BLASTX nr result
ID: Catharanthus23_contig00009724
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00009724
(313 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006478302.1| PREDICTED: uncharacterized protein LOC102612... 90 3e-16
ref|XP_006464980.1| PREDICTED: uncharacterized protein LOC102630... 89 8e-16
ref|XP_006480387.1| PREDICTED: uncharacterized protein LOC102611... 87 2e-15
gb|ABG37668.1| gag protein [Populus trichocarpa] 86 4e-15
gb|ABG37657.1| integrase [Populus trichocarpa] 86 4e-15
gb|ABG37671.1| integrase [Populus trichocarpa] 86 5e-15
gb|ABD63142.1| Retrotransposon gag protein [Asparagus officinalis] 83 3e-14
gb|ABG37656.1| integrase [Populus trichocarpa] 83 4e-14
gb|ABG37670.1| integrase [Populus trichocarpa] 82 7e-14
gb|ABG37655.1| integrase [Populus trichocarpa] 79 5e-13
gb|ABG37654.1| integrase [Populus trichocarpa] 79 5e-13
gb|AAQ82031.1| pol [Pisum sativum] 79 5e-13
ref|XP_006584374.1| PREDICTED: uncharacterized protein LOC102669... 79 8e-13
gb|AAD23707.1| putative retroelement pol polyprotein [Arabidopsi... 77 2e-12
emb|CAN65053.1| hypothetical protein VITISV_033133 [Vitis vinifera] 77 2e-12
emb|CAN73583.1| hypothetical protein VITISV_038273 [Vitis vinifera] 77 2e-12
ref|XP_002267531.2| PREDICTED: uncharacterized protein LOC100266... 77 3e-12
emb|CAN64594.1| hypothetical protein VITISV_035062 [Vitis vinifera] 77 3e-12
ref|XP_006575971.1| PREDICTED: uncharacterized protein LOC102659... 76 4e-12
emb|CAN78799.1| hypothetical protein VITISV_038948 [Vitis vinifera] 76 4e-12
>ref|XP_006478302.1| PREDICTED: uncharacterized protein LOC102612665, partial [Citrus
sinensis]
Length = 206
Score = 90.1 bits (222), Expect = 3e-16
Identities = 43/48 (89%), Positives = 44/48 (91%)
Frame = -1
Query: 313 AFLRKYSITHKVATPYHPQTSGQVEVSNREIKSILEKTVRPDRKDWSL 170
A L KYSITHKVATPYH QTSGQVE+SNREIK ILEKTVRPDRKDWSL
Sbjct: 8 ALLTKYSITHKVATPYHLQTSGQVEISNREIKHILEKTVRPDRKDWSL 55
>ref|XP_006464980.1| PREDICTED: uncharacterized protein LOC102630476, partial [Citrus
sinensis]
Length = 284
Score = 88.6 bits (218), Expect = 8e-16
Identities = 42/48 (87%), Positives = 43/48 (89%)
Frame = -1
Query: 313 AFLRKYSITHKVATPYHPQTSGQVEVSNREIKSILEKTVRPDRKDWSL 170
A L KYSITHKVATPYHPQTSGQVE+SNREIK ILEK VRPD KDWSL
Sbjct: 85 ALLTKYSITHKVATPYHPQTSGQVEISNREIKHILEKMVRPDIKDWSL 132
>ref|XP_006480387.1| PREDICTED: uncharacterized protein LOC102611294 [Citrus sinensis]
Length = 1430
Score = 87.4 bits (215), Expect = 2e-15
Identities = 40/48 (83%), Positives = 44/48 (91%)
Frame = -1
Query: 313 AFLRKYSITHKVATPYHPQTSGQVEVSNREIKSILEKTVRPDRKDWSL 170
A RKY+ITHKV+T YHPQTSGQVEVSNRE+KSILEKTV P+RKDWSL
Sbjct: 1226 ALFRKYNITHKVSTSYHPQTSGQVEVSNREVKSILEKTVNPNRKDWSL 1273
>gb|ABG37668.1| gag protein [Populus trichocarpa]
Length = 1886
Score = 86.3 bits (212), Expect = 4e-15
Identities = 38/48 (79%), Positives = 44/48 (91%)
Frame = -1
Query: 313 AFLRKYSITHKVATPYHPQTSGQVEVSNREIKSILEKTVRPDRKDWSL 170
