 193  GAPILT-HLFFADDSLLLLKATESVANEMKQIILDYERCSGQIVNRDKSVVMFSSNMDEE 251

Query: 1154 FLSDFL*LRYSSTHDFGL--------YLGIPLLHRRVGKGTYHYLVEKVRKKLSAWKGCN 999
                F       +H  G+        YLG+P+   R    T+ YL EK+ + +  WK   
Sbjct: 252  EKKVF-------SHTLGINCIAHNDRYLGLPVFIGRSKAKTFEYLKEKIWRCIQGWKEKF 304

Query: 998  MSMASRALLIQYSMSTVANYAMGTTLVPAHTLQLLKKANHRFQW 867
            +S A + +LI+     +  YAM    +       L     RF W
Sbjct: 305  LSKAGKEILIKAVAQAIPTYAMSCFYLTKSLCDELTSMILRFWW 348



 Score = 36.6 bits (83), Expect(6) = 3e-27
 Identities = 21/65 (32%), Positives = 32/65 (49%)
 Frame = -3

Query: 733 NRDQLWARVLYAK*GDIRERDPGKTVRAASYTLHNPLEGY*FLTQGLDWVAGDGNFIQFW 554
           N D L +R+L AK          ++ +  SY+  + L+G   L +G+ W  G+G  I  W
Sbjct: 397 NPDSLCSRLLKAKYFPNCNVLDAQSRKQMSYSWRSILKGIQLLRKGVIWRVGNGEHINIW 456

Query: 553 MDDWL 539
            D WL
Sbjct: 457 SDPWL 461



 Score = 33.9 bits (76), Expect(6) = 3e-27
 Identities = 17/37 (45%), Positives = 24/37 (64%)
 Frame = -1

Query: 1881 NATLITLILKKDFLELVSQFRPIALCNVLMKVITKVL 1771
            N T I LI K     ++ + RP +LCNV+ K+I+KVL
Sbjct: 6    NDTNIVLIPKVKSPSVLKELRPSSLCNVVYKIISKVL 42



 Score = 25.0 bits (53), Expect(6) = 3e-27
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -1

Query: 831 KVFQPKDCGELGFKSMKEVNCVALDRTTCRFL 736
           K+ +PK  G LGF+ +   N   L R   R +
Sbjct: 364 KIMKPKSQGGLGFRDLHSFNIAMLARQGWRLI 395



 Score = 24.3 bits (51), Expect(6) = 3e-27
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = -1

Query: 1437 DLLSTYLFVLCLEVLSHYIHS 1375
            D LS YLFV+C E  S  I +
Sbjct: 158  DPLSPYLFVICAEAFSAAIQA 178


>emb|CAN77005.1| hypothetical protein VITISV_027306 [Vitis vinifera]
          Length = 549

 Score = 53.5 bits (127), Expect(5) = 7e-27
 Identities = 22/86 (25%), Positives = 48/86 (55%)
 Frame = -3

Query: 1774 IVNWLKPLMTKLTGDSKSSFVLGRQAADNIILAKEVIHTMRRKKQDLMATNIDLEKAHDR 1595
            + N LK ++ K+    +++F+ GRQ  D  ++A EVI + +++ +  +   +D++KA+D 
Sbjct: 84   LTNRLKKIIGKVISPDQNAFIKGRQILDGSLIANEVIDSWQKRGEKGLICKLDIKKAYDS 143

Query: 1594 VEWDLLKKIL*NEGINDDFVRLIMKC 1517
            + W  L K++   G    ++  +  C
Sbjct: 144  INWQFLLKVMQKMGFGSKWIGWMWSC 169



 Score = 47.8 bits (112), Expect(5) = 7e-27
 Identities = 26/86 (30%), Positives = 42/86 (48%)
 Frame = -2

Query: 1100 YLGIPLLHRRVGKGTYHYLVEKVRKKLSAWKGCNMSMASRALLIQYSMSTVANYAMGTTL 921
            YLG+PL         +  + EK+R+KL+ WK   +S   R  LI+ ++ ++  Y M    
Sbjct: 311  YLGLPLGAPNRASSVWDGVEEKLRRKLALWKRQFLSKGGRITLIKSTLVSIPLYQMSLFR 370

Query: 920  VPAHTLQLLKKANHRFQWGDLLGSSK 843
            +P    + L+K    F WG   G +K
Sbjct: 371  MPKLVARRLEKLQRNFLWGGANGGNK 396



