BLASTX nr result
ID: Catharanthus23_contig00010082
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00010082
(436 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006341754.1| PREDICTED: DNA polymerase alpha subunit B-li... 193 2e-47
ref|XP_004239184.1| PREDICTED: DNA polymerase alpha subunit B-li... 191 1e-46
gb|EMJ25471.1| hypothetical protein PRUPE_ppa018609mg [Prunus pe... 165 7e-39
ref|XP_002265789.1| PREDICTED: DNA polymerase alpha subunit B [V... 163 3e-38
ref|XP_002514998.1| alpha DNA polymerase, putative [Ricinus comm... 160 1e-37
gb|EXB94967.1| DNA polymerase alpha subunit B [Morus notabilis] 157 2e-36
ref|XP_004310044.1| PREDICTED: DNA polymerase alpha subunit B-li... 156 2e-36
ref|XP_006484041.1| PREDICTED: DNA polymerase alpha subunit B-li... 156 3e-36
ref|XP_006438110.1| hypothetical protein CICLE_v10030973mg [Citr... 156 3e-36
ref|XP_006378282.1| DNA polymerase alpha subunit B family protei... 155 5e-36
dbj|BAC43176.1| putative DNA polymerase alpha subunit [Arabidops... 154 1e-35
ref|NP_176930.2| DNA polymerase alpha 2 [Arabidopsis thaliana] g... 154 1e-35
ref|XP_006300633.1| hypothetical protein CARUB_v10019947mg, part... 154 2e-35
ref|XP_002888612.1| DNA polymerase alpha subunit B family [Arabi... 154 2e-35
gb|ESW35722.1| hypothetical protein PHAVU_001G259300g [Phaseolus... 152 6e-35
ref|XP_006391243.1| hypothetical protein EUTSA_v10018287mg [Eutr... 151 1e-34
gb|EPS73745.1| hypothetical protein M569_01012 [Genlisea aurea] 150 2e-34
ref|XP_003601821.1| DNA polymerase alpha subunit B [Medicago tru... 147 2e-33
ref|XP_003552790.1| PREDICTED: DNA polymerase alpha subunit B-li... 146 3e-33
ref|XP_004137446.1| PREDICTED: DNA polymerase alpha subunit B-li... 144 2e-32
>ref|XP_006341754.1| PREDICTED: DNA polymerase alpha subunit B-like [Solanum tuberosum]
Length = 617
Score = 193 bits (490), Expect = 2e-47
Identities = 93/134 (69%), Positives = 107/134 (79%)
Frame = +2
Query: 2 VILVPSTRDANHDLVFPQPAFDIQSSDLKHQVYSITNPGTFSVNEVTVACCSVDILKQLS 181
VILVPS RDA+HD V+PQPAFDIQS DL+HQ+ SITNPG F NEV VACC+VD+LKQLS
Sbjct: 437 VILVPSVRDASHDFVYPQPAFDIQSPDLEHQINSITNPGIFCANEVKVACCTVDVLKQLS 496
Query: 182 AEEISRNPEGGSKQRMATLANHLLNQQSFYPLYPPADGMPLDYSLAHEALQXXXXXXXXX 361
AEEISRNP+GGSKQRM TLANH+LNQ+SFYPLYPPA+G+P+D+SLA EALQ
