BLASTX nr result
ID: Catharanthus23_contig00010230
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00010230
(305 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY27723.1| Translation initiation factor eIF-2B subunit delt... 62 8e-08
gb|EOY27722.1| Translation initiation factor eIF-2B subunit delt... 62 8e-08
gb|EOY27718.1| Translation initiation factor eIF-2B subunit delt... 62 8e-08
gb|EOY27717.1| Translation initiation factor eIF-2B subunit delt... 62 8e-08
ref|XP_006352962.1| PREDICTED: la-related protein 7-like [Solanu... 60 2e-07
ref|XP_004233116.1| PREDICTED: uncharacterized protein LOC101245... 60 2e-07
gb|EMJ12644.1| hypothetical protein PRUPE_ppa007255mg [Prunus pe... 60 3e-07
ref|XP_006467479.1| PREDICTED: la-related protein 6-like [Citrus... 59 9e-07
ref|XP_006449682.1| hypothetical protein CICLE_v10015602mg [Citr... 59 9e-07
ref|XP_003593945.1| La-related protein [Medicago truncatula] gi|... 58 1e-06
ref|NP_001062396.1| Os08g0542900 [Oryza sativa Japonica Group] g... 58 1e-06
ref|XP_004486031.1| PREDICTED: la-related protein 7-like [Cicer ... 57 2e-06
ref|XP_002276730.2| PREDICTED: la-related protein 6-like [Vitis ... 57 2e-06
ref|XP_004293591.1| PREDICTED: uncharacterized protein LOC101309... 57 3e-06
ref|XP_004162617.1| PREDICTED: la protein homolog [Cucumis sativus] 57 3e-06
ref|XP_004134576.1| PREDICTED: la protein homolog [Cucumis sativus] 57 3e-06
ref|XP_006858735.1| hypothetical protein AMTR_s00066p00125170 [A... 57 3e-06
gb|ESW19889.1| hypothetical protein PHAVU_006G164000g [Phaseolus... 56 4e-06
ref|XP_004293535.1| PREDICTED: la-related protein 6-like [Fragar... 56 4e-06
ref|XP_006660346.1| PREDICTED: la-related protein 6-like [Oryza ... 55 7e-06
>gb|EOY27723.1| Translation initiation factor eIF-2B subunit delta, putative
isoform 7 [Theobroma cacao]
Length = 297
Score = 62.0 bits (149), Expect = 8e-08
Identities = 25/27 (92%), Positives = 27/27 (100%)
Frame = +2
Query: 56 VEPSKPPPGPRMPDGTRGFTMGRGRPV 136
+EPSKPPPGPRMPDGTRGFTMGRGRP+
Sbjct: 266 IEPSKPPPGPRMPDGTRGFTMGRGRPL 292
>gb|EOY27722.1| Translation initiation factor eIF-2B subunit delta, putative
isoform 6 [Theobroma cacao]
Length = 304
Score = 62.0 bits (149), Expect = 8e-08
Identities = 25/27 (92%), Positives = 27/27 (100%)
Frame = +2
Query: 56 VEPSKPPPGPRMPDGTRGFTMGRGRPV 136
+EPSKPPPGPRMPDGTRGFTMGRGRP+
Sbjct: 273 IEPSKPPPGPRMPDGTRGFTMGRGRPL 299
>gb|EOY27718.1| Translation initiation factor eIF-2B subunit delta, putative
isoform 2 [Theobroma cacao]
Length = 380
Score = 62.0 bits (149), Expect = 8e-08
Identities = 25/27 (92%), Positives = 27/27 (100%)
Frame = +2
Query: 56 VEPSKPPPGPRMPDGTRGFTMGRGRPV 136
+EPSKPPPGPRMPDGTRGFTMGRGRP+
Sbjct: 349 IEPSKPPPGPRMPDGTRGFTMGRGRPL 375
>gb|EOY27717.1| Translation initiation factor eIF-2B subunit delta, putative
isoform 1 [Theobroma cacao]
Length = 387
Score = 62.0 bits (149), Expect = 8e-08
Identities = 25/27 (92%), Positives = 27/27 (100%)
Frame = +2
