BLASTX nr result
ID: Catharanthus23_contig00009246
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00009246
(274 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006359981.1| PREDICTED: KH domain-containing protein At2g... 108 6e-22
ref|XP_004246970.1| PREDICTED: KH domain-containing protein At2g... 108 6e-22
ref|XP_004302513.1| PREDICTED: KH domain-containing protein At2g... 105 6e-21
gb|EOY04387.1| RNA-binding KH domain-containing protein [Theobro... 103 2e-20
gb|EMJ06890.1| hypothetical protein PRUPE_ppa009701mg [Prunus pe... 103 2e-20
ref|XP_002531808.1| conserved hypothetical protein [Ricinus comm... 103 2e-20
ref|XP_006407758.1| hypothetical protein EUTSA_v10021281mg [Eutr... 103 3e-20
ref|XP_006362335.1| PREDICTED: KH domain-containing protein At3g... 102 4e-20
ref|XP_004249027.1| PREDICTED: KH domain-containing protein At2g... 102 4e-20
ref|XP_004170718.1| PREDICTED: KH domain-containing protein At2g... 102 5e-20
ref|XP_004137670.1| PREDICTED: KH domain-containing protein At2g... 102 5e-20
ref|XP_006381265.1| hypothetical protein POPTR_0006s11210g [Popu... 102 7e-20
ref|XP_002326275.1| predicted protein [Populus trichocarpa] gi|5... 102 7e-20
ref|XP_002268790.1| PREDICTED: KH domain-containing protein At2g... 102 7e-20
ref|XP_002323686.2| KH domain-containing family protein [Populus... 101 9e-20
gb|ESW12033.1| hypothetical protein PHAVU_008G079200g [Phaseolus... 100 2e-19
ref|XP_003534621.1| PREDICTED: KH domain-containing protein At2g... 100 2e-19
ref|XP_003552330.1| PREDICTED: KH domain-containing protein At2g... 100 2e-19
ref|XP_006298282.1| hypothetical protein CARUB_v10014346mg [Caps... 100 3e-19
gb|ACU24211.1| unknown [Glycine max] 99 6e-19
>ref|XP_006359981.1| PREDICTED: KH domain-containing protein At2g38610-like [Solanum
tuberosum]
Length = 282
Score = 108 bits (271), Expect = 6e-22
Identities = 52/57 (91%), Positives = 54/57 (94%)
Frame = +1
Query: 103 MSGLYNPNFSPARAVSPQIRTTSDVESNQYLSELLAEHQKLGPFMQVLPICSRLLNQ 273
MSGLYNPNFSPARA SPQIR+T DV+SN YLSELLAEHQKLGPFMQVLPICSRLLNQ
Sbjct: 1 MSGLYNPNFSPARAASPQIRSTPDVDSNHYLSELLAEHQKLGPFMQVLPICSRLLNQ 57
>ref|XP_004246970.1| PREDICTED: KH domain-containing protein At2g38610-like [Solanum
lycopersicum]
Length = 282
Score = 108 bits (271), Expect = 6e-22
Identities = 52/57 (91%), Positives = 54/57 (94%)
Frame = +1
Query: 103 MSGLYNPNFSPARAVSPQIRTTSDVESNQYLSELLAEHQKLGPFMQVLPICSRLLNQ 273
MSGLYNPNFSPARA SPQIR+T DV+SN YLSELLAEHQKLGPFMQVLPICSRLLNQ
Sbjct: 1 MSGLYNPNFSPARAASPQIRSTPDVDSNHYLSELLAEHQKLGPFMQVLPICSRLLNQ 57
>ref|XP_004302513.1| PREDICTED: KH domain-containing protein At2g38610-like [Fragaria