Sbjct: 497 AEEISRNPQGGSKQRMTTLANHILNQRSFYPLYPPAEGVPIDFSLAPEALQMSTAPDILI 556
Query: 362 XXXXXTHFMRVKDL 403
HF+RV L
Sbjct: 557 LPSDLAHFVRVISL 570
>ref|XP_004239184.1| PREDICTED: DNA polymerase alpha subunit B-like [Solanum
lycopersicum]
Length = 617
Score = 191 bits (484), Expect = 1e-46
Identities = 91/134 (67%), Positives = 106/134 (79%)
Frame = +2
Query: 2 VILVPSTRDANHDLVFPQPAFDIQSSDLKHQVYSITNPGTFSVNEVTVACCSVDILKQLS 181
V+LVPS RDA+HD V+PQPAFDIQ DL+HQ+ SITNPG F NEV VACC+VD+LKQLS
Sbjct: 437 VVLVPSVRDASHDFVYPQPAFDIQLPDLEHQINSITNPGIFCANEVKVACCTVDVLKQLS 496
Query: 182 AEEISRNPEGGSKQRMATLANHLLNQQSFYPLYPPADGMPLDYSLAHEALQXXXXXXXXX 361
AEEISRNP+GGSKQRM TLANH+LNQ+SFYPLYPPA+G+P+D+SLA EALQ
Sbjct: 497 AEEISRNPQGGSKQRMTTLANHILNQRSFYPLYPPAEGVPIDFSLAPEALQMSTDPDILI 556
Query: 362 XXXXXTHFMRVKDL 403
HF+RV L
Sbjct: 557 LPSDLAHFVRVVSL 570
>gb|EMJ25471.1| hypothetical protein PRUPE_ppa018609mg [Prunus persica]
Length = 612
Score = 165 bits (417), Expect = 7e-39
Identities = 78/133 (58%), Positives = 98/133 (73%), Gaps = 1/133 (0%)
Frame = +2
Query: 2 VILVPSTRDANHDLVFPQPAFDIQSSDLKHQVYSITNPGTFSVNEVTVACCSVDILKQLS 181
++LVPS RDANHD VFPQPAFDI ++L+HQ+ S+TNPG F N+V + CCSVDILK LS
Sbjct: 433 IVLVPSIRDANHDFVFPQPAFDIHPANLRHQITSLTNPGIFEGNQVKIGCCSVDILKHLS 492
Query: 182 AEEISRNPEGGS-KQRMATLANHLLNQQSFYPLYPPADGMPLDYSLAHEALQXXXXXXXX 358
EEISRNP+ G RM+ LANH+++Q+SFYPLYPPA+G+PLD+SLA EAL
Sbjct: 493 GEEISRNPKDGKLSDRMSRLANHIISQRSFYPLYPPAEGIPLDFSLAPEALNISLIPDIL 552
Query: 359 XXXXXXTHFMRVK 397
HF++VK
Sbjct: 553 ILPSDMKHFVKVK 565
>ref|XP_002265789.1| PREDICTED: DNA polymerase alpha subunit B [Vitis vinifera]
gi|297738371|emb|CBI27572.3| unnamed protein product
[Vitis vinifera]
Length = 623
Score = 163 bits (412), Expect = 3e-38
Identities = 77/112 (68%), Positives = 92/112 (82%), Gaps = 1/112 (0%)
Frame = +2
Query: 2 VILVPSTRDANHDLVFPQPAFDIQSSDLKHQVYSITNPGTFSVNEVTVACCSVDILKQLS 181
VILVPS RDANHD VFPQPAF I DLKHQ+ S+TNPG F NEV V CC+VD++KQLS
Sbjct: 441 VILVPSIRDANHDFVFPQPAFSIHPPDLKHQITSLTNPGMFDANEVKVGCCTVDVIKQLS 500
Query: 182 AEEISRNP-EGGSKQRMATLANHLLNQQSFYPLYPPADGMPLDYSLAHEALQ 334
E ISRNP +G S+ RM T+ANH+L+Q+SFYPLYP A+G+PLD+SLA EAL+
Sbjct: 501 GEMISRNPTDGSSRDRMTTIANHILSQRSFYPLYPLAEGIPLDFSLAPEALE 552
>ref|XP_002514998.1| alpha DNA polymerase, putative [Ricinus communis]