+ ++KY ITHKVATPYHPQTSGQVE++NREIK ILEKTV P+RKDWSL
Sbjct: 1034 SLMKKYGITHKVATPYHPQTSGQVELANREIKQILEKTVNPNRKDWSL 1081
>gb|ABG37657.1| integrase [Populus trichocarpa]
Length = 1738
Score = 86.3 bits (212), Expect = 4e-15
Identities = 38/48 (79%), Positives = 44/48 (91%)
Frame = -1
Query: 313 AFLRKYSITHKVATPYHPQTSGQVEVSNREIKSILEKTVRPDRKDWSL 170
+ ++KY ITHKVATPYHPQTSGQVE++NREIK ILEKTV P+RKDWSL
Sbjct: 886 SLMKKYGITHKVATPYHPQTSGQVELANREIKQILEKTVNPNRKDWSL 933
>gb|ABG37671.1| integrase [Populus trichocarpa]
Length = 1332
Score = 85.9 bits (211), Expect = 5e-15
Identities = 37/48 (77%), Positives = 44/48 (91%)
Frame = -1
Query: 313 AFLRKYSITHKVATPYHPQTSGQVEVSNREIKSILEKTVRPDRKDWSL 170
+ ++KY ITHKVATPYHPQTSGQ+E++NREIK ILEKTV P+RKDWSL
Sbjct: 973 SLMKKYGITHKVATPYHPQTSGQIELANREIKQILEKTVNPNRKDWSL 1020
>gb|ABD63142.1| Retrotransposon gag protein [Asparagus officinalis]
Length = 1788
Score = 83.2 bits (204), Expect = 3e-14
Identities = 37/48 (77%), Positives = 44/48 (91%)
Frame = -1
Query: 313 AFLRKYSITHKVATPYHPQTSGQVEVSNREIKSILEKTVRPDRKDWSL 170
A +RKYSITHK++TPYHPQTSGQVEV+NR+IK ILEKTV +RKDWS+
Sbjct: 1500 ALMRKYSITHKLSTPYHPQTSGQVEVTNRQIKQILEKTVNHNRKDWSV 1547
>gb|ABG37656.1| integrase [Populus trichocarpa]
Length = 694
Score = 82.8 bits (203), Expect = 4e-14
Identities = 36/46 (78%), Positives = 42/46 (91%)
Frame = -1
Query: 307 LRKYSITHKVATPYHPQTSGQVEVSNREIKSILEKTVRPDRKDWSL 170
++KY ITHK ATPYHPQTSGQVE++NREIK ILEKT+ P+RKDWSL
Sbjct: 326 MKKYGITHKFATPYHPQTSGQVELANREIKQILEKTMNPNRKDWSL 371
>gb|ABG37670.1| integrase [Populus trichocarpa]
Length = 649
Score = 82.0 bits (201), Expect = 7e-14
Identities = 36/48 (75%), Positives = 43/48 (89%)
Frame = -1
Query: 313 AFLRKYSITHKVATPYHPQTSGQVEVSNREIKSILEKTVRPDRKDWSL 170
+ ++KY ITHKVATPYHPQTSGQVE++N+EIK ILEKTV P+ KDWSL
Sbjct: 285 SLMKKYGITHKVATPYHPQTSGQVELANKEIKQILEKTVNPNWKDWSL 332
>gb|ABG37655.1| integrase [Populus trichocarpa]
Length = 1263
Score = 79.3 bits (194), Expect = 5e-13
Identities = 34/45 (75%), Positives = 41/45 (91%)
Frame = -1
Query: 304 RKYSITHKVATPYHPQTSGQVEVSNREIKSILEKTVRPDRKDWSL 170
+KY ITHKV TPYHPQTSGQVE++N++IK ILEKTV P++KDWSL
Sbjct: 1213 KKYGITHKVVTPYHPQTSGQVELANKKIKQILEKTVNPNQKDWSL 1257
>gb|ABG37654.1| integrase [Populus trichocarpa]
Length = 1136
Score = 79.3 bits (194), Expect = 5e-13
Identities = 36/48 (75%), Positives = 42/48 (87%)
Frame = -1
Query: 313 AFLRKYSITHKVATPYHPQTSGQVEVSNREIKSILEKTVRPDRKDWSL 170
+ ++KY ITHKV TPYHPQTSGQVE++NREIK ILEKTV P+RKD SL
Sbjct: 357 SLMKKYRITHKVVTPYHPQTSGQVELANREIKQILEKTVNPNRKDLSL 404
>gb|AAQ82031.1| pol [Pisum sativum]
Length = 237
Score = 79.3 bits (194), Expect = 5e-13
Identities = 36/46 (78%), Positives = 39/46 (84%)
Frame = -1
Query: 307 LRKYSITHKVATPYHPQTSGQVEVSNREIKSILEKTVRPDRKDWSL 170
L KY + H++ATPYHPQTSGQVEVSNREIK ILEKTV RKDWSL
Sbjct: 12 LLKYGVRHRIATPYHPQTSGQVEVSNREIKQILEKTVATSRKDWSL 57
>ref|XP_006584374.1| PREDICTED: uncharacterized protein LOC102669941, partial [Glycine
max]
Length = 305
