BLASTX nr result

ID: Catharanthus23_contig00010045 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00010045
         (542 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMJ10802.1| hypothetical protein PRUPE_ppa011480mg [Prunus pe...   155   7e-36
emb|CBI34365.3| unnamed protein product [Vitis vinifera]              153   2e-35
ref|XP_002279684.1| PREDICTED: uncharacterized RNA-binding prote...   153   2e-35
ref|XP_004298819.1| PREDICTED: uncharacterized RNA-binding prote...   152   6e-35
ref|XP_002509834.1| Arginine/serine-rich-splicing factor, putati...   151   8e-35
ref|XP_002304510.1| hypothetical protein POPTR_0003s13030g [Popu...   148   7e-34
ref|XP_006476526.1| PREDICTED: uncharacterized RNA-binding prote...   147   2e-33
ref|XP_006476525.1| PREDICTED: uncharacterized RNA-binding prote...   147   2e-33
ref|XP_006476524.1| PREDICTED: uncharacterized RNA-binding prote...   147   2e-33
gb|EOY24793.1| RNA-binding family protein [Theobroma cacao]           145   8e-33
ref|XP_006439511.1| hypothetical protein CICLE_v10021507mg [Citr...   144   2e-32
ref|XP_006439510.1| hypothetical protein CICLE_v10021507mg [Citr...   144   2e-32
ref|XP_006439508.1| hypothetical protein CICLE_v10021507mg [Citr...   144   2e-32
ref|XP_006439507.1| hypothetical protein CICLE_v10021507mg [Citr...   144   2e-32
ref|XP_006439505.1| hypothetical protein CICLE_v10021507mg [Citr...   144   2e-32
ref|XP_006439504.1| hypothetical protein CICLE_v10021507mg [Citr...   144   2e-32
ref|XP_003536651.1| PREDICTED: uncharacterized RNA-binding prote...   142   7e-32
gb|EXB37321.1| Uncharacterized RNA-binding protein [Morus notabi...   141   9e-32
ref|XP_006827527.1| hypothetical protein AMTR_s00009p00202570 [A...   137   1e-30
ref|XP_004973345.1| PREDICTED: serine/arginine-rich splicing fac...   136   4e-30

>gb|EMJ10802.1| hypothetical protein PRUPE_ppa011480mg [Prunus persica]
          Length = 208

 Score =  155 bits (391), Expect = 7e-36
 Identities = 75/84 (89%), Positives = 79/84 (94%)
 Frame = +3

Query: 291 SVDAVNPGNNLYVTGLSTRVTSSELEDFFNKEGKVTECHLVTDPRTKESRGFAFVTMETN 470
           SVDA NPGNNLYVTGLSTRVTSS+LE FFNKEGKV ECHLVTDPRT+ESRGF FVTMET 
Sbjct: 39  SVDASNPGNNLYVTGLSTRVTSSDLEKFFNKEGKVLECHLVTDPRTRESRGFGFVTMETV 98

Query: 471 EDAERCIKYLNRSVLEGRLITVEK 542
           EDAERC+KYLNRSVLEGRL+TVEK
Sbjct: 99  EDAERCVKYLNRSVLEGRLVTVEK 122


>emb|CBI34365.3| unnamed protein product [Vitis vinifera]
          Length = 133

 Score =  153 bits (387), Expect = 2e-35
 Identities = 74/85 (87%), Positives = 79/85 (92%)
 Frame = +3

Query: 288 DSVDAVNPGNNLYVTGLSTRVTSSELEDFFNKEGKVTECHLVTDPRTKESRGFAFVTMET 467
           DSVDAVNPGNNLYVTGLSTRV +S+LE +FN EGKV ECHLVTDPRT+ESRGF FVTMET
Sbjct: 45  DSVDAVNPGNNLYVTGLSTRVNASDLEKYFNSEGKVVECHLVTDPRTRESRGFGFVTMET 104