gi|223546049|gb|EEF47552.1| alpha DNA polymerase,
putative [Ricinus communis]
Length = 621
Score = 160 bits (406), Expect = 1e-37
Identities = 77/135 (57%), Positives = 99/135 (73%), Gaps = 1/135 (0%)
Frame = +2
Query: 2 VILVPSTRDANHDLVFPQPAFDIQSSDLKHQVYSITNPGTFSVNEVTVACCSVDILKQLS 181
V++VPSTRDANHD VFPQPAFDI S+L+HQ+ S+TNPG F N+V V CC+VDI+KQL
Sbjct: 439 VLIVPSTRDANHDFVFPQPAFDIHRSNLQHQIRSLTNPGIFEANQVRVGCCTVDIIKQLG 498
Query: 182 AEEISRNP-EGGSKQRMATLANHLLNQQSFYPLYPPADGMPLDYSLAHEALQXXXXXXXX 358
+EE+SRNP +G RM+ LANH+L+Q+SFYPLYPPA+ +PLD+SLA EAL
Sbjct: 499 SEEMSRNPTDGTPSNRMSRLANHILSQRSFYPLYPPAEDVPLDFSLAPEALHIPSVPHIL 558
Query: 359 XXXXXXTHFMRVKDL 403
+F++V L
Sbjct: 559 IVPSDMKYFIKVLSL 573
>gb|EXB94967.1| DNA polymerase alpha subunit B [Morus notabilis]
Length = 670
Score = 157 bits (396), Expect = 2e-36
Identities = 81/142 (57%), Positives = 95/142 (66%), Gaps = 8/142 (5%)
Frame = +2
Query: 2 VILVPSTRDANHDLVFPQPAFDIQSSDLKHQVYSITNPGTFSVNEVTVACCSVDILKQLS 181
VILVPS RDANHD VFPQPAFDIQ DLKHQ+ SITNPG N+V +ACCSVD+LK LS
Sbjct: 439 VILVPSIRDANHDFVFPQPAFDIQPPDLKHQITSITNPGILEANQVKIACCSVDVLKHLS 498
Query: 182 AEEISRNPEGGS-KQRMATLANHLLNQQS-------FYPLYPPADGMPLDYSLAHEALQX 337
EEISRNP+GG+ RM L NH+L Q+ FYPLYPPA+G+P D SLA EAL+
Sbjct: 499 GEEISRNPKGGAPSDRMGRLVNHILGQRRHAITLHLFYPLYPPAEGVPFDSSLAPEALEI 558
Query: 338 XXXXXXXXXXXXXTHFMRVKDL 403
+F++V L
Sbjct: 559 SMIPDILIVPSDMKYFVKVLPL 580
>ref|XP_004310044.1| PREDICTED: DNA polymerase alpha subunit B-like [Fragaria vesca
subsp. vesca]
Length = 620
Score = 156 bits (395), Expect = 2e-36
Identities = 77/135 (57%), Positives = 93/135 (68%), Gaps = 1/135 (0%)
Frame = +2
Query: 2 VILVPSTRDANHDLVFPQPAFDIQSSDLKHQVYSITNPGTFSVNEVTVACCSVDILKQLS 181
V+LVPS RDANHD VFPQP FDI DLKHQ+ S+TNPG N+V + CCSVDILK LS
Sbjct: 441 VVLVPSVRDANHDFVFPQPPFDIHPPDLKHQITSLTNPGMLEANQVKIGCCSVDILKHLS 500
Query: 182 AEEISRNP-EGGSKQRMATLANHLLNQQSFYPLYPPADGMPLDYSLAHEALQXXXXXXXX 358
EE SR P +G S+ RM+ LANH+L Q+SFYPLYPPA+ +PLD+SLA EAL
Sbjct: 501 GEETSRFPKDGTSRDRMSRLANHILGQRSFYPLYPPAESVPLDFSLAPEALNISLIPDIL 560
Query: 359 XXXXXXTHFMRVKDL 403
+F++V L
Sbjct: 561 ILPSDLKYFVKVLSL 575
>ref|XP_006484041.1| PREDICTED: DNA polymerase alpha subunit B-like [Citrus sinensis]
Length = 620