 Score = 38.1 bits (87), Expect(5) = 7e-27
 Identities = 26/76 (34%), Positives = 38/76 (50%)
 Frame = -1

Query: 1998 GPVGFLPSFIKKNIGILLASLVQSLSNKLFEM*LFSEDLNATLITLILKKDFLELVSQFR 1819
            GP GF   F + N   ++   V  +  + +E   F   LN T + LI KK   E +  +R
Sbjct: 10   GPDGFTVVFWQ-NCWEIVKEDVLDMFKEFYEQNSFIRSLNHTFLVLIPKKGGAEDLDDYR 68

Query: 1818 PIALCNVLMKVITKVL 1771
            PI+L   L K++ KVL
Sbjct: 69   PISLLGGLYKLLAKVL 84



 Score = 35.0 bits (79), Expect(5) = 7e-27
 Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
 Frame = -1

Query: 1467 FPTIKRYMEEDLLSTYLFVLCLEVLSHYIHSEMETGCWKG--VWLSREARTL*SFML*RW 1294
            FP+ K   +ED LS Y FV+ +EVLS  I   +E G   G  +W  R      S +L   
Sbjct: 187  FPSSKGLRQEDPLSPYFFVMGMEVLSALITRAIEGGFIYGCRIWKGRGKAVNISHLLFAD 246

Query: 1293 FPAIWCWH*ETSLGHGIYRSGVL*FL----GQSVNIERSQL 1183
               ++C   + SL   +Y S +L +     G  +N+++S +
Sbjct: 247  DTIVFCEAKKESL---LYLSWILFWFEAASGLKINLDKSMV 284



 Score = 35.0 bits (79), Expect(5) = 7e-27
 Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 5/107 (4%)
 Frame = -3

Query: 742 FSFNRDQLWARVLYAK*GDIRERDPGKTVRAASYTL-----HNPLEGY*FLTQGLDWVAG 578
           F+  +++LW +VL AK G   + + G   R A+           L+   +  + + +  G
Sbjct: 434 FARAKEELWKKVLKAKYG---QEEFGWRTRKANGVFGVGVWKEILKESAWCWENMVFKVG 490

Query: 577 DGNFIQFWMDDWLGNGKLVDLCPVLLPAEDLKKSLASHISLHLPWDQ 437
            GN I+FW+D W GN  L    P L        +   ++++   WDQ
Sbjct: 491 KGNKIRFWIDPWCGNNVLSQGFPDL-----FSMAAQRNVTMEDYWDQ 532


>gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse transcriptase [Oryza sativa
            Japonica Group]
          Length = 1382

 Score = 65.9 bits (159), Expect(6) = 1e-26
 Identities = 32/88 (36%), Positives = 52/88 (59%), Gaps = 2/88 (2%)
 Frame = -3

Query: 1774 IVNWLKPLMTKLTGDSKSSFVLGRQAADNIILAKEVIHTMRRK--KQDLMATNIDLEKAH 1601
            + N LKP +  +  + +S+FV GR   D+ ++A E +HT+R++  K    A  ID+ KA+
Sbjct: 537  LANRLKPFLPDIVSEFQSAFVPGRLITDSALVAYECLHTIRKQHNKNPFFALKIDMMKAY 596

Query: 1600 DRVEWDLLKKIL*NEGINDDFVRLIMKC 1517
            DRVEW  L   L   G + D++  +M+C
Sbjct: 597  DRVEWAYLSGCLSKLGFSQDWINTVMRC 624



 Score = 42.4 bits (98), Expect(6) = 1e-26
 Identities = 28/76 (36%), Positives = 43/76 (56%)
 Frame = -1

Query: 1998 GPVGFLPSFIKKNIGILLASLVQSLSNKLFEM*LFSEDLNATLITLILKKDFLELVSQFR 1819
            GP GF   F + + GIL   +  ++   L    +  E L  +++ LI K +    +S+FR
Sbjct: 463  GPDGFPALFYQTHWGILEEHICNAVRGFLLGEEI-PEGLCDSVVVLIPKVNNASHLSKFR 521

Query: 1818 PIALCNVLMKVITKVL 1771
            PI+LCNVL K+ +KVL
Sbjct: 522  PISLCNVLYKIASKVL 537



 Score = 40.0 bits (92), Expect(6) = 1e-26
 Identities = 48/227 (21%), Positives = 88/227 (38%), Gaps = 11/227 (4%)
 Frame = -2

