BLASTX nr result
ID: Catharanthus23_contig00010296
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00010296
(235 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002515122.1| U3 small nucleolar ribonucleoprotein protein... 65 4e-11
ref|XP_002302686.2| brix domain-containing family protein [Popul... 66 4e-11
emb|CAN66830.1| hypothetical protein VITISV_030888 [Vitis vinifera] 65 5e-11
ref|XP_002268541.2| PREDICTED: ribosome production factor 1-like... 65 5e-11
ref|XP_003633697.1| PREDICTED: uncharacterized protein LOC100263... 65 2e-10
emb|CBI22317.3| unnamed protein product [Vitis vinifera] 65 2e-10
ref|XP_004136601.1| PREDICTED: ribosome production factor 1-like... 64 2e-10
ref|XP_002320911.1| brix domain-containing family protein [Popul... 63 3e-10
gb|EMJ19447.1| hypothetical protein PRUPE_ppa008044mg [Prunus pe... 62 3e-10
ref|NP_001242604.1| uncharacterized protein LOC100785331 [Glycin... 65 4e-10
gb|EXC13631.1| hypothetical protein L484_019588 [Morus notabilis] 63 7e-10
gb|ESW25224.1| hypothetical protein PHAVU_003G017600g [Phaseolus... 63 1e-09
ref|XP_003637342.1| Ribosome production factor [Medicago truncat... 63 1e-09
gb|EOX95526.1| Ribosomal RNA processing Brix domain protein isof... 60 1e-09
gb|EOX95527.1| Ribosomal RNA processing Brix domain protein isof... 60 1e-09
ref|XP_003548006.1| PREDICTED: LOW QUALITY PROTEIN: ribosome pro... 62 2e-09
emb|CBI21662.3| unnamed protein product [Vitis vinifera] 65 3e-09
ref|XP_006288081.1| hypothetical protein CARUB_v10001313mg [Caps... 60 5e-09
gb|AGN52934.1| MEE49, partial [Silene latifolia] 59 7e-09
gb|AGG38111.1| maternal effect embryo arrest 49-1 protein [Dimoc... 57 9e-09
>ref|XP_002515122.1| U3 small nucleolar ribonucleoprotein protein imp4, putative
[Ricinus communis] gi|223545602|gb|EEF47106.1| U3 small
nucleolar ribonucleoprotein protein imp4, putative
[Ricinus communis]
Length = 362
Score = 64.7 bits (156), Expect(2) = 4e-11
Identities = 27/36 (75%), Positives = 32/36 (88%)
Frame = +1
Query: 127 EL*SSPPPKKIPRTIENSREFDETICKPDDEELFAG 234
EL PPP++ PRTIEN+REFDET+CKPDD+ELFAG
Sbjct: 85 ELGEEPPPRQTPRTIENTREFDETVCKPDDDELFAG 120
Score = 28.5 bits (62), Expect(2) = 4e-11
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = +3
Query: 9 LLPSTIKNKEKRSS 50
+LPSTIKNKEKRS+
Sbjct: 43 ILPSTIKNKEKRSA 56
>ref|XP_002302686.2| brix domain-containing family protein [Populus trichocarpa]
gi|550345298|gb|EEE81959.2| brix domain-containing
family protein [Populus trichocarpa]
Length = 361
Score = 65.9 bits (159), Expect(2) = 4e-11
Identities = 29/36 (80%), Positives = 32/36 (88%)
Frame = +1
Query: 127 EL*SSPPPKKIPRTIENSREFDETICKPDDEELFAG 234
EL PPP+KIPRTIEN+RE DET+CKPDDEELFAG
Sbjct: 81 ELGEEPPPRKIPRTIENTRENDETVCKPDDEELFAG 116
Score = 27.3 bits (59), Expect(2) = 4e-11
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = +3
Query: 9 LLPSTIKNKEKRSSI 53
+LPS IKNKEKRS++
Sbjct: 39 ILPSMIKNKEKRSAV 53
>emb|CAN66830.1| hypothetical protein VITISV_030888 [Vitis vinifera]
Length = 383
Score = 65.5 bits (158), Expect(2) = 5e-11
Identities = 29/36 (80%), Positives = 31/36 (86%)
Frame = +1
Query: 127 EL*SSPPPKKIPRTIENSREFDETICKPDDEELFAG 234