Score = 156 bits (394), Expect = 3e-36
Identities = 76/134 (56%), Positives = 94/134 (70%), Gaps = 1/134 (0%)
Frame = +2
Query: 5 ILVPSTRDANHDLVFPQPAFDIQSSDLKHQVYSITNPGTFSVNEVTVACCSVDILKQLSA 184
ILVPS RDANHD V PQP FDIQ D+ HQ+ S+TNPGTF N++ V CC+VD+LKQLS
Sbjct: 439 ILVPSIRDANHDFVLPQPPFDIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSG 498
Query: 185 EEISR-NPEGGSKQRMATLANHLLNQQSFYPLYPPADGMPLDYSLAHEALQXXXXXXXXX 361
EE+SR + +G S RM LANH+ NQ+SFYPLYPPA+G+PLD+SLA EAL
Sbjct: 499 EEMSRCSKDGTSNDRMGRLANHIPNQRSFYPLYPPAEGIPLDFSLAQEALTISTIPDIII 558
Query: 362 XXXXXTHFMRVKDL 403
+F++V L
Sbjct: 559 LPSDMKYFIKVLSL 572
>ref|XP_006438110.1| hypothetical protein CICLE_v10030973mg [Citrus clementina]
gi|557540306|gb|ESR51350.1| hypothetical protein
CICLE_v10030973mg [Citrus clementina]
Length = 620
Score = 156 bits (394), Expect = 3e-36
Identities = 76/134 (56%), Positives = 94/134 (70%), Gaps = 1/134 (0%)
Frame = +2
Query: 5 ILVPSTRDANHDLVFPQPAFDIQSSDLKHQVYSITNPGTFSVNEVTVACCSVDILKQLSA 184
ILVPS RDANHD V PQP FDIQ D+ HQ+ S+TNPGTF N++ V CC+VD+LKQLS
Sbjct: 439 ILVPSIRDANHDFVLPQPPFDIQPPDIIHQITSLTNPGTFEANQIKVGCCTVDVLKQLSG 498
Query: 185 EEISR-NPEGGSKQRMATLANHLLNQQSFYPLYPPADGMPLDYSLAHEALQXXXXXXXXX 361
EE+SR + +G S RM LANH+ NQ+SFYPLYPPA+G+PLD+SLA EAL
Sbjct: 499 EEMSRCSKDGTSNDRMGRLANHIPNQRSFYPLYPPAEGIPLDFSLAQEALTISTIPDIII 558
Query: 362 XXXXXTHFMRVKDL 403
+F++V L
Sbjct: 559 LPSDMKYFIKVLSL 572
>ref|XP_006378282.1| DNA polymerase alpha subunit B family protein [Populus trichocarpa]
gi|550329229|gb|ERP56079.1| DNA polymerase alpha subunit
B family protein [Populus trichocarpa]
Length = 618
Score = 155 bits (392), Expect = 5e-36
Identities = 76/135 (56%), Positives = 95/135 (70%), Gaps = 1/135 (0%)
Frame = +2
Query: 2 VILVPSTRDANHDLVFPQPAFDIQSSDLKHQVYSITNPGTFSVNEVTVACCSVDILKQLS 181
VILVPS RDA HD VFPQPAFDI +L+HQ+ +TNPG F N+V V CC+VDILKQ+S
Sbjct: 439 VILVPSIRDAQHDFVFPQPAFDIHLPNLEHQITGLTNPGIFEANQVKVGCCTVDILKQIS 498
Query: 182 AEEISRNP-EGGSKQRMATLANHLLNQQSFYPLYPPADGMPLDYSLAHEALQXXXXXXXX 358
EE+SRNP +G RM+ LANH+++Q+SFYPLYPPA+ +PLD+SLA EAL
Sbjct: 499 GEEMSRNPTDGTPSDRMSRLANHIISQRSFYPLYPPAEDVPLDFSLAPEALHINSIPDIL 558
Query: 359 XXXXXXTHFMRVKDL 403
+FM+V L
Sbjct: 559 ILPSDMKYFMKVLTL 573
>dbj|BAC43176.1| putative DNA polymerase alpha subunit [Arabidopsis thaliana]
