BLASTX nr result

ID: Catharanthus23_contig00009302 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00009302
         (558 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004245555.1| PREDICTED: GDT1-like protein 1, chloroplasti...    62   7e-08
gb|EPS59907.1| hypothetical protein M569_14900, partial [Genlise...    57   4e-06
ref|XP_004173588.1| PREDICTED: GDT1-like protein 1, chloroplasti...    56   7e-06
ref|XP_004143960.1| PREDICTED: GDT1-like protein 1, chloroplasti...    56   7e-06

>ref|XP_004245555.1| PREDICTED: GDT1-like protein 1, chloroplastic-like [Solanum
           lycopersicum]
          Length = 362

 Score = 62.4 bits (150), Expect = 7e-08
 Identities = 47/138 (34%), Positives = 65/138 (47%), Gaps = 14/138 (10%)
 Frame = +2

Query: 185 LYKPFCSNQNIVFLRKQNVEINYGSYGHFLCKVFDKSEG--------------SLRTSKC 322
           L+KP  +  N   +      I+  S  H LCK    SE                 R++ C
Sbjct: 14  LFKPSFALSNFSPVNPSLTAISRFSRRHSLCKQHGWSEDFPKVVRTRNYKRCHMTRSAYC 73

Query: 323 NEECIISEKTTSFTMRRRKGTNFSNFQDPIMPFQNQLKFWTLCGFLSLQGSQQALAGSDI 502
           +EEC I+ KT    + +RK  + S  Q   MP  N LK   L G  +L  +QQA A S++
Sbjct: 74  DEECSITNKTA---LSKRKNQSTSVLQVLDMPENNYLKSIVLSGLFTLLFTQQASAASEV 130

Query: 503 SSQLQSMASLGDLGDIST 556
           ++ LQS    GDLGD+ST
Sbjct: 131 ATGLQSFPFFGDLGDLST 148


>gb|EPS59907.1| hypothetical protein M569_14900, partial [Genlisea aurea]
          Length = 87

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 28/57 (49%), Positives = 39/57 (68%)
 Frame = +2

Query: 386 NFSNFQDPIMPFQNQLKFWTLCGFLSLQGSQQALAGSDISSQLQSMASLGDLGDIST 556
           N ++F + +    + LK   LCGF +LQ +QQA AG D++S LQ+ + LGDLGDIST
Sbjct: 10  NKTDFCNQVCTKPHHLKLLLLCGFFTLQTTQQATAGVDVASNLQAFSFLGDLGDIST 66


>ref|XP_004173588.1| PREDICTED: GDT1-like protein 1, chloroplastic-like, partial
           [Cucumis sativus]
          Length = 234

 Score = 55.8 bits (133), Expect = 7e-06
 Identities = 40/113 (35%), Positives = 55/113 (48%), Gaps = 1/113 (0%)
 Frame = +2

Query: 221 FLRKQNVEINYGSYGHFLCKVFDKSEGSLRTSKCNEECIISEKTTS-FTMRRRKGTNFSN 397
           + RK  V   Y  +       +   E S R+    + C   EK  + ++       N  N
Sbjct: 14  YWRKTEVVSKYYDHQEPCHHDYSSREVSTRSITILDNCRAPEKPLAKYSSAEGIHENTDN 73

Query: 398 FQDPIMPFQNQLKFWTLCGFLSLQGSQQALAGSDISSQLQSMASLGDLGDIST 556
            +   +   + LKF  L GF  LQ SQ ALAGSD+++ LQS+  LGDLGDIST
Sbjct: 74  QKSSSIFSSSFLKFMLLSGFFILQDSQHALAGSDVATGLQSVPLLGDLGDIST 126


>ref|XP_004143960.1| PREDICTED: GDT1-like protein 1, chloroplastic-like, partial
           [Cucumis sativus]
          Length = 342

 Score = 55.8 bits (133), Expect = 7e-06
 Identities = 40/113 (35%), Positives = 55/113 (48%), Gaps = 1/113 (0%)
 Frame = +2

Query: 221 FLRKQNVEINYGSYGHFLCKVFDKSEGSLRTSKCNEECIISEKTTS-FTMRRRKGTNFSN 397
           + RK  V   Y  +       +   E S R+    + C   EK  + ++       N  N
Sbjct: 16  YWRKTEVVSKYYDHQEPCHHDYSSREVSTRSITILDNCRAPEKPLAKYSSAEGIHENTDN 75

Query: 398 FQDPIMPFQNQLKFWTLCGFLSLQGSQQALAGSDISSQLQSMASLGDLGDIST 556
            +   +   + LKF  L GF  LQ SQ ALAGSD+++ LQS+  LGDLGDIST
Sbjct: 76  QKSSSIFSSSFLKFMLLSGFFILQDSQHALAGSDVATGLQSVPLLGDLGDIST 128