BLASTX nr result
ID: Catharanthus23_contig00009256
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00009256
(446 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAA11475.1| omega-3 fatty acid desaturase [Nicotiana tabacum... 79 5e-13
sp|P48620.1|FAD3C_SESIN RecName: Full=Omega-3 fatty acid desatur... 77 2e-12
gb|AGQ56866.1| omega-3 fatty acid desaturase [Camellia sinensis] 74 2e-11
gb|AFX68461.1| chloroplast omega-3 fatty acid desaturase [Olea e... 73 3e-11
gb|ADZ39686.1| chloroplast omega-3 fatty acid desaturase [Olea e... 73 3e-11
gb|ABG88131.1| chloroplast omega-3 fatty acid desaturase [Olea e... 73 3e-11
dbj|BAF30809.1| omega-3-desaturase [Eustoma grandiflorum] 70 3e-10
gb|AGJ70389.1| omega-3 fatty acid desaturase [Perilla frutescens] 69 6e-10
gb|AAB39387.1| omega-3 fatty acid desaturase [Perilla frutescens] 69 6e-10
emb|CBI22803.3| unnamed protein product [Vitis vinifera] 64 2e-08
ref|XP_002264350.1| PREDICTED: omega-3 fatty acid desaturase, ch... 64 2e-08
emb|CAN80104.1| hypothetical protein VITISV_040344 [Vitis vinifera] 64 2e-08
ref|XP_002312163.2| chloroplast omega-3 desaturase family protei... 62 8e-08
gb|AGC51776.1| fatty acid desaturase [Manihot esculenta] 62 1e-07
emb|CBI25467.3| unnamed protein product [Vitis vinifera] 61 1e-07
ref|XP_002273774.1| PREDICTED: omega-3 fatty acid desaturase, ch... 61 1e-07
ref|XP_006338832.1| PREDICTED: omega-3 fatty acid desaturase, ch... 61 2e-07
ref|XP_002309146.1| omega-3 desaturase family protein [Populus t... 60 2e-07
ref|XP_002315154.2| hypothetical protein POPTR_0010s19510g [Popu... 60 3e-07
gb|EXB88400.1| Omega-3 fatty acid desaturase [Morus notabilis] 60 4e-07
>dbj|BAA11475.1| omega-3 fatty acid desaturase [Nicotiana tabacum]
gi|21668486|dbj|BAC01274.1| plastid omega-3 fatty acid
desaturase [Nicotiana tabacum]
Length = 441
Score = 79.3 bits (194), Expect = 5e-13
Identities = 36/66 (54%), Positives = 45/66 (68%)
Frame = +3
Query: 249 MASWVLSECGIRPLPKFYPKPKTGLTNLNASSCRLRVPKLDLGXXXXXXXXXLKERNWAL 428
MASWVLSECG+RPLP+ YPKP+TG +S +LR+ + DL KERNWAL
Sbjct: 1 MASWVLSECGLRPLPRIYPKPRTGAATSASSHIKLRISRTDLSGSAISLSNTNKERNWAL 60
Query: 429 KVSAPV 446
+VSAP+
Sbjct: 61 RVSAPL 66
>sp|P48620.1|FAD3C_SESIN RecName: Full=Omega-3 fatty acid desaturase, chloroplastic; Flags:
Precursor gi|870784|gb|AAA70334.1| omega-3 fatty acid
desaturase [Sesamum indicum]
Length = 447
Score = 77.0 bits (188), Expect = 2e-12
Identities = 37/68 (54%), Positives = 48/68 (70%), Gaps = 2/68 (2%)
Frame = +3
Query: 249 MASWVLSECGIRPLPKFYPKPKTGLTNLNASSCRLRVPKLDL--GXXXXXXXXXLKERNW 422
MASWVLSECG+RPLP+ YPKP+TG LN++ +LR + DL G L+E+NW
Sbjct: 1 MASWVLSECGLRPLPRVYPKPRTGHPLLNSNPTKLRFSRTDLGNGSSFCLSSGILREKNW 60
Query: 423 ALKVSAPV 446
AL+VSAP+
Sbjct: 61 ALRVSAPL 68
>gb|AGQ56866.1| omega-3 fatty acid desaturase [Camellia sinensis]
Length = 452
Score = 73.9 bits (180), Expect = 2e-11
Identities = 34/68 (50%), Positives = 47/68 (69%), Gaps = 2/68 (2%)
Frame = +3
Query: 249 MASWVLSECGIRPLPKFYPKPKTGLTNLNASSCRLRVPKLD--LGXXXXXXXXXLKERNW 422
MASWVLSECG+RPLP+ YPKP+TGLT+LNA+ ++++ + D +ERNW
Sbjct: 1 MASWVLSECGLRPLPRIYPKPRTGLTSLNANPSKIKLIQSDPVCSSSFWVSSSGSRERNW 60
Query: 423 ALKVSAPV 446
+KVS P+
Sbjct: 61 KIKVSTPL 68
>gb|AFX68461.1| chloroplast omega-3 fatty acid desaturase [Olea europaea]
Length = 436
Score = 73.2 bits (178), Expect = 3e-11
Identities = 32/66 (48%), Positives = 44/66 (66%)
Frame = +3
Query: 249 MASWVLSECGIRPLPKFYPKPKTGLTNLNASSCRLRVPKLDLGXXXXXXXXXLKERNWAL 428
MASWVLSECG++PLP+FY KP+TG LN++ ++R+ + +ERNW L
Sbjct: 1 MASWVLSECGLKPLPRFYAKPRTGQAFLNSNPSKVRISRTSGNDYSFSLSSGFRERNWGL 60
Query: 429 KVSAPV 446
KVSAP+
Sbjct: 61 KVSAPL 66
>gb|ADZ39686.1| chloroplast omega-3 fatty acid desaturase [Olea europaea subsp.