Query: 468 NEDAERCIKYLNRSVLEGRLITVEK 542
            EDA+RCIKYLNRSVLEGRLITVEK
Sbjct: 105 VEDADRCIKYLNRSVLEGRLITVEK 129


>ref|XP_002279684.1| PREDICTED: uncharacterized RNA-binding protein C25G10.01 [Vitis
           vinifera]
          Length = 211

 Score =  153 bits (387), Expect = 2e-35
 Identities = 74/85 (87%), Positives = 79/85 (92%)
 Frame = +3

Query: 288 DSVDAVNPGNNLYVTGLSTRVTSSELEDFFNKEGKVTECHLVTDPRTKESRGFAFVTMET 467
           DSVDAVNPGNNLYVTGLSTRV +S+LE +FN EGKV ECHLVTDPRT+ESRGF FVTMET
Sbjct: 45  DSVDAVNPGNNLYVTGLSTRVNASDLEKYFNSEGKVVECHLVTDPRTRESRGFGFVTMET 104

Query: 468 NEDAERCIKYLNRSVLEGRLITVEK 542
            EDA+RCIKYLNRSVLEGRLITVEK
Sbjct: 105 VEDADRCIKYLNRSVLEGRLITVEK 129


>ref|XP_004298819.1| PREDICTED: uncharacterized RNA-binding protein C25G10.01-like
           [Fragaria vesca subsp. vesca]
          Length = 222

 Score =  152 bits (383), Expect = 6e-35
 Identities = 73/84 (86%), Positives = 80/84 (95%)
 Frame = +3

Query: 291 SVDAVNPGNNLYVTGLSTRVTSSELEDFFNKEGKVTECHLVTDPRTKESRGFAFVTMETN 470
           SVDA NPGNNLYVTGLSTRVTS+++E FFNKEGKV +CHLVTDPR++ESRGFAFVTMET 
Sbjct: 39  SVDASNPGNNLYVTGLSTRVTSADVEKFFNKEGKVLDCHLVTDPRSRESRGFAFVTMETV 98

Query: 471 EDAERCIKYLNRSVLEGRLITVEK 542
           EDAERCIKYLNRSVLEGRL+TVEK
Sbjct: 99  EDAERCIKYLNRSVLEGRLVTVEK 122


>ref|XP_002509834.1| Arginine/serine-rich-splicing factor, putative [Ricinus communis]
           gi|223549733|gb|EEF51221.1|
           Arginine/serine-rich-splicing factor, putative [Ricinus
           communis]
          Length = 204

 Score =  151 bits (382), Expect = 8e-35
 Identities = 73/84 (86%), Positives = 78/84 (92%)
 Frame = +3

Query: 291 SVDAVNPGNNLYVTGLSTRVTSSELEDFFNKEGKVTECHLVTDPRTKESRGFAFVTMETN 470
           SVDA NPGNNLYVTGLSTRVT+ +LE +F KEGKV ECHLVTDPRT+ESRGFAFVTMET 
Sbjct: 39  SVDAANPGNNLYVTGLSTRVTTGDLEKYFGKEGKVLECHLVTDPRTRESRGFAFVTMETL 98

Query: 471 EDAERCIKYLNRSVLEGRLITVEK 542
           EDAERC+KYLNRSVLEGRLITVEK
Sbjct: 99  EDAERCVKYLNRSVLEGRLITVEK 122


>ref|XP_002304510.1| hypothetical protein POPTR_0003s13030g [Populus trichocarpa]
           gi|222841942|gb|EEE79489.1| hypothetical protein
           POPTR_0003s13030g [Populus trichocarpa]
          Length = 208

 Score =  148 bits (374), Expect = 7e-34
 Identities = 72/85 (84%), Positives = 78/85 (91%)
 Frame = +3

Query: 288 DSVDAVNPGNNLYVTGLSTRVTSSELEDFFNKEGKVTECHLVTDPRTKESRGFAFVTMET 467
           DS DA NPGNNLYVTGLSTRVTSS+LE +F+ EGKV ECHLVTDPRT+ESRGFAFVTMET
Sbjct: 39  DSGDASNPGNNLYVTGLSTRVTSSDLEKYFSSEGKVLECHLVTDPRTRESRGFAFVTMET 98