Query: 56 VEPSKPPPGPRMPDGTRGFTMGRGRPV 136
+EPSKPPPGPRMPDGTRGFTMGRGRP+
Sbjct: 356 IEPSKPPPGPRMPDGTRGFTMGRGRPL 382
>ref|XP_006352962.1| PREDICTED: la-related protein 7-like [Solanum tuberosum]
Length = 373
Score = 60.5 bits (145), Expect = 2e-07
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = +2
Query: 56 VEPSKPPPGPRMPDGTRGFTMGRGRPV 136
VEPSKPPPGPRMPDGTRGF MGRGRP+
Sbjct: 342 VEPSKPPPGPRMPDGTRGFAMGRGRPL 368
>ref|XP_004233116.1| PREDICTED: uncharacterized protein LOC101245912 [Solanum
lycopersicum]
Length = 374
Score = 60.5 bits (145), Expect = 2e-07
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = +2
Query: 56 VEPSKPPPGPRMPDGTRGFTMGRGRPV 136
VEPSKPPPGPRMPDGTRGF MGRGRP+
Sbjct: 343 VEPSKPPPGPRMPDGTRGFAMGRGRPL 369
>gb|EMJ12644.1| hypothetical protein PRUPE_ppa007255mg [Prunus persica]
Length = 376
Score = 60.1 bits (144), Expect = 3e-07
Identities = 25/32 (78%), Positives = 28/32 (87%)
Frame = +2
Query: 56 VEPSKPPPGPRMPDGTRGFTMGRGRPVVITAN 151
+EPSKPPPGPRMPDGTRGFTMGRGR + +N
Sbjct: 343 IEPSKPPPGPRMPDGTRGFTMGRGRTLGANSN 374
>ref|XP_006467479.1| PREDICTED: la-related protein 6-like [Citrus sinensis]
Length = 381
Score = 58.5 bits (140), Expect = 9e-07
Identities = 23/28 (82%), Positives = 27/28 (96%)
Frame = +2
Query: 56 VEPSKPPPGPRMPDGTRGFTMGRGRPVV 139
+EP+KPPPGPRMPDGTRGF+MGRGRP +
Sbjct: 350 LEPTKPPPGPRMPDGTRGFSMGRGRPPI 377
>ref|XP_006449682.1| hypothetical protein CICLE_v10015602mg [Citrus clementina]
gi|557552293|gb|ESR62922.1| hypothetical protein
CICLE_v10015602mg [Citrus clementina]
Length = 381
Score = 58.5 bits (140), Expect = 9e-07
Identities = 23/28 (82%), Positives = 27/28 (96%)
Frame = +2
Query: 56 VEPSKPPPGPRMPDGTRGFTMGRGRPVV 139
+EP+KPPPGPRMPDGTRGF+MGRGRP +
Sbjct: 350 LEPTKPPPGPRMPDGTRGFSMGRGRPPI 377
>ref|XP_003593945.1| La-related protein [Medicago truncatula]
gi|355482993|gb|AES64196.1| La-related protein [Medicago
truncatula] gi|388506372|gb|AFK41252.1| unknown
[Medicago truncatula]
Length = 406
Score = 58.2 bits (139), Expect = 1e-06
Identities = 24/31 (77%), Positives = 27/31 (87%)
Frame = +2
Query: 59 EPSKPPPGPRMPDGTRGFTMGRGRPVVITAN 151
EPSKPPPGP+MPDGTRGF +GRGRP V +N
Sbjct: 376 EPSKPPPGPKMPDGTRGFAIGRGRPPVPASN 406
>ref|NP_001062396.1| Os08g0542900 [Oryza sativa Japonica Group]
gi|42407839|dbj|BAD08982.1| putative RNA recognition
motif (RRM)-containing protein [Oryza sativa Japonica
Group] gi|113624365|dbj|BAF24310.1| Os08g0542900 [Oryza
sativa Japonica Group] gi|215704320|dbj|BAG93754.1|
unnamed protein product [Oryza sativa Japonica Group]
gi|218201546|gb|EEC83973.1| hypothetical protein
OsI_30107 [Oryza sativa Indica Group]
gi|222640954|gb|EEE69086.1| hypothetical protein
OsJ_28141 [Oryza sativa Japonica Group]
Length = 427
Score = 57.8 bits (138), Expect = 1e-06
Identities = 23/25 (92%), Positives = 25/25 (100%)
Frame = +2
Query: 62 PSKPPPGPRMPDGTRGFTMGRGRPV 136
PSKPPPGPRMPDGTRGFTMGRG+P+
Sbjct: 397 PSKPPPGPRMPDGTRGFTMGRGKPL 421