europaea]
Length = 401
Score = 73.2 bits (178), Expect = 3e-11
Identities = 32/66 (48%), Positives = 44/66 (66%)
Frame = +3
Query: 249 MASWVLSECGIRPLPKFYPKPKTGLTNLNASSCRLRVPKLDLGXXXXXXXXXLKERNWAL 428
MASWVLSECG++PLP+FY KP+TG LN++ ++R+ + +ERNW L
Sbjct: 1 MASWVLSECGLKPLPRFYAKPRTGQAFLNSNPSKVRISRTSGNGYSFSLSSGFRERNWGL 60
Query: 429 KVSAPV 446
KVSAP+
Sbjct: 61 KVSAPL 66
>gb|ABG88131.1| chloroplast omega-3 fatty acid desaturase [Olea europaea]
Length = 436
Score = 73.2 bits (178), Expect = 3e-11
Identities = 32/66 (48%), Positives = 44/66 (66%)
Frame = +3
Query: 249 MASWVLSECGIRPLPKFYPKPKTGLTNLNASSCRLRVPKLDLGXXXXXXXXXLKERNWAL 428
MASWVLSECG++PLP+FY KP+TG LN++ ++R+ + +ERNW L
Sbjct: 1 MASWVLSECGLKPLPRFYAKPRTGQAFLNSNPSKVRISRTSGNDYSFSLSSGFRERNWGL 60
Query: 429 KVSAPV 446
KVSAP+
Sbjct: 61 KVSAPL 66
>dbj|BAF30809.1| omega-3-desaturase [Eustoma grandiflorum]
Length = 434
Score = 70.1 bits (170), Expect = 3e-10
Identities = 39/68 (57%), Positives = 47/68 (69%), Gaps = 2/68 (2%)
Frame = +3
Query: 249 MASWVLSECGIRPLP-KFYPKPKTGLTNLNAS-SCRLRVPKLDLGXXXXXXXXXLKERNW 422
MASWVLSECG+RPLP + YPKP+TGLT NA+ +P+LDL LK+RN+
Sbjct: 1 MASWVLSECGLRPLPQRIYPKPRTGLTTFNATLPSNKSLPRLDL-----FTSYGLKKRNF 55
Query: 423 ALKVSAPV 446
LKVSAPV
Sbjct: 56 GLKVSAPV 63
>gb|AGJ70389.1| omega-3 fatty acid desaturase [Perilla frutescens]
Length = 438
Score = 68.9 bits (167), Expect = 6e-10
Identities = 33/66 (50%), Positives = 43/66 (65%)
Frame = +3
Query: 249 MASWVLSECGIRPLPKFYPKPKTGLTNLNASSCRLRVPKLDLGXXXXXXXXXLKERNWAL 428
MASWVLSECG+RPLP+ YPKP+TG N++ +LR+ + +ERNW L
Sbjct: 1 MASWVLSECGLRPLPRIYPKPRTGQYLSNSNPSKLRLSRTGFSSDSSFSLVG-RERNWGL 59
Query: 429 KVSAPV 446
KVSAP+
Sbjct: 60 KVSAPL 65
>gb|AAB39387.1| omega-3 fatty acid desaturase [Perilla frutescens]
Length = 438
Score = 68.9 bits (167), Expect = 6e-10
Identities = 33/66 (50%), Positives = 43/66 (65%)
Frame = +3
Query: 249 MASWVLSECGIRPLPKFYPKPKTGLTNLNASSCRLRVPKLDLGXXXXXXXXXLKERNWAL 428
MASWVLSECG+RPLP+ YPKP+TG N++ +LR+ + +ERNW L
Sbjct: 1 MASWVLSECGLRPLPRIYPKPRTGQYLSNSNPSKLRLSRTGFSSDSSFSLVG-RERNWGL 59
Query: 429 KVSAPV 446
KVSAP+
Sbjct: 60 KVSAPL 65
>emb|CBI22803.3| unnamed protein product [Vitis vinifera]
Length = 439
Score = 63.9 bits (154), Expect = 2e-08
Identities = 37/72 (51%), Positives = 45/72 (62%), Gaps = 6/72 (8%)
Frame = +3
Query: 249 MASWVLSECGIRPLPKFYPKPKTG-LTNLNASSCRLRV-----PKLDLGXXXXXXXXXLK 410
MASWVLSECGIRPLP+ Y +P+TG ++N + R+R K DL K
Sbjct: 1 MASWVLSECGIRPLPQIYTRPRTGHISNSKNNHSRIRFFHSNQSKTDL--KFREPIGCSK 58
Query: 411 ERNWALKVSAPV 446
ERNWALKVSAP+
Sbjct: 59 ERNWALKVSAPL 70