Query: 468 NEDAERCIKYLNRSVLEGRLITVEK 542
            EDA RC+KYLNRSVLEGR+ITVEK
Sbjct: 99  VEDANRCVKYLNRSVLEGRVITVEK 123


>ref|XP_006476526.1| PREDICTED: uncharacterized RNA-binding protein C25G10.01-like
           isoform X3 [Citrus sinensis]
          Length = 156

 Score =  147 bits (370), Expect = 2e-33
 Identities = 72/84 (85%), Positives = 77/84 (91%)
 Frame = +3

Query: 291 SVDAVNPGNNLYVTGLSTRVTSSELEDFFNKEGKVTECHLVTDPRTKESRGFAFVTMETN 470
           S DA NPGNNLYVTGLSTRVT+++LE FF  EGKVTECHLVTDPRT+ESRGFAFVTMET 
Sbjct: 42  SPDAANPGNNLYVTGLSTRVTNADLEKFFGGEGKVTECHLVTDPRTRESRGFAFVTMETV 101

Query: 471 EDAERCIKYLNRSVLEGRLITVEK 542
           E A+RCIKYLNRSVLEGRLITVEK
Sbjct: 102 EGADRCIKYLNRSVLEGRLITVEK 125


>ref|XP_006476525.1| PREDICTED: uncharacterized RNA-binding protein C25G10.01-like
           isoform X2 [Citrus sinensis]
          Length = 201

 Score =  147 bits (370), Expect = 2e-33
 Identities = 72/84 (85%), Positives = 77/84 (91%)
 Frame = +3

Query: 291 SVDAVNPGNNLYVTGLSTRVTSSELEDFFNKEGKVTECHLVTDPRTKESRGFAFVTMETN 470
           S DA NPGNNLYVTGLSTRVT+++LE FF  EGKVTECHLVTDPRT+ESRGFAFVTMET 
Sbjct: 30  SPDAANPGNNLYVTGLSTRVTNADLEKFFGGEGKVTECHLVTDPRTRESRGFAFVTMETV 89

Query: 471 EDAERCIKYLNRSVLEGRLITVEK 542
           E A+RCIKYLNRSVLEGRLITVEK
Sbjct: 90  EGADRCIKYLNRSVLEGRLITVEK 113


>ref|XP_006476524.1| PREDICTED: uncharacterized RNA-binding protein C25G10.01-like
           isoform X1 [Citrus sinensis]
          Length = 213

 Score =  147 bits (370), Expect = 2e-33
 Identities = 72/84 (85%), Positives = 77/84 (91%)
 Frame = +3

Query: 291 SVDAVNPGNNLYVTGLSTRVTSSELEDFFNKEGKVTECHLVTDPRTKESRGFAFVTMETN 470
           S DA NPGNNLYVTGLSTRVT+++LE FF  EGKVTECHLVTDPRT+ESRGFAFVTMET 
Sbjct: 42  SPDAANPGNNLYVTGLSTRVTNADLEKFFGGEGKVTECHLVTDPRTRESRGFAFVTMETV 101

Query: 471 EDAERCIKYLNRSVLEGRLITVEK 542
           E A+RCIKYLNRSVLEGRLITVEK
Sbjct: 102 EGADRCIKYLNRSVLEGRLITVEK 125


>gb|EOY24793.1| RNA-binding family protein [Theobroma cacao]
          Length = 200

 Score =  145 bits (365), Expect = 8e-33
 Identities = 71/84 (84%), Positives = 76/84 (90%)
 Frame = +3