Score = 78.6 bits (192), Expect = 8e-13
Identities = 33/47 (70%), Positives = 40/47 (85%)
Frame = -1
Query: 313 AFLRKYSITHKVATPYHPQTSGQVEVSNREIKSILEKTVRPDRKDWS 173
A L+KY + H+V+TPYHPQT+GQ E+SNREIK ILEK V+P RKDWS
Sbjct: 8 ALLKKYGVVHRVSTPYHPQTNGQAEISNREIKRILEKIVQPSRKDWS 54
>gb|AAD23707.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 466
Score = 77.4 bits (189), Expect = 2e-12
Identities = 35/45 (77%), Positives = 40/45 (88%)
Frame = -1
Query: 307 LRKYSITHKVATPYHPQTSGQVEVSNREIKSILEKTVRPDRKDWS 173
L+K+ + HKVATPYHPQTSGQVE+SNREIK+ILEKTV RKDWS
Sbjct: 247 LKKHGVKHKVATPYHPQTSGQVEISNREIKTILEKTVGITRKDWS 291
>emb|CAN65053.1| hypothetical protein VITISV_033133 [Vitis vinifera]
Length = 1897
Score = 77.0 bits (188), Expect = 2e-12
Identities = 35/48 (72%), Positives = 40/48 (83%)
Frame = -1
Query: 313 AFLRKYSITHKVATPYHPQTSGQVEVSNREIKSILEKTVRPDRKDWSL 170
A L KY + HKVATPYHPQTSGQVE+SNREIK+IL K V +RKDWS+
Sbjct: 1517 ALLAKYGVKHKVATPYHPQTSGQVELSNREIKNILMKVVNTNRKDWSV 1564
>emb|CAN73583.1| hypothetical protein VITISV_038273 [Vitis vinifera]
Length = 2578
Score = 77.0 bits (188), Expect = 2e-12
Identities = 39/66 (59%), Positives = 48/66 (72%), Gaps = 2/66 (3%)
Frame = -1
Query: 307 LRKYSITHKVATPYHPQTSGQVEVSNREIKSILEKTVRPDRKDWSLYGDKIY*SP--VVY 134
L KY + HKVATPYHPQTSGQVE++NREIK+IL K V +RKDW+ Y + SP +VY
Sbjct: 2370 LAKYGVKHKVATPYHPQTSGQVELANREIKNILMKVVNVNRKDWTAYKTILGMSPYRLVY 2429
Query: 133 *QQVHL 116
+ HL
Sbjct: 2430 GKACHL 2435
>ref|XP_002267531.2| PREDICTED: uncharacterized protein LOC100266428 [Vitis vinifera]
Length = 1907
Score = 76.6 bits (187), Expect = 3e-12
Identities = 34/47 (72%), Positives = 40/47 (85%)
Frame = -1
Query: 310 FLRKYSITHKVATPYHPQTSGQVEVSNREIKSILEKTVRPDRKDWSL 170
FL +Y + HKVATPYHPQTSGQVE++NREIKSIL K V +RKDW+L
Sbjct: 1436 FLARYGVKHKVATPYHPQTSGQVELANREIKSILMKVVNANRKDWAL 1482
>emb|CAN64594.1| hypothetical protein VITISV_035062 [Vitis vinifera]
Length = 429
Score = 76.6 bits (187), Expect = 3e-12
Identities = 34/47 (72%), Positives = 40/47 (85%)
Frame = -1
Query: 310 FLRKYSITHKVATPYHPQTSGQVEVSNREIKSILEKTVRPDRKDWSL 170
FL KY + HKVATPYHPQTSGQVE++NREIK+IL K V +RKDWS+
Sbjct: 128 FLAKYGVKHKVATPYHPQTSGQVELANREIKNILMKVVNVNRKDWSI 174
>ref|XP_006575971.1| PREDICTED: uncharacterized protein LOC102659921, partial [Glycine
max]
Length = 318
Score = 76.3 bits (186), Expect = 4e-12
Identities = 32/47 (68%), Positives = 40/47 (85%)
Frame = -1
Query: 313 AFLRKYSITHKVATPYHPQTSGQVEVSNREIKSILEKTVRPDRKDWS 173
A L+KY + HK++TPYHPQT+GQ E+SNREIK ILEK V+P+ KDWS
Sbjct: 230 ALLKKYGVMHKISTPYHPQTNGQAEISNREIKRILEKIVQPNIKDWS 276
>emb|CAN78799.1| hypothetical protein VITISV_038948 [Vitis vinifera]
Length = 1676
Score = 76.3 bits (186), Expect = 4e-12
Identities = 34/48 (70%), Positives = 40/48 (83%)
Frame = -1
Query: 313 AFLRKYSITHKVATPYHPQTSGQVEVSNREIKSILEKTVRPDRKDWSL 170
A L KY + HKVATPYHPQTSGQVE++NREIK+IL K V +RKDWS+
Sbjct: 1454 ALLSKYGVKHKVATPYHPQTSGQVELANREIKNILMKVVNSNRKDWSI 1501