EL PP KKIP TIEN+REFDET+CKPDDEELFAG
Sbjct: 87 ELGEEPPAKKIPHTIENTREFDETVCKPDDEELFAG 122
Score = 27.3 bits (59), Expect(2) = 5e-11
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = +3
Query: 9 LLPSTIKNKEKRSSI 53
+LPS IKNKEKRS++
Sbjct: 45 ILPSMIKNKEKRSAV 59
>ref|XP_002268541.2| PREDICTED: ribosome production factor 1-like [Vitis vinifera]
Length = 346
Score = 65.5 bits (158), Expect(2) = 5e-11
Identities = 29/36 (80%), Positives = 31/36 (86%)
Frame = +1
Query: 127 EL*SSPPPKKIPRTIENSREFDETICKPDDEELFAG 234
EL PP KKIP TIEN+REFDET+CKPDDEELFAG
Sbjct: 66 ELGEEPPAKKIPHTIENTREFDETVCKPDDEELFAG 101
Score = 27.3 bits (59), Expect(2) = 5e-11
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = +3
Query: 9 LLPSTIKNKEKRSSI 53
+LPS IKNKEKRS++
Sbjct: 24 ILPSMIKNKEKRSAV 38
>ref|XP_003633697.1| PREDICTED: uncharacterized protein LOC100263155 [Vitis vinifera]
Length = 801
Score = 64.7 bits (156), Expect(2) = 2e-10
Identities = 29/36 (80%), Positives = 31/36 (86%)
Frame = +1
Query: 127 EL*SSPPPKKIPRTIENSREFDETICKPDDEELFAG 234
EL PP K IPRTIEN+REFDET+CKPDDEELFAG
Sbjct: 521 ELGEEPPVKAIPRTIENTREFDETVCKPDDEELFAG 556
Score = 26.2 bits (56), Expect(2) = 2e-10
Identities = 10/15 (66%), Positives = 14/15 (93%)
Frame = +3
Query: 9 LLPSTIKNKEKRSSI 53
+LPS IKNK+KRS++
Sbjct: 479 ILPSMIKNKDKRSAV 493
>emb|CBI22317.3| unnamed protein product [Vitis vinifera]
Length = 346
Score = 64.7 bits (156), Expect(2) = 2e-10
Identities = 29/36 (80%), Positives = 31/36 (86%)
Frame = +1
Query: 127 EL*SSPPPKKIPRTIENSREFDETICKPDDEELFAG 234
EL PP K IPRTIEN+REFDET+CKPDDEELFAG
Sbjct: 66 ELGEEPPVKAIPRTIENTREFDETVCKPDDEELFAG 101
Score = 26.2 bits (56), Expect(2) = 2e-10
Identities = 10/15 (66%), Positives = 14/15 (93%)
Frame = +3
Query: 9 LLPSTIKNKEKRSSI 53
+LPS IKNK+KRS++
Sbjct: 24 ILPSMIKNKDKRSAV 38
>ref|XP_004136601.1| PREDICTED: ribosome production factor 1-like [Cucumis sativus]
gi|449524700|ref|XP_004169359.1| PREDICTED: ribosome
production factor 1-like [Cucumis sativus]
Length = 332
Score = 63.5 bits (153), Expect(2) = 2e-10
Identities = 29/39 (74%), Positives = 32/39 (82%)
Frame = +1
Query: 118 QRREL*SSPPPKKIPRTIENSREFDETICKPDDEELFAG 234
Q EL PP+KIPRTIEN+RE DET+CKPDDEELFAG
Sbjct: 49 QALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAG 87
Score = 27.3 bits (59), Expect(2) = 2e-10
Identities = 10/16 (62%), Positives = 15/16 (93%)
Frame = +3
Query: 6 LLLPSTIKNKEKRSSI 53
+++PSTIKNKEKR+ +
Sbjct: 9 VIVPSTIKNKEKRAEV 24
>ref|XP_002320911.1| brix domain-containing family protein [Populus trichocarpa]
gi|222861684|gb|EEE99226.1| brix domain-containing
family protein [Populus trichocarpa]
Length = 370
Score = 62.8 bits (151), Expect(2) = 3e-10
Identities = 29/36 (80%), Positives = 32/36 (88%)
Frame = +1
Query: 127 EL*SSPPPKKIPRTIENSREFDETICKPDDEELFAG 234
EL PPP+KIPRTIEN+REFDET+CKPDD ELFAG
Sbjct: 91 ELGEEPPPRKIPRTIENTREFDETVCKPDD-ELFAG 125
Score = 27.3 bits (59), Expect(2) = 3e-10
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = +3
Query: 9 LLPSTIKNKEKRSSI 53
+LPS IKNKEKRS++
Sbjct: 49 ILPSMIKNKEKRSAV 63
>gb|EMJ19447.1| hypothetical protein PRUPE_ppa008044mg [Prunus persica]