Query: 291 SVDAVNPGNNLYVTGLSTRVTSSELEDFFNKEGKVTECHLVTDPRTKESRGFAFVTMETN 470
           S DA NPGNNLYVTGLSTRVT+++LE +F  EGKV ECHLVTDPRT+ESRGFAFVTMET 
Sbjct: 35  SQDASNPGNNLYVTGLSTRVTTADLEKYFGNEGKVVECHLVTDPRTRESRGFAFVTMETV 94

Query: 471 EDAERCIKYLNRSVLEGRLITVEK 542
           E AERCIKYLNRSVLEGRLITVEK
Sbjct: 95  EGAERCIKYLNRSVLEGRLITVEK 118


>ref|XP_006439511.1| hypothetical protein CICLE_v10021507mg [Citrus clementina]
           gi|557541773|gb|ESR52751.1| hypothetical protein
           CICLE_v10021507mg [Citrus clementina]
          Length = 286

 Score =  144 bits (362), Expect = 2e-32
 Identities = 71/84 (84%), Positives = 76/84 (90%)
 Frame = +3

Query: 291 SVDAVNPGNNLYVTGLSTRVTSSELEDFFNKEGKVTECHLVTDPRTKESRGFAFVTMETN 470
           S DA NPGNNLYVTGLSTRVT+++LE FF  EGKVTECHLVTDPRT+ES GFAFVTMET 
Sbjct: 42  SPDAANPGNNLYVTGLSTRVTNADLEKFFGGEGKVTECHLVTDPRTRESCGFAFVTMETV 101

Query: 471 EDAERCIKYLNRSVLEGRLITVEK 542
           E A+RCIKYLNRSVLEGRLITVEK
Sbjct: 102 EGADRCIKYLNRSVLEGRLITVEK 125


>ref|XP_006439510.1| hypothetical protein CICLE_v10021507mg [Citrus clementina]
           gi|557541772|gb|ESR52750.1| hypothetical protein
           CICLE_v10021507mg [Citrus clementina]
          Length = 230

 Score =  144 bits (362), Expect = 2e-32
 Identities = 71/84 (84%), Positives = 76/84 (90%)
 Frame = +3

Query: 291 SVDAVNPGNNLYVTGLSTRVTSSELEDFFNKEGKVTECHLVTDPRTKESRGFAFVTMETN 470
           S DA NPGNNLYVTGLSTRVT+++LE FF  EGKVTECHLVTDPRT+ES GFAFVTMET 
Sbjct: 42  SPDAANPGNNLYVTGLSTRVTNADLEKFFGGEGKVTECHLVTDPRTRESCGFAFVTMETV 101

Query: 471 EDAERCIKYLNRSVLEGRLITVEK 542
           E A+RCIKYLNRSVLEGRLITVEK
Sbjct: 102 EGADRCIKYLNRSVLEGRLITVEK 125


>ref|XP_006439508.1| hypothetical protein CICLE_v10021507mg [Citrus clementina]
           gi|557541770|gb|ESR52748.1| hypothetical protein
           CICLE_v10021507mg [Citrus clementina]
          Length = 218

 Score =  144 bits (362), Expect = 2e-32
 Identities = 71/84 (84%), Positives = 76/84 (90%)
 Frame = +3

Query: 291 SVDAVNPGNNLYVTGLSTRVTSSELEDFFNKEGKVTECHLVTDPRTKESRGFAFVTMETN 470
           S DA NPGNNLYVTGLSTRVT+++LE FF  EGKVTECHLVTDPRT+ES GFAFVTMET 
Sbjct: 30  SPDAANPGNNLYVTGLSTRVTNADLEKFFGGEGKVTECHLVTDPRTRESCGFAFVTMETV 89

Query: 471 EDAERCIKYLNRSVLEGRLITVEK 542
           E A+RCIKYLNRSVLEGRLITVEK
Sbjct: 90  EGADRCIKYLNRSVLEGRLITVEK 113


>ref|XP_006439507.1| hypothetical protein CICLE_v10021507mg [Citrus clementina]
           gi|557541769|gb|ESR52747.1| hypothetical protein
           CICLE_v10021507mg [Citrus clementina]
          Length = 274