gi|29028994|gb|AAO64876.1| At1g67630 [Arabidopsis
thaliana]
Length = 620
Score = 154 bits (389), Expect = 1e-35
Identities = 72/134 (53%), Positives = 94/134 (70%)
Frame = +2
Query: 2 VILVPSTRDANHDLVFPQPAFDIQSSDLKHQVYSITNPGTFSVNEVTVACCSVDILKQLS 181
V+LVPS RDANHD +FPQP FDI DL+HQ+ S++NPGTF N+V V+CC+VD+LKQLS
Sbjct: 442 VVLVPSIRDANHDFIFPQPPFDIHIPDLEHQMTSLSNPGTFEANQVKVSCCTVDVLKQLS 501
Query: 182 AEEISRNPEGGSKQRMATLANHLLNQQSFYPLYPPADGMPLDYSLAHEALQXXXXXXXXX 361
EE+S+NP G RM+ LA+HLL Q+SFYPLYPP + +P D SLA +ALQ
Sbjct: 502 GEEMSKNPSGVPTDRMSRLASHLLRQRSFYPLYPPPESLPYDSSLAPKALQISSIPDILL 561
Query: 362 XXXXXTHFMRVKDL 403
+F+++ L
Sbjct: 562 LPSDMRYFVKILSL 575
>ref|NP_176930.2| DNA polymerase alpha 2 [Arabidopsis thaliana]
gi|332196552|gb|AEE34673.1| DNA polymerase alpha 2
[Arabidopsis thaliana]
Length = 620
Score = 154 bits (389), Expect = 1e-35
Identities = 72/134 (53%), Positives = 94/134 (70%)
Frame = +2
Query: 2 VILVPSTRDANHDLVFPQPAFDIQSSDLKHQVYSITNPGTFSVNEVTVACCSVDILKQLS 181
V+LVPS RDANHD +FPQP FDI DL+HQ+ S++NPGTF N+V V+CC+VD+LKQLS
Sbjct: 442 VVLVPSIRDANHDFIFPQPPFDIHIPDLEHQMTSLSNPGTFEANQVKVSCCTVDVLKQLS 501
Query: 182 AEEISRNPEGGSKQRMATLANHLLNQQSFYPLYPPADGMPLDYSLAHEALQXXXXXXXXX 361
EE+S+NP G RM+ LA+HLL Q+SFYPLYPP + +P D SLA +ALQ
Sbjct: 502 GEEMSKNPSGVPTDRMSRLASHLLRQRSFYPLYPPPESLPYDSSLAPKALQISSIPDILL 561
Query: 362 XXXXXTHFMRVKDL 403
+F+++ L
Sbjct: 562 LPSDMRYFVKILSL 575
>ref|XP_006300633.1| hypothetical protein CARUB_v10019947mg, partial [Capsella rubella]
gi|482569343|gb|EOA33531.1| hypothetical protein
CARUB_v10019947mg, partial [Capsella rubella]
Length = 639
Score = 154 bits (388), Expect = 2e-35
Identities = 74/134 (55%), Positives = 92/134 (68%)
Frame = +2
Query: 2 VILVPSTRDANHDLVFPQPAFDIQSSDLKHQVYSITNPGTFSVNEVTVACCSVDILKQLS 181
V+LVPS RDANHD +FPQ FDI DL+HQ+ S++NPGTF N+V V CC+VD+LKQLS
Sbjct: 461 VVLVPSIRDANHDFIFPQAPFDIHIPDLEHQMTSLSNPGTFEANQVKVGCCTVDVLKQLS 520
Query: 182 AEEISRNPEGGSKQRMATLANHLLNQQSFYPLYPPADGMPLDYSLAHEALQXXXXXXXXX 361
EE+SRNP G RMA LA+HLL Q+SFYPLYPP D +P D SLA +AL+
Sbjct: 521 GEEMSRNPSGVPTDRMARLASHLLRQRSFYPLYPPPDSLPYDSSLAPKALEILEIPDILL 580
Query: 362 XXXXXTHFMRVKDL 403
+F++V L
Sbjct: 581 LPSDMRYFVKVLSL 594
>ref|XP_002888612.1| DNA polymerase alpha subunit B family [Arabidopsis lyrata subsp.