vesca subsp. vesca]
Length = 282
Score = 105 bits (262), Expect = 6e-21
Identities = 53/57 (92%), Positives = 54/57 (94%)
Frame = +1
Query: 103 MSGLYNPNFSPARAVSPQIRTTSDVESNQYLSELLAEHQKLGPFMQVLPICSRLLNQ 273
MSGLYNPNFSPARA SPQIRTT DV+S QYLSELLAEHQKLGPFMQVLPICSRLLNQ
Sbjct: 1 MSGLYNPNFSPARAASPQIRTTPDVDS-QYLSELLAEHQKLGPFMQVLPICSRLLNQ 56
>gb|EOY04387.1| RNA-binding KH domain-containing protein [Theobroma cacao]
Length = 281
Score = 103 bits (258), Expect = 2e-20
Identities = 52/57 (91%), Positives = 54/57 (94%)
Frame = +1
Query: 103 MSGLYNPNFSPARAVSPQIRTTSDVESNQYLSELLAEHQKLGPFMQVLPICSRLLNQ 273
MSGLYNPNFSPARA SPQIR+T DV+S QYLSELLAEHQKLGPFMQVLPICSRLLNQ
Sbjct: 1 MSGLYNPNFSPARAASPQIRSTPDVDS-QYLSELLAEHQKLGPFMQVLPICSRLLNQ 56
>gb|EMJ06890.1| hypothetical protein PRUPE_ppa009701mg [Prunus persica]
Length = 281
Score = 103 bits (258), Expect = 2e-20
Identities = 52/57 (91%), Positives = 54/57 (94%)
Frame = +1
Query: 103 MSGLYNPNFSPARAVSPQIRTTSDVESNQYLSELLAEHQKLGPFMQVLPICSRLLNQ 273
MSGLYNPNFSPARA SPQIR+T DV+S QYLSELLAEHQKLGPFMQVLPICSRLLNQ
Sbjct: 1 MSGLYNPNFSPARAASPQIRSTPDVDS-QYLSELLAEHQKLGPFMQVLPICSRLLNQ 56
>ref|XP_002531808.1| conserved hypothetical protein [Ricinus communis]
gi|223528542|gb|EEF30565.1| conserved hypothetical
protein [Ricinus communis]
Length = 680
Score = 103 bits (258), Expect = 2e-20
Identities = 52/57 (91%), Positives = 54/57 (94%)
Frame = +1
Query: 103 MSGLYNPNFSPARAVSPQIRTTSDVESNQYLSELLAEHQKLGPFMQVLPICSRLLNQ 273
MSGLYNPNFSPARA SPQIR+T DV+S QYLSELLAEHQKLGPFMQVLPICSRLLNQ
Sbjct: 1 MSGLYNPNFSPARAASPQIRSTPDVDS-QYLSELLAEHQKLGPFMQVLPICSRLLNQ 56
>ref|XP_006407758.1| hypothetical protein EUTSA_v10021281mg [Eutrema salsugineum]
gi|557108904|gb|ESQ49211.1| hypothetical protein
EUTSA_v10021281mg [Eutrema salsugineum]
Length = 281
Score = 103 bits (256), Expect = 3e-20
Identities = 51/57 (89%), Positives = 55/57 (96%)
Frame = +1
Query: 103 MSGLYNPNFSPARAVSPQIRTTSDVESNQYLSELLAEHQKLGPFMQVLPICSRLLNQ 273
MSGLYNP+FSP+RA SPQIRTTSDV+S QYLS+LLAEHQKLGPFMQVLPICSRLLNQ
Sbjct: 1 MSGLYNPSFSPSRAASPQIRTTSDVDS-QYLSQLLAEHQKLGPFMQVLPICSRLLNQ 56
>ref|XP_006362335.1| PREDICTED: KH domain-containing protein At3g08620-like [Solanum
tuberosum]
Length = 282
Score = 102 bits (255), Expect = 4e-20
Identities = 49/57 (85%), Positives = 52/57 (91%)
Frame = +1
Query: 103 MSGLYNPNFSPARAVSPQIRTTSDVESNQYLSELLAEHQKLGPFMQVLPICSRLLNQ 273
MSGLYN NFSP+RA SPQIRT DVESNQYLSELL+EHQK+GPFMQVLPICS LLNQ
Sbjct: 1 MSGLYNHNFSPSRAASPQIRTNPDVESNQYLSELLSEHQKIGPFMQVLPICSTLLNQ 57
>ref|XP_004249027.1| PREDICTED: KH domain-containing protein At2g38610-like [Solanum