>ref|XP_004486031.1| PREDICTED: la-related protein 7-like [Cicer arietinum]
Length = 426
Score = 57.4 bits (137), Expect = 2e-06
Identities = 24/31 (77%), Positives = 27/31 (87%)
Frame = +2
Query: 59 EPSKPPPGPRMPDGTRGFTMGRGRPVVITAN 151
E SKPPPGPRMPDGTRGF +GRGRP+V +N
Sbjct: 396 EASKPPPGPRMPDGTRGFAIGRGRPLVPASN 426
>ref|XP_002276730.2| PREDICTED: la-related protein 6-like [Vitis vinifera]
gi|297740679|emb|CBI30861.3| unnamed protein product
[Vitis vinifera]
Length = 342
Score = 57.4 bits (137), Expect = 2e-06
Identities = 25/31 (80%), Positives = 26/31 (83%)
Frame = +2
Query: 59 EPSKPPPGPRMPDGTRGFTMGRGRPVVITAN 151
E SKPPPGP+MPDGTRGFTMGRGRP V N
Sbjct: 312 EGSKPPPGPKMPDGTRGFTMGRGRPPVSRPN 342
>ref|XP_004293591.1| PREDICTED: uncharacterized protein LOC101309803 [Fragaria vesca
subsp. vesca]
Length = 284
Score = 57.0 bits (136), Expect = 3e-06
Identities = 24/28 (85%), Positives = 25/28 (89%)
Frame = +2
Query: 56 VEPSKPPPGPRMPDGTRGFTMGRGRPVV 139
+EPSKPPPGPRMPDGTRGFT GRGR V
Sbjct: 251 IEPSKPPPGPRMPDGTRGFTTGRGRTPV 278
>ref|XP_004162617.1| PREDICTED: la protein homolog [Cucumis sativus]
Length = 291
Score = 57.0 bits (136), Expect = 3e-06
Identities = 24/30 (80%), Positives = 26/30 (86%)
Frame = +2
Query: 56 VEPSKPPPGPRMPDGTRGFTMGRGRPVVIT 145
+E SKPPPGP+MPDGTRGFTMGRGRP T
Sbjct: 259 IELSKPPPGPKMPDGTRGFTMGRGRPPTST 288
>ref|XP_004134576.1| PREDICTED: la protein homolog [Cucumis sativus]
Length = 388
Score = 57.0 bits (136), Expect = 3e-06
Identities = 24/30 (80%), Positives = 26/30 (86%)
Frame = +2
Query: 56 VEPSKPPPGPRMPDGTRGFTMGRGRPVVIT 145
+E SKPPPGP+MPDGTRGFTMGRGRP T
Sbjct: 356 IELSKPPPGPKMPDGTRGFTMGRGRPPTST 385
>ref|XP_006858735.1| hypothetical protein AMTR_s00066p00125170 [Amborella trichopoda]
gi|548862846|gb|ERN20202.1| hypothetical protein
AMTR_s00066p00125170 [Amborella trichopoda]
Length = 432
Score = 56.6 bits (135), Expect = 3e-06
Identities = 23/28 (82%), Positives = 25/28 (89%)
Frame = +2
Query: 59 EPSKPPPGPRMPDGTRGFTMGRGRPVVI 142
EP PPPGPRMPDGTRGFTMGRG+P+ I
Sbjct: 402 EPKHPPPGPRMPDGTRGFTMGRGKPMEI 429
>gb|ESW19889.1| hypothetical protein PHAVU_006G164000g [Phaseolus vulgaris]
Length = 395
Score = 56.2 bits (134), Expect = 4e-06
Identities = 24/31 (77%), Positives = 26/31 (83%)
Frame = +2
Query: 59 EPSKPPPGPRMPDGTRGFTMGRGRPVVITAN 151
E SKPPPGPRMPDGTRGF +GRGRP V +N
Sbjct: 365 EASKPPPGPRMPDGTRGFAIGRGRPPVPASN 395
>ref|XP_004293535.1| PREDICTED: la-related protein 6-like [Fragaria vesca subsp. vesca]
Length = 371
Score = 56.2 bits (134), Expect = 4e-06
Identities = 24/28 (85%), Positives = 25/28 (89%)
Frame = +2
Query: 56 VEPSKPPPGPRMPDGTRGFTMGRGRPVV 139
+E SKPPPGPRMPDGTRGFTMGRGR V
Sbjct: 340 IESSKPPPGPRMPDGTRGFTMGRGRTPV 367
>ref|XP_006660346.1| PREDICTED: la-related protein 6-like [Oryza brachyantha]
Length = 415
Score = 55.5 bits (132), Expect = 7e-06
Identities = 22/25 (88%), Positives = 24/25 (96%)
Frame = +2
Query: 62 PSKPPPGPRMPDGTRGFTMGRGRPV 136
P KPPPGPRMPDGTRGFTMGRG+P+
Sbjct: 385 PLKPPPGPRMPDGTRGFTMGRGKPL 409