lyrata] gi|297334453|gb|EFH64871.1| DNA polymerase alpha
subunit B family [Arabidopsis lyrata subsp. lyrata]
Length = 619
Score = 154 bits (388), Expect = 2e-35
Identities = 72/134 (53%), Positives = 93/134 (69%)
Frame = +2
Query: 2 VILVPSTRDANHDLVFPQPAFDIQSSDLKHQVYSITNPGTFSVNEVTVACCSVDILKQLS 181
V+LVPS RDANHD +FPQP FDI DL+HQ+ S++NPGTF N+V V CC+VD+LKQLS
Sbjct: 441 VVLVPSIRDANHDFIFPQPPFDIHIPDLEHQMTSLSNPGTFEANQVKVGCCTVDVLKQLS 500
Query: 182 AEEISRNPEGGSKQRMATLANHLLNQQSFYPLYPPADGMPLDYSLAHEALQXXXXXXXXX 361
EE+S+NP G RM+ LA+HLL Q+SFYPLYPP + +P D SLA +ALQ
Sbjct: 501 GEEMSKNPSGVPTDRMSRLASHLLRQRSFYPLYPPPESLPYDSSLAPKALQILSIPDILL 560
Query: 362 XXXXXTHFMRVKDL 403
+F+++ L
Sbjct: 561 LPSDMRYFVKILSL 574
>gb|ESW35722.1| hypothetical protein PHAVU_001G259300g [Phaseolus vulgaris]
Length = 625
Score = 152 bits (383), Expect = 6e-35
Identities = 73/112 (65%), Positives = 85/112 (75%), Gaps = 1/112 (0%)
Frame = +2
Query: 2 VILVPSTRDANHDLVFPQPAFDIQSSDLKHQVYSITNPGTFSVNEVTVACCSVDILKQLS 181
V+LVPS RDANHD VFPQPA +I SD K Q+ S+ NPG F NEV V CC+VD++KQ S
Sbjct: 443 VLLVPSIRDANHDFVFPQPALEINLSDFKSQIVSLANPGIFEANEVKVGCCTVDVIKQTS 502
Query: 182 AEEISRNPEGGSK-QRMATLANHLLNQQSFYPLYPPADGMPLDYSLAHEALQ 334
EEISR G RM+ LANH+LNQQSFYPLYPPA+ +PLD+SLA EALQ
Sbjct: 503 GEEISRTAADGKPIDRMSRLANHILNQQSFYPLYPPAESVPLDFSLAPEALQ 554
>ref|XP_006391243.1| hypothetical protein EUTSA_v10018287mg [Eutrema salsugineum]
gi|557087677|gb|ESQ28529.1| hypothetical protein
EUTSA_v10018287mg [Eutrema salsugineum]
Length = 622
Score = 151 bits (381), Expect = 1e-34
Identities = 70/134 (52%), Positives = 93/134 (69%)
Frame = +2
Query: 2 VILVPSTRDANHDLVFPQPAFDIQSSDLKHQVYSITNPGTFSVNEVTVACCSVDILKQLS 181
V+LVPS RDANHD +FPQP F+I DL+HQ+ S++NPGTF N+V V CC+VD+LK LS
Sbjct: 444 VVLVPSIRDANHDFIFPQPPFNIHIPDLEHQMTSLSNPGTFEANQVKVGCCTVDVLKHLS 503
Query: 182 AEEISRNPEGGSKQRMATLANHLLNQQSFYPLYPPADGMPLDYSLAHEALQXXXXXXXXX 361
EE+S+NP G + RM+ LA+HLL Q+SFYPLYPP + +P D +LA +ALQ
Sbjct: 504 GEEMSKNPSGATTDRMSRLASHLLRQRSFYPLYPPPESLPYDSTLAPKALQISSIPDILL 563
Query: 362 XXXXXTHFMRVKDL 403
+F++V L
Sbjct: 564 LPSDMRYFVKVLSL 577
>gb|EPS73745.1| hypothetical protein M569_01012 [Genlisea aurea]
Length = 595
Score = 150 bits (378), Expect = 2e-34
Identities = 73/114 (64%), Positives = 90/114 (78%), Gaps = 3/114 (2%)
Frame = +2
Query: 2 VILVPSTRDANHDLVFPQPAFDIQSSDLK-HQVYSITNPGTFSVNEVTVACCSVDILKQL 178
+ILVPSTRDA+HD +FPQPAF++ +Q+ SI+NPGTFS NEV VACC+VD+LK L