>ref|XP_002264350.1| PREDICTED: omega-3 fatty acid desaturase, chloroplastic [Vitis
vinifera]
Length = 452
Score = 63.9 bits (154), Expect = 2e-08
Identities = 37/72 (51%), Positives = 45/72 (62%), Gaps = 6/72 (8%)
Frame = +3
Query: 249 MASWVLSECGIRPLPKFYPKPKTG-LTNLNASSCRLRV-----PKLDLGXXXXXXXXXLK 410
MASWVLSECGIRPLP+ Y +P+TG ++N + R+R K DL K
Sbjct: 1 MASWVLSECGIRPLPQIYTRPRTGHISNSKNNHSRIRFFHSNQSKTDL--KFREPIGCSK 58
Query: 411 ERNWALKVSAPV 446
ERNWALKVSAP+
Sbjct: 59 ERNWALKVSAPL 70
>emb|CAN80104.1| hypothetical protein VITISV_040344 [Vitis vinifera]
Length = 452
Score = 63.9 bits (154), Expect = 2e-08
Identities = 37/72 (51%), Positives = 45/72 (62%), Gaps = 6/72 (8%)
Frame = +3
Query: 249 MASWVLSECGIRPLPKFYPKPKTG-LTNLNASSCRLRV-----PKLDLGXXXXXXXXXLK 410
MASWVLSECGIRPLP+ Y +P+TG ++N + R+R K DL K
Sbjct: 1 MASWVLSECGIRPLPQIYTRPRTGHISNSKNNHSRIRFFHSNQSKTDL--KFREPIGCSK 58
Query: 411 ERNWALKVSAPV 446
ERNWALKVSAP+
Sbjct: 59 ERNWALKVSAPL 70
>ref|XP_002312163.2| chloroplast omega-3 desaturase family protein [Populus trichocarpa]
gi|550332575|gb|EEE89530.2| chloroplast omega-3
desaturase family protein [Populus trichocarpa]
Length = 451
Score = 62.0 bits (149), Expect = 8e-08
Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 4/70 (5%)
Frame = +3
Query: 249 MASWVLSECGIRPLPKFYPKPKTGLTNLNASSCRLR----VPKLDLGXXXXXXXXXLKER 416
MASWVLSECG+RPLP+ YP+ +TGLT+ + + +LR +LG ++R
Sbjct: 1 MASWVLSECGLRPLPRIYPQSRTGLTSKSTNLLKLRQSPDSKSCNLGSPFKVSSCS-RQR 59
Query: 417 NWALKVSAPV 446
NWAL V+ PV
Sbjct: 60 NWALNVAVPV 69
>gb|AGC51776.1| fatty acid desaturase [Manihot esculenta]
Length = 453
Score = 61.6 bits (148), Expect = 1e-07
Identities = 32/69 (46%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Frame = +3
Query: 252 ASWVLSECGIRPLPKFYPKPKTGLTNLNASSCRLRVPKL----DLGXXXXXXXXXLKERN 419
ASWVLSECG+ PLP+ YP+P+TG + N + +LR + +LG K+RN
Sbjct: 3 ASWVLSECGLSPLPRIYPQPRTGFASKNTNLLKLRPLPVSTSHNLGSSFKVSSWS-KQRN 61
Query: 420 WALKVSAPV 446
WAL V+APV
Sbjct: 62 WALNVAAPV 70
>emb|CBI25467.3| unnamed protein product [Vitis vinifera]
Length = 449
Score = 61.2 bits (147), Expect = 1e-07
Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Frame = +3
Query: 249 MASWVLSECGIRPLPKFYPKPKTGLTNLNASSCRLR-VPKLDLG-XXXXXXXXXLKERNW 422
MASWV+SECG+RPLP+ YP+P+TG+++ S + R +P G + R W
Sbjct: 1 MASWVVSECGLRPLPRIYPRPRTGISSTETSQLKCRALPLCKNGKAPSLWVSGGSRSREW 60
Query: 423 ALKVSAPV 446
LKVSAP+
Sbjct: 61 GLKVSAPL 68
>ref|XP_002273774.1| PREDICTED: omega-3 fatty acid desaturase, chloroplastic [Vitis
vinifera]
Length = 456
Score = 61.2 bits (147), Expect = 1e-07
Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Frame = +3
Query: 249 MASWVLSECGIRPLPKFYPKPKTGLTNLNASSCRLR-VPKLDLG-XXXXXXXXXLKERNW 422
MASWV+SECG+RPLP+ YP+P+TG+++ S + R +P G + R W
Sbjct: 1 MASWVVSECGLRPLPRIYPRPRTGISSTETSQLKCRALPLCKNGKAPSLWVSGGSRSREW 60
Query: 423 ALKVSAPV 446
LKVSAP+
Sbjct: 61 GLKVSAPL 68
>ref|XP_006338832.1| PREDICTED: omega-3 fatty acid desaturase, chloroplastic-like
[Solanum tuberosum]
Length = 432
Score = 60.8 bits (146), Expect = 2e-07
Identities = 32/67 (47%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Frame = +3
Query: 249 MASWVLSECGIRPLPKFYPKPKTGLTNLNASSCRLRVPKLDLGXXXXXXXXXLKERN-WA 425
MASWVLSECG+RPLP+ YPKP+ GL+++ A++ LR +RN WA
Sbjct: 1 MASWVLSECGLRPLPRIYPKPRIGLSSVCATNLNLR---------RISPSPIRTDRNCWA 51
Query: 426 LKVSAPV 446
L+VSAP+
Sbjct: 52 LRVSAPL 58
>ref|XP_002309146.1| omega-3 desaturase family protein [Populus trichocarpa]
gi|222855122|gb|EEE92669.1| omega-3 desaturase family
protein [Populus trichocarpa]
Length = 451
Score = 60.5 bits (145), Expect = 2e-07
Identities = 32/70 (45%), Positives = 42/70 (60%), Gaps = 5/70 (7%)
Frame = +3
Query: 249 MASWVLSECGIRPLPKFYPKPKTGLTNLNASSCRL-----RVPKLDLGXXXXXXXXXLKE 413
MASWVLSECG++PLP+F+P+P+TG+ +N S R + L +E
Sbjct: 1 MASWVLSECGLKPLPQFWPRPRTGI--INPSKPRFLYTNRTLTDLKRLPFDKFSRGCFRE 58
Query: 414 RNWALKVSAP 443
RNW LKVSAP
Sbjct: 59 RNWGLKVSAP 68
>ref|XP_002315154.2| hypothetical protein POPTR_0010s19510g [Populus trichocarpa]
gi|566191672|ref|XP_006378657.1| chloroplast omega-3
desaturase family protein [Populus trichocarpa]
gi|550330163|gb|EEF01325.2| hypothetical protein
POPTR_0010s19510g [Populus trichocarpa]
gi|550330164|gb|ERP56454.1| chloroplast omega-3
desaturase family protein [Populus trichocarpa]
Length = 451
Score = 60.1 bits (144), Expect = 3e-07
Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 4/70 (5%)
Frame = +3
Query: 249 MASWVLSECGIRPLPKFYPKPKTGLTNLNASSCRLRVPKL----DLGXXXXXXXXXLKER 416
MASWVLSECG+RPLP+ Y + +TGLT+ + ++R P + +LG ++R
Sbjct: 1 MASWVLSECGLRPLPRVYHQSRTGLTSKTTNLLKIRQPPVSKSYNLGSSFKVSSWS-RQR 59
Query: 417 NWALKVSAPV 446
NWAL V+ PV
Sbjct: 60 NWALNVAIPV 69
>gb|EXB88400.1| Omega-3 fatty acid desaturase [Morus notabilis]
Length = 442
Score = 59.7 bits (143), Expect = 4e-07
Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Frame = +3
Query: 249 MASWVLSECGIRPLPK-FYPKPKTGLTNLNASSCRLR-VPKLDLGXXXXXXXXXLKERNW 422
MASWVLSECG++PLP+ YPKP+ G+ + S +R + + +KE+NW
Sbjct: 1 MASWVLSECGVKPLPRILYPKPRNGMLSKTIISSSIRPILSNNKSLGFSLGSSPIKEKNW 60
Query: 423 ALKVSAPV 446
AL VSAP+
Sbjct: 61 ALNVSAPL 68