 Score =  144 bits (362), Expect = 2e-32
 Identities = 71/84 (84%), Positives = 76/84 (90%)
 Frame = +3

Query: 291 SVDAVNPGNNLYVTGLSTRVTSSELEDFFNKEGKVTECHLVTDPRTKESRGFAFVTMETN 470
           S DA NPGNNLYVTGLSTRVT+++LE FF  EGKVTECHLVTDPRT+ES GFAFVTMET 
Sbjct: 30  SPDAANPGNNLYVTGLSTRVTNADLEKFFGGEGKVTECHLVTDPRTRESCGFAFVTMETV 89

Query: 471 EDAERCIKYLNRSVLEGRLITVEK 542
           E A+RCIKYLNRSVLEGRLITVEK
Sbjct: 90  EGADRCIKYLNRSVLEGRLITVEK 113


>ref|XP_006439505.1| hypothetical protein CICLE_v10021507mg [Citrus clementina]
           gi|567894036|ref|XP_006439506.1| hypothetical protein
           CICLE_v10021507mg [Citrus clementina]
           gi|557541767|gb|ESR52745.1| hypothetical protein
           CICLE_v10021507mg [Citrus clementina]
           gi|557541768|gb|ESR52746.1| hypothetical protein
           CICLE_v10021507mg [Citrus clementina]
          Length = 214

 Score =  144 bits (362), Expect = 2e-32
 Identities = 71/84 (84%), Positives = 76/84 (90%)
 Frame = +3

Query: 291 SVDAVNPGNNLYVTGLSTRVTSSELEDFFNKEGKVTECHLVTDPRTKESRGFAFVTMETN 470
           S DA NPGNNLYVTGLSTRVT+++LE FF  EGKVTECHLVTDPRT+ES GFAFVTMET 
Sbjct: 42  SPDAANPGNNLYVTGLSTRVTNADLEKFFGGEGKVTECHLVTDPRTRESCGFAFVTMETV 101

Query: 471 EDAERCIKYLNRSVLEGRLITVEK 542
           E A+RCIKYLNRSVLEGRLITVEK
Sbjct: 102 EGADRCIKYLNRSVLEGRLITVEK 125


>ref|XP_006439504.1| hypothetical protein CICLE_v10021507mg [Citrus clementina]
           gi|567894042|ref|XP_006439509.1| hypothetical protein
           CICLE_v10021507mg [Citrus clementina]
           gi|557541766|gb|ESR52744.1| hypothetical protein
           CICLE_v10021507mg [Citrus clementina]
           gi|557541771|gb|ESR52749.1| hypothetical protein
           CICLE_v10021507mg [Citrus clementina]
          Length = 202

 Score =  144 bits (362), Expect = 2e-32
 Identities = 71/84 (84%), Positives = 76/84 (90%)
 Frame = +3

Query: 291 SVDAVNPGNNLYVTGLSTRVTSSELEDFFNKEGKVTECHLVTDPRTKESRGFAFVTMETN 470
           S DA NPGNNLYVTGLSTRVT+++LE FF  EGKVTECHLVTDPRT+ES GFAFVTMET 
Sbjct: 30  SPDAANPGNNLYVTGLSTRVTNADLEKFFGGEGKVTECHLVTDPRTRESCGFAFVTMETV 89

Query: 471 EDAERCIKYLNRSVLEGRLITVEK 542
           E A+RCIKYLNRSVLEGRLITVEK
Sbjct: 90  EGADRCIKYLNRSVLEGRLITVEK 113


>ref|XP_003536651.1| PREDICTED: uncharacterized RNA-binding protein C25G10.01-like
           isoform X1 [Glycine max]
          Length = 191

 Score =  142 bits (357), Expect = 7e-32
 Identities = 67/85 (78%), Positives = 73/85 (85%)
 Frame = +3