Query: 1487 NGGQLESFQPSRGIWK----RTFYLLIC---LSCVWRF*VIIFTRRWRQAVGRGYGYL-G 1332
            NG   +   PSRGI +      +  L+C   LSC+            ++  G   G   G
Sbjct: 635  NGELTKPVVPSRGIRQGDPISPYLFLLCTEGLSCLLHK---------KEVAGELQGIKNG 685

Query: 1331 R--PELSDHLCFEDGFLLFGVGTEKQASVMESIVQEFCSSWAKVST*RDHNCSFRKMFNQ 1158
            R  P +S HL F D  + F     +    +++ ++ +CS+  +       +  F K    
Sbjct: 686  RHGPPIS-HLLFADDSIFFAKADSRNVQALKNTLRSYCSASGQKINLHKSSIFFGKRCPD 744

Query: 1157 SF-LSDFL*LRYSSTHDFGLYLGIPLLHRRVGKGTYHYLVEKVRKKLSAWKGCNMSMASR 981
            +  +S    L+  +      YLG+P          + +L E++ K+++ W    +S A  
Sbjct: 745  AVKISVKSCLQVDNEVLQDSYLGMPTEIGLATTNFFKFLPERIWKRVNGWTDRPLSRAGM 804

Query: 980  ALLIQYSMSTVANYAMGTTLVPAHTLQLLKKANHRFQWGDLLGSSKL 840
              +++     + NY M    +P    + +K       WG   G  K+
Sbjct: 805  ETMLKAVAQAIPNYVMSCFRIPVSICEKMKTCIADHWWGFEDGKKKM 851



 Score = 31.6 bits (70), Expect(6) = 1e-26
 Identities = 13/39 (33%), Positives = 23/39 (58%)
 Frame = -3

Query: 655  RAASYTLHNPLEGY*FLTQGLDWVAGDGNFIQFWMDDWL 539
            ++ S+T  + L G   L +G+ W  GDG  I+ + D+W+
Sbjct: 917  KSPSFTWRSLLFGRELLAKGVRWGVGDGKTIKIFSDNWI 955



 Score = 25.0 bits (53), Expect(6) = 1e-26
 Identities = 35/123 (28%), Positives = 52/123 (42%), Gaps = 10/123 (8%)
 Frame = -2

Query: 2339 EEHLWFQKSRSKWFVEGD*TTCFFSCIGLAQ--TEKAKYFYVEGFRESMDS*PKEDANFG 2166
            EE +  Q+SR  W  EGD  T FF     A+  T + K    +     +    +E     
Sbjct: 348  EEIMARQRSRVDWLREGDRNTAFFHARASARRRTNRIKELVRDDGSRCIS---QEGIKRM 404

Query: 2165 KELF**ALYFRS--------LYYV*HRVWNFPSLSLLDKWWLNHGVLDHEIREAIFQMGS 2010
             E+F   L+           L  + ++V +F +   L K + N      EI+ A+FQMGS
Sbjct: 405  AEVFYENLFSSEPCDSMEEVLDAIPNKVGDFIN-GELGKQYTNE-----EIKTALFQMGS 458

Query: 2009 NKA 2001
             KA
Sbjct: 459  TKA 461



 Score = 23.1 bits (48), Expect(6) = 1e-26
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = -1

Query: 840 AWAKVFQPKDCGELGFKSMKEVNCVALDRTTCRFL 736
           +W+ +  PK  G +GF+     N   L R   R L
Sbjct: 855 SWSWLSTPKFLGGMGFREFTTFNQAMLGRQCWRLL 889


>gb|AAP54617.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group] gi|125575397|gb|EAZ16681.1| hypothetical
            protein OsJ_32156 [Oryza sativa Japonica Group]
          Length = 1339

 Score = 65.9 bits (159), Expect(6) = 1e-26
 Identities = 32/88 (36%), Positives = 52/88 (59%), Gaps = 2/88 (2%)
 Frame = -3

Query: 1774 IVNWLKPLMTKLTGDSKSSFVLGRQAADNIILAKEVIHTMRRK--KQDLMATNIDLEKAH 1601
            + N LKP +  +  + +S+FV GR   D+ ++A E +HT+R++  K    A  ID+ KA+
Sbjct: 494  LANRLKPFLPDIVSEFQSAFVPGRLITDSALVAYECLHTIRKQHNKNPFFALKIDMMKAY 553

Query: 1600 DRVEWDLLKKIL*NEGINDDFVRLIMKC 1517
            DRVEW  L   L   G + D++  +M+C
Sbjct: 554  DRVEWAYLSGCLSKLGFSQDWINTVMRC 581



