BLASTX nr result

ID: Catharanthus23_contig00009320 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00009320
         (497 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006384165.1| hypothetical protein POPTR_0004s08880g [Popu...    56   6e-06
ref|XP_002337165.1| predicted protein [Populus trichocarpa]            56   6e-06
ref|XP_002317327.2| hypothetical protein POPTR_0011s08735g [Popu...    55   1e-05
ref|XP_006389161.1| hypothetical protein POPTR_0040s00204g [Popu...    55   1e-05

>ref|XP_006384165.1| hypothetical protein POPTR_0004s08880g [Populus trichocarpa]
           gi|550340628|gb|ERP61962.1| hypothetical protein
           POPTR_0004s08880g [Populus trichocarpa]
          Length = 520

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 28/64 (43%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
 Frame = +1

Query: 313 SSKPNCRQRTDLTWKYCA*MENSN---KKKVLCCEFSRKTFDGGGINRIKQYLVGAKGNI 483
           S     R RTDL W +C      +   KK  L C +  K F GGGINR KQ+L+GAKG +
Sbjct: 24  SMSSGSRGRTDLAWGHCREAPELSVGCKKTKLVCLYCAKVFAGGGINRFKQHLIGAKGEV 83

Query: 484 VSCK 495
             C+
Sbjct: 84  EQCR 87


>ref|XP_002337165.1| predicted protein [Populus trichocarpa]
          Length = 93

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 28/64 (43%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
 Frame = +1

Query: 313 SSKPNCRQRTDLTWKYCA*MENSN---KKKVLCCEFSRKTFDGGGINRIKQYLVGAKGNI 483
           S     R RTDL W +C      +   KK  L C +  K F GGGINR+KQ+L GAKG +
Sbjct: 24  SMSSGSRGRTDLAWGHCREAPELSVGCKKTKLVCLYCAKVFTGGGINRLKQHLAGAKGEV 83

Query: 484 VSCK 495
             C+
Sbjct: 84  EQCR 87


>ref|XP_002317327.2| hypothetical protein POPTR_0011s08735g [Populus trichocarpa]
           gi|550327968|gb|EEE97939.2| hypothetical protein
           POPTR_0011s08735g [Populus trichocarpa]
          Length = 619

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 28/63 (44%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
 Frame = +1

Query: 313 SSKPNCRQRTDLTWKYCA*---MENSNKKKVLCCEFSRKTFDGGGINRIKQYLVGAKGNI 483
           S+    R +TDL W +C     +    KK  L C +  K F GGGINR KQYL GAKG +
Sbjct: 26  STSSGIRGKTDLAWGHCREALELSVGCKKTKLVCLYCAKVFAGGGINRFKQYLAGAKGEV 85

Query: 484 VSC 492
             C
Sbjct: 86  EQC 88


>ref|XP_006389161.1| hypothetical protein POPTR_0040s00204g [Populus trichocarpa]
           gi|550311826|gb|ERP48075.1| hypothetical protein
           POPTR_0040s00204g [Populus trichocarpa]
          Length = 275

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 28/63 (44%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
 Frame = +1

Query: 313 SSKPNCRQRTDLTWKYCA*---MENSNKKKVLCCEFSRKTFDGGGINRIKQYLVGAKGNI 483
           S+    R +TDL W +C     +    KK  L C +  K F GGGINR KQYL GAKG +
Sbjct: 26  STSSGIRGKTDLAWGHCREALELSVGCKKTKLVCLYCAKVFAGGGINRFKQYLAGAKGEV 85

Query: 484 VSC 492
             C
Sbjct: 86  EQC 88


Top