Query: 288 DSVDAVNPGNNLYVTGLSTRVTSSELEDFFNKEGKVTECHLVTDPRTKESRGFAFVTMET 467
           DS D  NPGNNLYVTGLSTR+T S+L  +F+KEGKV +CHLV DP TKESRGF FVTMET
Sbjct: 37  DSADVENPGNNLYVTGLSTRITDSDLHKYFSKEGKVVDCHLVKDPHTKESRGFGFVTMET 96

Query: 468 NEDAERCIKYLNRSVLEGRLITVEK 542
           N+DAE CIKYLNRSV EGRLITVEK
Sbjct: 97  NDDAECCIKYLNRSVFEGRLITVEK 121


>gb|EXB37321.1| Uncharacterized RNA-binding protein [Morus notabilis]
          Length = 314

 Score =  141 bits (356), Expect = 9e-32
 Identities = 70/85 (82%), Positives = 74/85 (87%)
 Frame = +3

Query: 288 DSVDAVNPGNNLYVTGLSTRVTSSELEDFFNKEGKVTECHLVTDPRTKESRGFAFVTMET 467
           DS  A NPGNNLYVTGLSTRVT+S+LE FF KEGKV  CHLVTDP TKESRGF FVTMET
Sbjct: 148 DSDGADNPGNNLYVTGLSTRVTTSDLEKFFGKEGKVVACHLVTDPHTKESRGFGFVTMET 207

Query: 468 NEDAERCIKYLNRSVLEGRLITVEK 542
            EDA+RCIK LNRSVLEGRL+TVEK
Sbjct: 208 VEDADRCIKQLNRSVLEGRLVTVEK 232


>ref|XP_006827527.1| hypothetical protein AMTR_s00009p00202570 [Amborella trichopoda]
           gi|548832147|gb|ERM94943.1| hypothetical protein
           AMTR_s00009p00202570 [Amborella trichopoda]
          Length = 300

 Score =  137 bits (346), Expect = 1e-30
 Identities = 67/85 (78%), Positives = 72/85 (84%)
 Frame = +3

Query: 288 DSVDAVNPGNNLYVTGLSTRVTSSELEDFFNKEGKVTECHLVTDPRTKESRGFAFVTMET 467
           D  DA NPGNNLY+TGLSTRVT+ ELE  F  EGKV ECHLV DPRT+ESRGF FVTMET
Sbjct: 30  DPDDAQNPGNNLYITGLSTRVTTRELERHFQSEGKVLECHLVVDPRTRESRGFGFVTMET 89

Query: 468 NEDAERCIKYLNRSVLEGRLITVEK 542
            EDA+RCIKYLNRSVLEGR+I VEK
Sbjct: 90  IEDADRCIKYLNRSVLEGRVIAVEK 114


>ref|XP_004973345.1| PREDICTED: serine/arginine-rich splicing factor 2-like isoform X1
           [Setaria italica] gi|514795629|ref|XP_004973346.1|
           PREDICTED: serine/arginine-rich splicing factor 2-like
           isoform X2 [Setaria italica]
           gi|514795632|ref|XP_004973347.1| PREDICTED:
           serine/arginine-rich splicing factor 2-like isoform X3
           [Setaria italica]
          Length = 283

 Score =  136 bits (342), Expect = 4e-30
 Identities = 65/84 (77%), Positives = 74/84 (88%)
 Frame = +3

Query: 291 SVDAVNPGNNLYVTGLSTRVTSSELEDFFNKEGKVTECHLVTDPRTKESRGFAFVTMETN 470
           S+D  NPGNNLYVTGLSTRVT  +LE FF+KEGKV  CH+V DPR+KESRGFAFVTM+T 
Sbjct: 81  SLDDRNPGNNLYVTGLSTRVTEDDLEKFFSKEGKVKNCHVVLDPRSKESRGFAFVTMDTV 140

Query: 471 EDAERCIKYLNRSVLEGRLITVEK 542
           EDA RCIKYL+R+VLEGRL+TVEK
Sbjct: 141 EDARRCIKYLHRTVLEGRLVTVEK 164


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