lycopersicum]
Length = 282
Score = 102 bits (255), Expect = 4e-20
Identities = 49/57 (85%), Positives = 52/57 (91%)
Frame = +1
Query: 103 MSGLYNPNFSPARAVSPQIRTTSDVESNQYLSELLAEHQKLGPFMQVLPICSRLLNQ 273
MSGLYN NFSP+RA SPQIRT DVESNQYLSELL+EHQK+GPFMQVLPICS LLNQ
Sbjct: 1 MSGLYNHNFSPSRAASPQIRTNPDVESNQYLSELLSEHQKIGPFMQVLPICSTLLNQ 57
>ref|XP_004170718.1| PREDICTED: KH domain-containing protein At2g38610-like [Cucumis
sativus]
Length = 282
Score = 102 bits (254), Expect = 5e-20
Identities = 50/57 (87%), Positives = 53/57 (92%)
Frame = +1
Query: 103 MSGLYNPNFSPARAVSPQIRTTSDVESNQYLSELLAEHQKLGPFMQVLPICSRLLNQ 273
MSGLYNPNFSPARA SPQIRT+ D +S QYLSELLAEHQKLGPFMQ+LPICSRLLNQ
Sbjct: 1 MSGLYNPNFSPARAASPQIRTSGDADS-QYLSELLAEHQKLGPFMQILPICSRLLNQ 56
>ref|XP_004137670.1| PREDICTED: KH domain-containing protein At2g38610-like [Cucumis
sativus]
Length = 351
Score = 102 bits (254), Expect = 5e-20
Identities = 50/57 (87%), Positives = 53/57 (92%)
Frame = +1
Query: 103 MSGLYNPNFSPARAVSPQIRTTSDVESNQYLSELLAEHQKLGPFMQVLPICSRLLNQ 273
MSGLYNPNFSPARA SPQIRT+ D +S QYLSELLAEHQKLGPFMQ+LPICSRLLNQ
Sbjct: 70 MSGLYNPNFSPARAASPQIRTSGDADS-QYLSELLAEHQKLGPFMQILPICSRLLNQ 125
>ref|XP_006381265.1| hypothetical protein POPTR_0006s11210g [Populus trichocarpa]
gi|550335966|gb|ERP59062.1| hypothetical protein
POPTR_0006s11210g [Populus trichocarpa]
Length = 175
Score = 102 bits (253), Expect = 7e-20
Identities = 51/57 (89%), Positives = 53/57 (92%)
Frame = +1
Query: 103 MSGLYNPNFSPARAVSPQIRTTSDVESNQYLSELLAEHQKLGPFMQVLPICSRLLNQ 273
MSGLYNPNFSPARA SPQIR+T DV+S QYLSELLAEHQKLGPFMQVLP CSRLLNQ
Sbjct: 1 MSGLYNPNFSPARAASPQIRSTPDVDS-QYLSELLAEHQKLGPFMQVLPTCSRLLNQ 56
>ref|XP_002326275.1| predicted protein [Populus trichocarpa]
gi|566175667|ref|XP_006381266.1| KH domain-containing
family protein [Populus trichocarpa]
gi|550335967|gb|ERP59063.1| KH domain-containing family
protein [Populus trichocarpa]
Length = 281
Score = 102 bits (253), Expect = 7e-20
Identities = 51/57 (89%), Positives = 53/57 (92%)
Frame = +1
Query: 103 MSGLYNPNFSPARAVSPQIRTTSDVESNQYLSELLAEHQKLGPFMQVLPICSRLLNQ 273
MSGLYNPNFSPARA SPQIR+T DV+S QYLSELLAEHQKLGPFMQVLP CSRLLNQ
Sbjct: 1 MSGLYNPNFSPARAASPQIRSTPDVDS-QYLSELLAEHQKLGPFMQVLPTCSRLLNQ 56
>ref|XP_002268790.1| PREDICTED: KH domain-containing protein At2g38610 [Vitis vinifera]
gi|296085835|emb|CBI31159.3| unnamed protein product
[Vitis vinifera]
Length = 281
Score = 102 bits (253), Expect = 7e-20
Identities = 52/57 (91%), Positives = 54/57 (94%)
Frame = +1
Query: 103 MSGLYNPNFSPARAVSPQIRTTSDVESNQYLSELLAEHQKLGPFMQVLPICSRLLNQ 273
MSGLYN NFSPARAVSPQIR+T DV+S QYLSELLAEHQKLGPFMQVLPICSRLLNQ