Length = 348
Score = 62.4 bits (150), Expect(2) = 3e-10
Identities = 28/36 (77%), Positives = 31/36 (86%)
Frame = +1
Query: 127 EL*SSPPPKKIPRTIENSREFDETICKPDDEELFAG 234
EL P KKIP+TIEN+REFDET+CKPDDEELFAG
Sbjct: 68 ELGEELPAKKIPKTIENTREFDETVCKPDDEELFAG 103
Score = 27.7 bits (60), Expect(2) = 3e-10
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +3
Query: 9 LLPSTIKNKEKRSSI 53
+LPS IKNKEKRS+I
Sbjct: 26 ILPSMIKNKEKRSAI 40
>ref|NP_001242604.1| uncharacterized protein LOC100785331 [Glycine max]
gi|255644450|gb|ACU22729.1| unknown [Glycine max]
Length = 354
Score = 64.7 bits (156), Expect(2) = 4e-10
Identities = 28/36 (77%), Positives = 31/36 (86%)
Frame = +1
Query: 127 EL*SSPPPKKIPRTIENSREFDETICKPDDEELFAG 234
EL PP KK+PRTIEN+RE DET+CKPDDEELFAG
Sbjct: 74 ELGEEPPEKKVPRTIENTRELDETVCKPDDEELFAG 109
Score = 25.0 bits (53), Expect(2) = 4e-10
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +3
Query: 9 LLPSTIKNKEKRSSI 53
L PS IKNKEKRS +
Sbjct: 32 LRPSMIKNKEKRSEL 46
>gb|EXC13631.1| hypothetical protein L484_019588 [Morus notabilis]
Length = 352
Score = 62.8 bits (151), Expect(2) = 7e-10
Identities = 28/36 (77%), Positives = 30/36 (83%)
Frame = +1
Query: 127 EL*SSPPPKKIPRTIENSREFDETICKPDDEELFAG 234
EL PP KIPRTIEN+REFDET+C PDDEELFAG
Sbjct: 73 ELGEEPPAPKIPRTIENTREFDETVCMPDDEELFAG 108
Score = 26.2 bits (56), Expect(2) = 7e-10
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +3
Query: 9 LLPSTIKNKEKRSSI 53
+LPS IKNK+KRS I
Sbjct: 31 ILPSMIKNKDKRSEI 45
>gb|ESW25224.1| hypothetical protein PHAVU_003G017600g [Phaseolus vulgaris]
Length = 357
Score = 63.2 bits (152), Expect(2) = 1e-09
Identities = 28/36 (77%), Positives = 31/36 (86%)
Frame = +1
Query: 127 EL*SSPPPKKIPRTIENSREFDETICKPDDEELFAG 234
EL P KK+PRTIEN+REFDET+CKPDDEELFAG
Sbjct: 77 ELGEELPEKKVPRTIENTREFDETVCKPDDEELFAG 112
Score = 25.0 bits (53), Expect(2) = 1e-09
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +3
Query: 9 LLPSTIKNKEKRSSI 53
L PS IKNKEKRS +
Sbjct: 35 LRPSMIKNKEKRSEL 49
>ref|XP_003637342.1| Ribosome production factor [Medicago truncatula]
gi|355503277|gb|AES84480.1| Ribosome production factor
[Medicago truncatula]
Length = 356
Score = 63.2 bits (152), Expect(2) = 1e-09
Identities = 27/36 (75%), Positives = 31/36 (86%)
Frame = +1
Query: 127 EL*SSPPPKKIPRTIENSREFDETICKPDDEELFAG 234
EL PP KK+P+TIEN+RE DET+CKPDDEELFAG
Sbjct: 74 ELGEEPPEKKVPKTIENTREVDETVCKPDDEELFAG 109
Score = 25.0 bits (53), Expect(2) = 1e-09
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = +3
Query: 15 PSTIKNKEKRSSI 53
PS IKNKEKRS I
Sbjct: 34 PSMIKNKEKRSEI 46
>gb|EOX95526.1| Ribosomal RNA processing Brix domain protein isoform 1 [Theobroma
cacao]
Length = 354
Score = 60.5 bits (145), Expect(2) = 1e-09
Identities = 27/36 (75%), Positives = 30/36 (83%)
Frame = +1
Query: 127 EL*SSPPPKKIPRTIENSREFDETICKPDDEELFAG 234
EL P PK+IPRTIEN+RE DET+C PDDEELFAG
Sbjct: 74 ELGEEPAPKQIPRTIENTREADETVCMPDDEELFAG 109
Score = 27.7 bits (60), Expect(2) = 1e-09
Identities = 10/15 (66%), Positives = 15/15 (100%)
Frame = +3
Query: 9 LLPSTIKNKEKRSSI 53
+LPS++KNKEKRS++
Sbjct: 32 ILPSSVKNKEKRSAV 46
>gb|EOX95527.1| Ribosomal RNA processing Brix domain protein isoform 2 [Theobroma