Sbjct: 404 IILVPSTRDAHHDFIFPQPAFEVHRKGFSSNQICSISNPGTFSANEVKVACCTVDVLKHL 463
Query: 179 SAEEISRN--PEGGSKQRMATLANHLLNQQSFYPLYPPADGMPLDYSLAHEALQ 334
SAEEI RN GGSK R+ LA H+LNQQ+FYPLYPPA+ +PLD+SLA E L+
Sbjct: 464 SAEEICRNVGGGGGSKLRLNNLARHILNQQNFYPLYPPAEDLPLDFSLAKEGLK 517
>ref|XP_003601821.1| DNA polymerase alpha subunit B [Medicago truncatula]
gi|355490869|gb|AES72072.1| DNA polymerase alpha subunit
B [Medicago truncatula]
Length = 616
Score = 147 bits (370), Expect = 2e-33
Identities = 75/134 (55%), Positives = 93/134 (69%), Gaps = 1/134 (0%)
Frame = +2
Query: 2 VILVPSTRDANHDLVFPQPAFDIQSSDLKHQVYSITNPGTFSVNEVTVACCSVDILKQLS 181
V+LVPS RDANHD VFPQPAFDI L Q+ S+TNPG F NEV V CC++D+LKQ+S
Sbjct: 438 VLLVPSIRDANHDFVFPQPAFDISQPQL--QIASLTNPGIFEANEVKVGCCTLDVLKQIS 495
Query: 182 AEEISR-NPEGGSKQRMATLANHLLNQQSFYPLYPPADGMPLDYSLAHEALQXXXXXXXX 358
EEISR + + R++ LANH+LNQQSFYPLYPPA+ +PLD+SLA EALQ
Sbjct: 496 GEEISRISADRKPIDRLSRLANHILNQQSFYPLYPPAESVPLDFSLAPEALQLPLVPDVL 555
Query: 359 XXXXXXTHFMRVKD 400
+F++V D
Sbjct: 556 ILPSDLKYFVKVLD 569
>ref|XP_003552790.1| PREDICTED: DNA polymerase alpha subunit B-like [Glycine max]
Length = 606
Score = 146 bits (368), Expect = 3e-33
Identities = 72/112 (64%), Positives = 87/112 (77%), Gaps = 1/112 (0%)
Frame = +2
Query: 2 VILVPSTRDANHDLVFPQPAFDIQSSDLKHQVYSITNPGTFSVNEVTVACCSVDILKQLS 181
V+LVPS RDANHD VFPQPA D++S Q+ S++NPG F N+V V CC+VDILKQ+S
Sbjct: 431 VVLVPSIRDANHDFVFPQPALDMKS-----QIVSLSNPGIFEANKVKVGCCTVDILKQIS 485
Query: 182 AEEISRNPEGGSK-QRMATLANHLLNQQSFYPLYPPADGMPLDYSLAHEALQ 334
EEISR G R++ LANH+LNQQSFYPLYPPA+G+PLD+SLA EALQ
Sbjct: 486 GEEISRTAADGKPIDRLSRLANHILNQQSFYPLYPPAEGVPLDFSLAPEALQ 537
>ref|XP_004137446.1| PREDICTED: DNA polymerase alpha subunit B-like [Cucumis sativus]
gi|449486914|ref|XP_004157440.1| PREDICTED: DNA
polymerase alpha subunit B-like [Cucumis sativus]
Length = 622
Score = 144 bits (362), Expect = 2e-32
Identities = 72/135 (53%), Positives = 94/135 (69%), Gaps = 1/135 (0%)
Frame = +2
Query: 2 VILVPSTRDANHDLVFPQPAFDIQSSDLKHQVYSITNPGTFSVNEVTVACCSVDILKQLS 181
V+L+PSTRDANHD FPQPAFDI S DLK Q+ S NP N+ +ACC++DIL+ LS
Sbjct: 441 VLLMPSTRDANHDFAFPQPAFDIPS-DLKLQISSPPNPCILEANQAKIACCTMDILRHLS 499
Query: 182 AEEISRN-PEGGSKQRMATLANHLLNQQSFYPLYPPADGMPLDYSLAHEALQXXXXXXXX 358
EE+SRN +GG+ R++TLA+H+L Q+SFYPLYPPA+G+PLD+SLA +AL
Sbjct: 500 GEELSRNLTKGGTNDRLSTLASHILRQRSFYPLYPPAEGVPLDFSLAPQALDISVIPDIL 559
Query: 359 XXXXXXTHFMRVKDL 403
HF++V L
Sbjct: 560 ILPSDMKHFVKVISL 574