 Score = 42.4 bits (98), Expect(6) = 1e-26
 Identities = 28/76 (36%), Positives = 43/76 (56%)
 Frame = -1

Query: 1998 GPVGFLPSFIKKNIGILLASLVQSLSNKLFEM*LFSEDLNATLITLILKKDFLELVSQFR 1819
            GP GF   F + + GIL   +  ++   L    +  E L  +++ LI K +    +S+FR
Sbjct: 420  GPDGFPALFYQTHWGILEEHICNAVRGFLLGEEI-PEGLCDSVVVLIPKVNNASHLSKFR 478

Query: 1818 PIALCNVLMKVITKVL 1771
            PI+LCNVL K+ +KVL
Sbjct: 479  PISLCNVLYKIASKVL 494



 Score = 40.0 bits (92), Expect(6) = 1e-26
 Identities = 48/227 (21%), Positives = 88/227 (38%), Gaps = 11/227 (4%)
 Frame = -2

Query: 1487 NGGQLESFQPSRGIWK----RTFYLLIC---LSCVWRF*VIIFTRRWRQAVGRGYGYL-G 1332
            NG   +   PSRGI +      +  L+C   LSC+            ++  G   G   G
Sbjct: 592  NGELTKPVVPSRGIRQGDPISPYLFLLCTEGLSCLLHK---------KEVAGELQGIKNG 642

Query: 1331 R--PELSDHLCFEDGFLLFGVGTEKQASVMESIVQEFCSSWAKVST*RDHNCSFRKMFNQ 1158
            R  P +S HL F D  + F     +    +++ ++ +CS+  +       +  F K    
Sbjct: 643  RHGPPIS-HLLFADDSIFFAKADSRNVQALKNTLRSYCSASGQKINLHKSSIFFGKRCPD 701

Query: 1157 SF-LSDFL*LRYSSTHDFGLYLGIPLLHRRVGKGTYHYLVEKVRKKLSAWKGCNMSMASR 981
            +  +S    L+  +      YLG+P          + +L E++ K+++ W    +S A  
Sbjct: 702  AVKISVKSCLQVDNEVLQDSYLGMPTEIGLATTNFFKFLPERIWKRVNGWTDRPLSRAGM 761

Query: 980  ALLIQYSMSTVANYAMGTTLVPAHTLQLLKKANHRFQWGDLLGSSKL 840
              +++     + NY M    +P    + +K       WG   G  K+
Sbjct: 762  ETMLKAVAQAIPNYVMSCFRIPVSICEKMKTCIADHWWGFEDGKKKM 808



 Score = 31.6 bits (70), Expect(6) = 1e-26
 Identities = 13/39 (33%), Positives = 23/39 (58%)
 Frame = -3

Query: 655 RAASYTLHNPLEGY*FLTQGLDWVAGDGNFIQFWMDDWL 539
           ++ S+T  + L G   L +G+ W  GDG  I+ + D+W+
Sbjct: 874 KSPSFTWRSLLFGRELLAKGVRWGVGDGKTIKIFSDNWI 912



 Score = 25.0 bits (53), Expect(6) = 1e-26
 Identities = 35/123 (28%), Positives = 52/123 (42%), Gaps = 10/123 (8%)
 Frame = -2

Query: 2339 EEHLWFQKSRSKWFVEGD*TTCFFSCIGLAQ--TEKAKYFYVEGFRESMDS*PKEDANFG 2166
            EE +  Q+SR  W  EGD  T FF     A+  T + K    +     +    +E     
Sbjct: 305  EEIMARQRSRVDWLREGDRNTAFFHARASARRRTNRIKELVRDDGSRCIS---QEGIKRM 361

Query: 2165 KELF**ALYFRS--------LYYV*HRVWNFPSLSLLDKWWLNHGVLDHEIREAIFQMGS 2010
             E+F   L+           L  + ++V +F +   L K + N      EI+ A+FQMGS
Sbjct: 362  AEVFYENLFSSEPCDSMEEVLDAIPNKVGDFIN-GELGKQYTNE-----EIKTALFQMGS 415

Query: 2009 NKA 2001
             KA
Sbjct: 416  TKA 418



 Score = 23.1 bits (48), Expect(6) = 1e-26
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = -1

Query: 840 AWAKVFQPKDCGELGFKSMKEVNCVALDRTTCRFL 736
           +W+ +  PK  G +GF+     N   L R   R L
Sbjct: 812 SWSWLSTPKFLGGMGFREFTTFNQAMLGRQCWRLL 846