cacao]
Length = 326
Score = 60.5 bits (145), Expect(2) = 1e-09
Identities = 27/36 (75%), Positives = 30/36 (83%)
Frame = +1
Query: 127 EL*SSPPPKKIPRTIENSREFDETICKPDDEELFAG 234
EL P PK+IPRTIEN+RE DET+C PDDEELFAG
Sbjct: 74 ELGEEPAPKQIPRTIENTREADETVCMPDDEELFAG 109
Score = 27.7 bits (60), Expect(2) = 1e-09
Identities = 10/15 (66%), Positives = 15/15 (100%)
Frame = +3
Query: 9 LLPSTIKNKEKRSSI 53
+LPS++KNKEKRS++
Sbjct: 32 ILPSSVKNKEKRSAV 46
>ref|XP_003548006.1| PREDICTED: LOW QUALITY PROTEIN: ribosome production factor 1-like
[Glycine max]
Length = 354
Score = 62.4 bits (150), Expect(2) = 2e-09
Identities = 26/36 (72%), Positives = 31/36 (86%)
Frame = +1
Query: 127 EL*SSPPPKKIPRTIENSREFDETICKPDDEELFAG 234
+L PP KK+PRTIEN+RE DET+CKPDD+ELFAG
Sbjct: 74 DLGEEPPEKKVPRTIENTRELDETVCKPDDDELFAG 109
Score = 25.0 bits (53), Expect(2) = 2e-09
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +3
Query: 9 LLPSTIKNKEKRSSI 53
L PS IKNKEKRS +
Sbjct: 32 LRPSMIKNKEKRSEL 46
>emb|CBI21662.3| unnamed protein product [Vitis vinifera]
Length = 319
Score = 65.5 bits (158), Expect(2) = 3e-09
Identities = 29/36 (80%), Positives = 31/36 (86%)
Frame = +1
Query: 127 EL*SSPPPKKIPRTIENSREFDETICKPDDEELFAG 234
EL PP KKIP TIEN+REFDET+CKPDDEELFAG
Sbjct: 39 ELGEEPPAKKIPHTIENTREFDETVCKPDDEELFAG 74
Score = 21.2 bits (43), Expect(2) = 3e-09
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = +3
Query: 24 IKNKEKRSSI 53
IKNKEKRS++
Sbjct: 2 IKNKEKRSAV 11
>ref|XP_006288081.1| hypothetical protein CARUB_v10001313mg [Capsella rubella]
gi|482556787|gb|EOA20979.1| hypothetical protein
CARUB_v10001313mg [Capsella rubella]
Length = 348
Score = 59.7 bits (143), Expect(2) = 5e-09
Identities = 27/49 (55%), Positives = 34/49 (69%)
Frame = +1
Query: 85 RNVREPRLVNLQRREL*SSPPPKKIPRTIENSREFDETICKPDDEELFA 231
+ +RE + EL PP K IP+TIEN+RE DET+C+PDDEELFA
Sbjct: 62 KKIRERDAAEKRALELGEEPPQKMIPKTIENTREADETVCRPDDEELFA 110
Score = 26.2 bits (56), Expect(2) = 5e-09
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = +3
Query: 6 LLLPSTIKNKEKRSSI 53
++LPS IKNK+KRS +
Sbjct: 33 VILPSMIKNKDKRSKV 48
>gb|AGN52934.1| MEE49, partial [Silene latifolia]
Length = 192
Score = 59.3 bits (142), Expect(2) = 7e-09
Identities = 29/49 (59%), Positives = 35/49 (71%)
Frame = +1
Query: 85 RNVREPRLVNLQRREL*SSPPPKKIPRTIENSREFDETICKPDDEELFA 231
R+ E R V EL PP +++PRTIEN+RE DET+CKPDDEELFA
Sbjct: 34 RDAAEKRAV-----ELGEEPPARQVPRTIENTREADETVCKPDDEELFA 77
Score = 26.2 bits (56), Expect(2) = 7e-09
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +3
Query: 9 LLPSTIKNKEKRSSI 53
+LPS IKNK+KRS I
Sbjct: 1 ILPSMIKNKQKRSEI 15
>gb|AGG38111.1| maternal effect embryo arrest 49-1 protein [Dimocarpus longan]
Length = 354
Score = 57.4 bits (137), Expect(2) = 9e-09
Identities = 24/36 (66%), Positives = 30/36 (83%)
Frame = +1
Query: 127 EL*SSPPPKKIPRTIENSREFDETICKPDDEELFAG 234
EL PP + +PRTIEN+RE DET+C+PDD+ELFAG
Sbjct: 74 ELGEEPPARMVPRTIENTREPDETVCRPDDDELFAG 109
Score = 27.7 bits (60), Expect(2) = 9e-09
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = +3
Query: 9 LLPSTIKNKEKRSSI 53
++PS IKNKEKRSS+
Sbjct: 32 IMPSMIKNKEKRSSV 46