Sbjct: 1 MSGLYNHNFSPARAVSPQIRSTPDVDS-QYLSELLAEHQKLGPFMQVLPICSRLLNQ 56
>ref|XP_002323686.2| KH domain-containing family protein [Populus trichocarpa]
gi|550321530|gb|EEF05447.2| KH domain-containing family
protein [Populus trichocarpa]
Length = 281
Score = 101 bits (252), Expect = 9e-20
Identities = 50/57 (87%), Positives = 54/57 (94%)
Frame = +1
Query: 103 MSGLYNPNFSPARAVSPQIRTTSDVESNQYLSELLAEHQKLGPFMQVLPICSRLLNQ 273
MSGLYNP+FSPARA SPQIR+T DV+S QYLSELLAEHQKLGPFMQ+LPICSRLLNQ
Sbjct: 1 MSGLYNPSFSPARAASPQIRSTPDVDS-QYLSELLAEHQKLGPFMQILPICSRLLNQ 56
>gb|ESW12033.1| hypothetical protein PHAVU_008G079200g [Phaseolus vulgaris]
Length = 281
Score = 100 bits (249), Expect = 2e-19
Identities = 50/57 (87%), Positives = 52/57 (91%)
Frame = +1
Query: 103 MSGLYNPNFSPARAVSPQIRTTSDVESNQYLSELLAEHQKLGPFMQVLPICSRLLNQ 273
MSGLYNPNFSPARA SPQIR+ DV+S QYLSELLAEHQKLGPFMQ LPICSRLLNQ
Sbjct: 1 MSGLYNPNFSPARAASPQIRSNPDVDS-QYLSELLAEHQKLGPFMQALPICSRLLNQ 56
>ref|XP_003534621.1| PREDICTED: KH domain-containing protein At2g38610-like [Glycine
max]
Length = 281
Score = 100 bits (249), Expect = 2e-19
Identities = 50/57 (87%), Positives = 53/57 (92%)
Frame = +1
Query: 103 MSGLYNPNFSPARAVSPQIRTTSDVESNQYLSELLAEHQKLGPFMQVLPICSRLLNQ 273
MSGLYNPNFSPARA SPQIR+ +V+S QYLSELLAEHQKLGPFMQVLPICSRLLNQ
Sbjct: 1 MSGLYNPNFSPARAASPQIRSNPEVDS-QYLSELLAEHQKLGPFMQVLPICSRLLNQ 56
>ref|XP_003552330.1| PREDICTED: KH domain-containing protein At2g38610-like [Glycine
max]
Length = 281
Score = 100 bits (249), Expect = 2e-19
Identities = 50/57 (87%), Positives = 53/57 (92%)
Frame = +1
Query: 103 MSGLYNPNFSPARAVSPQIRTTSDVESNQYLSELLAEHQKLGPFMQVLPICSRLLNQ 273
MSGLYNPNFSPARA SPQIR+ +V+S QYLSELLAEHQKLGPFMQVLPICSRLLNQ
Sbjct: 1 MSGLYNPNFSPARAASPQIRSNPEVDS-QYLSELLAEHQKLGPFMQVLPICSRLLNQ 56
>ref|XP_006298282.1| hypothetical protein CARUB_v10014346mg [Capsella rubella]
gi|482566991|gb|EOA31180.1| hypothetical protein
CARUB_v10014346mg [Capsella rubella]
Length = 281
Score = 99.8 bits (247), Expect = 3e-19
Identities = 50/57 (87%), Positives = 54/57 (94%)
Frame = +1
Query: 103 MSGLYNPNFSPARAVSPQIRTTSDVESNQYLSELLAEHQKLGPFMQVLPICSRLLNQ 273
MSGLYN NFSP+RA SPQIRT+SDV+S QYLS+LLAEHQKLGPFMQVLPICSRLLNQ
Sbjct: 1 MSGLYNYNFSPSRAASPQIRTSSDVDS-QYLSQLLAEHQKLGPFMQVLPICSRLLNQ 56
>gb|ACU24211.1| unknown [Glycine max]
Length = 281
Score = 99.0 bits (245), Expect = 6e-19
Identities = 49/57 (85%), Positives = 53/57 (92%)
Frame = +1
Query: 103 MSGLYNPNFSPARAVSPQIRTTSDVESNQYLSELLAEHQKLGPFMQVLPICSRLLNQ 273
MSGLYNPNFSPARA SPQIR+ +V+S +YLSELLAEHQKLGPFMQVLPICSRLLNQ
Sbjct: 1 MSGLYNPNFSPARAASPQIRSNPEVDS-RYLSELLAEHQKLGPFMQVLPICSRLLNQ 56